Citrus Sinensis ID: 017201

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
Protein Sequence
MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Secondary Structure (PSIPRED)
ccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEccccccccccccccccccccccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccEEEccEEEEEEEccccccccEEEEccEEEEcccccccccEEEEccccccccccEEEccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccccHHHHHHccccEEccccccccccHHHHHHHHcccccccEEEEccccHHHHHHHHHHcccccEEEEEEEcccccccccccccEEEcccEEEEEEcccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEccHHHHHHHHccccccccEEccccEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccccccccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEcHHHccHHHHHHHHEEccccccccEEEEccccHHHHHHHHHHccccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHcccccEEEEEc
Coil and Loop (DISEMBL)
msnsqaitckavvcwglgeplkveeiqveppkstEVRVKMLYASVchtdilcsegfpaplyprvlghegvgvvesagdevkevkegdiviptyigeckecenctsEMTNLCLKYpialnglmldstsrmsvrgqKLYHIFScstwseymvidanyvvkvdpsidpsdasflscgfttgyGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIigidknpwkkekgkafgmtdfinpddepnkSISELVKGIThgmgvdycfectgvpslLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACggrtlkgttfggiktksdlptlldkcknkeFKLHQLLTHHVKLEEIDKAIQLlkqpdcvkvliti
Flexible Loop (DISEMBL)
msnsqaitckavvcwglgeplkveeiqveppkstEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVEsagdevkevkegdiviptyIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAkiigidknpwkkEKGKAFGMtdfinpddepnKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGgrtlkgttfggiktksdlpTLLDKCKNKEFKLHQLLTHHVKLEEIDKaiqllkqpdCVKVLITI
Low Complexity Region (SEG)
MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKgssvavlglgtvglgavdgaRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTkvgkgkvivigvgvDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Disordered region (IsUnstruct)
*****AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI*********ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI**
Disordered Region (DISOPRED)
**NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Disordered Region (DISEMBL)
MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Disordered Region (DISPRO)
***SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	375	2.2.26 [Sep-21-2011]
Q9FH04	390	Alcohol dehydrogenase-lik	yes	no	0.989	0.951	0.435	1e-87
Q9SK87	386	Alcohol dehydrogenase-lik	no	no	0.989	0.961	0.448	2e-87
A1L4Y2	394	Alcohol dehydrogenase-lik	no	no	0.989	0.941	0.445	2e-86
Q0V7W6	389	Alcohol dehydrogenase-lik	no	no	0.978	0.943	0.453	4e-86
Q9SK86	388	Alcohol dehydrogenase-lik	no	no	0.976	0.943	0.449	5e-85
Q96533	379	Alcohol dehydrogenase cla	no	no	0.976	0.965	0.437	8e-83
Q0DWH1	381	Alcohol dehydrogenase cla	no	no	0.976	0.960	0.430	6e-82
A2XAZ3	381	Alcohol dehydrogenase cla	N/A	no	0.976	0.960	0.430	6e-82
P80572	378	Alcohol dehydrogenase cla	N/A	no	0.981	0.973	0.425	5e-81
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.976	0.958	0.423	5e-81

>sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1

 Score =  323 bits (829), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 164/377 (43%), Positives = 245/377 (64%), Gaps = 6/377 (1%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPL 60
           S+ + I CKA V    GEPL +EEI V PP+  EVR++++  ++CH+D+       P   
Sbjct: 12  SSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPPAC 71

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
           +PR+LGHE +GVVES G+ VKEV EGD V+PT++ +C +C +C S  +NLC K+P  ++ 
Sbjct: 72  FPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSP 131

Query: 121 LM--LDSTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT 177
            M   D++SR + + G+ L+H  + S++SEY V+D   VVK+D SI PS A  LSCG +T
Sbjct: 132 WMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVST 191

Query: 178 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 237
           G GAAW+ AKVEKGS+V + GLG++GL   +GAR+ GA++IIG+D NP K + G+ FG+T
Sbjct: 192 GVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVT 251

Query: 238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG- 296
           +F+N        +SE++  +T G G DYCFEC G  SL+ EA    + G GK I +GV  
Sbjct: 252 EFVNSMTCEKNRVSEVINEMTDG-GADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDK 310

Query: 297 VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
             + + L+   +   G+ L G+ FGG+K K+ +P LL +  + E +L + +TH +K EEI
Sbjct: 311 PGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEI 370

Query: 357 DKAIQLLKQPDCVKVLI 373
           + A QLL +  C++ ++
Sbjct: 371 NDAFQLLLEGKCIRCVL 387

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1

 Score =  323 bits (827), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 170/379 (44%), Positives = 245/379 (64%), Gaps = 8/379 (2%)

Query: 1   MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL 60
           ++  + I CKA +    GEPL +EEIQV+PP++ EVR+K+L  S+CHTD+   +    PL
Sbjct: 6   ITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPL 65

Query: 61  --YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--I 116
             +PR+LGHE VGVVES G++V   K+GD+V+P +  +C+EC+ C S  +N C KY    
Sbjct: 66  ARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDY 125

Query: 117 ALNGLMLDSTSRM-SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 175
             N      TSR    RG+ ++H    S+++EY V+D  ++VK+ P I    A+ LSC  
Sbjct: 126 LSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSV 185

Query: 176 TTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235
            TG GAAWK A VE+GS+V + GLG VGL   +G R+ GAAKIIG+D NP K E GK FG
Sbjct: 186 ATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFG 245

Query: 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 295
           +TDF+NP     K+ISE+++ +T  +G DY FEC G+ SL+ EA ++T+ G GK IV+G+
Sbjct: 246 ITDFVNPALCGEKTISEVIREMTD-VGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGM 304

Query: 296 GVDAMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
              A+ P+++ +     GRT+ GT FGG+K K D+P L+D+   KE  L  L+TH +  E
Sbjct: 305 EQKAL-PISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFE 363

Query: 355 EIDKAIQLLKQPDCVKVLI 373
           EI+KA  LL + + ++ +I
Sbjct: 364 EINKAFHLLAEGNSIRCII 382

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|A1L4Y2|ADHL3_ARATH Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1

 Score =  319 bits (818), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 173/388 (44%), Positives = 242/388 (62%), Gaps = 17/388 (4%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAP 59
           +  + ITCKA V WG   PL ++EI V+PP+  EVRVK+LY+S+CHTD+ C  G      
Sbjct: 4   TQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAER 63

Query: 60  LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-AL 118
            +PR+LGHE VG+VES G+ VK+VKEGD VIPT+ GEC EC+ C  E +NLC +Y +  +
Sbjct: 64  AFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPM 123

Query: 119 NGLML-DSTSRMSV---------RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA 168
             +M+ D  +R S          + Q +YH  + ST++EY V+D+  VVK+DP+      
Sbjct: 124 KRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQM 183

Query: 169 SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK 228
           S LSCG +TG GAAW  A V++G S AV GLG+VGL   +GAR  GA++IIG+D N  K 
Sbjct: 184 SLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKF 243

Query: 229 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 288
           EKGK  G+TDFINP D   K + ++++ IT G GVDY FECTG   +L EA  +T VG G
Sbjct: 244 EKGKLMGVTDFINPKDL-TKPVHQMIREITGG-GVDYSFECTGNVDVLREAFLSTHVGWG 301

Query: 289 KVIVIGV-GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLL 347
             +++G+      +PL+ + L   GR + G+ FGG K KS LP    +C     KL   +
Sbjct: 302 STVLVGIYPTPRTLPLHPMELF-DGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLEPFI 360

Query: 348 THHVKLEEIDKAIQLLKQPDCVKVLITI 375
           T+ +  E+I+ A QLL+    ++ ++ I
Sbjct: 361 TNELPFEKINDAFQLLRDGKSLRCILQI 388

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1

 Score =  318 bits (815), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 170/375 (45%), Positives = 236/375 (62%), Gaps = 8/375 (2%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--YP 62
           + I CKA V    GE L +EEI V+PP++ EVR+K++  S+CHTD+  S+    PL  +P
Sbjct: 13  KPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARFP 72

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALNG 120
           R+LGHE VGV+ES G+ V   ++GD+V+P +   C+EC +C S  +N C ++      N 
Sbjct: 73  RILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNT 132

Query: 121 LMLDSTSRM-SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
                TSR     G+ +YH    S++SEY V+D  ++VK+ P I    A+ LSCG +TG 
Sbjct: 133 RRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGI 192

Query: 180 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
           GAAWK A VEKGS+VAV GLG VGL   +GAR+ GA KIIG+D NP K E GK FG TDF
Sbjct: 193 GAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTDF 252

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 299
           IN        ISE++K +T G GVDY FEC G+PSLL+EA  +T+ G GK +V+G+    
Sbjct: 253 INSTLCGENKISEVIKEMTGG-GVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGID-KH 310

Query: 300 MVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 358
           + P+++ +     GR + G+ FGG+K K D+P L+D    KE  L   +TH +K EEI+K
Sbjct: 311 LTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINK 370

Query: 359 AIQLLKQPDCVKVLI 373
           A  LL Q   ++ ++
Sbjct: 371 AFDLLVQGKSLRCIL 385

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1

 Score =  315 bits (806), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 169/376 (44%), Positives = 239/376 (63%), Gaps = 10/376 (2%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL---CSEGFPAPLY 61
           + ITCKA +C   GE L +E+I V+PP++ EVR+K+L  S+CHTD+     S G P   +
Sbjct: 12  KPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFG-PISRF 70

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALN 119
           PR+LGHE VGVVES G+ V   K+GD+V+P +   C+EC++C S  TN C +Y      N
Sbjct: 71  PRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISN 130

Query: 120 GLMLDSTSRM-SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
                  SR     G+ ++H    S++SEY V+D  ++VK+ P I    A+ LSCG +TG
Sbjct: 131 TRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTG 190

Query: 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            GAAWK A VE+GS++A+ GLG VGL   +GAR+ GAAKIIGID N  K E GK FG TD
Sbjct: 191 IGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTD 250

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
           FINP     K ISE++K +T G GVDY FEC G+ SLL+EA  +T+ G GK +++G+   
Sbjct: 251 FINPTLCGEKKISEVIKEMTEG-GVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKH 309

Query: 299 AMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
           A  P+++ +     GR + G+ FGG+K+K D+P L+D    KE  L   +TH +  +EI+
Sbjct: 310 A-APISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEIN 368

Query: 358 KAIQLLKQPDCVKVLI 373
           KA  LL++   ++ ++
Sbjct: 369 KAFALLEEGKSLRCIL 384

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2

 Score =  307 bits (787), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 166/379 (43%), Positives = 233/379 (61%), Gaps = 13/379 (3%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
           +  Q ITCKA V +   +PL +E++QV PP++ EVR+K+LY ++CHTD     G  P  L
Sbjct: 3   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL 62

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN- 119
           +P +LGHE  G+VES G+ V EV+ GD VIP Y  EC+EC+ C S  TNLC K   A   
Sbjct: 63  FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 122

Query: 120 GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
           G+M+ D  SR SV G+ +YH    ST+S+Y V+    V K+DP+        L CG  TG
Sbjct: 123 GIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTG 182

Query: 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            GA W  AKVE GS+VA+ GLGTVGL   +GA+  GA++IIGID +  K E  K FG+ +
Sbjct: 183 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE 242

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
           F+NP D  +K I E++  +T G GVDY FEC G  S++  ALE    G G  +++GV   
Sbjct: 243 FVNPKDH-DKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300

Query: 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
               +  P  ++     GR  KGT FGG K+++ +P L++K  NKE K+ + +TH++ L 
Sbjct: 301 GQEISTRPFQLVT----GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG 356

Query: 355 EIDKAIQLLKQPDCVKVLI 373
           EI+KA  LL +  C++ ++
Sbjct: 357 EINKAFDLLHEGTCLRCVL 375

Plays a central role in formaldehyde detoxification.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1

 Score =  304 bits (779), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 163/379 (43%), Positives = 231/379 (60%), Gaps = 13/379 (3%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
           +  Q ITCKA V W    P+ +E++QV PP++ EVRVK+L+ ++CHTD     G  P  L
Sbjct: 5   TQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGL 64

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN- 119
           +P +LGHE  G+VES G+ V EV+ GD VIP Y  EC+EC+ C S  TNLC K   A   
Sbjct: 65  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGV 124

Query: 120 GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
           G+M+ D  SR S+ G+ +YH    ST+S+Y V+    V K++P         L CG +TG
Sbjct: 125 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTG 184

Query: 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            GA W  AKVE GS VA+ GLGTVGL   +GA+  GA++IIGID +  K +  K FG+T+
Sbjct: 185 LGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTE 244

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
           F+NP D  +K I +++  +T G GVDY FEC G  S++  ALE    G G  +++GV   
Sbjct: 245 FVNPKDH-DKPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 302

Query: 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
               +  P  ++     GR  KGT FGG K++S +P L++K  NKE K+ + +TH + L 
Sbjct: 303 GQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLT 358

Query: 355 EIDKAIQLLKQPDCVKVLI 373
           +I+KA  LL +  C++ ++
Sbjct: 359 DINKAFDLLHEGGCLRCVL 377

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1

 Score =  304 bits (779), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 163/379 (43%), Positives = 232/379 (61%), Gaps = 13/379 (3%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
           +  Q ITCKA V W   +P+ +E++QV PP++ EVRVK+L+ ++CHTD     G  P  L
Sbjct: 5   TQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGL 64

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN- 119
           +P +LGHE  G+VES G+ V EV+ GD VIP Y  EC+EC+ C S  TNLC K   A   
Sbjct: 65  FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGV 124

Query: 120 GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
           G+M+ D  SR S+ G+ +YH    ST+S+Y V+    V K++P         L CG +TG
Sbjct: 125 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTG 184

Query: 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            GA W  AKVE GS VA+ GLGTVGL   +GA+  GA++IIGID +  K +  K FG+T+
Sbjct: 185 LGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTE 244

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
           F+NP D  +K I +++  +T G GVDY FEC G  S++  ALE    G G  +++GV   
Sbjct: 245 FVNPKDH-DKPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 302

Query: 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
               +  P  ++     GR  KGT FGG K++S +P L++K  NKE K+ + +TH + L 
Sbjct: 303 GQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLT 358

Query: 355 EIDKAIQLLKQPDCVKVLI 373
           +I+KA  LL +  C++ ++
Sbjct: 359 DINKAFDLLHEGGCLRCVL 377

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P80572|ADHX_PEA Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1

 Score =  301 bits (772), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 162/381 (42%), Positives = 230/381 (60%), Gaps = 13/381 (3%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
           +  Q ITCKA V W   +PL +E+++V PP++ EVR+++L+ ++CHTD     G  P  L
Sbjct: 2   TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGL 61

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA--L 118
           +P +LGHE  G+VES G+ V +VK GD VIP+Y  EC EC+ C S  TNLC K   A  +
Sbjct: 62  FPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGV 121

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
             +M D  SR SV+G+ +YH    ST+S+Y V+    V K+ P         L CG  TG
Sbjct: 122 GVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTG 181

Query: 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            GA W  AKVE GS VA+ GLGTVGL   +GA+  GA++IIGID +  K +  K FG+T+
Sbjct: 182 LGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTE 241

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
           FINP D   K I +++  +T G GVDY FEC G  S++  ALE    G G  +++GV   
Sbjct: 242 FINPKDH-EKPIQQVIIDLTDG-GVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAAS 299

Query: 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
               +  P  ++     GR  KGT FGG K++S +P L++K   KE K+ + +TH++ L 
Sbjct: 300 GQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLL 355

Query: 355 EIDKAIQLLKQPDCVKVLITI 375
           EI+KA  LL +  C++ ++ +
Sbjct: 356 EINKAFDLLHEGQCLRCVLAV 376

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  301 bits (771), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 160/378 (42%), Positives = 233/378 (61%), Gaps = 12/378 (3%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPR 63
           Q I CKA V W  G+PL +EE++V PP+  EVR+K+L+ S+CHTD+   E     PL+PR
Sbjct: 8   QVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPR 67

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLM 122
           + GHE  G+VES G+ V ++K GD V+P + GEC++C +C SE +N+C    I  + G+M
Sbjct: 68  IFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVM 127

Query: 123 L-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           + D  +R S  G+ +YH    ST+SEY V  +  V K+DP         LSCG +TG GA
Sbjct: 128 IHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGA 187

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
               AK  KGS+VA+ GLG VGL A +GAR+ GA++IIG+D NP +    K FG+T+F+N
Sbjct: 188 TLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVN 247

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDA 299
           P D  +K + +++  +T G GVD   ECTG  + +  A E    G G  +++GV    DA
Sbjct: 248 PKDHGDKPVQQVIAEMTDG-GVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDA 306

Query: 300 MV--PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
               P+N++      RTLKGT FG  K KSD+P+++DK   KE +L + +TH V   EI+
Sbjct: 307 FKTHPMNLL----NERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEIN 362

Query: 358 KAIQLLKQPDCVKVLITI 375
           KA   + + + ++ +IT+
Sbjct: 363 KAFDYMLKGESIRCMITM 380

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
224142703	377	predicted protein [Populus trichocarpa]	0.994	0.989	0.716	1e-155
225435026	392	PREDICTED: alcohol dehydrogenase-like 1-	0.984	0.941	0.683	1e-148
224144873	378	predicted protein [Populus trichocarpa]	0.989	0.981	0.688	1e-147
359478643	410	PREDICTED: LOW QUALITY PROTEIN: alcohol	0.989	0.904	0.686	1e-147
359478647	411	PREDICTED: LOW QUALITY PROTEIN: alcohol	0.989	0.902	0.676	1e-146
388507902	374	unknown [Lotus japonicus]	0.984	0.986	0.672	1e-145
367460047	375	alcohol dehydrogenase-like [Glycine max]	0.986	0.986	0.655	1e-144
356543227	375	PREDICTED: alcohol dehydrogenase-like 2-	0.986	0.986	0.653	1e-143
297746116	527	unnamed protein product [Vitis vinifera]	0.968	0.688	0.672	1e-143
356543237	375	PREDICTED: LOW QUALITY PROTEIN: alcohol	0.989	0.989	0.646	1e-142

>gi|224142703|ref|XP_002324694.1| predicted protein [Populus trichocarpa] gi|222866128|gb|EEF03259.1| predicted protein [Populus trichocarpa]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/374 (71%), Positives = 315/374 (84%), Gaps = 1/374 (0%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           S+SQ ITCKA VCWG+GEPLKVEEIQVEPPK +E+RVK+L AS+CHTD L ++G   PL+
Sbjct: 5   SSSQVITCKAAVCWGVGEPLKVEEIQVEPPKFSEIRVKVLCASLCHTDTLYAKGSLIPLF 64

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
           PRVLGHEGVGVVES G+ V+++KEGD+VIP Y+GEC+ECENCTS  TNLCLKYP+ LNGL
Sbjct: 65  PRVLGHEGVGVVESIGEGVRDLKEGDLVIPAYLGECQECENCTSGKTNLCLKYPLILNGL 124

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D TSRMS+ GQKLYH+ +CSTWSEYMVID NYVVK+DPSID   ASFLSCGF+TG+G+
Sbjct: 125 MPDGTSRMSINGQKLYHLITCSTWSEYMVIDTNYVVKIDPSIDLPHASFLSCGFSTGFGS 184

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           AW+EA VEKGSSVAV+GLG VGLGA++GARM GAAKIIGIDKN  K+EKG+AFGMTDFIN
Sbjct: 185 AWREANVEKGSSVAVIGLGAVGLGAIEGARMQGAAKIIGIDKNEKKREKGQAFGMTDFIN 244

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 301
           PD+  NK ISEL+K IT G+GVDYCFECTGV  L++EAL  TK GKG+  V+G G D  V
Sbjct: 245 PDEYFNKPISELIKDITGGLGVDYCFECTGVGPLINEALLATKPGKGETFVVGAGTDLTV 304

Query: 302 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 361
            +N + L CGG TLKG+ FGG+K KS LP LLDKCKNKEF L +LLTH V L++I+KA Q
Sbjct: 305 SINFLPLLCGG-TLKGSLFGGLKIKSHLPILLDKCKNKEFNLDELLTHQVMLDDINKAFQ 363

Query: 362 LLKQPDCVKVLITI 375
           LL+QPDCVKVLI +
Sbjct: 364 LLEQPDCVKVLIKM 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435026|ref|XP_002281265.1| PREDICTED: alcohol dehydrogenase-like 1-like [Vitis vinifera]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/373 (68%), Positives = 311/373 (83%), Gaps = 4/373 (1%)

Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYP 62
           ++ ITCKA VCWGLGE +KVEEIQVEPPKS+EVRVKMLYAS+CHTDI  CSE    P++P
Sbjct: 23  NEVITCKAAVCWGLGEAMKVEEIQVEPPKSSEVRVKMLYASICHTDIFYCSE-LSLPMFP 81

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
           +V GHEGVGVVES G+ V  +KEGD+VIPTY+GEC ECENC S  TN+CLK+P+   GLM
Sbjct: 82  KVPGHEGVGVVESVGENVTGLKEGDVVIPTYLGECGECENCRSPKTNVCLKHPVTFTGLM 141

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
            D TSRMS+RGQ+L+HIFSCSTW+EYMV++ANY+VK+DP I PSDASFLSCGF+TGYGAA
Sbjct: 142 PDGTSRMSIRGQRLHHIFSCSTWTEYMVVNANYLVKIDPRIAPSDASFLSCGFSTGYGAA 201

Query: 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           WK+AKVEKGSSVAVLGLG VGLG + GAR  GAA+IIGIDKN  ++E G+AFGMTDFINP
Sbjct: 202 WKDAKVEKGSSVAVLGLGAVGLGVLQGARNQGAARIIGIDKNERRREVGEAFGMTDFINP 261

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
            +E NKSISELV  +T G GVDY FECTG+PSL++EAL+ TKVGKG  +V+G+     V 
Sbjct: 262 -NESNKSISELVNELTGGQGVDYSFECTGIPSLVNEALQATKVGKGMSMVLGIANVPTVD 320

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           ++++AL   G+TLKG  FGGIK +SD+P ++DKC NK+ +L +LLTH V+LE+++KA +L
Sbjct: 321 ISLMAL-LSGKTLKGCFFGGIKVQSDIPVIVDKCINKDIQLDELLTHEVQLEDMNKAFEL 379

Query: 363 LKQPDCVKVLITI 375
           LKQPDCVKVLI I
Sbjct: 380 LKQPDCVKVLIKI 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144873|ref|XP_002325446.1| predicted protein [Populus trichocarpa] gi|222862321|gb|EEE99827.1| predicted protein [Populus trichocarpa]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/375 (68%), Positives = 308/375 (82%), Gaps = 4/375 (1%)

Query: 3   NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCS--EGFPAPL 60
           +SQ ITCKA V WG GEPLKVEEIQ+EPPKSTEVRV+MLYASVCHTD+L +  +G P PL
Sbjct: 6   SSQIITCKAAVIWGSGEPLKVEEIQIEPPKSTEVRVRMLYASVCHTDVLRARRKGDPVPL 65

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
           +PRVLGHEGVG+VES GDEV  ++EGD VIPT I EC+ CENCTS  TNLCL YP++ +G
Sbjct: 66  FPRVLGHEGVGMVESFGDEVNGLEEGDYVIPTMIAECEACENCTSANTNLCLTYPLSRSG 125

Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 180
           LMLD TSRMS+ GQKLYH+F+CSTWSEYMVID+NYV K+DPSI    AS LSCGF+TG+G
Sbjct: 126 LMLDGTSRMSINGQKLYHMFTCSTWSEYMVIDSNYVNKIDPSIPLPHASVLSCGFSTGFG 185

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
           AAWKEA+V+ GS+VAVLGLG VGLG  +GARM GAAKIIG+DKN  KK+KG AFGMTDFI
Sbjct: 186 AAWKEAQVKMGSTVAVLGLGAVGLGVTEGARMLGAAKIIGVDKNSMKKDKGLAFGMTDFI 245

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 300
           NPD+  +KSIS+++K +T GMGVDYCFEC G  SL+++A++ TK GKGK IVIG G+ + 
Sbjct: 246 NPDECSDKSISQMIKDLTGGMGVDYCFECVGAESLINQAIQATKEGKGKTIVIGGGISS- 304

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
           V ++ + L   GRTLKG+ FGG+K KSDLP L  KCKNKEF L +LLTH V L++I+KA 
Sbjct: 305 VKIDYLPL-LSGRTLKGSLFGGLKVKSDLPILFQKCKNKEFDLDELLTHEVTLQDIEKAF 363

Query: 361 QLLKQPDCVKVLITI 375
           +LL QPDCVKVLI I
Sbjct: 364 ELLNQPDCVKVLIKI 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478643|ref|XP_002281275.2| PREDICTED: LOW QUALITY PROTEIN: alcohol dehydrogenase-like 1-like [Vitis vinifera]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/373 (68%), Positives = 304/373 (81%), Gaps = 2/373 (0%)

Query: 3   NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYP 62
           ++Q ITCKA VCWG GE +KVEEIQVEPPKS+EVRVKMLYAS+CHTDIL   GFP PL+P
Sbjct: 40  SNQVITCKAAVCWGAGEAVKVEEIQVEPPKSSEVRVKMLYASICHTDILYCSGFPLPLFP 99

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
           RV GHEGVG+VES G+ V  +KEGD+VIPTY+GEC ECENC S  TNLCL++P+ LNGLM
Sbjct: 100 RVPGHEGVGMVESVGENVIALKEGDLVIPTYLGECGECENCRSGKTNLCLEHPLTLNGLM 159

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
           LD TSRMS+RGQ+LYH+FSCSTW+ YMV++ANY+VK+D  I  S+ASFLSCGF+TGYGAA
Sbjct: 160 LDGTSRMSIRGQRLYHLFSCSTWAGYMVVNANYLVKIDSRIALSEASFLSCGFSTGYGAA 219

Query: 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           WKEAKVEKGSSVAVLGLG VGLG ++GAR  GAA+IIGIDKN  K+E GK FGMTDFINP
Sbjct: 220 WKEAKVEKGSSVAVLGLGAVGLGVLEGARNQGAARIIGIDKNERKREMGKTFGMTDFINP 279

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
             + NK ISELV  +T   GVDY FEC G+ SL++E L+TTKVGKG +IVIG G  A V 
Sbjct: 280 -SKSNKPISELVHELTGXEGVDYSFECIGIQSLINEVLQTTKVGKGMLIVIGAGNKASVD 338

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT+ G  FGGIK +SD+P L++KC NKE +L  LLT+ ++LEEI KA +L
Sbjct: 339 INFLTLLL-GRTINGCIFGGIKVQSDIPLLVNKCINKEIQLDDLLTNEIQLEEIKKAYEL 397

Query: 363 LKQPDCVKVLITI 375
           LKQPDC+KVLI I
Sbjct: 398 LKQPDCIKVLIKI 410

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478647|ref|XP_003632151.1| PREDICTED: LOW QUALITY PROTEIN: alcohol dehydrogenase-like 1-like [Vitis vinifera]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/374 (67%), Positives = 306/374 (81%), Gaps = 3/374 (0%)

Query: 3   NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYP 62
           ++Q ITCKA VCWG GE +KVEEIQVEPPKS+EVRVKM+YAS+CHTDILC  GFP PL+P
Sbjct: 40  SNQVITCKAAVCWGAGEAVKVEEIQVEPPKSSEVRVKMMYASICHTDILCCSGFPLPLFP 99

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
           +V GHEGVG++ES G+ V  +KEGD+VIPTY+GEC ECENC S  TNLCL++P+ LNGLM
Sbjct: 100 KVPGHEGVGMMESVGENVIALKEGDLVIPTYLGECGECENCKSGKTNLCLEHPLTLNGLM 159

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
           LD TSRMS+RGQ+LYH+FSCSTW+EYMV++ANY+VK+D  I  S+ASFLSCGF+TGYGAA
Sbjct: 160 LDGTSRMSIRGQRLYHLFSCSTWAEYMVVNANYLVKIDSRIALSEASFLSCGFSTGYGAA 219

Query: 183 WKEAKVEKGSSVAVLGLGTVGLGAV-DGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           WK AKVEKGSSVAVLGLG VG G V +GAR  GAA+IIGIDKN  + E GK FGMTDFIN
Sbjct: 220 WKAAKVEKGSSVAVLGLGAVGXGYVLEGARNQGAARIIGIDKNERRCEMGKNFGMTDFIN 279

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 301
           P  + NK ISELV+ +T G GVDY FEC+G+ SL++E L+ TKVGKG +IVIG G +A +
Sbjct: 280 P-SKSNKPISELVRELTRGEGVDYSFECSGIQSLINEVLQPTKVGKGMLIVIGAGNNASM 338

Query: 302 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 361
            +N + L   GRT+KG  FGGIK +SD+P L++KC NKE +L  LLTH ++LEEI K  +
Sbjct: 339 DINFLTLLL-GRTIKGCIFGGIKVQSDIPLLVNKCINKEIQLDDLLTHEIQLEEIKKVYE 397

Query: 362 LLKQPDCVKVLITI 375
           LLKQPDC+KVLI I
Sbjct: 398 LLKQPDCIKVLIKI 411

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507902|gb|AFK42017.1| unknown [Lotus japonicus]

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 250/372 (67%), Positives = 305/372 (81%), Gaps = 3/372 (0%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           S+S+ ITCKA +CWG+G+P+ VEEIQV+PPK+TEVRVKML ASVCHTDI  ++GFP  +Y
Sbjct: 4   SSSEVITCKAAICWGVGKPVTVEEIQVDPPKATEVRVKMLCASVCHTDITSTQGFPG-VY 62

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
           P VLGHEGVGVVES GD+VK +KEGD+VIPTYIGEC+ECENC S  TNLCL YPI L GL
Sbjct: 63  PVVLGHEGVGVVESVGDQVKSLKEGDVVIPTYIGECQECENCVSGKTNLCLTYPIRLTGL 122

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D+TSRMS+RGQ+L+H+ SC+TWSEYMV D NYV+KVDPSIDP+ ASF+SCGF+TG+GA
Sbjct: 123 MPDNTSRMSIRGQRLHHVLSCATWSEYMVADVNYVLKVDPSIDPAHASFISCGFSTGFGA 182

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           AWK+AKVE GSSVAV+GLG VGLGA+ GA+M GA KIIGIDKN  K+EKG+AFGMT FIN
Sbjct: 183 AWKQAKVESGSSVAVIGLGAVGLGAISGAKMLGATKIIGIDKNEMKREKGEAFGMTHFIN 242

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 301
           P D   KS+SELVK ++ G  VDY FECTGVP LL+E+LE TKVG G+ I IGVG + +V
Sbjct: 243 PGDS-TKSVSELVKELSGGRSVDYSFECTGVPPLLTESLEATKVGTGETIAIGVGTEPIV 301

Query: 302 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 361
           P  + ++   GRTL+G+ FGG+KT SDL  + +KC+ +EF L +L TH V L +I KA +
Sbjct: 302 PFGIGSILY-GRTLRGSVFGGLKTISDLSIIANKCQKEEFPLQELFTHEVTLADIRKAFE 360

Query: 362 LLKQPDCVKVLI 373
           LLKQP+C KV+I
Sbjct: 361 LLKQPNCAKVVI 372

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|367460047|ref|NP_001238395.2| alcohol dehydrogenase-like [Glycine max]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 244/372 (65%), Positives = 303/372 (81%), Gaps = 2/372 (0%)

Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPR 63
           S+ ITCKA +CWG+G+P+ VEEIQV+PPK+TEVRVKML AS+C TDI  ++GFP   +P 
Sbjct: 5   SEIITCKAAICWGIGKPVTVEEIQVDPPKATEVRVKMLCASICSTDISSTKGFPHTNFPI 64

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
            LGHEGVG++ES GD+V  +KEGD+VIPTYIGEC+ECENC SE TNLC+ YP+   GLM 
Sbjct: 65  ALGHEGVGIIESVGDQVANLKEGDVVIPTYIGECQECENCVSEKTNLCMTYPVRWTGLMP 124

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D+TSRMS+RG+++YHIFSC+TWSEYMV DANYV+KVDP+ID + ASF+SCGF+TG+GAAW
Sbjct: 125 DNTSRMSIRGERIYHIFSCATWSEYMVSDANYVLKVDPTIDRAHASFISCGFSTGFGAAW 184

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           KEAKVE GS+VAV GLG VGLGAV G++M GA++IIGID N  K+ KG+AFG+TDFINP 
Sbjct: 185 KEAKVESGSTVAVFGLGAVGLGAVIGSKMQGASRIIGIDTNENKRAKGEAFGITDFINPG 244

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 303
           D  NKS SELVK ++ GMGVDY FECTGV +LLSE+LE TK+G GK IVIGVG++  +PL
Sbjct: 245 DS-NKSASELVKELSGGMGVDYSFECTGVSTLLSESLEATKIGTGKAIVIGVGIEITLPL 303

Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
            + A+   GRTLKG+ FGG++  SDL  L DK   KEF L +L TH V L +I+KA +LL
Sbjct: 304 GLFAILL-GRTLKGSVFGGLRAISDLSILADKGHKKEFPLQELFTHEVTLADINKAFELL 362

Query: 364 KQPDCVKVLITI 375
           KQP+CVKV+I +
Sbjct: 363 KQPNCVKVVINM 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543227|ref|XP_003540064.1| PREDICTED: alcohol dehydrogenase-like 2-like isoform 1 [Glycine max]

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/372 (65%), Positives = 302/372 (81%), Gaps = 2/372 (0%)

Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPR 63
           S+ ITCKA +CWG+G+P+ VEEIQV+PPK+TEVRVKML AS+C TDI  ++GFP   +P 
Sbjct: 5   SEIITCKAAICWGIGKPVTVEEIQVDPPKATEVRVKMLCASICSTDISSTKGFPHTNFPI 64

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
            LGHEGVG++ES GD+V  +KEGD+VIPTYIGEC+ECENC SE TNLC+ YP+   GLM 
Sbjct: 65  ALGHEGVGIIESVGDQVTNLKEGDVVIPTYIGECQECENCVSEKTNLCMTYPVRWTGLMP 124

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D+TSRMS+RG+++YHIFSC+TWSEYMV DANYV+KVDP+ID + ASF+SCGF+TG+GAAW
Sbjct: 125 DNTSRMSIRGERIYHIFSCATWSEYMVSDANYVLKVDPTIDRAHASFISCGFSTGFGAAW 184

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           KEAKVE GS+VAV GLG VGLGAV G++M GA++IIGID N  K+ KG+AFG+TDFINP 
Sbjct: 185 KEAKVESGSTVAVFGLGAVGLGAVIGSKMQGASRIIGIDTNENKRAKGEAFGITDFINPG 244

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 303
           D  NKS SELVK ++ GMG DY FECTGV +LLSE+LE TK+G GK IVIGVG++  +PL
Sbjct: 245 DS-NKSASELVKELSGGMGADYSFECTGVSTLLSESLEATKIGTGKAIVIGVGIEITLPL 303

Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
            + A+   GRTLKG+ FGG++  SDL  L DK   KEF L +L TH V L +I+KA +LL
Sbjct: 304 GLFAILL-GRTLKGSVFGGLRAISDLSILADKGHKKEFPLQELFTHEVTLADINKAFELL 362

Query: 364 KQPDCVKVLITI 375
           KQP+CVKV+I +
Sbjct: 363 KQPNCVKVVINM 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746116|emb|CBI16172.3| unnamed protein product [Vitis vinifera]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 248/369 (67%), Positives = 302/369 (81%), Gaps = 6/369 (1%)

Query: 11  AVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGV 70
           A VCWGLGE +KVEEIQVEPPKS+EVRVKMLYAS+CHTDI        P++P+V GHEGV
Sbjct: 161 AAVCWGLGEAMKVEEIQVEPPKSSEVRVKMLYASICHTDIFYCSELSLPMFPKVPGHEGV 220

Query: 71  GVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 130
           GVVES G+ V  +KEGD+VIPTY+GEC ECENC S  TN+CLK+P+   GLM D TSRMS
Sbjct: 221 GVVESVGENVTGLKEGDVVIPTYLGECGECENCRSPKTNVCLKHPVTFTGLMPDGTSRMS 280

Query: 131 VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 190
           +RGQ+L+HIFSCSTW+EYMV++ANY+VK+DP I PSDASFLSCGF+TGYGAAWK+AKVEK
Sbjct: 281 IRGQRLHHIFSCSTWTEYMVVNANYLVKIDPRIAPSDASFLSCGFSTGYGAAWKDAKVEK 340

Query: 191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 250
           GSSVAVLGLG VGLG + GAR  GAA+IIGIDKN  ++E G+AFGMTDFINP +E NKSI
Sbjct: 341 GSSVAVLGLGAVGLGVLQGARNQGAARIIGIDKNERRREVGEAFGMTDFINP-NESNKSI 399

Query: 251 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC 310
           SELV  +T G GVDY FECTG+PSL++EAL+ TKVGKG  +V+G+     V ++++AL  
Sbjct: 400 SELVNELTGGQGVDYSFECTGIPSLVNEALQATKVGKGMSMVLGIANVPTVDISLMALL- 458

Query: 311 GGRTLKGTTFGGIKTKSDLPTLLDKCKNK----EFKLHQLLTHHVKLEEIDKAIQLLKQP 366
            G+TLKG  FGGIK +SD+P ++DKC NK    + +L +LLTH V+LE+++KA +LLKQP
Sbjct: 459 SGKTLKGCFFGGIKVQSDIPVIVDKCINKASSLDIQLDELLTHEVQLEDMNKAFELLKQP 518

Query: 367 DCVKVLITI 375
           DCVKVLI I
Sbjct: 519 DCVKVLIKI 527

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543237|ref|XP_003540069.1| PREDICTED: LOW QUALITY PROTEIN: alcohol dehydrogenase-like 2-like [Glycine max]

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/373 (64%), Positives = 304/373 (81%), Gaps = 2/373 (0%)

Query: 3   NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYP 62
            S+ ITCKA +CWG+G+P+ VEEIQV+PPK+TEVRVKML AS+CHTDI  +EGFP   +P
Sbjct: 4   TSKVITCKATICWGIGKPITVEEIQVDPPKATEVRVKMLCASICHTDISSTEGFPHGKFP 63

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
             LGHEGVGV+ES GD+VK +KEGD+VIPT++G+C ECENC SE TNLCLKYP+   GLM
Sbjct: 64  LALGHEGVGVIESVGDQVKNLKEGDVVIPTFLGQCXECENCVSEKTNLCLKYPVMWTGLM 123

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
            D+TSRMS+RG+++YHI SC+TWSEYMV DANY++KVDP+ID + ASF+SCGF+TG+GAA
Sbjct: 124 PDNTSRMSIRGERIYHITSCATWSEYMVSDANYILKVDPTIDRAHASFISCGFSTGFGAA 183

Query: 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           WKEA VE GS+VAV GLG VGLGAV GA++ GA++IIGID N  K+EKG+AFG+TDFINP
Sbjct: 184 WKEANVESGSTVAVFGLGAVGLGAVIGAKLQGASRIIGIDTNENKREKGEAFGITDFINP 243

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
            D  N S SELVK +T GMGVDY FECTGV ++L+E+LE TK+G GK IVI VG + ++P
Sbjct: 244 GDSDN-SASELVKELTGGMGVDYSFECTGVSTVLTESLEATKIGTGKTIVISVGAEPILP 302

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           + + A+   GRTLKGT FGG+K  SDL  + +KC+ KEF L +L TH V L +I+KA +L
Sbjct: 303 VGLFAI-LHGRTLKGTLFGGLKAVSDLSIVAEKCQKKEFPLQELFTHEVTLADINKAFEL 361

Query: 363 LKQPDCVKVLITI 375
           +KQP+CVKV+I +
Sbjct: 362 VKQPNCVKVVINM 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.989	0.961	0.406	2.5e-72
TAIR|locus:2157627	390	AT5G42250 [Arabidopsis thalian	0.989	0.951	0.392	1.1e-71
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.989	0.941	0.407	1.8e-71
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.986	0.953	0.404	2.6e-70
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.973	0.938	0.407	5.5e-70
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.973	0.958	0.372	3.1e-67
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.981	0.970	0.364	1.5e-65
MGI|MGI:87929	374	Adh5 "alcohol dehydrogenase 5	0.984	0.986	0.388	2e-65
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.986	0.989	0.385	8.5e-65
RGD|2292706	374	Adh5 "alcohol dehydrogenase 5	0.984	0.986	0.385	1.1e-64

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
 Identities = 154/379 (40%), Positives = 223/379 (58%)

Query:     1 MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL 60
             ++  + I CKA +    GEPL +EEIQV+PP++ EVR+K+L  S+CHTD+   +    PL
Sbjct:     6 ITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPL 65

Query:    61 --YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--I 116
               +PR+LGHE VGVVES G++V   K+GD+V+P +  +C+EC+ C S  +N C KY    
Sbjct:    66 ARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDY 125

Query:   117 ALNGLMLDSTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 175
               N      TSR    RG+ ++H    S+++EY V+D  ++VK+ P I    A+ LSC  
Sbjct:   126 LSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSV 185

Query:   176 TTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFG 235
              TG GAAWK A VE+                    R+ GAAKIIG+D NP K E GK FG
Sbjct:   186 ATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFG 245

Query:   236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXX 295
             +TDF+NP     K+ISE+++ +T  +G DY FEC G+ SL+ EA ++T            
Sbjct:   246 ITDFVNPALCGEKTISEVIREMTD-VGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGM 304

Query:   296 XXDAMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
                A+ P+++ +     GRT+ GT FGG+K K D+P L+D+   KE  L  L+TH +  E
Sbjct:   305 EQKAL-PISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFE 363

Query:   355 EIDKAIQLLKQPDCVKVLI 373
             EI+KA  LL + + ++ +I
Sbjct:   364 EINKAFHLLAEGNSIRCII 382

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)]

 Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
 Identities = 148/377 (39%), Positives = 223/377 (59%)

Query:     2 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSE-GFPAPL 60
             S+ + I CKA V    GEPL +EEI V PP+  EVR++++  ++CH+D+   +   P   
Sbjct:    12 SSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKLQVPPAC 71

Query:    61 YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
             +PR+LGHE +GVVES G+ VKEV EGD V+PT++ +C +C +C S  +NLC K+P  ++ 
Sbjct:    72 FPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSP 131

Query:   121 LM--LDSTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT 177
              M   D++SR + + G+ L+H  + S++SEY V+D   VVK+D SI PS A  LSCG +T
Sbjct:   132 WMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVST 191

Query:   178 GYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMT 237
             G GAAW+ AKVEK                    R+ GA++IIG+D NP K + G+ FG+T
Sbjct:   192 GVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVT 251

Query:   238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXX 297
             +F+N        +SE++  +T G G DYCFEC G  SL+ EA                  
Sbjct:   252 EFVNSMTCEKNRVSEVINEMTDG-GADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDK 310

Query:   298 D-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
               + + L+   +   G+ L G+ FGG+K K+ +P LL +  + E +L + +TH +K EEI
Sbjct:   311 PGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEI 370

Query:   357 DKAIQLLKQPDCVKVLI 373
             + A QLL +  C++ ++
Sbjct:   371 NDAFQLLLEGKCIRCVL 387

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 158/388 (40%), Positives = 220/388 (56%)

Query:     2 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAP-- 59
             +  + ITCKA V WG   PL ++EI V+PP+  EVRVK+LY+S+CHTD+ C  G      
Sbjct:     4 TQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAER 63

Query:    60 LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-AL 118
              +PR+LGHE VG+VES G+ VK+VKEGD VIPT+ GEC EC+ C  E +NLC +Y +  +
Sbjct:    64 AFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPM 123

Query:   119 NGLML-DSTSRMSV---------RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA 168
               +M+ D  +R S          + Q +YH  + ST++EY V+D+  VVK+DP+      
Sbjct:   124 KRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQM 183

Query:   169 SFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKK 228
             S LSCG +TG GAAW  A V++                    R  GA++IIG+D N  K 
Sbjct:   184 SLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKF 243

Query:   229 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA-LETTXXXX 287
             EKGK  G+TDFINP D   K + ++++ IT G GVDY FECTG   +L EA L T     
Sbjct:   244 EKGKLMGVTDFINPKDL-TKPVHQMIREITGG-GVDYSFECTGNVDVLREAFLSTHVGWG 301

Query:   288 XXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLL 347
                          +PL+ + L   GR + G+ FGG K KS LP    +C     KL   +
Sbjct:   302 STVLVGIYPTPRTLPLHPMELF-DGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLEPFI 360

Query:   348 THHVKLEEIDKAIQLLKQPDCVKVLITI 375
             T+ +  E+I+ A QLL+    ++ ++ I
Sbjct:   361 TNELPFEKINDAFQLLRDGKSLRCILQI 388

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
 Identities = 153/378 (40%), Positives = 216/378 (57%)

Query:     2 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSE-GF-PAP 59
             +  + ITCKA +C   GE L +E+I V+PP++ EVR+K+L  S+CHTD+   +  F P  
Sbjct:     9 NEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPIS 68

Query:    60 LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IA 117
              +PR+LGHE VGVVES G+ V   K+GD+V+P +   C+EC++C S  TN C +Y     
Sbjct:    69 RFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFI 128

Query:   118 LNGLMLDSTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFT 176
              N       SR     G+ ++H    S++SEY V+D  ++VK+ P I    A+ LSCG +
Sbjct:   129 SNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVS 188

Query:   177 TGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGM 236
             TG GAAWK A VE+                    R+ GAAKIIGID N  K E GK FG 
Sbjct:   189 TGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGF 248

Query:   237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXX 296
             TDFINP     K ISE++K +T G GVDY FEC G+ SLL+EA  +T             
Sbjct:   249 TDFINPTLCGEKKISEVIKEMTEG-GVDYSFECVGLASLLNEAFISTRTGTGKTVMLGME 307

Query:   297 XDAMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 355
               A  P+++ +     GR + G+ FGG+K+K D+P L+D    KE  L   +TH +  +E
Sbjct:   308 KHA-APISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKE 366

Query:   356 IDKAIQLLKQPDCVKVLI 373
             I+KA  LL++   ++ ++
Sbjct:   367 INKAFALLEEGKSLRCIL 384

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
 Identities = 152/373 (40%), Positives = 211/373 (56%)

Query:     7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--YPRV 64
             I CKA V    GE L +EEI V+PP++ EVR+K++  S+CHTD+  S+    PL  +PR+
Sbjct:    15 IRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARFPRI 74

Query:    65 LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALNGLM 122
             LGHE VGV+ES G+ V   ++GD+V+P +   C+EC +C S  +N C ++      N   
Sbjct:    75 LGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRR 134

Query:   123 LDSTSRMSVR-GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
                TSR     G+ +YH    S++SEY V+D  ++VK+ P I    A+ LSCG +TG GA
Sbjct:   135 YGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGA 194

Query:   182 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
             AWK A VEK                    R+ GA KIIG+D NP K E GK FG TDFIN
Sbjct:   195 AWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTDFIN 254

Query:   242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMV 301
                     ISE++K +T G GVDY FEC G+PSLL+EA  +T                + 
Sbjct:   255 STLCGENKISEVIKEMTGG-GVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKH-LT 312

Query:   302 PLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
             P+++ +     GR + G+ FGG+K K D+P L+D    KE  L   +TH +K EEI+KA 
Sbjct:   313 PVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAF 372

Query:   361 QLLKQPDCVKVLI 373
              LL Q   ++ ++
Sbjct:   373 DLLVQGKSLRCIL 385

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 138/370 (37%), Positives = 208/370 (56%)

Query:     5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
             Q ITC A V W  GEPL +EE++V PP+  E+R+K++  S+C +D+   E     L PR+
Sbjct:    12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWES--QSLLPRI 69

Query:    65 LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-L 123
              GHE  G+VES G+ V E ++GD V+  + GEC  C +C S  +N+C    +   GLM  
Sbjct:    70 FGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLMHS 129

Query:   124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
             D  +R S++G+ +YH  + S++SEY V+ +   VKVDP         LSCG   G GAAW
Sbjct:   130 DQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAW 189

Query:   184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
               A V+K                    ++ GAA+I+G+D NP K E+ K FG+TDFIN +
Sbjct:   190 NVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSN 249

Query:   244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPL 303
             D  ++ I +++K +T G G D+ FEC G   + + AL++                     
Sbjct:   250 DL-SEPIPQVIKRMTGG-GADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVS 307

Query:   304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
                 L   G++LKGT FGG K KSDLP+L+DK  NKE  + + +TH++  +EI+KA  L+
Sbjct:   308 AHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLM 367

Query:   364 KQPDCVKVLI 373
             ++  C++ ++
Sbjct:   368 REGKCLRCVL 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 139/381 (36%), Positives = 211/381 (55%)

Query:     2 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
             +  Q I CKA V W  G+PL +EE++V PP+  EVR+K+L+ S+CHTD+   E     PL
Sbjct:     3 TTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPL 62

Query:    61 YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC--LKYPIAL 118
             +PR+ GHE  G+VES G+ V +++ GD V+P + GEC EC +C SE +N+C  L+     
Sbjct:    63 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTER 122

Query:   119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
              G++ D  SR S+ G+ +YH    ST+SEY V+ +  V K++P         +SCG +TG
Sbjct:   123 GGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTG 182

Query:   179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
              GA    AK +K                    R+ GA++IIG+D N  + ++ K FG+T+
Sbjct:   183 LGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTE 242

Query:   239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXX--XX 296
              +NP D  +K I +++  +T G GVD   ECTG    + +A E                 
Sbjct:   243 CVNPKDH-DKPIQQVIAEMTDG-GVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSK 300

Query:   297 XDAMV--PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
              DA    P+N +      RTLKGT FG  K K+D+P +++K  NKE +L + +TH V   
Sbjct:   301 DDAFKTHPMNFL----NERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFS 356

Query:   355 EIDKAIQLLKQPDCVKVLITI 375
             EI+KA   + + + ++ +IT+
Sbjct:   357 EINKAFDYMLKGESIRCIITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

MGI|MGI:87929 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Mus musculus (taxid:10090)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 146/376 (38%), Positives = 207/376 (55%)

Query:     1 MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAP 59
             M+N Q I CKA V W  G+PL +EEI+V PPK+ EVR+K+L  +VCHTD     G  P  
Sbjct:     1 MAN-QVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEG 59

Query:    60 LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
              +P +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +   
Sbjct:    60 CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119

Query:   120 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
              GLM D TSR + +G+ ++H    ST+SEY V+    V K+DPS        L CG +TG
Sbjct:   120 KGLMPDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTG 179

Query:   179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
             YGAA   AKVE                     ++ GA++IIGID N  K  K K FG ++
Sbjct:   180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASE 239

Query:   239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD 298
              I+P D  +KSI E++  +T G GVDY FEC G   ++  ALE                 
Sbjct:   240 CISPQDF-SKSIQEVLVEMTDG-GVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAAS 297

Query:   299 AM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
                +      L  G RT KGT FGG K+   +P L+ +  +K+ K+ + +T ++  ++I+
Sbjct:   298 GEEISTRPFQLVTG-RTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQIN 356

Query:   358 KAIQLLKQPDCVKVLI 373
             +A  L+   D ++ ++
Sbjct:   357 QAFDLMHSGDSIRTVL 372

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IMP

GO:0003016 "respiratory system process" evidence=IMP

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISO;IDA

GO:0005504 "fatty acid binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0006068 "ethanol catabolic process" evidence=ISO

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IMP

GO:0018467 "formaldehyde dehydrogenase activity" evidence=ISO

GO:0032496 "response to lipopolysaccharide" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0045777 "positive regulation of blood pressure" evidence=IMP

GO:0046294 "formaldehyde catabolic process" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IMP

GO:0051775 "response to redox state" evidence=ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IMP

GO:0055114 "oxidation-reduction process" evidence=ISO;IMP;IDA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
 Identities = 146/379 (38%), Positives = 209/379 (55%)

Query:     1 MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAP 59
             M+N + I CKA V W  G+PL +EEI+V PPK+ EVR+K++  +VCHTD     G  P  
Sbjct:     1 MAN-EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG 59

Query:    60 LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
              +P +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +   
Sbjct:    60 CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119

Query:   120 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTT 177
              GLM D TSR + +G+ + H    ST+SEY V+    V K+DP + P D    L CG +T
Sbjct:   120 KGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP-LAPLDKVCLLGCGIST 178

Query:   178 GYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMT 237
             GYGAA   AK+E                     ++ GA++IIG+D N  K  + K FG T
Sbjct:   179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238

Query:   238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXX 297
             + INP D  +K I E++  +T G GVDY FEC G   ++  ALE                
Sbjct:   239 ECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA 296

Query:   298 DAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
                 +      L  G RT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI
Sbjct:   297 SGEEIATRPFQLVTG-RTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEI 355

Query:   357 DKAIQLLKQPDCVKVLITI 375
             +KA +L+     ++ ++ I
Sbjct:   356 NKAFELMHSGKSIRTVVKI 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
 Identities = 145/376 (38%), Positives = 206/376 (54%)

Query:     1 MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAP 59
             M+N Q I CKA V W  G+PL +EEI+V PP++ EVR+K++  +VCHTD     G  P  
Sbjct:     1 MAN-QVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEG 59

Query:    60 LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
              +P +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +   
Sbjct:    60 CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119

Query:   120 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
              GLM D TSR + +G+ + H    ST+SEY V+    V K+DPS        L CG +TG
Sbjct:   120 KGLMPDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTG 179

Query:   179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
             YGAA   AKVE                     ++ GA++IIGID N  K  K K FG T+
Sbjct:   180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATE 239

Query:   239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD 298
              INP D  +KSI E++  +T G GVD+ FEC G   ++  ALE                 
Sbjct:   240 CINPQDF-SKSIQEVLIEMTDG-GVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAAS 297

Query:   299 AM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
                +      L  G RT KGT FGG K+   +P L+ +  +K+ K+ + +T ++  ++I+
Sbjct:   298 GEEISTRPFQLVTG-RTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQIN 356

Query:   358 KAIQLLKQPDCVKVLI 373
             KA  L+   + ++ ++
Sbjct:   357 KAFDLMHSGNSIRTVL 372

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;ISO;IDA

GO:0005504 "fatty acid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA;ISO

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0032496 "response to lipopolysaccharide" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0045777 "positive regulation of blood pressure" evidence=IEA;ISO

GO:0046294 "formaldehyde catabolic process" evidence=IEA;ISO

GO:0051409 "response to nitrosative stress" evidence=IEA;ISO

GO:0051775 "response to redox state" evidence=IEA;ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9QYY9	ADH4_MOUSE	1, ., 1, ., 1, ., 1	0.4052	0.984	0.9787	yes	no
Q64563	ADH4_RAT	1, ., 1, ., 1, ., 1	0.4116	0.9866	0.9814	yes	no
P78870	FADH1_SCHPO	1, ., 1, ., 1, ., -	0.4289	0.9813	0.9735	yes	no
Q17335	ADHX_CAEEL	1, ., 1, ., 1, ., 2, 8, 4	0.4236	0.976	0.9531	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4255	0.9866	0.9762	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4225	0.9813	0.9839	yes	no
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.4228	0.9653	0.9378	yes	no
Q9FH04	ADHL7_ARATH	1, ., 1, ., 1, ., 1	0.4350	0.9893	0.9512	yes	no
P08319	ADH4_HUMAN	1, ., 1, ., 1, ., 1	0.4109	0.976	0.9631	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921
4th Layer	1.1.1.1	0.914

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XVIII1194 hypothetical protein (377 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	375
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	0.0
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	1e-154
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-133
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-123
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-121
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-116
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-113
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-111
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-109
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-102
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-88
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-80
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-73
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	4e-68
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-61
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-57
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-57
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	7e-55
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	9e-55
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-50
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-48
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	4e-48
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	1e-45
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-45
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-45
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	8e-45
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	9e-45
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-44
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	3e-44
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	6e-43
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	3e-42
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	1e-41
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-40
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-39
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	8e-39
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	1e-38
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	4e-38
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-37
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-37
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-35
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-33
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	3e-32
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	7e-32
cd05281	341	cd05281, TDH, Threonine dehydrogenase	8e-32
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	1e-31
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	4e-30
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-29
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-28
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	8e-28
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-27
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-27
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	3e-27
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	4e-27
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-26
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	7e-26
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-25
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	6e-25
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	1e-24
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-23
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-23
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	9e-23
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	4e-22
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	1e-21
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	7e-21
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	8e-21
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-20
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	6e-20
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	4e-19
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	4e-19
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-18
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	3e-18
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	4e-18
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	5e-18
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	9e-18
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-16
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-15
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	4e-15
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	5e-15
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	8e-15
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-13
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	2e-13
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-12
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	4e-12
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-11
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	6e-11
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	9e-11
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	3e-09
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	3e-09
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	5e-09
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	9e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-08
smart00829	287	smart00829, PKS_ER, Enoylreductase	7e-07
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	7e-07
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	8e-07
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-06
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	1e-05
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	6e-05
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-04
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-04
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	3e-04
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	0.001

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  521 bits (1344), Expect = 0.0
 Identities = 197/368 (53%), Positives = 255/368 (69%), Gaps = 3/368 (0%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           I CKA V W  G+PL +EEI+V PPK+ EVR+KML  SVCHTDIL  EGF A L+P +LG
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILG 60

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           HEG G+VES G+ V  +K GD VIP +IG+C EC NC S  TNLC KY    +GLM D T
Sbjct: 61  HEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGT 120

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 186
           SR + +G+K+YH    ST+S+Y V+D NYV K+DP+        L CGF+TGYGAAW  A
Sbjct: 121 SRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTA 180

Query: 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246
           KVE GS+VAV GLG VGL A+ GA++ GA++IIG+D N  K EK K FG TDFINP D  
Sbjct: 181 KVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSD 240

Query: 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI 306
            K +SE+++ +T G GVDY FECTG   L++EALE+TK+G G  +V+GV   A + +   
Sbjct: 241 -KPVSEVIREMT-GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPF 298

Query: 307 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 366
            L   GRT KG+ FGG K++SD+P L+ K  NK+F L +L+TH +  EEI+K   L+K  
Sbjct: 299 QLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSG 357

Query: 367 DCVKVLIT 374
           +C++ +IT
Sbjct: 358 ECIRTVIT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  437 bits (1126), Expect = e-154
 Identities = 171/372 (45%), Positives = 241/372 (64%), Gaps = 7/372 (1%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVL 65
           ITCKA V W  G+PL +EE++V PP++ EVR+K+L+ S+CHTD+   E     PL+PR+L
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLML- 123
           GHE  G+VES G+ V ++K GD V+P + GECKEC +C SE +N+C    I    G+M+ 
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D  SR S+ G+ +YH    ST+SEY V+    V K++P         LSCG +TG GAAW
Sbjct: 121 DGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW 180

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
             AKV+KGS+VA+ GLG VGL   +GAR+ GA++IIG+D NP K E+ K FG+T+F+NP 
Sbjct: 181 NVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVP 302
           D  +K + E++  +T G GVDY FECTG    +  A E    G G  +++GV   DA+  
Sbjct: 241 DH-DKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFS 298

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
            + + L   GRTLKGT FGG K K+DLP L++K   KE +L + +TH +   EI+KA  L
Sbjct: 299 THPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDL 357

Query: 363 LKQPDCVKVLIT 374
           L + +C++ ++ 
Sbjct: 358 LLKGECLRCILH 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  384 bits (989), Expect = e-133
 Identities = 167/374 (44%), Positives = 222/374 (59%), Gaps = 12/374 (3%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVL 65
           ITCKA V W  G+PL +EE++V PPK+ EVR+K+L   VCHTD     G  P  L+P +L
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD 124
           GHEG G+VES G+ V  VK GD VIP Y  EC EC+ C S  TNLC K       GLM D
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPD 120

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
            TSR S +G+ +YH    ST+SEY V+    V K++P         L CG TTGYGA   
Sbjct: 121 GTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLN 180

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
            AKVE GS+VAV GLG VGL  + GA+  GA++IIGID NP K E  K FG TD +NP D
Sbjct: 181 TAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV---GVD-AM 300
              K I +++  +T G GVDY FEC G   ++  ALE    G G  ++IGV   G + + 
Sbjct: 241 HD-KPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEIST 298

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
            P  ++     GR  KGT FGG K++S +P L++     + K+ + +TH + L+EI++A 
Sbjct: 299 RPFQLVT----GRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAF 354

Query: 361 QLLKQPDCVKVLIT 374
            L+     ++ ++ 
Sbjct: 355 DLMHAGKSIRTVVK 368

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  359 bits (923), Expect = e-123
 Identities = 172/376 (45%), Positives = 237/376 (63%), Gaps = 10/376 (2%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC--SEGFPAPLYPRV 64
           ITCKA V WG GEPL +EEI+V+PP+  EVR+K+LY S+CHTD+     E      YPR+
Sbjct: 9   ITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRI 68

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLML 123
           LGHE  G+VES G+ V+++K GD VIP + GEC +C  C  + TNLC  Y +     +M+
Sbjct: 69  LGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMV 128

Query: 124 -DSTSRMSVR--GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 180
            D  +R S +  GQ +YH  + ST++EY V+D+  VVK+DP+      S LSCG +TG G
Sbjct: 129 NDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVG 188

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
           AAW  A V+ GSSVA+ GLG VGL   +GAR  GA+KIIG+D NP K EKGK  G+TDFI
Sbjct: 189 AAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI 248

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDA 299
           NP D  +K + E ++ +T G GVDY FEC G   +L EA  +T  G G  +++G+     
Sbjct: 249 NPKDS-DKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPK 306

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
           M+PL+ + L   GR++ G+ FG  K KS LP L  +C      L   +TH +  E+I++A
Sbjct: 307 MLPLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEA 365

Query: 360 IQLLKQPDCVKVLITI 375
            QLL+    ++ L+ +
Sbjct: 366 FQLLEDGKALRCLLHL 381

Length = 381

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  353 bits (908), Expect = e-121
 Identities = 148/371 (39%), Positives = 209/371 (56%), Gaps = 7/371 (1%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           +  +A V    G+PL++EE+ ++PP++ EV V++    VCHTD     G     +P VLG
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGFPAVLG 60

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK-YPIALNGLMLDS 125
           HEG G+VE+ G+ V  VK GD VI  +  EC +C+ C S   NLC         G M D 
Sbjct: 61  HEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDG 120

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
           T+R+S  G  +YH   CST++EY V+    +VK+DP      A  L CG TTG GA    
Sbjct: 121 TTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNT 180

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           AKVE G +VAV GLG VGL A+ GA+  GA +II +D NP K E  K FG T F+NP + 
Sbjct: 181 AKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEV 240

Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLN 304
            +  + E +  +T G G DY FEC G   ++ +ALE T  G G  ++IGV G    +   
Sbjct: 241 DD--VVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTR 296

Query: 305 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 364
              L   GR  KG+ FGG + +SD+P L+D     +  L +L+TH + LE+I++A  L+ 
Sbjct: 297 PFQLV-TGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMH 355

Query: 365 QPDCVKVLITI 375
           +   ++ +I  
Sbjct: 356 EGKSIRSVIRF 366

Length = 366

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  342 bits (880), Expect = e-116
 Identities = 147/370 (39%), Positives = 212/370 (57%), Gaps = 5/370 (1%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           I CKA V W   +P  +EEI+V PPK+ EVR+K++   +C +D     G     +P +LG
Sbjct: 6   IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVILG 65

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDS 125
           HE  G+VES G+ V  VK GD VIP ++ +C +C  C +  +NLCLK  +    GLM D 
Sbjct: 66  HEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDG 125

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
           TSR + +G+ ++H    ST+SEY V+D   V K+D +        + CGF+TGYGAA   
Sbjct: 126 TSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNT 185

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           AKV  GS+ AV GLG VGL A+ G +  GA++II +D N  K  K K  G T+ INP D 
Sbjct: 186 AKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDY 245

Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-MVPLN 304
             K I E++  +T G GVD+ FE  G    +  AL +   G G  +++GV   +  + +N
Sbjct: 246 -KKPIQEVLTEMTDG-GVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSIN 303

Query: 305 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 364
            + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   LL+
Sbjct: 304 PMLLLT-GRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLR 362

Query: 365 QPDCVKVLIT 374
               ++ ++T
Sbjct: 363 SGKSIRTVLT 372

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  334 bits (858), Expect = e-113
 Identities = 159/374 (42%), Positives = 232/374 (62%), Gaps = 5/374 (1%)

Query: 1   MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL 60
           +S    ITC+A V WG GE L +EE++V PP+  E+R+K++  S+C +D+   E     L
Sbjct: 5   ISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWES--QAL 62

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
           +PR+ GHE  G+VES G+ V E ++GD V+  + GEC  C +C S  +N+C    +   G
Sbjct: 63  FPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKG 122

Query: 121 LM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
           +M  D  +R S++G+ +YH  + S++SEY V+ +   VKVDP         LSCG   G 
Sbjct: 123 VMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGL 182

Query: 180 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
           GAAW  A V KGSSV + GLGTVGL    GA++ GA++IIG+D NP K EK K FG+TDF
Sbjct: 183 GAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDF 242

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 299
           INP+D  ++ I +++K +T G G DY FEC G   + + AL++   G G  + +GV    
Sbjct: 243 INPND-LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK 300

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
                   L   GRTLKG+ FGG K KSDLP+L+DK  NKE  + + +TH++  +EI+KA
Sbjct: 301 PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKA 360

Query: 360 IQLLKQPDCVKVLI 373
            +L+++  C++ +I
Sbjct: 361 FELMREGKCLRCVI 374

Length = 378

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  328 bits (844), Expect = e-111
 Identities = 134/367 (36%), Positives = 200/367 (54%), Gaps = 7/367 (1%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHE 68
           +A V   +G+PL++EE++++ P   EV V++  A +CH+D+    G  PAPL P VLGHE
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPL-PAVLGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
           G GVVE  G  V  VK GD V+ ++I  C  C  C+    NLC      L G + D T R
Sbjct: 61  GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRR 120

Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 188
            +  G+ +  +    T++EY V+    VVK+D  I    A+ L CG TTG GA    A+V
Sbjct: 121 FTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARV 180

Query: 189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 248
             G +VAV+G G VGL A+ GAR+ GA++II +D  P K E  + FG T  +N  ++   
Sbjct: 181 RPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED--- 237

Query: 249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDAMVPLNVIA 307
              E V+ +T G G DY FE  G  + + +AL  T+ G G  +V+G+G     V L  + 
Sbjct: 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALE 296

Query: 308 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 367
           L    + L+G+ +G    + D+P LLD  +    KL +L+T    L+EI++A   +   +
Sbjct: 297 LFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGE 356

Query: 368 CVKVLIT 374
             + +I 
Sbjct: 357 NARGVIV 363

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  323 bits (830), Expect = e-109
 Identities = 156/369 (42%), Positives = 220/369 (59%), Gaps = 7/369 (1%)

Query: 9   CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGH 67
           CKA V W  G+PL +EEI+V PPK+ EVR+K++   VCHTD+   +G  P PL P +LGH
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPL-PVILGH 59

Query: 68  EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDST 126
           EG G+VES G  V  +K GD VIP +  +C +C+ C +   NLC K       GLM D T
Sbjct: 60  EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGT 119

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 186
           SR + +G+ ++H    ST++EY V+    + K+DP         + CGF+TGYGAA   A
Sbjct: 120 SRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTA 179

Query: 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246
           KV  GS+ AV GLG VGL  + G +  GA++II +D N  K EK K  G T+ INP D  
Sbjct: 180 KVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD-Q 238

Query: 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-MVPLNV 305
           +K I E++  +T G GVDY FE  G    L +AL+ T++G G  +V+GV        L+ 
Sbjct: 239 DKPIVEVLTEMTDG-GVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDP 297

Query: 306 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
             L   GRT+KGT FGG K+K  +P L+   + K+F L +L+TH +  EEI+    L++ 
Sbjct: 298 NDLL-TGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRS 356

Query: 366 PDCVKVLIT 374
            + ++ ++T
Sbjct: 357 GESIRTILT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  307 bits (787), Expect = e-102
 Identities = 157/368 (42%), Positives = 218/368 (59%), Gaps = 6/368 (1%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHE 68
           +A V W  G+PLK+EE+ VE P+  EV V+++   VCHTD     G  P  ++P +LGHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDSTS 127
           G G+VE+ G+ V  VK GD VIP Y  EC EC+ C S  TNLC+        GLM D TS
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTS 122

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 187
           R S  GQ +YH   CST+SEY V+    + K++P+    +   L CG TTG GA    AK
Sbjct: 123 RFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAK 182

Query: 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247
           VE+G +VAV GLG +GL  + GARM  A++II ID NP K E  K  G TD +NP+D  +
Sbjct: 183 VEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY-D 241

Query: 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVI 306
           K I E++  IT G GVDY FEC G  +++  ALE    G G+ I+IGV G    +     
Sbjct: 242 KPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPF 300

Query: 307 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 366
            L   GR  +G+ FGG+K +++LP ++++    E  L   +TH + LE+I++A  L+ + 
Sbjct: 301 QLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEG 359

Query: 367 DCVKVLIT 374
             ++ +I 
Sbjct: 360 KSIRTVIH 367

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  271 bits (695), Expect = 1e-88
 Identities = 120/372 (32%), Positives = 190/372 (51%), Gaps = 12/372 (3%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           +   A V    G P  +E+++++ P+  EV V+++   +CHTD++  +G      P VLG
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPLPAVLG 60

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDS 125
           HEG GVVE+ G  V  +K GD V+ ++   C EC NC S     C  + P+  +G   D 
Sbjct: 61  HEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPDG 119

Query: 126 TSRMSVRGQK--LYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           ++ +S+        H F  S+++ Y V+    VVKVD  +     + L CG  TG GA  
Sbjct: 120 STPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVL 179

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
              K   GSS+AV G G VGL AV  A++ G   II +D    + E  K  G T  INP 
Sbjct: 180 NVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPK 239

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDAMVP 302
           +E    +   ++ IT G GVDY  + TGVP+++ +A++      G + ++G     A V 
Sbjct: 240 EE---DLVAAIREITGG-GVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVT 294

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           L+V  L   G+T++G   G    +  +P L++  +  +F   +L+T +   E+I++AI  
Sbjct: 295 LDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFY-PFEDINQAIAD 353

Query: 363 LKQPDCVK-VLI 373
            +    +K VL 
Sbjct: 354 SESGKVIKPVLR 365

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  251 bits (642), Expect = 1e-80
 Identities = 132/358 (36%), Positives = 196/358 (54%), Gaps = 11/358 (3%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHE 68
           KA V WG G+P +VEEI+++ PK+ EV VK++ + +CH+D  L +   P P YP + GHE
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTS 127
           G GVV   G  V  VK GD V+ ++I  C  C  C++ + NLC      L G  + D T 
Sbjct: 63  GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTY 122

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 187
           R    GQ +  +    T+SEY V+    VVK+D  I    A  + CG  TG+G+A   A 
Sbjct: 123 RFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIAD 182

Query: 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247
           V  G +V V+G+G VG+ AV GA + GA K+I +D   +K+E+   FG T      +E  
Sbjct: 183 VRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFASMEEAV 242

Query: 248 KSISELVKGITHGMGVDYCFECTGV--PSLLSEALETTKVGKGKVIVIGVG--VDAMVPL 303
           + + EL    T+G G D      G      ++EAL  T+ G G+V+V G+G   D  V +
Sbjct: 243 QLVREL----TNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVKV 297

Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 361
           N+  L    + L+GT FGG   ++D+P LL+  +  + KL +L+T    L++I++  Q
Sbjct: 298 NLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQ 355

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  232 bits (593), Expect = 2e-73
 Identities = 122/359 (33%), Positives = 182/359 (50%), Gaps = 13/359 (3%)

Query: 20  PLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGD 78
           PL +EE++++PP   EV VK+  A +CH+D+    G  P PL P  LGHE  GVV   G+
Sbjct: 20  PLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-PMALGHEAAGVVVEVGE 78

Query: 79  EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA---LNGLMLDSTSRMSVRGQK 135
            V +++ GD V+  ++  C  C  C      LC   P A     G +L    R+ +RG +
Sbjct: 79  GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALC--EPGAAANGAGTLLSGGRRLRLRGGE 136

Query: 136 LYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVA 195
           + H    S ++EY V+    VVK+D  +    A+   C   TG GA    A V  G SVA
Sbjct: 137 INHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVA 196

Query: 196 VLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK 255
           V+GLG VGL A+ GA   GA++++ +D N  K    +  G T  +N  D    +  E V+
Sbjct: 197 VVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDP---NAVEQVR 253

Query: 256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIALACGGRT 314
            +T G GVDY FE  G    L  A E T+ G G  +  G+   +A + +  ++L    RT
Sbjct: 254 ELTGG-GVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERT 311

Query: 315 LKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 373
           LKG+  G    + D+P  L    +    + +LLTH + L+EI++    L   + V+ +I
Sbjct: 312 LKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  218 bits (558), Expect = 4e-68
 Identities = 116/366 (31%), Positives = 176/366 (48%), Gaps = 20/366 (5%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG---FPAPLYPRVLG 66
           KA V  G   PL +EEI V  PK  E+ +++    VCH+D+   +G   FP P    VLG
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPF---VLG 58

Query: 67  HEGVGVVESAGDEVK---EVKEGDIVIPTYIGECKECENCTSEMTNLC---LKYPIALNG 120
           HE  G V   G  V+    +  GD V+ ++I  C +C  C     NLC     Y      
Sbjct: 59  HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGT 118

Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 180
           L  D T+R+        +++S    +EY V+ A  +  +  S+D ++++ L C   T YG
Sbjct: 119 L-YDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYG 177

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
           A    A V  G +VAV+G+G VG  A+  A+  GA+ II +D    K  K K  G T  +
Sbjct: 178 ALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDA 299
           N   E        ++ IT G GVD   E  G P     AL+  + G G+ +V+G+    A
Sbjct: 238 NAAKE---DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGA 293

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
              + +  L   G  + G ++G  + + DLP L+    + +     L+TH  KLEEI++A
Sbjct: 294 TAEIPITRLVRRGIKIIG-SYGA-RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEA 351

Query: 360 IQLLKQ 365
            + L++
Sbjct: 352 YENLRK 357

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  200 bits (512), Expect = 1e-61
 Identities = 112/362 (30%), Positives = 169/362 (46%), Gaps = 40/362 (11%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVL 65
           +T KA V    G+PL++EE+ V  P   EV +K+    VCHTD+  ++G +P P  P + 
Sbjct: 2   MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIP 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHE VG V   G+ V  +K GD V   ++   C ECE C S   NLC    I   G   D
Sbjct: 62  GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT--GYTTD 119

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                               ++EY+V+ A YVVK+   +D ++A+ L C   T Y A  K
Sbjct: 120 ------------------GGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-K 160

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
           +A V+ G  VAV+G G +G  AV  A+  G A++I I ++  K E  K  G    IN  D
Sbjct: 161 KANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEEKLELAKKLGADHVINSSD 219

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG-VGVDAMVPL 303
                  E VK I      D   +  G P+ L  +L+  + G G ++++G  G   +  L
Sbjct: 220 S---DALEAVKEI-----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLL 269

Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
               L     ++ G+  G      DL   LD     + K    +   + L+EI++A + +
Sbjct: 270 PAFLLILKEISIVGSLVGTRA---DLEEALDFAAEGKIKPE--ILETIPLDEINEAYERM 324

Query: 364 KQ 365
           ++
Sbjct: 325 EK 326

Length = 339

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  188 bits (480), Expect = 1e-57
 Identities = 86/302 (28%), Positives = 129/302 (42%), Gaps = 35/302 (11%)

Query: 35  EVRVKMLYASVCHTDILCSEG--FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPT 92
           EV V++  A +C TD+    G   P P  P +LGHEG GVV   G  V  VK GD V+  
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 93  YIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID 152
               C  CE C        +     L+G                        ++EY+V+ 
Sbjct: 61  PNLGCGTCELCRELCPGGGI-LGEGLDG-----------------------GFAEYVVVP 96

Query: 153 ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARM 212
           A+ +V +   +   +A+ L     T Y A  +   ++ G +V VLG G VGL A   A+ 
Sbjct: 97  ADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKA 156

Query: 213 HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 272
            G A++I  D++  K E  K  G    I+  +E      E    +T G G D   +  G 
Sbjct: 157 AG-ARVIVTDRSDEKLELAKELGADHVIDYKEED----LEEELRLTGGGGADVVIDAVGG 211

Query: 273 PSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTL 332
           P  L++AL   + G G+++V+G         ++  L     T+ G+T G   T+ D    
Sbjct: 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGG---TREDFEEA 267

Query: 333 LD 334
           LD
Sbjct: 268 LD 269

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  190 bits (485), Expect = 1e-57
 Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 25/370 (6%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTD--ILCSEGFPAPLYPRVLGH 67
           KA V +  G  +++EE     P   +V +++    +C +D  I        P    +LGH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 68  EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
           E VG V   G  V+  K GD V+      C  C  C +   NLC          +     
Sbjct: 62  EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG-- 118

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 187
                            ++EY+ + A++ +   P     +A+ L+    T Y    + A 
Sbjct: 119 ---------IDGG----FAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAA 165

Query: 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247
           V  G +V V+G G +GL A+  A++ GA+ +I +D++P + E  K  G  D +    E +
Sbjct: 166 VRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDD 225

Query: 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 307
                 +  +T G G D   E  G P  L +ALE  + G G V+V+GV     +PL    
Sbjct: 226 --AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGL 282

Query: 308 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL--KQ 365
           +     TL+G+       + D    LD   + +    +L+TH + L++  +A +L   ++
Sbjct: 283 VVSKELTLRGSLRPS--GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRK 340

Query: 366 PDCVKVLITI 375
            + +KV++  
Sbjct: 341 EEAIKVVLKP 350

Length = 350

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  183 bits (468), Expect = 7e-55
 Identities = 102/378 (26%), Positives = 168/378 (44%), Gaps = 30/378 (7%)

Query: 9   CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGH 67
            +A V  G G+PL++ E+ +   +   V V++  A VC +D+    G  P    P +LGH
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60

Query: 68  EGVGVVESAGDEV------KEVKEGDIVIPTYIGECKECENCTSEMTNLCL---KYPIAL 118
           EGVG V + G  V      + +K GD V  +    C  C  C       C    KY    
Sbjct: 61  EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEA 120

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTT 177
                 S     + G           ++E++ +     +V+V  ++    A+  +C   T
Sbjct: 121 ------SCDDPHLSG----------GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALAT 164

Query: 178 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 237
              A  +   V  G +V V G G +GL AV  A++ GA ++I ID +P + E  + FG  
Sbjct: 165 VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGAD 224

Query: 238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 297
             I+ D+ P+     +V+ IT G G D   E +G P+ + E LE  + G G  +++G   
Sbjct: 225 ATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVA 283

Query: 298 DA-MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
            A  VPL+   +     T+ G               L++ +   F   +L+TH   LE+I
Sbjct: 284 PAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQ-DRFPFAELVTHRYPLEDI 342

Query: 357 DKAIQLLKQPDCVKVLIT 374
           ++A++L +    +KV+I 
Sbjct: 343 NEALELAESGTALKVVID 360

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  183 bits (467), Expect = 9e-55
 Identities = 111/365 (30%), Positives = 171/365 (46%), Gaps = 14/365 (3%)

Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGH 67
           T + V+    G P+++E I V  P   EV V +    VCHTD+   EG     +P +LGH
Sbjct: 1   TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEFPFLLGH 60

Query: 68  EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
           E  GVVE+ G+ V +V  GD V+  +   C +C  C       C     A   + L    
Sbjct: 61  EAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTD-- 118

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 187
                G +L        ++E  ++ A    KVDP+ DP+ A  L CG   G GAA     
Sbjct: 119 -----GTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGG 173

Query: 188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-DDEP 246
           V++G SVAV+G G VG  A+ GA + GA+KII +D +  K E  + FG T  +N    +P
Sbjct: 174 VKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDP 233

Query: 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM-VPLNV 305
            ++I  L    T G G D   +  G P    +A     +  G V+++GV    M + L +
Sbjct: 234 VEAIRAL----TGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPL 288

Query: 306 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
           + +   G  LK + +G    + D P L+D        L   +T  + L+++++A   +  
Sbjct: 289 LDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHA 348

Query: 366 PDCVK 370
            D ++
Sbjct: 349 GDVLR 353

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  172 bits (439), Expect = 1e-50
 Identities = 115/374 (30%), Positives = 169/374 (45%), Gaps = 36/374 (9%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPK---STEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVL 65
           KA+V  G G   K+   +V  PK     +  V++   S+C +D+ +   G P   +  +L
Sbjct: 2   KALVYLGPG---KIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMIL 58

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           GHE VG V   G +VK +K GD V    I  C  C  C       C       NGL    
Sbjct: 59  GHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCE------NGLWGWK 112

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYM-VIDANY-VVKVDPSIDPSDASFLSCGFTTGYGAAW 183
                  GQ           +EY+ V  A+  + K+   +   DA  LS    TG+  A 
Sbjct: 113 LGNRIDGGQ-----------AEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA- 160

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           + A ++ GS+VAV+G G VGL AV GAR+ GAA+II +D NP + +  K  G TD INP 
Sbjct: 161 ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 303
           +     I E +  +T G GVD   E  G      +A++  + G G +  +GV        
Sbjct: 221 NGD---IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLP 276

Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
            +        T K    G +  ++ +P LLD  +  +    +L+TH   L++I KA +L 
Sbjct: 277 LLGEWFGKNLTFKT---GLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLF 333

Query: 364 KQ--PDCVKVLITI 375
                 C+KV+I  
Sbjct: 334 DNKPDGCIKVVIRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  167 bits (424), Expect = 1e-48
 Identities = 98/375 (26%), Positives = 164/375 (43%), Gaps = 43/375 (11%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHE 68
           KA V  G  + +++EE+ V  P   EV VK+    +C TD+     G      PR+LGHE
Sbjct: 2   KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
             G +   GD V   K GD V       C EC  C     N+C  Y              
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNY-------------- 106

Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDANYVV-----KVDPSIDPSDASF---LSCGFTTGYG 180
                +K  +++    ++EY+ + A  V      K+  ++   +A+    L+C       
Sbjct: 107 -----KKFGNLYDGG-FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI----- 155

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
            A ++A ++ G +V V+G G +GL     A+  GA K+I  D N ++ E  K  G    I
Sbjct: 156 NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDA 299
           +  +E    + E V+ +T G G D     TG P   ++ALE  + G G+++  G     +
Sbjct: 216 DAAEE---DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGS 271

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
            V ++   +     T+ G+      +  D    L+   + +  +  L+TH   LE+I++A
Sbjct: 272 TVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEA 328

Query: 360 IQLLKQPDCVKVLIT 374
            +L      +K++IT
Sbjct: 329 FELAADGKSLKIVIT 343

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  165 bits (421), Expect = 4e-48
 Identities = 103/352 (29%), Positives = 153/352 (43%), Gaps = 35/352 (9%)

Query: 16  GLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLY-PRVLGHEGVGVV 73
           G    L +EE+ V  P   EV VK+  A VCH+D+ +   G P     P  LGHE  G V
Sbjct: 9   GSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTV 68

Query: 74  ESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRG 133
              G  V   K GD V    +  C  C  C     NLCL      N  M      + + G
Sbjct: 69  VEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCL------NQGMPG----LGIDG 118

Query: 134 QKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSS 193
                      ++EY+V+ A  +V V   +  + A+  +    T Y A  +  +V+ G +
Sbjct: 119 ----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGET 168

Query: 194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISEL 253
           V V+GLG +GL AV  A+  G A +I +D    K E  K  G  + +N  D+  K     
Sbjct: 169 VLVIGLGGLGLNAVQIAKAMG-AAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAA 227

Query: 254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR 313
             G     G D  F+  G      +A +  K G G+++V+G+G D  + +++  L     
Sbjct: 228 GLGG----GFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDK-LTVDLSDLIAREL 281

Query: 314 TLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
            + G +FGG  T  DLP +LD       KL         L+EI + ++ L +
Sbjct: 282 RIIG-SFGG--TPEDLPEVLDLIAKG--KL-DPQVETRPLDEIPEVLERLHK 327

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  160 bits (407), Expect = 1e-45
 Identities = 116/408 (28%), Positives = 186/408 (45%), Gaps = 67/408 (16%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPK---STEVRVKMLYASVCHTDILCSEGFPAPLYP-RVL 65
           KA+V  G      V   +V  PK    T+  V++   ++C +D+    G+   +    +L
Sbjct: 2   KALVWHG---KGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDIL 58

Query: 66  GHEGVGVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHE +GVVE  G EV+ +K GD +V+P  I  C EC  C   + + C            D
Sbjct: 59  GHEFMGVVEEVGPEVRNLKVGDRVVVPFTIA-CGECFYCKRGLYSQC------------D 105

Query: 125 STSRMSVRGQKLYH-----IFSCS--------TWSEYM-VIDANY-VVKVDPSIDPSDAS 169
           +T+  S    KLY      IF  S          +EY+ V  A+    K+   +    A 
Sbjct: 106 NTNP-SAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKAL 164

Query: 170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE 229
           FLS    TGY AA + A+V+ G +VAV G G VGL A   A++ GA ++I ID+ P + E
Sbjct: 165 FLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLE 223

Query: 230 KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV----------------- 272
             ++    + IN ++  +  + E ++ +T G G D C +  G+                 
Sbjct: 224 MARSHLGAETINFEEVDD--VVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKL 281

Query: 273 ----PSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSD 328
               P  L EA++  + G G V +IGV    +    + A    G TL+    G    +  
Sbjct: 282 ETDRPDALREAIQAVRKG-GTVSIIGVYGGTVNKFPIGAAMNKGLTLRM---GQTHVQRY 337

Query: 329 LPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL--KQPDCVKVLIT 374
           LP LL+  ++ E     ++TH + LE+  +A ++   K+  C+KV++ 
Sbjct: 338 LPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  159 bits (405), Expect = 1e-45
 Identities = 93/384 (24%), Positives = 164/384 (42%), Gaps = 53/384 (13%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTD--------ILCSEGFPAPL- 60
           KA    G  + ++VEE+   P K  EV++K+ +  +C +D        I         L 
Sbjct: 2   KAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLT 60

Query: 61  ---YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA 117
               P  LGHE  GVV   G  V   K GD V+     +C  C  C   + NLC    + 
Sbjct: 61  GETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDS--LG 118

Query: 118 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCG 174
             GL                       ++EY+V+ A +V K+  ++   +A+    L+  
Sbjct: 119 FIGLG-----------------GGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVA 161

Query: 175 FTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF 234
           +      A + +  + G +  VLG G +GL  +   +  GA+KII  + +  ++E  +  
Sbjct: 162 WH-----AVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216

Query: 235 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
           G T  ++P +     +   V+ +T G GVD  F+C GV + L  A++  +   G  + + 
Sbjct: 217 GATIVLDPTEV---DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVA 272

Query: 295 V-GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 353
           +         N + L    +TL G+      T+ D   ++D   + +     L+T  + L
Sbjct: 273 IWEKPISFNPNDLVL--KEKTLTGSI---CYTREDFEEVIDLLASGKIDAEPLITSRIPL 327

Query: 354 EEI-DKAIQ-LLKQPD-CVKVLIT 374
           E+I +K  + L+   +  VK+L++
Sbjct: 328 EDIVEKGFEELINDKEQHVKILVS 351

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  158 bits (401), Expect = 3e-45
 Identities = 98/355 (27%), Positives = 155/355 (43%), Gaps = 33/355 (9%)

Query: 23  VEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVL-GHEGVGVVESAGDEV 80
           + E  V  P   EV +++  + +C +D+     G  AP Y  V+ GHE  GVV + G  V
Sbjct: 14  LREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGV 73

Query: 81  KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIF 140
              + GD V+  +   C  C NC      LC     A  G   D                
Sbjct: 74  THFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAY-GWNRDGG-------------- 118

Query: 141 SCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG 200
                +EYM++    ++ +   +  +D + L CG  T Y A  +   V    +V V+G G
Sbjct: 119 ----HAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAG 173

Query: 201 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG 260
            VGLGA+  AR  GA  +IG+D +P + E  KA G    IN   +  + I EL    T G
Sbjct: 174 PVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIREL----TSG 229

Query: 261 MGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGGRTLKGTT 319
            G D   EC+G  +    ALE  +   G+++++G G    + + V   L    RTL G+ 
Sbjct: 230 AGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEG--GELTIEVSNDLIRKQRTLIGSW 286

Query: 320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374
           +  +    +    L +    + ++ +L+TH   L++  +A  L  Q +  KV+  
Sbjct: 287 YFSVPDMEECAEFLAR---HKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFV 338

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  157 bits (399), Expect = 8e-45
 Identities = 104/377 (27%), Positives = 160/377 (42%), Gaps = 38/377 (10%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHE 68
           KA    G+G+     E  +      +  V+    + C +D+     G P   +  +LGHE
Sbjct: 2   KAFAMLGIGKV-GWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            VGVVE  G EVK+ K GD VI   I              +          G ML     
Sbjct: 61  AVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQS--------GGMLG---- 108

Query: 129 MSVRGQKLYHIFSCSTWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
               G K +  F    ++EY  +   DAN +  +   +    A  L    +TG+  A + 
Sbjct: 109 ----GWK-FSNFKDGVFAEYFHVNDADAN-LAPLPDGLTDEQAVMLPDMMSTGFHGA-EL 161

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           A ++ G +VAV G+G VGL AV GAR+ GA +II +   P + E  K +G TD ++    
Sbjct: 162 ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK-- 219

Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLN 304
            N  + E +  +T G GVD      G      +AL+  K G G +  +   G D  +P+ 
Sbjct: 220 -NGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIP 277

Query: 305 VIALACG--GRTLKGT-TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHV-KLEEIDKAI 360
                 G   +T+ G    GG   +  +  L    +       +LLTHH    ++I++A+
Sbjct: 278 REEWGVGMGHKTINGGLCPGG---RLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEAL 334

Query: 361 QLL--KQPDCVKVLITI 375
            L+  K  D +K +I  
Sbjct: 335 MLMKDKPDDLIKPVIIF 351

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  157 bits (398), Expect = 9e-45
 Identities = 109/363 (30%), Positives = 160/363 (44%), Gaps = 51/363 (14%)

Query: 10  KAVVCWGLGEPLKVEEI---QVEPPKSTEVRVKMLYASVCHTD--IL------CSEGFPA 58
           KA+V  G G+ +  E+     ++ P  T+  VKML  ++C TD  IL       + G   
Sbjct: 2   KALVYHGPGK-ISWEDRPKPTIQEP--TDAIVKMLKTTICGTDLHILKGDVPTVTPG--- 55

Query: 59  PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL 118
               R+LGHEGVGVVE  G  V   K GD V+ + I  C  C  C   + + C      L
Sbjct: 56  ----RILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWIL 111

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVKVDPSIDPSDASFLSCGFTT 177
            G ++D T    VR                 +  A N + K+   +D   A  LS    T
Sbjct: 112 -GNLIDGTQAEYVR-----------------IPHADNSLYKLPEGVDEEAAVMLSDILPT 153

Query: 178 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 237
           GY       KV+ G +VA++G G VGL A+  A+++  +KII +D +  + E  K  G T
Sbjct: 154 GYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGAT 213

Query: 238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-G 296
             +N          E V  +T G GVD   E  G+P+      E    G G +  +GV G
Sbjct: 214 HTVNSAKG---DAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG 269

Query: 297 VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
               + L  + +    + +  TT  G+   +  P LL    + +    +L+TH  KL EI
Sbjct: 270 KPVDLHLEKLWI----KNITITT--GLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEI 323

Query: 357 DKA 359
           +KA
Sbjct: 324 EKA 326

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  156 bits (396), Expect = 2e-44
 Identities = 104/378 (27%), Positives = 167/378 (44%), Gaps = 54/378 (14%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPP--KSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLG 66
           KA+VC    +P ++E + +  P   + EV V++    +C +D+    G  P   YPR+LG
Sbjct: 2   KALVC---EKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILG 58

Query: 67  HEGVGVVESAGDEVKEVKEGDIV--IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           HE  G V   G+ V  +K GD V   P YI  C EC  C     N C             
Sbjct: 59  HELSGEVVEVGEGVAGLKVGDRVVVDP-YI-SCGECYACRKGRPNCC------------- 103

Query: 125 STSRMSVRGQKLYHI---FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
               + V G    H    F     +EY+V+ A+ ++  +  +    A+ +      G  A
Sbjct: 104 --ENLQVLG---VHRDGGF-----AEYIVVPADALLVPE-GLSLDQAALVEP-LAIGAHA 151

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
             + A V  G +V V+G G +GLG +  A+  G A++I +D +  + E  +  G  D IN
Sbjct: 152 VRR-AGVTAGDTVLVVGAGPIGLGVIQVAKARG-ARVIVVDIDDERLEFARELGADDTIN 209

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 301
             DE        ++ +T G G D   + TG P+ + EA+E    G G+V+++G+     V
Sbjct: 210 VGDEDVA---ARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGL-SKGPV 264

Query: 302 PLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
                         K  T  G +  T+ D P ++D  ++ +     L+TH    E++ +A
Sbjct: 265 TFPDPEF-----HKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEA 319

Query: 360 IQLLKQPD--CVKVLITI 375
             L + P    +KVLI  
Sbjct: 320 FDLWEAPPGGVIKVLIEF 337

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  155 bits (394), Expect = 3e-44
 Identities = 103/380 (27%), Positives = 164/380 (43%), Gaps = 54/380 (14%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEG 69
           KA+V  G G+ L+ E+I    P   EV VK+    +C +DI    G  A   P VLGHE 
Sbjct: 2   KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEF 60

Query: 70  VGVVESAGDEVKEVKEGDIV-----IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
            G VE  G  V ++  GD V     +P     C +CE C     +LC  Y          
Sbjct: 61  SGTVEEVGSGVDDLAVGDRVAVNPLLP-----CGKCEYCKKGEYSLCSNY---------- 105

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGA 181
                   G +    F+     EY+ + A  ++K+   +D  +A+     +        A
Sbjct: 106 -----DYIGSRRDGAFA-----EYVSVPARNLIKIPDHVDYEEAAMIEPAAVALH----A 151

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
               A +  G +V V+G GT+GL A+   ++ GA ++I +D +  K    +  G  D IN
Sbjct: 152 VRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTIN 210

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM- 300
           P +E      E V+ +T G G D   E  G P+ + +AL   + G GKV+++G+    + 
Sbjct: 211 PKEED----VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVT 265

Query: 301 ---VPLNVIALACGGRTLKGT--TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 355
                   I       T++G+  ++       +  T LD   + + K+  L+TH + LE+
Sbjct: 266 LSEEAFEKILR--KELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLED 323

Query: 356 IDKAIQLLKQ--PDCVKVLI 373
              A + L        KVL+
Sbjct: 324 GPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  152 bits (386), Expect = 6e-43
 Identities = 102/368 (27%), Positives = 158/368 (42%), Gaps = 49/368 (13%)

Query: 9   CKAVVCWGLGE-PLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRVL 65
            KA V    GE P +V+++ V  P   EV VK+  + VCHTD+  + G     P  P + 
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIG 60

Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHEG GVV + G  V  +K GD V +      C +CE C +    LC     +  G  +D
Sbjct: 61  GHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYTVD 118

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                              T++EY + DA YV  +   +    A+ L C   T Y A  K
Sbjct: 119 ------------------GTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL-K 159

Query: 185 EAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           +A ++ G  V + G G  GLG   V  A+  G  ++I ID    K E  K  G   F++ 
Sbjct: 160 KAGLKPGDWVVISGAGG-GLGHLGVQYAKAMG-LRVIAIDVGDEKLELAKELGADAFVDF 217

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
                    E VK +T G G           +   +AL+  + G G ++ +G+     +P
Sbjct: 218 KKS---DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGFIP 273

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLD-----KCKNKEFKLHQLLTHHVKLEEID 357
           L+   L   G T+ G+  G   T+ DL   L+     K K    ++       V LE+++
Sbjct: 274 LDPFDLVLRGITIVGSLVG---TRQDLQEALEFAARGKVK-PHIQV-------VPLEDLN 322

Query: 358 KAIQLLKQ 365
           +  + +++
Sbjct: 323 EVFEKMEE 330

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  150 bits (381), Expect = 3e-42
 Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 48/365 (13%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPR----VL 65
           KA   +  G+PL++E++ V  P   +V V++  A VCH+D+   +G    + P      L
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL---KYPIALNGLM 122
           GHE  G VE  G  V  +KEGD V+      C  C  C     N C       I  +G  
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGF 121

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
                                  +EY+++ +  +VK+   +DP +A+ L+    T Y A 
Sbjct: 122 -----------------------AEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158

Query: 183 WKEAKV-EKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
            K     + GS+V V+G+G  GLG  AV   R    A +I +D++    +  +  G    
Sbjct: 159 KKALPYLDPGSTVVVIGVG--GLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHV 216

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 299
           +N  D+      E V+ +T G G D   +  G    L+ A +    G G+ +++G G   
Sbjct: 217 LNASDDV----VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYG--G 269

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
              L    L     ++ G+ +G   T+++L  ++   ++ + K+         LE+ ++A
Sbjct: 270 HGRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVKVE---ITKFPLEDANEA 323

Query: 360 IQLLK 364
           +  L+
Sbjct: 324 LDRLR 328

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  148 bits (376), Expect = 1e-41
 Identities = 108/368 (29%), Positives = 171/368 (46%), Gaps = 40/368 (10%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHE 68
           KA +     +PL++EE+    P   EV +K+  A VC+ D+L  +G FP   YP +LGHE
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHE 61

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            VG VE  G+ V+  K GD VI  Y   C +CE C S   NLC +      G  +D    
Sbjct: 62  IVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC-RNRAEY-GEEVD---- 115

Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 188
                           ++EY+ +    +VK+  ++    A+  +C   T   A  K A V
Sbjct: 116 --------------GGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-KRAGV 160

Query: 189 EKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247
           +KG +V V G  G VG+ A+  A+  G A++I + ++P K +  K  G    I+      
Sbjct: 161 KKGDTVLVTGAGGGVGIHAIQLAKALG-ARVIAVTRSPEKLKILKELGADYVID-----G 214

Query: 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 307
              SE VK +    G D   E  G P+ + E+L +   G G++++IG       PL    
Sbjct: 215 SKFSEDVKKLG---GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPAPLRPGL 269

Query: 308 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 367
           L      + G+      TK+D+   L   K  + K   ++   V LE+I++A++ LK   
Sbjct: 270 LILKEIRIIGSISA---TKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGK 324

Query: 368 CV-KVLIT 374
            V ++++ 
Sbjct: 325 VVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  145 bits (369), Expect = 1e-40
 Identities = 107/390 (27%), Positives = 162/390 (41%), Gaps = 82/390 (21%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEG 69
           KA+V  G GE L+VEE+ V  P   EV +K+    +C TD+   EG      P V GHE 
Sbjct: 2   KALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEF 60

Query: 70  VGVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLK---YPIALNGLMLD 124
            GVV + G +V   K GD V   P     C EC  C     NLC       +  NG    
Sbjct: 61  AGVVVAVGSKVTGFKVGDRVAVDPNIY--CGECFYCRRGRPNLCENLTAVGVTRNG---- 114

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGA 181
                   G           ++EY+V+ A  V K+  ++   +A+    LSC       A
Sbjct: 115 --------G-----------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC-------A 148

Query: 182 AW--KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
                   ++ G SV V G G +GL      +++GA+++   + N  K E  K  G T+ 
Sbjct: 149 VHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATET 208

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VD 298
           ++P  E  ++  E         G D   E TGVP  L +A+E  + G G V+V GV   D
Sbjct: 209 VDPSREDPEAQKEDNPY-----GFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPD 262

Query: 299 AMVPLN--------------VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLH 344
           A V ++               I      R +                LL+  K     + 
Sbjct: 263 ARVSISPFEIFQKELTIIGSFINPYTFPRAIA---------------LLESGK---IDVK 304

Query: 345 QLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374
            L++H + LEE+ +A++ ++    +KV++ 
Sbjct: 305 GLVSHRLPLEEVPEALEGMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  143 bits (362), Expect = 2e-39
 Identities = 93/376 (24%), Positives = 153/376 (40%), Gaps = 67/376 (17%)

Query: 21  LKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEG------FPAPLYPRVLGHEGVGVV 73
           L++EE  +  P   EV V++    +C +D+     G         P+   VLGHE  G V
Sbjct: 10  LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPM---VLGHESAGTV 66

Query: 74  ESAGDEVKEVKEGDIV-----IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            + G  V  +K GD V     +P     C+ CE C S   NLC                 
Sbjct: 67  VAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLCP---------------- 105

Query: 129 MSVRGQKLYHIFSCST------WSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGY 179
                     +   +T         Y+   A++  K+  ++   + +    LS G     
Sbjct: 106 ---------DMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGV---- 152

Query: 180 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
             A + A V  G +V V G G +GL     A+  GA K++  D +P + E  K  G T  
Sbjct: 153 -HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHT 211

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 299
           +N   E     +E +  +  G G D   ECTG  S +  A+  T+ G G V+++G+G   
Sbjct: 212 VNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP- 269

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
            V L + A +     ++G      +  +  PT ++   + +  +  L+TH   LE+  +A
Sbjct: 270 EVTLPLSAASLREIDIRGV----FRYANTYPTAIELLASGKVDVKPLITHRFPLEDAVEA 325

Query: 360 IQLLKQP--DCVKVLI 373
            +   +     +KV+I
Sbjct: 326 FETAAKGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  141 bits (358), Expect = 8e-39
 Identities = 104/365 (28%), Positives = 160/365 (43%), Gaps = 52/365 (14%)

Query: 18  GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-------------PAPLYPRV 64
           G+PL+  EI    P  TEV VK+    VCH+D+   +G                   P V
Sbjct: 10  GKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLV 69

Query: 65  LGHEGVGVVESAGDEVKEVKEGD--IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
           LGHE VG V + G +  +VK GD  +V P +IG C EC  C +   NLC K   AL    
Sbjct: 70  LGHEIVGEVVAVGPDAADVKVGDKVLVYP-WIG-CGECPVCLAGDENLCAK-GRALG--- 123

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
                           IF    ++EY+++  +  +     +DP+ A+ L+C   T Y A 
Sbjct: 124 ----------------IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAV 167

Query: 183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
            K   +     V ++G G +GL A+   +  G A II +D +  K E  KA G    +N 
Sbjct: 168 KKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG 227

Query: 243 DDE-PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAM 300
            D    K I +   G     GVD   +     +  S A +    G GK++++G+ G +A 
Sbjct: 228 SDPDAAKRIIKAAGG-----GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEAT 281

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
           +PL ++ L     T++G+  G ++   +L  L      K  KL  +      L +++ A+
Sbjct: 282 LPLPLLPL--RALTIQGSYVGSLEELRELVALA-----KAGKLKPIPLTERPLSDVNDAL 334

Query: 361 QLLKQ 365
             LK 
Sbjct: 335 DDLKA 339

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 1e-38
 Identities = 115/371 (30%), Positives = 166/371 (44%), Gaps = 44/371 (11%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHE 68
           KAV+  G  +  ++EE+    P   EV +K+ YA +C+ D+L  +GF P   YP +LGHE
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHE 61

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            VG VE  G+ VK  K GD V          CE C S     C               +R
Sbjct: 62  VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC--------------KNR 107

Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 188
           +   G++L   F     +EY  +    +VKV P++    A  + C     Y    + A V
Sbjct: 108 LGY-GEELDGFF-----AEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RRAGV 160

Query: 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247
           +KG +V V G  G VG+ A+  A+  G AK+I +  +  K +    +   D++       
Sbjct: 161 KKGETVLVTGAGGGVGIHAIQVAKALG-AKVIAVTSSESKAKIVSKYA--DYV----IVG 213

Query: 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 307
              SE VK I    G D   E  G P+ L E+L +  +G GK+I IG  VD   P    +
Sbjct: 214 SKFSEEVKKIG---GADIVIETVGTPT-LEESLRSLNMG-GKIIQIG-NVD---PSPTYS 264

Query: 308 LACGGRTLKGTTFGGI--KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
           L  G   LK     G    TK D+   L      E K+  ++   V L EIDKA++ LK 
Sbjct: 265 LRLGYIILKDIEIIGHISATKRDVEEALKLV--AEGKIKPVIGAEVSLSEIDKALEELKD 322

Query: 366 PDCV-KVLITI 375
              + K+L+  
Sbjct: 323 KSRIGKILVKP 333

Length = 334

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  139 bits (352), Expect = 4e-38
 Identities = 108/369 (29%), Positives = 167/369 (45%), Gaps = 31/369 (8%)

Query: 10  KAVVCWGLGEPLKVEEIQV-EPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHE 68
           KAVV  G G+ ++VEE+ + +    T+  VK+  A++C +D+    G        VLGHE
Sbjct: 2   KAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            VG V   G EV+ +K GD V+  +   C EC  C    +  C K      G +      
Sbjct: 61  FVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAK------GGLFGYAGS 114

Query: 129 MSVRGQKLYHIFSCSTWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
            ++ G +          +EY+ +   D   ++K+   +    A  L     TGY  A K 
Sbjct: 115 PNLDGAQ----------AEYVRVPFADGT-LLKLPDGLSDEAALLLGDILPTGYFGA-KR 162

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           A+V  G +VAV+G G VGL AV  A++ GAA++  +D  P + E+  A G  + IN +D 
Sbjct: 163 AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFEDA 221

Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 305
                 E V+  T G G D   E  G  + L  A +  + G G +  +GV      P   
Sbjct: 222 EPV---ERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPG 277

Query: 306 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
           +       TL+   FG    +S  P LL   ++    L  L+ H + LEE  +A +L  +
Sbjct: 278 LDAYNKNLTLR---FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDK 334

Query: 366 PDCVKVLIT 374
              +KV++ 
Sbjct: 335 RKVLKVVLD 343

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  137 bits (348), Expect = 1e-37
 Identities = 98/330 (29%), Positives = 145/330 (43%), Gaps = 42/330 (12%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHE 68
           KA V    G PL+ EE+ V  P   EV +K+    VCHTD+  +EG +    YP V GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKY---PIALNGLMLD 124
            VG V   G  V+  K GD V +   +G C  CE C   + NLC K         G    
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQG---- 116

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                               ++EYMV DA Y V +   +  + A+ L C   T Y +A +
Sbjct: 117 -------------------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVY-SALR 156

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
           +A    G  VAVLG+G +G  AV  AR  G  + + I ++P K+E  +  G  + ++   
Sbjct: 157 DAGPRPGERVAVLGIGGLGHLAVQYARAMG-FETVAITRSPDKRELARKLGADEVVD--- 212

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 304
               S +EL +    G G D         +    AL   + G G+++++G+        +
Sbjct: 213 ----SGAELDEQAAAG-GADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPD 266

Query: 305 VIALACGGRTLKGTTFGGIKTKSDLPTLLD 334
           +  L    +++ G+T GG     DL   LD
Sbjct: 267 IFPLIMKRQSIAGSTHGGRA---DLQEALD 293

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  137 bits (348), Expect = 2e-37
 Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 31/311 (9%)

Query: 18  GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESA 76
              L+    +  P    +V +K+ Y  VCH+D+      +    YP V GHE VG+V + 
Sbjct: 9   SGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAV 68

Query: 77  GDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK 135
           G +V + K GD V +   +  C  CE C S     C K  +  NG   D T         
Sbjct: 69  GSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGT--------- 119

Query: 136 LYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVA 195
                +   +++++V+D  +V K+   +D + A+ L C   T Y +  K   V  G  V 
Sbjct: 120 ----ITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVY-SPLKRNGVGPGKRVG 174

Query: 196 VLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISEL 253
           V+G+G  GLG  AV  A+  G A++    ++P KKE     G  +FI   D         
Sbjct: 175 VVGIG--GLGHLAVKFAKALG-AEVTAFSRSPSKKEDALKLGADEFIATKDPEAMK---- 227

Query: 254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR 313
                    +D   +       L   L   K G G ++++G   + + P+    L  G +
Sbjct: 228 ----KAAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL-PVPPFPLIFGRK 281

Query: 314 TLKGTTFGGIK 324
           ++ G+  GG K
Sbjct: 282 SVAGSLIGGRK 292

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  132 bits (334), Expect = 2e-35
 Identities = 87/354 (24%), Positives = 151/354 (42%), Gaps = 37/354 (10%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHE 68
           +A V    GEPL++ E+    P    V V++    VC +D    +G  P    P V GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
             GVV   G++V   + GD V   ++  C  C  C +  +N+C                 
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVC---------------EH 106

Query: 129 MSVRGQKLYHIFSC-STWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
               G      F+   +++EY+ +   D N +V++   +D   A+ L C F T + A   
Sbjct: 107 QVQPG------FTHPGSFAEYVAVPRADVN-LVRLPDDVDFVTAAGLGCRFATAFRALVH 159

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
           +A+V+ G  VAV G G VGL AV  A   G A++I +D +  K E  +  G    +N  +
Sbjct: 160 QARVKPGEWVAVHGCGGVGLSAVMIASALG-ARVIAVDIDDDKLELARELGAVATVNASE 218

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVP 302
             +  ++  V+ +T G G     +  G+P     ++ + +   G+ + +G+  G +A V 
Sbjct: 219 VED--VAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVA 274

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
           L +  +      + G + G          +L    + +     L+   + L+E 
Sbjct: 275 LPMDRVVARELEIVG-SHG--MPAHRYDAMLALIASGKLDPEPLVGRTISLDEA 325

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  126 bits (319), Expect = 2e-33
 Identities = 96/377 (25%), Positives = 144/377 (38%), Gaps = 63/377 (16%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--YPRVL 65
           KAVV    G P  LKV E+    P   EV V++  A V   D+L  +G   P+   P + 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           G E  GVV + G  V   K GD V                          +  +G     
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRVAALG---------------------GVGRDG----- 95

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
                              ++EY+V+ A+++V +   +   +A+ L     T + A +  
Sbjct: 96  ------------------GYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDR 137

Query: 186 AKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
           A ++ G +V V G  G VG  A+  A+  GA  +  +     K E  K  G    IN  +
Sbjct: 138 AGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-SEKLELLKELGADHVINYRE 196

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPL 303
           E      E V+ +T G GVD   +  G     + +L     G G+++ IG       VPL
Sbjct: 197 E---DFVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPPVPL 251

Query: 304 NVIALACGGRTLKGTTFGG---IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
           N++ L     TL+G T G          L  L D       KL  ++     L E   A 
Sbjct: 252 NLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLL--ASGKLKPVIDRVYPLAEAPAAA 309

Query: 361 -QLLKQPDCV-KVLITI 375
             LL +     KV++ +
Sbjct: 310 AHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  124 bits (313), Expect = 3e-32
 Identities = 103/394 (26%), Positives = 159/394 (40%), Gaps = 52/394 (13%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPK---STEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           KAVV    G P  V    V  PK    T+  V++   ++C +D+    G        VLG
Sbjct: 2   KAVV---YGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLG 58

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           HE +G VE  G  V+ +K GD V+  +   C  C NC   +T +CL       G      
Sbjct: 59  HEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYV 118

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVI---DANYVV--KVDPSIDPSDASFLSCGFTTGYGA 181
                 G            +EY+ +   D N +     D + +  D   LS  F TG+  
Sbjct: 119 DMGPYGG----------GQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHG 168

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DF 239
             + A V+ G +VAV G G VGL A   A + GA+++  +D  P + +  ++ G    DF
Sbjct: 169 L-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDF 227

Query: 240 INPDDEPNKSISELVKGITHGM---GVDYC-FECTG-----VPSL-LSEALETTKVGKGK 289
            + D        E + G+  G     VD   +E         P+L L++ +  T+ G G 
Sbjct: 228 SDGDP------VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GG 280

Query: 290 VIVIGV--------GVDAMVPLNVIALACGGRTLKGTTFG-GI-KTKSDLPTLLDKCKNK 339
           + ++GV        G  A      ++   G    KG +FG G    K     L D     
Sbjct: 281 IGIVGVYVAEDPGAGDAAAKQGE-LSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAG 339

Query: 340 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 373
             K   +++H + LE+  +A     +    KV+I
Sbjct: 340 RAKPSFVVSHVISLEDAPEAYARFDKRLETKVVI 373

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  122 bits (308), Expect = 7e-32
 Identities = 96/373 (25%), Positives = 161/373 (43%), Gaps = 39/373 (10%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG--FPAPLYPRVL 65
           KAVV  G G P  L+  ++    P   EV V++  A++ H D+    G        P +L
Sbjct: 2   KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHIL 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIG-ECKECENCTSEMTNLCLKYPIALNGLMLD 124
           G +G GVVE+ G  V  VK G  V+  Y G  C  CE C +   NLC +Y I   G  +D
Sbjct: 62  GSDGAGVVEAVGPGVTNVKPGQRVV-IYPGISCGRCEYCLAGRENLCAQYGIL--GEHVD 118

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                                +EY+ + A  ++ +  ++   +A+     F T +     
Sbjct: 119 GGY------------------AEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160

Query: 185 EAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
            A++  G +V V G G+ VG  A+  A++ G A +I    +  K E+ K  G    I+  
Sbjct: 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFG-ATVIATAGSEDKLERAKELGADYVIDYR 219

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 303
            E        V+ +T   GVD   E  G  +   ++L++   G G+++  G       P+
Sbjct: 220 KED---FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGYEAPI 274

Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
           ++  +     ++ G+T G   TK++L   L        KL  ++     LEE  +A + L
Sbjct: 275 DLRHVFWRQLSILGSTMG---TKAELDEALRLVFRG--KLKPVIDSVFPLEEAAEAHRRL 329

Query: 364 KQPDCV-KVLITI 375
           +  +   K+++T 
Sbjct: 330 ESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  122 bits (308), Expect = 8e-32
 Identities = 108/381 (28%), Positives = 168/381 (44%), Gaps = 56/381 (14%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC------SEGFPAPLYPR 63
           KA+V    G   ++ E+ V  P   EV +K+L AS+C TD+        ++    P  P 
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP--PL 59

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
           + GHE  G V   G+ V  VK GD V   T+I  C +C  C +   ++C    I    L 
Sbjct: 60  IFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIV-CGKCYQCRTGNYHVCQNTKI----LG 114

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
           +D+                   ++EY+V+    + K D  I P  AS          G A
Sbjct: 115 VDTDG----------------CFAEYVVVPEENLWKNDKDIPPEIASIQE-----PLGNA 153

Query: 183 WKEAKVE--KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
                     G SV + G G +GL A+  A+  GA+ +I  D NP++ E  K  G    I
Sbjct: 154 VHTVLAGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVI 213

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 300
           NP +E        VK +T G GVD   E +G P  + + L+    G G+V ++G+     
Sbjct: 214 NPREEDVV----EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGL-PPGP 267

Query: 301 VPLNVIALACGGRTLKGTTFGGI------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
           V +++  L       KG T  GI      +T   +  LL   K+ +  L  ++TH + LE
Sbjct: 268 VDIDLNNLV----IFKGLTVQGITGRKMFETWYQVSALL---KSGKVDLSPVITHKLPLE 320

Query: 355 EIDKAIQLLKQPDCVKVLITI 375
           + ++A +L++   C KV++  
Sbjct: 321 DFEEAFELMRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  122 bits (307), Expect = 1e-31
 Identities = 105/375 (28%), Positives = 161/375 (42%), Gaps = 40/375 (10%)

Query: 10  KAVVCWGLGEPLKVEEI---QVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           +A V  G G+ ++VEE+    +E P  T+  ++++   VC +D+    G      P  +G
Sbjct: 2   RATVIHGPGD-IRVEEVPDPVIEEP--TDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIG 58

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           HE VGVVE  G EV  VK GD VI  +      C  C +  T  C+              
Sbjct: 59  HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVH---------GGFW 109

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANY-VVKVDPSIDPSD---ASFLSCG--FTTGYG 180
                 GQ  Y            V  A+  +VKV  S    +    S L+      TG+ 
Sbjct: 110 GAFVDGGQGEY----------VRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHH 159

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
           AA   A V  GS+V V+G G VGL AV  A+  GA +II + ++  ++   + FG TD +
Sbjct: 160 AA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIV 218

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 300
               E  +     V+ +T G+G D   EC G    + +A+   + G G+V  +GV     
Sbjct: 219 ---AERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG- 273

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
           V L+V  L      L G   G    +  LP LLD          ++    + L+E+ +  
Sbjct: 274 VELDVRELFFRNVGLAG---GPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGY 330

Query: 361 QLLKQPDCVKVLITI 375
           + + +   +KVL+  
Sbjct: 331 RAMDERRAIKVLLRP 345

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  118 bits (298), Expect = 4e-30
 Identities = 87/370 (23%), Positives = 148/370 (40%), Gaps = 42/370 (11%)

Query: 21  LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-------FPA-PLYPRVLGHEGVGV 72
           L+VE++ V   K  E+ +++    +C +DI   E        +P    +P V+GHE  GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 73  VESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVR 132
           VE  G  VK  ++GD V    +  C  C  C S   N C    +   G   D        
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKN--LKELGFSADGA------ 150

Query: 133 GQKLYHIFSCSTWSEYMVIDANYVVKVDPSID--PSDASFLSCGFTTGYGAAW-----KE 185
                       ++EY+ ++A Y  +++   +    D +F +         A+     + 
Sbjct: 151 ------------FAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRG 198

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
                G+ V V G G +GL A+  A+  GA+K+I  + +  ++   K  G     NP   
Sbjct: 199 GGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKM 258

Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 305
            +    E V  +T G G D   E  G P      +E +    GK++ IG      VPL++
Sbjct: 259 RDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRA-ATTVPLHL 317

Query: 306 IALACGGRTLKGTTFG--GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
             L       +    G  G       P+++    + +  + +++T    LE I +AI+  
Sbjct: 318 EVLQVR----RAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAA 373

Query: 364 KQPDCVKVLI 373
            +    K+ I
Sbjct: 374 SERTDGKITI 383

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  115 bits (291), Expect = 1e-29
 Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 44/319 (13%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKST--EVRVKMLYASVCHTDILCSEGFPAPL-YPRVLG 66
           KA+V  G G P  VE  +V  P+    EV +K+  A +C +D+   +G   P+  P VLG
Sbjct: 2   KALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLG 60

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLC---LKYPIALNGLM 122
           HE  G +   G +V+  K GD V+       C  C  C     NLC          +G  
Sbjct: 61  HEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGF 120

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGY 179
                                  +EY+++    + ++  ++    A+    L+       
Sbjct: 121 -----------------------AEYVLVPEESLHELPENLSLEAAALTEPLAV----AV 153

Query: 180 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII-GIDKNPWKKEKGKAFGMTD 238
            A  + + +  G +V V G G +GL A   A++ GA  ++ G +K+  + +  K  G   
Sbjct: 154 HAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA 213

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
            +N  +E    ++ELV  IT G G D   EC+G    L +ALE  + G G+++ +G+   
Sbjct: 214 -VNGGEE---DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP 268

Query: 299 AMVPLNVIALACGGRTLKG 317
               ++V  +     ++ G
Sbjct: 269 LAASIDVERIIQKELSVIG 287

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  107 bits (268), Expect = 3e-28
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 5/134 (3%)

Query: 202 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM 261
           VGL AV  A+  GAA++I +D++  K E  K  G    IN  DE      E V+ +T G 
Sbjct: 2   VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDE---DFVERVRELTGGR 58

Query: 262 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321
           GVD   +C G P+ L +ALE  + G G+V+V+G+   A VP  +  L     T+ G+  G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 322 GIKT-KSDLPTLLD 334
           G +  +  L  L  
Sbjct: 118 GREEFEEALELLAS 131

Length = 131

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  110 bits (278), Expect = 8e-28
 Identities = 83/362 (22%), Positives = 129/362 (35%), Gaps = 68/362 (18%)

Query: 23  VEEIQVEPPKSTEVRVKMLYASVCHTDILC----SEGFPAPLYPRVLGHEGVGVVESAGD 78
           VEE     P   +V V++    VC +D+         F  P  P   GHEG G V + G 
Sbjct: 9   VEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGP 68

Query: 79  EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 138
            V+ +  GD V                      L                          
Sbjct: 69  GVRGLAVGDRV--------------------AGLSGG----------------------- 85

Query: 139 IFSCSTWSEYMVIDANYVVKVDPSID--PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV 196
                 ++EY + DA++ V +   +D        L C         ++   +  G +VAV
Sbjct: 86  -----AFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN-----VFRRGWIRAGKTVAV 135

Query: 197 LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKG 256
           +G G +GL  +  A   GA ++I ID+ P +    +  G T+ +  D E   +I E V+ 
Sbjct: 136 IGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSE---AIVERVRE 192

Query: 257 ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK 316
           +T G G D   E  G    L  A E      G++++ G   D   P+        G  L 
Sbjct: 193 LTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLI 251

Query: 317 GTTFG--GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ-LLKQPD-CVKVL 372
                   I     +   +    +    L  LLTH   LEE+  A +   ++PD  +K +
Sbjct: 252 NAVERDPRIGL-EGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGV 310

Query: 373 IT 374
           I 
Sbjct: 311 IV 312

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  110 bits (277), Expect = 2e-27
 Identities = 94/311 (30%), Positives = 142/311 (45%), Gaps = 37/311 (11%)

Query: 23  VEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKE 82
           V E  + P K  E  VKM Y  VCHTD+  + G       R+LGHEG+G+V+  G  V  
Sbjct: 15  VVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTS 74

Query: 83  VKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFS 141
           +K GD V I  +   C  CE CT+    LC       N       +  +V G        
Sbjct: 75  LKVGDRVSIAWFFEGCGHCEYCTTGRETLCRS---VKN-------AGYTVDG-------- 116

Query: 142 CSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT 201
               +E  ++ A+Y VKV   +DP+ AS ++C   T Y A  K + ++ G  +A+ G G 
Sbjct: 117 --GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGG 173

Query: 202 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN--KSISELVKGITH 259
           +G  A+  A+    AK+I +D N  K    K  G    IN     +  K I E   G  H
Sbjct: 174 LGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGA-H 232

Query: 260 GMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT 318
              V      T V  +  ++A++  + G G+V+ +G+  ++M  L++  L   G  + G+
Sbjct: 233 AAVV------TAVAKAAFNQAVDAVRAG-GRVVAVGLPPESM-DLSIPRLVLDGIEVVGS 284

Query: 319 TFGGIKTKSDL 329
             G   T+ DL
Sbjct: 285 LVG---TRQDL 292

Length = 338

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  110 bits (276), Expect = 2e-27
 Identities = 101/360 (28%), Positives = 153/360 (42%), Gaps = 44/360 (12%)

Query: 10  KAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHE 68
           KA+V    G E LKVE+++   P   EV +++  A V   D            P + G E
Sbjct: 2   KALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPHIPGAE 61

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
             GVVE  GD VK VK+GD V+         C+ C S    LC       NG        
Sbjct: 62  FAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLC------RNG------GI 109

Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 188
           + V             ++EY+V+    + K+  SI    A+ L     T Y A  K A +
Sbjct: 110 IGVVSN--------GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-KTAGL 160

Query: 189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 247
             G +V V G  G  G+ AV  A+M G A++I + +  W KE    FG  + ++ D+   
Sbjct: 161 GPGETVVVFGASGNTGIFAVQLAKMMG-AEVIAVSRKDWLKE----FGADEVVDYDE--- 212

Query: 248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 307
             + E VK IT  M  D      G  S    +L     G G+++  G      V L++  
Sbjct: 213 --VEEKVKEIT-KM-ADVVINSLG-SSFWDLSLSVLGRG-GRLVTFGTLTGGEVKLDLSD 266

Query: 308 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 367
           L     ++ G+T G   T+ +L  L+   K+ + K+ +      KLEE  +A++ L   +
Sbjct: 267 LYSKQISIIGSTGG---TRKELLELVKIAKDLKVKVWKTF----KLEEAKEALKELFSKE 319

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  109 bits (275), Expect = 3e-27
 Identities = 84/332 (25%), Positives = 132/332 (39%), Gaps = 76/332 (22%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHE 68
           KAV     G PL++ E  V  P   EV +K+    VCH+D    EG  P   YPRV GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 69  GVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
            VG +++ G+ V   K GD V +  + G C  C+ C       C    +   G+  D   
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVTRD--- 116

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 187
                            ++EYM+  A  + ++   +D ++A+ L C   T + A  + + 
Sbjct: 117 ---------------GGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL-RNSG 160

Query: 188 VEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
            + G  VAV G+G  GLG  AV  A   G  + + I +   K +  +  G   +I+   E
Sbjct: 161 AKPGDLVAVQGIG--GLGHLAVQYAAKMG-FRTVAISRGSDKADLARKLGAHHYIDTSKE 217

Query: 246 -------------------PN-KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 285
                              PN K+IS LV G+                            
Sbjct: 218 DVAEALQELGGAKLILATAPNAKAISALVGGLAPR------------------------- 252

Query: 286 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKG 317
             GK++++G      V ++ + L  G +++ G
Sbjct: 253 --GKLLILGA-AGEPVAVSPLQLIMGRKSIHG 281

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  109 bits (275), Expect = 4e-27
 Identities = 97/382 (25%), Positives = 144/382 (37%), Gaps = 78/382 (20%)

Query: 21  LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY-------------PRVLGH 67
           L+VEE     P   EVRV++    +C +D+          Y             P VLGH
Sbjct: 9   LRVEERPAPEPGPGEVRVRVAAGGICGSDL---------HYYQHGGFGTVRLREPMVLGH 59

Query: 68  EGVGVVESAGDEVKEVKEGDIVI-----PTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
           E  GVVE+ G  V  +  G  V      P     C  C+ C +   NLC      LN   
Sbjct: 60  EVSGVVEAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCRAGRPNLC------LNMRF 108

Query: 123 LDSTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTG 178
           L S  R   V+G           + EY+V+DA+  V +   +    A+    L+      
Sbjct: 109 LGSAMRFPHVQG----------GFREYLVVDASQCVPLPDGLSLRRAALAEPLAVAL--- 155

Query: 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
              A   A    G  V V G G +G   V  AR  GAA+I+  D         +A G  +
Sbjct: 156 --HAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADE 213

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
            +N   +P      L          D  FE +G P+ L+ AL   + G G V+ +G+   
Sbjct: 214 TVNLARDP------LAAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG 266

Query: 299 AM-VPLNVIALACGGR--TLKGT-TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
            + +PLN +      +   L+G+  F       +    +         +  L+T    LE
Sbjct: 267 PVPLPLNALV----AKELDLRGSFRFD-----DEFAEAVRLLAAGRIDVRPLITAVFPLE 317

Query: 355 EIDKAIQLLK-QPDCVKVLITI 375
           E  +A  L   +   VKV ++ 
Sbjct: 318 EAAEAFALAADRTRSVKVQLSF 339

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  106 bits (266), Expect = 2e-26
 Identities = 76/328 (23%), Positives = 118/328 (35%), Gaps = 87/328 (26%)

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
           P   G+  VG V   G  V   K GD                                  
Sbjct: 21  PLPPGYSSVGRVVEVGSGVTGFKPGD---------------------------------- 46

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
                            +F     +E +V+ AN +V +   + P  A+  +    T    
Sbjct: 47  ----------------RVFCFGPHAERVVVPANLLVPLPDGLPPERAALTALA-ATALNG 89

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
               A+   G  VAV+GLG VGL A   A+  GA +++G+D +  ++E  +A G  D + 
Sbjct: 90  VRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVA 148

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 301
            D                G G D   E +G PS L  AL   +   G+V+++G      +
Sbjct: 149 ADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLKPL 197

Query: 302 PLNVIALACGGRT-LKGTTF-----GGIKTKSDLPTLLDKCKNKEF--------KLHQLL 347
            L       G     K          GI  + D P    + +N E         +L  L+
Sbjct: 198 LL-------GEEFHFKRLPIRSSQVYGI-GRYDRPRRWTEARNLEEALDLLAEGRLEALI 249

Query: 348 THHVKLEEIDKAIQLLKQ--PDCVKVLI 373
           TH V  E+  +A +LL +  P+C+KV++
Sbjct: 250 THRVPFEDAPEAYRLLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  106 bits (266), Expect = 7e-26
 Identities = 105/391 (26%), Positives = 159/391 (40%), Gaps = 69/391 (17%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPA-------PLY- 61
           +AVVC G  +  ++EE+ V  P   E+ VK+    +C  DI C  G P+       P Y 
Sbjct: 2   RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60

Query: 62  --PRVLGHEGVGVVESAGDEVKE--VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI- 116
             P + GHE VG V   G+  +E  VK GD VI   I  C  C  C      +C K+ + 
Sbjct: 61  KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120

Query: 117 ----ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV-KVDPSIDPSDASF- 170
                +NG M                       +EYM      +V KV   I P DA   
Sbjct: 121 GFQNNVNGGM-----------------------AEYMRFPKEAIVHKVPDDIPPEDAILI 157

Query: 171 --LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK 228
             L+C        A   A ++    V + G G +GLG +  AR+    K+I +D    + 
Sbjct: 158 EPLACAL-----HAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERL 212

Query: 229 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 288
              + FG    +NP   P   + E +K +T G G D   E TG PS + + L   +   G
Sbjct: 213 ALARKFGADVVLNP---PEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIR-KLG 268

Query: 289 KVIVIGV-GVDAMVPLNVIA----LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL 343
           + +   V G    V  ++I     L   G  L    +         P  +D   +     
Sbjct: 269 RFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCY---------PIAIDLIASGRLPT 319

Query: 344 HQLLTHHVKLEEIDKAIQLLKQP-DCVKVLI 373
             ++TH   LE+ ++A +L+ +  D +KV++
Sbjct: 320 DGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  105 bits (263), Expect = 2e-25
 Identities = 95/365 (26%), Positives = 154/365 (42%), Gaps = 43/365 (11%)

Query: 18  GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-------LCSEGFPAPLYPRVLGHEGV 70
           G   ++ E+ V  P   EV +K+L  S+C TD+               P    V+GHE  
Sbjct: 8   GYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQ---VVGHEVA 64

Query: 71  GVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM 129
           G V   G  V+ +K GD V + T+I  C +C  C     ++C                  
Sbjct: 65  GEVVGIGPGVEGIKVGDYVSVETHI-VCGKCYACRRGQYHVC------------------ 105

Query: 130 SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE 189
             +  K++ + +   ++EY V+ A  + K   SI P  A+        G       A   
Sbjct: 106 --QNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQE---PLGNAVHTVLAGPI 160

Query: 190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE-PNK 248
            G SV V G G +GL A+  A+  GA  +I  D N ++ E  K  G T  +NP  E   K
Sbjct: 161 SGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVK 220

Query: 249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL 308
            +++L    T G GVD   E +G P  L + L+    G G+V ++G+    +       +
Sbjct: 221 EVADL----TDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKV 275

Query: 309 ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC 368
              G T+ G T  G        T+    ++ +  L  ++TH  K ++ +K  +L++    
Sbjct: 276 IFKGLTIYGIT--GRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT 333

Query: 369 VKVLI 373
            KV++
Sbjct: 334 GKVIL 338

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  103 bits (259), Expect = 6e-25
 Identities = 92/353 (26%), Positives = 143/353 (40%), Gaps = 51/353 (14%)

Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVGVVESAG 77
            PL++ E+ V  P   EV +K+    VC TD+   EG  P P  P + GHE VG VE+ G
Sbjct: 15  NPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVG 74

Query: 78  DEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL 136
             V     GD V +P     C EC  C S   NLC              T   +V G   
Sbjct: 75  PGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLC-DNARF--------TGY-TVDG--- 121

Query: 137 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV 196
                   ++EYMV D  +   +    D  +A+ L C    GY  A K A ++ G  + +
Sbjct: 122 -------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYR-ALKLAGLKPGQRLGL 173

Query: 197 LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI-SELVK 255
            G G     A+  AR  G A++    ++   +E  +  G     + DD P + + + ++ 
Sbjct: 174 YGFGASAHLALQIARYQG-AEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAII- 231

Query: 256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTL 315
                      F    V +L+  AL   K G G+V++ G+ +  +   +   L  G +T+
Sbjct: 232 -----------F--APVGALVPAALRAVKKG-GRVVLAGIHMSDIPAFD-YELLWGEKTI 276

Query: 316 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHH--VKLEEIDKAIQLLKQP 366
           +        T+ D    L      E  +           LEE ++A+Q LK+ 
Sbjct: 277 RSVANL---TRQDGEEFLKLA--AEIPIK---PEVETYPLEEANEALQDLKEG 321

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 96.5 bits (241), Expect = 1e-24
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 21/126 (16%)

Query: 35  EVRVKMLYASVCHTDILCSEGFPAPL-YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTY 93
           EV V++  A +C +D+    G P P+  P +LGHEG G+VE  G  V  +K GD V+   
Sbjct: 3   EVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYP 62

Query: 94  IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA 153
           +  C +C  C     NLC                       K   +     ++EY+V+ A
Sbjct: 63  LIPCGKCAACREGRENLC--------------------PNGKFLGVHLDGGFAEYVVVPA 102

Query: 154 NYVVKV 159
             +V +
Sbjct: 103 RNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 99.7 bits (249), Expect = 1e-23
 Identities = 82/374 (21%), Positives = 133/374 (35%), Gaps = 74/374 (19%)

Query: 18  GEP----LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG----FPAPLYPRVLGHEG 69
           GEP    L++  + + PP   EV V+ML A +  +D++   G     P    P V G+EG
Sbjct: 7   GEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPL--PAVPGNEG 64

Query: 70  VGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM 129
           VGVV   G  V  +  G  V+P                                      
Sbjct: 65  VGVVVEVGSGVSGLLVGQRVLP-------------------------------------- 86

Query: 130 SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE 189
                    +    TW EY+V  A+ ++ V  SI    A+ L     T +    +  K+ 
Sbjct: 87  ---------LGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137

Query: 190 KGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 248
            G  V        VG   +  A++ G  K I + +   + E+ KA G  + I+   E   
Sbjct: 138 PGDWVIQNAANSAVGRMLIQLAKLLG-FKTINVVRRDEQVEELKALGADEVIDSSPE--- 193

Query: 249 SISELVKGITHGMGVDYCFECTG--VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI 306
            +++ VK  T G G     +  G    + L+ +L       G ++  G+     VP    
Sbjct: 194 DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPG----GTLVNYGLLSGEPVPFPRS 249

Query: 307 ALACGGRTLKG---TTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEIDKAIQ 361
                  T++G     +    TK        +         L   +     LE+ ++A+ 
Sbjct: 250 VFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVA 309

Query: 362 LLKQPDCV-KVLIT 374
             +QP    KVL+T
Sbjct: 310 AAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 99.1 bits (248), Expect = 2e-23
 Identities = 85/291 (29%), Positives = 125/291 (42%), Gaps = 60/291 (20%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG---FPAPLYPRV 64
           KAVVC  LG P  L +EE+  EP    EVR+++  A V   D+L  +G      PL P V
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPL-PFV 60

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
            G E  GVVE+ G+ V   K GD V                          +AL G    
Sbjct: 61  PGSEVAGVVEAVGEGVTGFKVGDRV--------------------------VALTGQ--- 91

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                               ++E +V+ A  V  +   +   +A+ L   + T Y A  +
Sbjct: 92  ------------------GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVR 133

Query: 185 EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
            A+++ G +V VLG  G VGL AV  A+  G A++I    +  K    +A G    I+  
Sbjct: 134 RARLQPGETVLVLGAAGGVGLAAVQLAKALG-ARVIAAASSEEKLALARALGADHVIDYR 192

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
           D     + E VK +T G GVD  ++  G   +   +L +   G G+++VIG
Sbjct: 193 DPD---LRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIG 238

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 97.2 bits (243), Expect = 9e-23
 Identities = 86/314 (27%), Positives = 134/314 (42%), Gaps = 51/314 (16%)

Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPL-YPRVLGHEGVGVVESA 76
           + LK+ E  V  P   EV V++   S+ + D+L   G +P P+  P +   +G G V + 
Sbjct: 13  DNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAV 72

Query: 77  GDEVKEVKEGDIVIPTYI-----GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 131
           G+ V   K GD V+PT+      G        T+E     L       G  +D       
Sbjct: 73  GEGVTRFKVGDRVVPTFFPNWLDGPP------TAEDEASAL-------GGPIDGVLA--- 116

Query: 132 RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 191
                          EY+V+    +V+    +   +A+ L C   T + A +    ++ G
Sbjct: 117 ---------------EYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPG 161

Query: 192 SSVAVLGLGTVGLGAVDGARMHGAAKII--GIDKNPWKKEKGKAFGMTDFINPDDEPNKS 249
            +V V G G V L A+  A+  GA  I     D+   K E+ KA G    IN    P+  
Sbjct: 162 DTVLVQGTGGVSLFALQFAKAAGARVIATSSSDE---KLERAKALGADHVINYRTTPD-- 216

Query: 250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIA 307
             E V  +T G GVD+  E  G P  L+++++    G G + +IG   G +A  P+ ++ 
Sbjct: 217 WGEEVLKLTGGRGVDHVVEVGG-PGTLAQSIKAVAPG-GVISLIGFLSGFEA--PVLLLP 272

Query: 308 LACGGRTLKGTTFG 321
           L   G TL+G   G
Sbjct: 273 LLTKGATLRGIAVG 286

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 95.7 bits (238), Expect = 4e-22
 Identities = 95/336 (28%), Positives = 149/336 (44%), Gaps = 33/336 (9%)

Query: 35  EVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPT 92
           +V VK+LY  VCH+D+      +    YP V GHE VG+V   G  VK+ KEGD V +  
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 93  YIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID 152
            +G CK CE+C  ++ N C K     N +  D        G K Y       +S+ +V+D
Sbjct: 99  IVGSCKSCESCDQDLENYCPKMIFTYNSIGHD--------GTKNY-----GGYSDMIVVD 145

Query: 153 ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARM 212
            ++V++   ++     + L C   T Y         E G  + V GLG +G  AV   + 
Sbjct: 146 QHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKA 205

Query: 213 HGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 271
            G  K+  I  +  K+++     G   F+   D P K     +K     M  DY  +   
Sbjct: 206 FG-LKVTVISSSSNKEDEAINRLGADSFLVSTD-PEK-----MKAAIGTM--DYIIDTVS 256

Query: 272 VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPT 331
               L   L   KV  GK+I +G+  +  + L +  L  G + + G+  GGIK   +   
Sbjct: 257 AVHALGPLLGLLKV-NGKLITLGLP-EKPLELPIFPLVLGRKLVGGSDIGGIKETQE--- 311

Query: 332 LLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 367
           +LD C          L   ++++EI+ A++ L + D
Sbjct: 312 MLDFCAKHNITADIEL---IRMDEINTAMERLAKSD 344

Length = 360

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 94.1 bits (235), Expect = 1e-21
 Identities = 93/392 (23%), Positives = 151/392 (38%), Gaps = 87/392 (22%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-------LCSEGFPAPLYP 62
           KA+V       L + ++ V  P   +V +K+   ++C TD+          +  P P+  
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPM-- 59

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGE----CKECENCTSEMTNLCLKYPIAL 118
            V+GHE VG V   G EV   K GD V     GE    C  C NC +   +LC       
Sbjct: 60  -VVGHEFVGEVVEVGSEVTGFKVGDRVS----GEGHIVCGHCRNCRAGRRHLC----RNT 110

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
            G+ ++                    ++EY+VI A  V K+   I    A+         
Sbjct: 111 KGVGVNRPG----------------AFAEYLVIPAFNVWKIPDDIPDDLAAIFD-----P 149

Query: 179 YGAAWKEAKVEK-------GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231
           +G A     V         G  V + G G +G+ A   A+  GA  ++  D N ++ E  
Sbjct: 150 FGNA-----VHTALSFDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELA 204

Query: 232 KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI 291
           +  G T  +N   E    + +++  +    G D   E +G PS   + L+    G G++ 
Sbjct: 205 RKMGATRAVNVAKE---DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIA 260

Query: 292 VIGVGVDAM-VPLN-VIALACGGRTLKGTTFGGI----------KTKSDLPTLLDKCKNK 339
           ++G+    M +  N VI         KG T  GI          K  + L + LD     
Sbjct: 261 MLGIPPGDMAIDWNKVI--------FKGLTIKGIYGREMFETWYKMSALLQSGLD----- 307

Query: 340 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 371
              L  ++TH   +++  K  + ++     KV
Sbjct: 308 ---LSPIITHRFPIDDFQKGFEAMRSGQSGKV 336

Length = 341

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 91.0 bits (226), Expect = 7e-21
 Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 44/270 (16%)

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGE---------CKECENCTSEMTNLCLKY 114
           VLGHE VG V +         +G    P  +G+         C  C  C   +   C   
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGV---PLRLGQRVVWSVTVPCGRCFRCRRGLPQKCD-- 55

Query: 115 PIALNGLMLDSTSRMSVRGQKLYHIFSCSTW------SEYMVIDANY-VVKVDPSIDPSD 167
                          S+R  K  H    S W      +E+  + A   +V V   +  + 
Sbjct: 56  ---------------SLR--KYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAV 98

Query: 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 227
           A+   C   T   AA + A   KG  V V+G G +GL A   A   GAA+++  D +P +
Sbjct: 99  AAPAGCATAT-VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDR 157

Query: 228 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 287
           +E   +FG T    P+       +E   G+ +G GVD   E +G  + +   LE+  VG 
Sbjct: 158 RELALSFGATALAEPEVL-----AERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGG 212

Query: 288 GKVIVIGVGVDAMVPLNVIALACGGRTLKG 317
             V+   V     V L+   +     T++G
Sbjct: 213 TAVLAGSVFPGGPVALDPEQVVRRWLTIRG 242

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 91.9 bits (228), Expect = 8e-21
 Identities = 78/297 (26%), Positives = 124/297 (41%), Gaps = 40/297 (13%)

Query: 16  GLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFP---APLYPRVLGHEGVG 71
             G+P+    +++    + +V VK+    VCHTD+     G     A   P  LGHE  G
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHAL--PLALGHEISG 63

Query: 72  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 131
            V  AG          +++P  I  C ECE C +    +C    +  N +          
Sbjct: 64  RVIQAGAGAASWIGKAVIVPAVI-PCGECELCKTGRGTICRAQKMPGNDMQ--------- 113

Query: 132 RGQKLYHIFSCSTWSEYMVIDANYVVKVDPS------IDPSDASFLSCGFTTGYGAAWKE 185
                        ++ ++V+ A  +  VD +      +     S ++   TT Y AA + 
Sbjct: 114 -----------GGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ- 161

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           A ++KG  V V+G G VG   V  A+  GAA ++ ID +P K E  K FG    +NP D+
Sbjct: 162 AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDK 220

Query: 246 PNKSISELVKGITHGMGVDY----CFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
             + + +L+K      G+       FEC+G       AL     G G ++V+G  + 
Sbjct: 221 SAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA 276

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 91.0 bits (226), Expect = 2e-20
 Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 35/277 (12%)

Query: 10  KAVVCWGLGEPLKVEEI---QVEPPKSTEVRVKMLYASVCHTDI--LCSEGFPAPLYPRV 64
           K+VV    G  ++V E    +++     +V VK+  + +C +DI  +   G  A  YP  
Sbjct: 2   KSVVNDTDGI-VRVAESPIPEIKHQD--DVLVKVASSGLCGSDIPRIFKNG--AHYYPIT 56

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           LGHE  G VE+ G  V ++  GD V    +  C  C  C     +LC KY          
Sbjct: 57  LGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFI------- 109

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
             SR                 +EY+V+    +  +   +   D +F+    T G   A+ 
Sbjct: 110 -GSR------------RDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGL-HAFH 154

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
            A+  +G +V ++G GT+GL A+  A   GA  +  ID N  K    K+ G     N  +
Sbjct: 155 LAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 281
                I  +++ +     +    E  GVP  +  A+E
Sbjct: 215 MSAPQIQSVLRELRFDQLI---LETAGVPQTVELAIE 248

Length = 347

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 89.6 bits (223), Expect = 6e-20
 Identities = 79/287 (27%), Positives = 106/287 (36%), Gaps = 50/287 (17%)

Query: 23  VEEIQVEPPKSTEVRVKMLYASVCHTD---ILCSEGFPAPLYPR-VLGHEGVGVVESAGD 78
           V +I    P   EV V+ L   VC TD   +    G   P     VLGHE +GVVE  GD
Sbjct: 15  VVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGD 74

Query: 79  EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 138
               +  GD+V+PT      +C NC     + C              T   + RG K  H
Sbjct: 75  G-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFC-------------ETGEYTERGIKGLH 120

Query: 139 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFL----SC---GFTTGYGAAWKEAKVEKG 191
            F      EY V D  Y+VKV PS+  +D   L    S           A  K       
Sbjct: 121 GFM----REYFVDDPEYLVKVPPSL--ADVGVLLEPLSVVEKAIEQAE-AVQKRLPTWNP 173

Query: 192 SSVAVLGLGTVGL-----GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246
               VLG G +GL       + G  ++   +    D    K +  +  G T ++N    P
Sbjct: 174 RRALVLGAGPIGLLAALLLRLRGFEVYVLNR---RDPPDPKADIVEELGAT-YVNSSKTP 229

Query: 247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293
                  V  +      D   E TGVP L  EAL    +    V+++
Sbjct: 230 -------VAEVKLVGEFDLIIEATGVPPLAFEALP--ALAPNGVVIL 267

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 86.9 bits (216), Expect = 4e-19
 Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 57/321 (17%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG--FPAPLYPRVL 65
           +AV     G P  L++EE+ V  P + EV +++    +   D +   G     P  P  L
Sbjct: 2   RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARL 61

Query: 66  GHEGVGVVESAGDEVKEVKEGD--IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           G+E  GVVE+ G  V     GD   VIP                                
Sbjct: 62  GYEAAGVVEAVGAGVTGFAVGDRVSVIPAAD----------------------------- 92

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
                +   G          T++EY ++ A  VVK+   +   +A+ L   + T YGA  
Sbjct: 93  -----LGQYG----------TYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALV 137

Query: 184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           + A +  G SV +     +VGL A+  A   G A +I   +   K++   A G    I  
Sbjct: 138 ELAGLRPGDSVLITAASSSVGLAAIQIANAAG-ATVIATTRTSEKRDALLALGAAHVIVT 196

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
           D+E    +   V  IT G GVD  F+  G P   ++  +    G G ++V G       P
Sbjct: 197 DEED---LVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSGEPTP 251

Query: 303 LNVIALACGGRTLKGTTFGGI 323
             + A      T +G +   I
Sbjct: 252 FPLKAALKKSLTFRGYSLDEI 272

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 87.2 bits (216), Expect = 4e-19
 Identities = 88/337 (26%), Positives = 144/337 (42%), Gaps = 35/337 (10%)

Query: 35  EVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPT 92
           +V +K++Y  +CHTD+   +       YP V GHE VG V   G +V +   GDIV +  
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95

Query: 93  YIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID 152
            +G C EC  C S++   C K   + N +  D        G+     F+ +     MV+D
Sbjct: 96  IVGCCGECSPCKSDLEQYCNKRIWSYNDVYTD--------GKPTQGGFASA-----MVVD 142

Query: 153 ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARM 212
             +VVK+   + P  A+ L C   T Y         + G    +LGLG VG   V  A+ 
Sbjct: 143 QKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKA 202

Query: 213 HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV 272
            G    +    +  ++E  +  G  D++   D     + E    +      DY  +   V
Sbjct: 203 MGHHVTVISSSDKKREEALEHLGADDYLVSSDA--AEMQEAADSL------DYIIDTVPV 254

Query: 273 PSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA--LACGGRTLKGTTFGGIKTKSDLP 330
              L   L   K+  GK+I++GV      PL  +   L  G + + G+  G +K   +  
Sbjct: 255 FHPLEPYLSLLKL-DGKLILMGV---INTPLQFVTPMLMLGRKVITGSFIGSMK---ETE 307

Query: 331 TLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 367
            +L+ CK K       +   VK++ ++ A + L++ D
Sbjct: 308 EMLEFCKEKGL---TSMIEVVKMDYVNTAFERLEKND 341

Length = 357

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 78/382 (20%), Positives = 138/382 (36%), Gaps = 61/382 (15%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI----LCSEGFPAPLYPR-- 63
           +A V      PL V ++    P   +V VK+L   +C +D+               P   
Sbjct: 2   RAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLM 59

Query: 64  ------VLGHEGVG-VVESAGDEVKEVKEGDIV--IPTYIGECKECENCTSEMTNLCLKY 114
                 VLGHE  G VV+      +++K G  V  +P  +     C              
Sbjct: 60  DLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLP-LLL----CGQG----------- 103

Query: 115 PIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCG 174
                                     +   ++EYM++    +++V   +   DA+ L+  
Sbjct: 104 ----------------ASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEP 146

Query: 175 FTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF 234
              G  A  + A++  G    V+G G +GL  +   +  G   I+  D +P ++    A 
Sbjct: 147 LAVGLHAVRR-ARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM 205

Query: 235 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
           G    ++P  +   +          G      FEC G P L+ + +E    G G+++V+G
Sbjct: 206 GADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVG 264

Query: 295 VGVDAMVPLNVIALACGGRTLKGTT--FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK 352
           V    M   N+          K  T  F    T  +    LD     +  +  ++T  V 
Sbjct: 265 V---CMESDNIEPALA---IRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVG 318

Query: 353 LEEIDKAIQLLKQPDC-VKVLI 373
           L+ +  A + L+ P+   K+L+
Sbjct: 319 LDGVPDAFEALRDPEHHCKILV 340

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 84.1 bits (209), Expect = 3e-18
 Identities = 61/291 (20%), Positives = 107/291 (36%), Gaps = 62/291 (21%)

Query: 10  KAVVC--WGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY----PR 63
           KAV    +G  E L++ ++    P   EV VK+  A V   D+   EG     +    P 
Sbjct: 2   KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           + GH+  GVV + G  V   K GD V                                  
Sbjct: 62  IPGHDVAGVVVAVGPGVTGFKVGDEVF--------------------------------- 88

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
              +  +  G           ++EY+V+ A+ +     ++   +A+ L     T + A +
Sbjct: 89  -GMTPFTRGG----------AYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALF 137

Query: 184 KEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           +   ++ G +V + G  G VG  AV  A+  G A++I         +  ++ G  + I+ 
Sbjct: 138 ELGGLKAGQTVLIHGAAGGVGSFAVQLAKARG-ARVIATASAA-NADFLRSLGADEVIDY 195

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293
                       +      GVD   +  G  + L+ +L   K G G+++ I
Sbjct: 196 TK-------GDFERAAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSI 237

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 84.0 bits (208), Expect = 4e-18
 Identities = 87/358 (24%), Positives = 143/358 (39%), Gaps = 37/358 (10%)

Query: 21  LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDE 79
           L +EE  +  P + EVRVK+  A +C +D     G  P   YPRV+GHE  GV+++ G+ 
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71

Query: 80  VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 139
           V   + G+ V    +  C  C  C+    N+C               + + V G     +
Sbjct: 72  VDAARIGERVAVDPVISCGHCYPCSIGKPNVC---------------TSLVVLG-----V 111

Query: 140 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL 199
                +SEY V+ A    ++  +I    A  +   FT             +     + G 
Sbjct: 112 HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVE-PFTIAANVT-GRTGPTEQDVALIYGA 169

Query: 200 GTVGLGAVDG-ARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT 258
           G VGL  V     ++    +I  D+   +    K  G    IN   EP     E  KGI 
Sbjct: 170 GPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALE-EKGIK 228

Query: 259 HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT 318
             + +D        PS+L EA+ T      +++++G   +   P  ++     G+ L  +
Sbjct: 229 PTLIID----AACHPSILEEAV-TLASPAARIVLMGFSSE---PSEIVQQGITGKEL--S 278

Query: 319 TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK--QPDCVKVLIT 374
            F      +  P ++D          +L+TH    + +  AI+L +  Q  C KVL+T
Sbjct: 279 IFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLT 336

Length = 339

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 83.3 bits (207), Expect = 5e-18
 Identities = 75/258 (29%), Positives = 97/258 (37%), Gaps = 60/258 (23%)

Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVGVVESAG 77
           E L+ E++ V  P   EV V+     V   D     G +P PL P VLG EG GVVE+ G
Sbjct: 12  EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL-PFVLGVEGAGVVEAVG 70

Query: 78  DEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
             V   K GD V   Y                                       G    
Sbjct: 71  PGVTGFKVGDRV--AY-----------------------------------AGPPG---- 89

Query: 138 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDA--SFLSCGFTTGYGAAWKEA-KVEKGSSV 194
                  ++EY V+ A+ +VK+   I    A    L  G T  Y    +E   V+ G +V
Sbjct: 90  ------AYAEYRVVPASRLVKLPDGISDETAAALLLQ-GLTAHYLL--RETYPVKPGDTV 140

Query: 195 AVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISEL 253
            V    G VGL     A+  G A +IG   +  K E  +A G    IN  DE      E 
Sbjct: 141 LVHAAAGGVGLLLTQWAKALG-ATVIGTVSSEEKAELARAAGADHVINYRDE---DFVER 196

Query: 254 VKGITHGMGVDYCFECTG 271
           V+ IT G GVD  ++  G
Sbjct: 197 VREITGGRGVDVVYDGVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 83.5 bits (206), Expect = 9e-18
 Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 38/339 (11%)

Query: 35  EVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPT 92
           +V VK+L+  VCH+D+      +    YP + GHE VG+    G  V + KEGD V +  
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92

Query: 93  YIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID 152
            IG C+ CE+C  ++ N C K     N    D T     R Q  Y        S+ +V+D
Sbjct: 93  IIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT-----RNQGGY--------SDVIVVD 139

Query: 153 ANYVVKVDPSIDPSD--ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGA 210
             +V+ + P   PSD  A  L  G T      +     E G  + V GLG +G  AV   
Sbjct: 140 HRFVLSI-PDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIG 198

Query: 211 RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT 270
           +  G    +    +  ++E     G   F+   D      S+ +K     M  D+  +  
Sbjct: 199 KAFGLRVTVISRSSEKEREAIDRLGADSFLVTTD------SQKMKEAVGTM--DFIIDTV 250

Query: 271 GVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLP 330
                L       KV  GK++ +G+  +  + L +  L  G + + G+  GG+K   +  
Sbjct: 251 SAEHALLPLFSLLKV-SGKLVALGLP-EKPLDLPIFPLVLGRKMVGGSQIGGMKETQE-- 306

Query: 331 TLLDKCKNKEFKLHQLLT--HHVKLEEIDKAIQLLKQPD 367
            +L+ C       H++++    +K+ +I+ A+  L + D
Sbjct: 307 -MLEFCAK-----HKIVSDIELIKMSDINSAMDRLAKSD 339

Length = 375

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 79.2 bits (196), Expect = 1e-16
 Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 57/269 (21%)

Query: 9   CKAVVCWGLGEPLKVEEIQVE--PPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVL 65
            KA V    G  L++   ++E   P + EV VK+  A +   D  + + G PA  YP V 
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVP 60

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           G +G GVV + G +V   K GD V                                    
Sbjct: 61  GVDGAGVVVAVGAKVTGWKVGDRV------------------------------------ 84

Query: 126 TSRMSVRGQKLYH--IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
                      YH  +    +++EY V+DA  V+ +  S+   +A+ L C   T Y A +
Sbjct: 85  ----------AYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALF 134

Query: 184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           K+ ++E G ++ + G  G VG  AV  A+  G   I    K  +  E  K+ G    I  
Sbjct: 135 KKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKRNF--EYVKSLGADHVI-- 190

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTG 271
            D  ++ + E +K IT G GVD   +  G
Sbjct: 191 -DYNDEDVCERIKEITGGRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 52/181 (28%), Positives = 68/181 (37%), Gaps = 56/181 (30%)

Query: 9   CKAVVCWGLGEP---LKVEEIQVEPPKST-EVRVKMLYASVCHTDILCSEG---FPAPLY 61
            KA+V    GEP   L++E  ++ PP    EV VKML A +   DI   +G      P  
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 62  ---PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL 118
              P V G+EGVG V   G  VK +K GD VIP   G                       
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPG----------------------- 97

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
                                    TW  + V+ A+ ++KV   +DP  A+ LS    T 
Sbjct: 98  -----------------------LGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTA 134

Query: 179 Y 179
           Y
Sbjct: 135 Y 135

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 75.2 bits (185), Expect = 4e-15
 Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 37/300 (12%)

Query: 15  WGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY----PRVLGHEG 69
           W +G   LK++  ++ P    +VRV+M    +C +D+   +      +    P V+GHE 
Sbjct: 22  WLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHEC 81

Query: 70  VGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM 129
            G++E  G EVK +  GD V       C  C  C     NLC                 M
Sbjct: 82  AGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC---------------PEM 126

Query: 130 SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAWKEA 186
                   H     + +  +V  A+   K+  ++   + +    LS G       A + A
Sbjct: 127 KFFATPPVH----GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGV-----HACRRA 177

Query: 187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 246
            +   ++V V+G G +GL  +  AR  GA +I+ +D +  +    K  G  + +      
Sbjct: 178 NIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNI 237

Query: 247 NKSISELVKGITHGMG--VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM-VPL 303
               SE+ + I   MG  +D  F+C G    +S ALE T+ G GKV ++G+G + M VPL
Sbjct: 238 EDVESEVEE-IQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPL 295

Length = 364

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 75.0 bits (185), Expect = 5e-15
 Identities = 56/219 (25%), Positives = 82/219 (37%), Gaps = 59/219 (26%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-----PAPLYP 62
           + VV    G P  LKV E  +  P + EV VK+  + V   D+    G      P P  P
Sbjct: 2   REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTP 61

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
              G++ VG V++ G  V   + GD V                           AL    
Sbjct: 62  ---GYDLVGRVDALGSGVTGFEVGDRVA--------------------------ALT--- 89

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
                     G            +EY+ +DA Y+V V   +D ++A  L   + T Y   
Sbjct: 90  --------RVG----------GNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQML 131

Query: 183 WKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG 220
            + AKV  G  V + G  G VG   ++ A + G A++ G
Sbjct: 132 HRAAKVLTGQRVLIHGASGGVGQALLELALLAG-AEVYG 169

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 8e-15
 Identities = 77/292 (26%), Positives = 106/292 (36%), Gaps = 57/292 (19%)

Query: 8   TCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG--FPAPLYPR 63
             +AV   G G    LK+ E     PK  +V +K+  A V   D L  +G   P P    
Sbjct: 1   MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE 60

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           +LG E  G VE  G +VK  KEGD                                    
Sbjct: 61  ILGLEVAGYVEDVGSDVKRFKEGD------------------------------------ 84

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
                      ++  +     ++EY V    +V+ +       +A+ +   F T +    
Sbjct: 85  -----------RVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLK 133

Query: 184 KEAKVEKGSSVAV-LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
           K   V+KG SV +  G   VG  A   A  +GAA II    +  K +  K       I  
Sbjct: 134 KHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITT-SSEEKVDFCKKLAAIILIRY 192

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
            DE   +    VK +T   GV+   +C G  S LSE  E   V  GK IV G
Sbjct: 193 PDEEGFAPK--VKKLTGEKGVNLVLDCVG-GSYLSETAEVLAV-DGKWIVYG 240

Length = 334

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 67/288 (23%), Positives = 111/288 (38%), Gaps = 52/288 (18%)

Query: 21  LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGH-EGVGVVESAGD 78
           L++ ++ V  P   EV V++  + V   D     G +P       +   +G GVVE+ G+
Sbjct: 15  LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGE 74

Query: 79  EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 138
            V  +K GD V                                 L +      +G     
Sbjct: 75  GVDGLKVGDRV--------------------------------WLTNLGWGRRQG----- 97

Query: 139 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG 198
                T +EY+V+ A+ +V +   +     + L     T Y A +  A  + G +V V G
Sbjct: 98  -----TAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHG 152

Query: 199 -LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI 257
             G VG  AV  AR  G A++I    +    E  +  G     N   E    +++ +   
Sbjct: 153 GSGAVGHAAVQLARWAG-ARVIATASSAEGAELVRQAGADAVFNYRAE---DLADRILAA 208

Query: 258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG-VGVDAMVPLN 304
           T G GVD   E     + L++ L+    G G+++V G  G+   +P+N
Sbjct: 209 TAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGGLRGTIPIN 254

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 71.0 bits (174), Expect = 2e-13
 Identities = 90/309 (29%), Positives = 129/309 (41%), Gaps = 48/309 (15%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTE---------VRVKMLYASVCHTDILCSEGFPAPL 60
           + VV  G G   KVE   ++ PK            V +K++  ++C +D     G     
Sbjct: 4   RGVVYLGPG---KVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTAP 60

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
              VLGHE  G V   G +V+ +K GDIV   +   C  C NC    T +CL    A   
Sbjct: 61  TGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPA--- 117

Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTW----SEY-MVIDANYVVKVDPSIDPS-----DASF 170
                      R    Y       W    SEY MV  A++ +   P  D +     D + 
Sbjct: 118 -----------RAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTM 166

Query: 171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 230
           LS  F TGY  A   A V  GS+V + G G VGL A   A++ GAA +I  D NP +  +
Sbjct: 167 LSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ 225

Query: 231 GKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYC-FECTG--------VPS-LLSEA 279
            ++FG  T  ++ D    + I +++        VD   FE  G         P+ +L+  
Sbjct: 226 ARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSL 285

Query: 280 LETTKVGKG 288
           +E T+VG  
Sbjct: 286 MEVTRVGGA 294

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 68/280 (24%), Positives = 110/280 (39%), Gaps = 50/280 (17%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEG 69
           KA+V  G G  L+VE++    P   E  V++L A +C+TD+   +G+    +P V GHE 
Sbjct: 2   KALVLDG-GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP--FPGVPGHEF 58

Query: 70  VGVVESAGDE--VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
           VG+VE   +   V +   G+I I      C  CE C   +   C                
Sbjct: 59  VGIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHCP--------------- 98

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAWK 184
             +V G           ++EY+ +    +  V   +    A F   L+           +
Sbjct: 99  NRTVLGIVDRD----GAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAAL-----EILE 149

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
           +  +  G  VAVLG G +GL       + G   ++ + ++  K    +  G  + + PD+
Sbjct: 150 QVPITPGDKVAVLGDGKLGLLIAQVLALTG-PDVVLVGRHSEKLALARRLG-VETVLPDE 207

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 284
             ++           G G D   E TG PS L  AL   +
Sbjct: 208 AESE-----------GGGFDVVVEATGSPSGLELALRLVR 236

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.1 bits (162), Expect = 4e-12
 Identities = 81/365 (22%), Positives = 125/365 (34%), Gaps = 68/365 (18%)

Query: 12  VVCWGLGEP----LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL----YPR 63
           VV    G P    L   E+ +  PK  EV VK+  ASV   D     G P  L    +P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           + G +  G V + G  V   K GD V                                  
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVF--------------------------------- 87

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
               R+  +G            +EY+V   + + K    +   +A+ L     T   A  
Sbjct: 88  ---GRLPPKGGG--------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALR 136

Query: 184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
              KV+ G  V + G  G VG  AV  A+  G A + G+  +    E  ++ G  + I+ 
Sbjct: 137 DAGKVKPGQRVLINGASGGVGTFAVQIAKALG-AHVTGVC-STRNAELVRSLGADEVIDY 194

Query: 243 DDEPNKSISELVKGITHGMGV-DYCFECTG-VPSLLSEALETTKVGKGKVIVIGVGVDAM 300
             E           +T G    D  F+  G  P  L  A    K G G+ + +G G   +
Sbjct: 195 TTED-------FVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGL 246

Query: 301 VPLNVIALACGGRTLKG-TTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
           + + ++     G   +    F       DL  L +  +  + K    +     LE+  +A
Sbjct: 247 LLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV--IDSVYPLEDAPEA 304

Query: 360 IQLLK 364
            + LK
Sbjct: 305 YRRLK 309

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 85/375 (22%), Positives = 130/375 (34%), Gaps = 85/375 (22%)

Query: 18  GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAG 77
           G  L V ++ V  P   EV VK+   ++   D    +    P YP +LG +  G V   G
Sbjct: 11  GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVG 70

Query: 78  DEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
             V   K GD V                              G +          G    
Sbjct: 71  SGVTRFKVGDRVA-----------------------------GFVHGGNPNDPRNG---- 97

Query: 138 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT---------GYGAAW-KEAK 187
                  + EY+V DA+   K+  +I   +A+ L  G  T         G      K + 
Sbjct: 98  ------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSP 151

Query: 188 VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGI--DKNPWKKEKGKAFGMTDFIN--- 241
             KG  V + G  + VG  A+  A++ G  K+I     KN    +  K+ G     +   
Sbjct: 152 ASKGKPVLIWGGSSSVGTLAIQLAKLAG-YKVITTASPKN---FDLVKSLGADAVFDYHD 207

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPS---LLSEALETTKVGKGKVIVIGVGVD 298
           PD        E ++  T G  + Y  +C   P    L +EAL  +  GK  V ++ V  +
Sbjct: 208 PDVV------EDIRAATGG-KLRYALDCISTPESAQLCAEALGRSGGGKL-VSLLPVPEE 259

Query: 299 AMVPLNVIALACGGRTLKGTTFGGIKTKSD--------LPTLLDKCKNKEFKLHQLLTHH 350
                 V         L  T FG I    +        LP LL++    + K H +    
Sbjct: 260 TEPRKGVKV----KFVLGYTVFGEIPEDREFGEVFWKYLPELLEE---GKLKPHPVRVVE 312

Query: 351 VKLEEIDKAIQLLKQ 365
             LE + + + LL++
Sbjct: 313 GGLEGVQEGLDLLRK 327

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 6e-11
 Identities = 62/257 (24%), Positives = 100/257 (38%), Gaps = 27/257 (10%)

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
           P VLGHE +G +  +      +KEG  V       C  C+ C S   N C          
Sbjct: 60  PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQC---------- 107

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
                + M   G  +Y       ++ Y V+D    +      D    +F        + A
Sbjct: 108 -----TTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAIHAA 162

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
              +A   +G  V V G+G +G   V   +  GAA+I+  D +P      +  G    +N
Sbjct: 163 --HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN 220

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 301
           P ++      +L          D  FE +G PS ++  LE T+  KG ++ +G+G  A  
Sbjct: 221 PQND------DLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTR-AKGVMVQVGMG-GAPP 272

Query: 302 PLNVIALACGGRTLKGT 318
              ++ L     +LKG+
Sbjct: 273 EFPMMTLIVKEISLKGS 289

Length = 343

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 62.2 bits (152), Expect = 9e-11
 Identities = 70/291 (24%), Positives = 111/291 (38%), Gaps = 59/291 (20%)

Query: 10  KAVVCWGLG--EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRVL 65
           +AVV  G G  + LKVE+  +  P S EVRV++    +   D++  +G    AP  P V 
Sbjct: 1   RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVP 60

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           G E  G VE+ G+ VK+ K GD V                          + L       
Sbjct: 61  GFECAGTVEAVGEGVKDFKVGDRV--------------------------MGLT------ 88

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
                              ++E + + A+ V  +   +   +A+     + T Y A ++ 
Sbjct: 89  ---------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFEL 133

Query: 186 AKVEKGSSVAVL-GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
             +  G SV V    G VGL A    +      ++G   +  K E  K  G+T  I   D
Sbjct: 134 GNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEALKENGVTHVI---D 189

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 295
              +   E VK I+   GVD   +  G      ++ +  K   G+++V G 
Sbjct: 190 YRTQDYVEEVKKIS-PEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGA 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 53/234 (22%), Positives = 83/234 (35%), Gaps = 58/234 (24%)

Query: 35  EVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYI 94
           EV V++  A +   D+L + G   P     LG E  G+V   G  V  +K GD V+    
Sbjct: 2   EVEVEVKAAGLNFRDVLVALG-LLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM---- 56

Query: 95  GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN 154
                                                         +   ++ ++ +DA 
Sbjct: 57  --------------------------------------------GLAPGAFATHVRVDAR 72

Query: 155 YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-GLGTVGLGAVDGARMH 213
            VVK+  S+   +A+ L   + T Y A    A+++KG SV +    G VG  A+  A+  
Sbjct: 73  LVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHL 132

Query: 214 GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI---THGMGVD 264
           G A++     +  K+E    F        D   +        GI   T G GVD
Sbjct: 133 G-AEVFATVGSEEKRE----FLRELGGPVDHIFSSRDLSFADGILRATGGRGVD 181

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 64/241 (26%), Positives = 92/241 (38%), Gaps = 53/241 (21%)

Query: 27  QVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVLGHEGVGVVESAGDEVKEVK 84
           +V PP   EVR+++   S+   D+LC  G +P  P YP   G E  GVV + G  V  + 
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60

Query: 85  EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCST 144
            GD VI    GE                                 S+ G           
Sbjct: 61  VGDEVIAG-TGE---------------------------------SMGGH---------- 76

Query: 145 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV-LGLGTVG 203
            +  + +  + VV+   S+   +A  L   F T    A+  A + KG  + +    G  G
Sbjct: 77  -ATLVTVPEDQVVRKPASLSFEEACALPVVFLTVI-DAFARAGLAKGEHILIQTATGGTG 134

Query: 204 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 263
           L AV  AR+ G A+I     +  K E  K  G+   IN  +E      E +  +T G GV
Sbjct: 135 LMAVQLARLKG-AEIYATASSDDKLEYLKQLGVPHVINYVEE---DFEEEIMRLTGGRGV 190

Query: 264 D 264
           D
Sbjct: 191 D 191

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.8 bits (138), Expect = 5e-09
 Identities = 67/292 (22%), Positives = 104/292 (35%), Gaps = 61/292 (20%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTD--ILCSEGFPAPLYPRVL 65
           KA+V    G P   ++ E+    P   +V V++  + V   D  I        P  P +L
Sbjct: 2   KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAIL 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           G +  GVVE+ G+ V   + GD V     G                      L G     
Sbjct: 62  GCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLG-------------------GLQG----- 97

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
                             + +EY V+DA  +     ++   +A+ L     T +      
Sbjct: 98  ------------------SLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDR 139

Query: 186 AKVEKGSSVAVLGLGTVGLG--AVDGARMHGA--AKIIGIDKNPWKKEKGKAFGMTDFIN 241
           A V+ G +V + G G  G+G  AV  A+  GA        +K  + +  G      D I 
Sbjct: 140 AAVQAGQTVLIHG-GAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLG-----ADPII 193

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293
              E   ++ E V   T G G D  F+  G    L  + E   +  G+V+ I
Sbjct: 194 YYRE---TVVEYVAEHTGGRGFDVVFDTVG-GETLDASFEAVALY-GRVVSI 240

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 36/161 (22%), Positives = 58/161 (36%), Gaps = 54/161 (33%)

Query: 10  KAVVCWGLGEPLKVEEIQVEP---PKSTEVRVKMLYASVCHTDILC---SEGFPAPLYPR 63
           +A V    G+P  V EI   P   P + EV V+   + + + D+     + G+   L P 
Sbjct: 2   RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPEL-PA 60

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           + G E VGVV++ G+ VK ++ G                                     
Sbjct: 61  IGGSEAVGVVDAVGEGVKGLQVG------------------------------------- 83

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164
               R++V            TW+EY V  A+ +V +   I 
Sbjct: 84  ---QRVAVAPVH-------GTWAEYFVAPADGLVPLPDGIS 114

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 65/291 (22%), Positives = 116/291 (39%), Gaps = 58/291 (19%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL-YPRVLG 66
           KA+V    G P  LK+ EI +  PK   V +++    +  ++I   +G    + +PRVLG
Sbjct: 2   KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
            E VG VE A         G  V                              G M  + 
Sbjct: 62  IEAVGEVEEAPGG--TFTPGQRV--------------------------ATAMGGMGRT- 92

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 186
                        F  S ++EY ++    V  +D  +  ++ + L   + T +G+ ++  
Sbjct: 93  -------------FDGS-YAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSL 138

Query: 187 KVEKGSSVAVLGLGT--VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
            ++ G ++ + G GT  VGL A+  A+  G A +    ++P +    K  G  + +   D
Sbjct: 139 GLQPGDTLLIRG-GTSSVGLAALKLAKALG-ATVTATTRSPERAALLKELGADEVVI--D 194

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 295
           +   +I+E ++      G D   E  G  + L ++L   + G G V + G+
Sbjct: 195 DG--AIAEQLR--AAPGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 50.1 bits (121), Expect = 7e-07
 Identities = 56/235 (23%), Positives = 85/235 (36%), Gaps = 67/235 (28%)

Query: 38  VKMLYASVCHTDILCSEGFPAPLYPR--VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIG 95
           +++  A +   D+L + G    LYP   VLG E  GVV   G  V  +  GD V+     
Sbjct: 1   IEVRAAGLNFRDVLIALG----LYPGEAVLGGECAGVVTRVGPGVTGLAVGDRVM----- 51

Query: 96  ECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY 155
                                   GL   +                   ++  +V DA  
Sbjct: 52  ------------------------GLAPGA-------------------FATRVVTDARL 68

Query: 156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL---GLGTVGLGAVDGARM 212
           VV +       +A+ +   F T Y A    A++  G S  VL     G VG  A+  AR 
Sbjct: 69  VVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGES--VLIHAAAGGVGQAAIQLARH 126

Query: 213 HGAAKIIGIDKNPWKKEKGKAFGMTDFINPD---DEPNKSISELVKGITHGMGVD 264
            G A++     +P K++  +A G    I  D      + S ++ +   T G GVD
Sbjct: 127 LG-AEVFATAGSPEKRDFLRALG----IPDDHIFSSRDLSFADEILRATGGRGVD 176

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 74/371 (19%), Positives = 146/371 (39%), Gaps = 73/371 (19%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCH-TDILCSEG----FPAPLYPRV 64
           +A+V  G    +++ E+ + PP   ++ V++ Y+ +   T+ L   G    FP   YP V
Sbjct: 3   QAIVLSGP-NQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLV 61

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
            G+E VG V  AG +    + GD V +P          NC  +           + GL  
Sbjct: 62  PGYESVGRVVEAGPDTGF-RPGDRVFVPG--------SNCYED-----------VRGLFG 101

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
            ++ R                    +V  A+ V ++DP++ P   + L+   T  +  A 
Sbjct: 102 GASKR--------------------LVTPASRVCRLDPALGP-QGALLALAATARHAVAG 140

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
            E KV       ++G GT+G       +  G +     + NP +++    +   + ++P+
Sbjct: 141 AEVKVLP---DLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPE 194

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 303
            +P +    +             ++ +G PSL+   +     G G++++ G   + +   
Sbjct: 195 KDPRRDYRAI-------------YDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFD 240

Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA-IQL 362
            V A     R      +       DL  + +  ++    L  L+TH     +  +A +  
Sbjct: 241 FVPAFMKEARLRIAAEW----QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTA 296

Query: 363 LKQPDCVKVLI 373
              PDC+K+++
Sbjct: 297 FSDPDCLKMIL 307

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 49.9 bits (119), Expect = 8e-07
 Identities = 53/201 (26%), Positives = 74/201 (36%), Gaps = 28/201 (13%)

Query: 20  PLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVL-GHEGVGVVESAGD 78
           PL+  E  V  P   E+ V++    VC TD+  SEG      PRV  GHE VG V   G 
Sbjct: 14  PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGA 73

Query: 79  EVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
           +      GD V I      C  C  C     NLC               SR +       
Sbjct: 74  DAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLC-------------PASRYTGWDTD-- 118

Query: 138 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL 197
                  ++EY  + A +  ++    D  + + L C    GY A  + A +  G  + + 
Sbjct: 119 -----GGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLY 172

Query: 198 GLG-----TVGLGAVDGARMH 213
           G G     T  +    GA +H
Sbjct: 173 GFGGSAHLTAQVALAQGATVH 193

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 67/276 (24%), Positives = 103/276 (37%), Gaps = 60/276 (21%)

Query: 22  KVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG--FPAPLYPRVLGHEGVGVVESAGDE 79
            + ++ V  P   EV VK  +  +  +DI  + G   P    P   G EGVG V + G+ 
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEG 78

Query: 80  VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 139
           V + K GD V     G                                            
Sbjct: 79  VTDFKVGDAVATMSFG-------------------------------------------- 94

Query: 140 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-G 198
                ++EY V+ A + V V P + P     L  G  T   A  +  +++ G +V V   
Sbjct: 95  ----AFAEYQVVPARHAVPV-PELKPEVLPLLVSG-LTASIALEEVGEMKSGETVLVTAA 148

Query: 199 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT 258
            G  G  AV  A++ G   +IG   +  K E  K+ G    IN   E    + E++K   
Sbjct: 149 AGGTGQFAVQLAKLAG-CHVIGTCSSDEKAEFLKSLGCDRPINYKTE---DLGEVLKK-E 203

Query: 259 HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
           +  GVD  +E  G   +    ++   + KG++IVIG
Sbjct: 204 YPKGVDVVYESVG-GEMFDTCVDNLAL-KGRLIVIG 237

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 57/174 (32%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKST-----EVRVKMLYASVCHTDILCSEGFPAPL---Y 61
           KA++    G+PL+V+E+ +  P+       EV +K+  A +  +D+   +G         
Sbjct: 2   KALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKG-QYGSTKAL 60

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
           P   G EG G V +AG                                       +L G 
Sbjct: 61  PVPPGFEGSGTVVAAGGGP---------------------------------LAQSLIG- 86

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 175
                 R++          S  T++EY V DA   + +   +        +  F
Sbjct: 87  -----KRVAFLAG------SYGTYAEYAVADAQQCLPLPDGVSFEQG---ASSF 126

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 44.0 bits (105), Expect = 6e-05
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 10 KAVV--CWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRVL 65
          KA+V    G  E L++ E+    P   EV +++  A V   D+L  +G   P P    +L
Sbjct: 2  KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDIL 61

Query: 66 GHEGVGVVESAGDEVKEVKEGDIV 89
          G E  GVV + G  V   K GD V
Sbjct: 62 GLEVAGVVVAVGPGVTGWKVGDRV 85

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 21 LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--YPRVLGHEGVGVVESAGD 78
          L +  + ++     +V +++ Y+S+ + D L + G       YP   G +  G V S+ D
Sbjct: 15 LFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSSDD 74

Query: 79 EVKEVKEGDIVIPT 92
               +EGD V+ T
Sbjct: 75 --PRFREGDEVLVT 86

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 12/89 (13%)

Query: 10 KAVVCWGLGEPLKVE------EIQVEPPKST--EVRVKMLYASVCHTDI-LCSEGFPAPL 60
          KA+   G  +PL +       +I++  P     ++ V++   SV   D  + + G P P 
Sbjct: 2  KAI---GFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPG 58

Query: 61 YPRVLGHEGVGVVESAGDEVKEVKEGDIV 89
           P++LG +  GVVE+ G EV   K GD V
Sbjct: 59 QPKILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 42.0 bits (100), Expect = 3e-04
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 15/178 (8%)

Query: 147 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT--VGL 204
           EY+V+ A  ++ V   +   +A+ L   F T +   ++   ++ G +V + G G   VG 
Sbjct: 96  EYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHG-GASGVGT 154

Query: 205 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 264
            A+  A+  GA ++I    +  K E  +A G    IN   E     +E VK  T G GVD
Sbjct: 155 AAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRTE---DFAEEVKEATGGRGVD 210

Query: 265 YCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIALACGGR-TLKGTT 319
              +  G    L+  L       G++++IG+  G  A + L  +      R TL G+T
Sbjct: 211 VILDMVG-GDYLARNLRALAPD-GRLVLIGLLGGAKAELDLAPL---LRKRLTLTGST 263

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 58/293 (19%), Positives = 94/293 (32%), Gaps = 85/293 (29%)

Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASV------CHTDILCSEGFPAPLY--PRVLGHE-- 68
           +  ++EE+ V  P   +V ++ LY S+        +D        AP Y  P  LG    
Sbjct: 25  DDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD--------APSYAPPVELGEVMV 76

Query: 69  --GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
              V  V ++       + GDIV+                                    
Sbjct: 77  GGTVAKVVAS--NHPGFQPGDIVV------------------------------------ 98

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFT--TGYGAAWK 184
                           S W EY + D   + K+DPS  P  A     G    T Y     
Sbjct: 99  --------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLD 144

Query: 185 EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-IN- 241
             + + G +V V    G VG      A++ G  +++GI     K +        D  I+ 
Sbjct: 145 IGQPKAGETVVVSAAAGAVGSVVGQIAKLKG-CRVVGIAGGAEKCDFLTEELGFDAGIDY 203

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
             ++  +++ E         G+D  FE  G   +L   L    +   ++ V G
Sbjct: 204 KAEDFAQALKEAC-----PKGIDVYFENVGGE-VLDAVLPLLNL-FARIPVCG 249

Length = 340

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	375
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.98
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.98
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.96
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.96
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.9
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.78
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.53
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.44
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.29
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.6
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.56
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.41
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.33
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.2
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.14
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.13
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.07
PLN02494	477	adenosylhomocysteinase	98.06
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.87
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.84
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.77
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.68
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.66
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.65
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.58
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.51
PRK08324	681	short chain dehydrogenase; Validated	97.51
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.44
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.35
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.32
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.29
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.28
TIGR00438	188	rrmJ cell division protein FtsJ.	97.28
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.23
PRK14967	223	putative methyltransferase; Provisional	97.17
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.06
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.03
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.03
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.01
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.95
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.91
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.91
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.9
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.86
PRK05993	277	short chain dehydrogenase; Provisional	96.85
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.85
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.84
PRK04148	134	hypothetical protein; Provisional	96.84
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.82
COG4122	219	Predicted O-methyltransferase [General function pr	96.82
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.82
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.82
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.81
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.74
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.72
PRK05693	274	short chain dehydrogenase; Provisional	96.7
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.63
PRK12742	237	oxidoreductase; Provisional	96.61
PLN03209	576	translocon at the inner envelope of chloroplast su	96.6
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.55
PRK08017	256	oxidoreductase; Provisional	96.53
PRK06182	273	short chain dehydrogenase; Validated	96.53
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.53
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.52
PRK08177	225	short chain dehydrogenase; Provisional	96.47
PRK07060	245	short chain dehydrogenase; Provisional	96.45
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.42
PRK07402	196	precorrin-6B methylase; Provisional	96.42
PRK07326	237	short chain dehydrogenase; Provisional	96.42
PRK11207	197	tellurite resistance protein TehB; Provisional	96.39
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.38
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.38
PRK06139	330	short chain dehydrogenase; Provisional	96.38
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.35
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.35
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.3
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.28
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.28
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.25
PRK06949	258	short chain dehydrogenase; Provisional	96.24
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.23
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.2
PRK08618	325	ornithine cyclodeaminase; Validated	96.2
PRK06057	255	short chain dehydrogenase; Provisional	96.18
PRK07806	248	short chain dehydrogenase; Provisional	96.18
COG2910	211	Putative NADH-flavin reductase [General function p	96.17
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.14
PRK12829	264	short chain dehydrogenase; Provisional	96.13
PRK05872	296	short chain dehydrogenase; Provisional	96.12
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.12
PRK12939	250	short chain dehydrogenase; Provisional	96.11
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.11
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.09
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.07
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.03
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.03
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.03
PLN02366	308	spermidine synthase	96.03
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.02
PRK07831	262	short chain dehydrogenase; Provisional	95.99
PRK06953	222	short chain dehydrogenase; Provisional	95.98
PRK08339	263	short chain dehydrogenase; Provisional	95.98
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.97
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	95.96
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.96
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.96
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.95
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.95
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.95
PRK09072	263	short chain dehydrogenase; Provisional	95.94
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.93
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.92
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.9
PLN02780	320	ketoreductase/ oxidoreductase	95.89
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.89
PRK07814	263	short chain dehydrogenase; Provisional	95.87
PRK07340	304	ornithine cyclodeaminase; Validated	95.87
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.86
PRK06841	255	short chain dehydrogenase; Provisional	95.86
PRK07904	253	short chain dehydrogenase; Provisional	95.85
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.82
PRK12828	239	short chain dehydrogenase; Provisional	95.81
PRK06180	277	short chain dehydrogenase; Provisional	95.8
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.79
PRK04457	262	spermidine synthase; Provisional	95.78
PRK07825	273	short chain dehydrogenase; Provisional	95.77
PRK09291	257	short chain dehydrogenase; Provisional	95.75
PRK07574	385	formate dehydrogenase; Provisional	95.71
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.7
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.7
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.67
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.65
PRK08317	241	hypothetical protein; Provisional	95.65
PRK05866	293	short chain dehydrogenase; Provisional	95.65
PRK06196	315	oxidoreductase; Provisional	95.64
PRK06484	520	short chain dehydrogenase; Validated	95.63
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.63
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.62
PRK07024	257	short chain dehydrogenase; Provisional	95.6
PLN02735	1102	carbamoyl-phosphate synthase	95.58
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.57
PRK06198	260	short chain dehydrogenase; Provisional	95.56
PRK06500	249	short chain dehydrogenase; Provisional	95.55
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.54
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.53
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.53
PRK06179	270	short chain dehydrogenase; Provisional	95.53
CHL00194	317	ycf39 Ycf39; Provisional	95.51
PRK07832	272	short chain dehydrogenase; Provisional	95.49
PRK08264	238	short chain dehydrogenase; Validated	95.47
PRK07109	334	short chain dehydrogenase; Provisional	95.46
PRK05867	253	short chain dehydrogenase; Provisional	95.46
PRK07478	254	short chain dehydrogenase; Provisional	95.44
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.44
PRK07677	252	short chain dehydrogenase; Provisional	95.44
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.4
PRK06128	300	oxidoreductase; Provisional	95.4
PRK07576	264	short chain dehydrogenase; Provisional	95.37
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.37
PLN02476	278	O-methyltransferase	95.37
PRK00811	283	spermidine synthase; Provisional	95.36
PRK00536	262	speE spermidine synthase; Provisional	95.35
PLN03139	386	formate dehydrogenase; Provisional	95.35
PRK08267	260	short chain dehydrogenase; Provisional	95.35
PRK08265	261	short chain dehydrogenase; Provisional	95.34
PRK07577	234	short chain dehydrogenase; Provisional	95.33
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.32
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.32
PRK06483	236	dihydromonapterin reductase; Provisional	95.32
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.31
PRK06849	389	hypothetical protein; Provisional	95.3
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.29
PRK06181	263	short chain dehydrogenase; Provisional	95.29
PRK06125	259	short chain dehydrogenase; Provisional	95.27
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.26
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.25
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.25
PLN02244	340	tocopherol O-methyltransferase	95.25
PRK05717	255	oxidoreductase; Validated	95.24
PRK08703	239	short chain dehydrogenase; Provisional	95.23
PRK07062	265	short chain dehydrogenase; Provisional	95.23
PRK08862	227	short chain dehydrogenase; Provisional	95.21
PRK06101	240	short chain dehydrogenase; Provisional	95.2
PRK07774	250	short chain dehydrogenase; Provisional	95.19
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.18
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.17
PRK06194	287	hypothetical protein; Provisional	95.17
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.17
PRK06398	258	aldose dehydrogenase; Validated	95.15
PRK10258	251	biotin biosynthesis protein BioC; Provisional	95.14
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.14
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.11
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.11
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.09
PRK09186	256	flagellin modification protein A; Provisional	95.08
PRK08628	258	short chain dehydrogenase; Provisional	95.08
PRK04266	226	fibrillarin; Provisional	95.07
PRK08219	227	short chain dehydrogenase; Provisional	95.06
PRK06141	314	ornithine cyclodeaminase; Validated	95.05
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.05
PRK13243	333	glyoxylate reductase; Reviewed	95.03
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.03
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.03
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.02
PRK07454	241	short chain dehydrogenase; Provisional	95.01
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.01
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.0
PRK06172	253	short chain dehydrogenase; Provisional	95.0
PRK08643	256	acetoin reductase; Validated	95.0
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.97
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.97
PRK05876	275	short chain dehydrogenase; Provisional	94.95
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.95
PRK01581	374	speE spermidine synthase; Validated	94.94
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.92
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.91
PRK10538	248	malonic semialdehyde reductase; Provisional	94.91
PRK06138	252	short chain dehydrogenase; Provisional	94.91
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.9
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.9
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	94.9
PRK07890	258	short chain dehydrogenase; Provisional	94.89
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.89
PLN00203	519	glutamyl-tRNA reductase	94.88
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.87
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.86
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.86
PRK07035	252	short chain dehydrogenase; Provisional	94.85
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.85
PRK05875	276	short chain dehydrogenase; Provisional	94.85
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.85
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.84
PRK12367	245	short chain dehydrogenase; Provisional	94.84
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.82
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.82
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.81
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.8
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.8
PLN03075	296	nicotianamine synthase; Provisional	94.79
PRK07063	260	short chain dehydrogenase; Provisional	94.78
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.77
PRK08589	272	short chain dehydrogenase; Validated	94.75
PRK09242	257	tropinone reductase; Provisional	94.74
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.71
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.7
PRK12937	245	short chain dehydrogenase; Provisional	94.7
PRK05884	223	short chain dehydrogenase; Provisional	94.69
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.69
PRK05854	313	short chain dehydrogenase; Provisional	94.68
KOG0725	270	consensus Reductases with broad range of substrate	94.68
PRK07856	252	short chain dehydrogenase; Provisional	94.68
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.68
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.66
PRK06114	254	short chain dehydrogenase; Provisional	94.66
KOG1252	362	consensus Cystathionine beta-synthase and related	94.66
PRK06701	290	short chain dehydrogenase; Provisional	94.65
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	94.65
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.62
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.6
PRK06197	306	short chain dehydrogenase; Provisional	94.6
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	94.6
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.56
PRK07074	257	short chain dehydrogenase; Provisional	94.55
PRK07417	279	arogenate dehydrogenase; Reviewed	94.55
PRK06914	280	short chain dehydrogenase; Provisional	94.53
PRK06482	276	short chain dehydrogenase; Provisional	94.51
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.51
PRK06720	169	hypothetical protein; Provisional	94.51
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.51
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.49
PRK12747	252	short chain dehydrogenase; Provisional	94.49
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.48
PRK08328	231	hypothetical protein; Provisional	94.48
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.47
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.47
PLN02928	347	oxidoreductase family protein	94.45
PRK10669	558	putative cation:proton antiport protein; Provision	94.44
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.44
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.44
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.4
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.39
PRK08226	263	short chain dehydrogenase; Provisional	94.37
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.37
PRK07067	257	sorbitol dehydrogenase; Provisional	94.36
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.35
PLN02253	280	xanthoxin dehydrogenase	94.35
PRK08263	275	short chain dehydrogenase; Provisional	94.34
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.33
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.33
PRK08251	248	short chain dehydrogenase; Provisional	94.32
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.31
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.3
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.3
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.29
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.28
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.28
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.26
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.24
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	94.24
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.22
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	94.22
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.2
PRK06484	520	short chain dehydrogenase; Validated	94.18
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	94.17
PRK06940	275	short chain dehydrogenase; Provisional	94.15
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	94.15
PRK07102	243	short chain dehydrogenase; Provisional	94.14
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.14
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.09
PRK07791	286	short chain dehydrogenase; Provisional	94.08
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.06
PRK14982	340	acyl-ACP reductase; Provisional	94.05
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.04
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	94.03
PRK12480	330	D-lactate dehydrogenase; Provisional	94.02
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.02
PRK08303	305	short chain dehydrogenase; Provisional	94.02
PRK07985	294	oxidoreductase; Provisional	94.0
PRK08278	273	short chain dehydrogenase; Provisional	93.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.97
TIGR00452	314	methyltransferase, putative. Known examples to dat	93.97
PRK07097	265	gluconate 5-dehydrogenase; Provisional	93.95
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.94
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.92
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.91
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	93.91
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.88
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.87
PRK08655	437	prephenate dehydrogenase; Provisional	93.87
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.87
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.85
PRK11579	346	putative oxidoreductase; Provisional	93.85
PRK06523	260	short chain dehydrogenase; Provisional	93.84
COG0673	342	MviM Predicted dehydrogenases and related proteins	93.83
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	93.82
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.81
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.81
PLN02256	304	arogenate dehydrogenase	93.8
PRK05650	270	short chain dehydrogenase; Provisional	93.79
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.79
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.76
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	93.74
PRK12743	256	oxidoreductase; Provisional	93.73
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.71
PLN02490	340	MPBQ/MSBQ methyltransferase	93.69
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.68
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	93.68
PRK03659	601	glutathione-regulated potassium-efflux system prot	93.65
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.61
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	93.59
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	93.58
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.53
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	93.53
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.51
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	93.5
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	93.49
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.47
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	93.45
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	93.45
PRK13984	604	putative oxidoreductase; Provisional	93.45
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	93.39
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.38
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	93.37
PRK12814	652	putative NADPH-dependent glutamate synthase small	93.34
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.33
PRK08223	287	hypothetical protein; Validated	93.31
PLN02336	475	phosphoethanolamine N-methyltransferase	93.31
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.29
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.29
PRK10901	427	16S rRNA methyltransferase B; Provisional	93.27
PRK07775	274	short chain dehydrogenase; Provisional	93.27
PRK13403	335	ketol-acid reductoisomerase; Provisional	93.27
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	93.22
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	93.21
PRK03612	521	spermidine synthase; Provisional	93.2
PRK14904	445	16S rRNA methyltransferase B; Provisional	93.19
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	93.19

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5e-68  Score=481.35  Aligned_cols=333  Identities=33%  Similarity=0.513  Sum_probs=309.5

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            6 AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      +++|||+++.++++++++++++.|+|+++||+|+|+|+|+|++|+| +.|.++...+|.|+|||.+|+|+++|++|+.||
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            4689999999999999999999999999999999999999999999 999999988999999999999999999999999


Q ss_pred             CCCEEEe-eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           85 EGDIVIP-TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        85 ~Gd~V~~-~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      +||||.+ +...+|+.|++|++|++++|+..+..  |+..+|                  +||||+++++++++++|+++
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~--gy~~~G------------------Gyaeyv~v~~~~~~~iP~~~  140 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT--GYTTDG------------------GYAEYVVVPARYVVKIPEGL  140 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCcccc--ceeecC------------------cceeEEEEchHHeEECCCCC
Confidence            9999998 88999999999999999999998774  888887                  99999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++||.+.|++.|.|++|. ..+++||++|+|+|+|++|++|+|+|+++|+ +|++++++++|++.+++||++++++..
T Consensus       141 d~~~aApllCaGiT~y~alk-~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~  218 (339)
T COG1064         141 DLAEAAPLLCAGITTYRALK-KANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS  218 (339)
T ss_pred             ChhhhhhhhcCeeeEeeehh-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence            99999999999999999875 5999999999999999999999999999998 999999999999999999999999977


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC-CccccchHHHhhcCCceEEEEeecc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      +   ++..+.+++.     +|++||+++ +..++.++++|+++ |+++.+|... .....++.+.++.+++++.||..++
T Consensus       219 ~---~~~~~~~~~~-----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~  288 (339)
T COG1064         219 D---SDALEAVKEI-----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT  288 (339)
T ss_pred             C---chhhHHhHhh-----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence            6   6777777653     999999999 77999999999998 9999999994 4556788888888999999998774


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                         +.++++++++..++++++.  +.+.++++++++||+.|++++. +|+||++
T Consensus       289 ---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         289 ---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             ---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence               5789999999999999954  5479999999999999999988 6999864

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=5e-66  Score=457.92  Aligned_cols=362  Identities=41%  Similarity=0.732  Sum_probs=342.9

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      +++||++.+++++||+++++++++|++|||+||+.++|+|++|.+ ..|..|.+ +|.++|||.+|+|++||++|++++|
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            468999999999999999999999999999999999999999999 99998877 9999999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      ||+|+..+..+|+.|.+|++|.+++|...+-. ..|.+.+|+.+++-.|...++++|+++|+||.++++..++|++++.+
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p  159 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP  159 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence            99999999999999999999999999975433 25788999999999999999999999999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      ++.++++.|..+|.+.++...+++++|++|.|+|.|++|++++|-|+..|+.+|++++.+++|++++++||+++++|.++
T Consensus       160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~  239 (366)
T COG1062         160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE  239 (366)
T ss_pred             ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCcc-cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecc
Q 017201          245 EPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       245 ~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                         . +..+.+++++++ |+|++||++|+...+.+++.++.+. |..+.+|.... ...+++++.|... .+++|+.++.
T Consensus       240 ---~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~  313 (366)
T COG1062         240 ---VDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGG  313 (366)
T ss_pred             ---hhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeecc-ceEEEEeecC
Confidence               4 699999999998 9999999999999999999999995 99999998865 6777888888855 9999999998


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ...+.+++.++++..+|+++++++++++++|+|+++||+.|.+++.+|-||.+
T Consensus       314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~  366 (366)
T COG1062         314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF  366 (366)
T ss_pred             CccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence            88899999999999999999999999999999999999999999999999875

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-65  Score=447.76  Aligned_cols=369  Identities=47%  Similarity=0.826  Sum_probs=350.6

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .++.++||++.+++++||.+|++.+++|+.+||+||+.++++|++|.+ +.|..+...||.|+|||++|+|+.+|++|+.
T Consensus         3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~   82 (375)
T KOG0022|consen    3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT   82 (375)
T ss_pred             CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence            477899999999999999999999999999999999999999999999 9998888899999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCccccccccccc--ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL--NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~--~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      +++||+|+-.....|+.|.+|+++..++|.+.+...  .++..||..+|+.+|...+++.++.+|+||.++++..+++|+
T Consensus        83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId  162 (375)
T KOG0022|consen   83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID  162 (375)
T ss_pred             cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence            999999999999999999999999999999988764  355579999999999999999999999999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      ++.+++.++.+.|.++|+|.|++..++++||++|.|+|.|++|+++++-||+.|+.++++++.+++|.+.+++||+++++
T Consensus       163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i  242 (375)
T KOG0022|consen  163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI  242 (375)
T ss_pred             CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEe
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      |+.+. ....++.+.+.|++ |+|+-|||.|+.+.+.+++.+...+||+-+++|.... ...+++++.++ ++.++.|+.
T Consensus       243 Np~d~-~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~  319 (375)
T KOG0022|consen  243 NPKDL-KKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSA  319 (375)
T ss_pred             Chhhc-cccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEe
Confidence            99862 23588999999997 9999999999999999999999999999999998765 78888899888 799999999


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ++.++.+.+++.+++...+++++++++++++.||+++++||++|.+++..|-|+.+
T Consensus       320 FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~  375 (375)
T KOG0022|consen  320 FGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM  375 (375)
T ss_pred             cccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence            99999999999999999999999999999999999999999999999999998864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-60  Score=419.92  Aligned_cols=339  Identities=29%  Similarity=0.468  Sum_probs=300.7

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPA---PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~---~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      +|+|+++.+++ ++++++.|.|++ +|+||+|++.++|||+||+| +..+...   -+.|+++|||.+|+|.++|+.|++
T Consensus         4 ~~~A~vl~g~~-di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~   82 (354)
T KOG0024|consen    4 DNLALVLRGKG-DIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH   82 (354)
T ss_pred             ccceeEEEccC-ceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence            79999999998 599999999987 89999999999999999999 7766533   347999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +|+||||++.|..+|+.|+.||+|.|++|++..+.+++- .+                  |++++|++.++++++|||++
T Consensus        83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp-~~------------------G~la~y~~~~~dfc~KLPd~  143 (354)
T KOG0024|consen   83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPP-VD------------------GTLAEYYVHPADFCYKLPDN  143 (354)
T ss_pred             cccCCeEEecCCCccccchhhhCcccccCCccccccCCC-cC------------------CceEEEEEechHheeeCCCC
Confidence            999999999999999999999999999999977642221 22                  39999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      ++++++|++. +++++++|. +++++++|++|||+|+|++|+++...||.+|+.+|++++..++|++.++++|++.+.+.
T Consensus       144 vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~  221 (354)
T KOG0024|consen  144 VSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPS  221 (354)
T ss_pred             Cchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeec
Confidence            9999999988 699999985 68999999999999999999999999999999999999999999999999999987765


Q ss_pred             CCCC-cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          243 DDEP-NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       243 ~~~~-~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      .... ..++.+.++...+...+|+.|||+|....++.++..++.+ |.+++.|+.. ...+++......|++++.|++  
T Consensus       222 ~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~-~~~~fpi~~v~~kE~~~~g~f--  297 (354)
T KOG0024|consen  222 SHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGA-EEIQFPIIDVALKEVDLRGSF--  297 (354)
T ss_pred             cccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCC-CccccChhhhhhheeeeeeee--
Confidence            5411 1334455555555556999999999998999999999998 9988888776 688999999888999999986  


Q ss_pred             cccCCC-CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEe
Q 017201          322 GIKTKS-DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLIT  374 (375)
Q Consensus       322 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~  374 (375)
                        ++.. .++.+++++++|++++.++++++|+++++.+||+.+..++  ..|++|.
T Consensus       298 --ry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  298 --RYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             --eeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence              3344 8999999999999999999999999999999999998877  4699885

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.6e-60  Score=416.65  Aligned_cols=347  Identities=27%  Similarity=0.421  Sum_probs=310.7

Q ss_pred             CCC-CccceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEe
Q 017201            1 MSN-SQAITCKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESA   76 (375)
Q Consensus         1 m~~-~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~v   76 (375)
                      |+. ..|.+++++.++.++.  ++++.+++.|+++++||+|+++|+|||++|+| +.|.++...+|.|+|||.+|+|+++
T Consensus         1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence            443 4588999999999988  45558999999999999999999999999999 9999999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEe-eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201           77 GDEVKEVKEGDIVIP-TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY  155 (375)
Q Consensus        77 G~~v~~~~~Gd~V~~-~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  155 (375)
                      |++|+.|++||||-+ ....+|.+|++|+.|++++|++.....+|+.+||             ...+|+||+|+++++.+
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DG-------------t~~~ggf~~~~~v~~~~  147 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDG-------------TITQGGFQEYAVVDEVF  147 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCC-------------CCccCccceeEEEeeee
Confidence            999999999999975 6678999999999999999998777778888888             66678999999999999


Q ss_pred             EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHhhhc
Q 017201          156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAF  234 (375)
Q Consensus       156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~l  234 (375)
                      ++++|++++++.||.+.|+..|+|.+| ...++.||++|.|.|+|++|++++|+||++|+ +|++++++. +|.+.++.|
T Consensus       148 a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L  225 (360)
T KOG0023|consen  148 AIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL  225 (360)
T ss_pred             EEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc
Confidence            999999999999999999999999987 56788999999999997799999999999999 999999987 666777889


Q ss_pred             CCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCce
Q 017201          235 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRT  314 (375)
Q Consensus       235 g~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  314 (375)
                      |++.+++..+  +++..+.+...+++ ++|-|.+.  ..-.++.++.+++++ |+++++|.+.. +..++.+++..+.++
T Consensus       226 GAd~fv~~~~--d~d~~~~~~~~~dg-~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~-~~~~~~~~lil~~~~  298 (360)
T KOG0023|consen  226 GADVFVDSTE--DPDIMKAIMKTTDG-GIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK-PLKLDTFPLILGRKS  298 (360)
T ss_pred             CcceeEEecC--CHHHHHHHHHhhcC-cceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC-cccccchhhhcccEE
Confidence            9999888873  37888888887776 66666655  444789999999998 99999999985 999999999989999


Q ss_pred             EEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          315 LKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +.||.+++   +.+.++++++..++.+++.   .+..+++++++||++|.+++. .|.||.+
T Consensus       299 I~GS~vG~---~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  299 IKGSIVGS---RKETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             EEeecccc---HHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence            99999885   4789999999999999864   468899999999999999998 5998863

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.6e-55  Score=420.27  Aligned_cols=359  Identities=34%  Similarity=0.572  Sum_probs=305.7

Q ss_pred             eeEEEEecCC--------CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201            9 CKAVVCWGLG--------EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         9 ~~a~~~~~~~--------~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      |||+++.+++        +.++++++|.|+|+++||+|||.+++||++|++ +.|..+ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            7899999866        358999999999999999999999999999999 887654 356899999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK  158 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  158 (375)
                      ++++++||+|++.+..+|+.|++|+.|.++.|+...... .|...+|...+...+..+.+..+.|+|+||+.++++.+++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~  159 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK  159 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEE
Confidence            999999999999888899999999999999998754321 1222222222222222222222346999999999999999


Q ss_pred             cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      +|+++++++|+++++++.|||+++.+.+++++|++|||+|+|++|++++|+||..|+.+|++++++++|+++++++|++.
T Consensus       160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~  239 (371)
T cd08281         160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA  239 (371)
T ss_pred             CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence            99999999999999999999998878889999999999999999999999999999966999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKG  317 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~  317 (375)
                      ++++.+   +++.+.+++++++ ++|++||++|....+..++++++++ |+++.+|.... ...+++...++.+++++.+
T Consensus       240 ~i~~~~---~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  314 (371)
T cd08281         240 TVNAGD---PNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKG  314 (371)
T ss_pred             EeCCCc---hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence            998876   6788888888877 8999999999877899999999998 99999997653 3456777788889999999


Q ss_pred             EeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201          318 TTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI  373 (375)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi  373 (375)
                      +....+...++++++++++.+|++++.++++++|+|+++++||+.+.+++..|.||
T Consensus       315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            87655434467889999999999998888999999999999999999988875554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.8e-55  Score=419.74  Aligned_cols=369  Identities=46%  Similarity=0.858  Sum_probs=306.1

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      +++++|||+++.++++++.++++|.|+|+++||+|||.++|+|++|++ +.|..+ ...+|.++|||++|+|+++|++++
T Consensus         6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~   85 (381)
T PLN02740          6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE   85 (381)
T ss_pred             ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence            478899999999998779999999999999999999999999999999 888653 245789999999999999999999


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCccccccccccccc--ccCCCcccccccC--cceecccccCceeeeEEeecccEE
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG--LMLDSTSRMSVRG--QKLYHIFSCSTWSEYMVIDANYVV  157 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g--~~~~g~~~~~~~~--~~~~~~~~~g~~a~~~~v~~~~~~  157 (375)
                      .+++||+|++.+..+|+.|++|++++++.|+......+.  ...+|...+...|  ....+....|+|+||++++++.++
T Consensus        86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~  165 (381)
T PLN02740         86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV  165 (381)
T ss_pred             cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence            999999999999999999999999999999986532110  0001100000000  011112224699999999999999


Q ss_pred             EcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      ++|+++++++++.+++++.|||+++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus       166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~  245 (381)
T PLN02740        166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGIT  245 (381)
T ss_pred             ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCc
Confidence            99999999999999999999999887888999999999999999999999999999986699999999999999999999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEE
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLK  316 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~  316 (375)
                      .+++..+ ...++.+.+++++++ ++|++||++|.+..+..++.++++++|+++.+|.... ....++...++ +++++.
T Consensus       246 ~~i~~~~-~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~  322 (381)
T PLN02740        246 DFINPKD-SDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSIT  322 (381)
T ss_pred             EEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeEE
Confidence            9988765 112477788888877 8999999999877899999999883399999997753 22344444444 788999


Q ss_pred             EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      |+..+.+....+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus       323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence            98766544345688999999999999888899999999999999999988888999874

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=6.3e-55  Score=414.23  Aligned_cols=356  Identities=30%  Similarity=0.554  Sum_probs=304.5

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      ||||+++.+++++++++++|.|+|+++||+|||.++++|++|++ +.|..+ ..+|.++|||++|+|+++|++++++++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            69999999999889999999999999999999999999999999 877654 3478999999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|++.+..+|+.|++|++|.+++|............       ..|.......+.|+|+||+.++++.++++|++++++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-------~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~  152 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-------TDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPA  152 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-------ccCcccccccccccccceEEEehhheEECCCCCChh
Confidence            9999999999999999999999999853211000000       000000001123699999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +|+++++.+.+||+++.+.+++++|++|||+|+|++|++++|+|+..|+.+|++++++++|+++++++|++.++++.+  
T Consensus       153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--  230 (358)
T TIGR03451       153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--  230 (358)
T ss_pred             HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--
Confidence            999999999999988777788999999999999999999999999999956999999999999999999999998876  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                       .++.+.+++++++.++|++||++|++..+..++.+++++ |+++.+|.... ...++++..++.+++++.+++.+....
T Consensus       231 -~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  308 (358)
T TIGR03451       231 -TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLP  308 (358)
T ss_pred             -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCc
Confidence             678888888888778999999999877899999999998 99999997753 245677777777999999886443333


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ..+++++++++.+|++++.++++++|||+|+++||+.+++++..|++|.+
T Consensus       309 ~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~  358 (358)
T TIGR03451       309 ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL  358 (358)
T ss_pred             HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence            56788899999999999888899999999999999999988888998864

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=6.6e-55  Score=415.27  Aligned_cols=364  Identities=43%  Similarity=0.765  Sum_probs=302.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++...+++++++++|.|+|+++||+|||.++++|++|++ +.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            7899999988889999999999999999999999999999999 888765556799999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      +|++.+..+|+.|.+|+.|.++.|...... ..|+..+|...+..+|...++..+.|+|+||+.++++.++++|++++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~  161 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE  161 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence            999999999999999999999999874321 0133333322222233222223345799999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +++++++++.|||+++.+.+++++|++|||+|+|++|++++|+||.+|+++|++++++++|+++++++|++.+++..+ .
T Consensus       162 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~  240 (368)
T TIGR02818       162 EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-Y  240 (368)
T ss_pred             HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-c
Confidence            999999999999998877889999999999999999999999999999867999999999999999999999998763 1


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                      ..++.+.+++++++ ++|++||++|++..+..+++++++++|+++.+|.... ....++...+. ++..+.++..+....
T Consensus       241 ~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~  318 (368)
T TIGR02818       241 DKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGGVKG  318 (368)
T ss_pred             chhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccCCCc
Confidence            13566778888877 8999999999877889999999873499999997642 33445555555 344567765443333


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      +.++.++++++.++++++.++++++|||+++++|++.+.+++..|++|.+
T Consensus       319 ~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       319 RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence            45788999999999999888899999999999999999888778999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.8e-54  Score=412.50  Aligned_cols=365  Identities=45%  Similarity=0.803  Sum_probs=307.1

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      .+|||+++...+++++++++|.|+|+++||+|||.++++|++|++ +.|..+...+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v   80 (368)
T cd08300           1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP   80 (368)
T ss_pred             CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence            378999999888889999999999999999999999999999999 8887665578999999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      ||+|++.+..+|+.|++|++++++.|+..... ..|...+|...+..+|...++..+.|+|+||+.++++.++++|++++
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            99999999999999999999999999874321 12333333222333333333344557999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +++++++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++++
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~  240 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            99999999999999998877889999999999999999999999999999867999999999999999999999998765


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                       .++++.+.+++++++ ++|+|||++|+...+..+++++++++|+++.+|.... ....++...+. +..++.++..+.+
T Consensus       241 -~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~  317 (368)
T cd08300         241 -HDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGW  317 (368)
T ss_pred             -cchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEeccc
Confidence             112577888888877 8999999999877889999999874499999997642 23444554454 4456777766555


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                      ....+++++++++.++++++.++++++|+|+++++||+.+.+++..|++|+
T Consensus       318 ~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         318 KSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             CcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence            556678899999999999988889999999999999999988887899874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=7.2e-54  Score=408.72  Aligned_cols=365  Identities=46%  Similarity=0.874  Sum_probs=306.3

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      ++|||+++.+++++++++++|+|+|+++||+||+.++++|++|++ +.|..+...+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (369)
T cd08301           1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP   80 (369)
T ss_pred             CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence            489999999988889999999999999999999999999999999 8887665678999999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCccccccccccc-ccccC-CCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~-~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      ||+|++.+..+|+.|..|++|+++.|....... .|... ++...+..+|...++..+.|+|+||++++++.++++|+++
T Consensus        81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~  160 (369)
T cd08301          81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA  160 (369)
T ss_pred             CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence            999999999999999999999999998753210 12211 1111111222222233344699999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++++++++++.|||+++++.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++.+++..
T Consensus       161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~  240 (369)
T cd08301         161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK  240 (369)
T ss_pred             CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence            99999999999999999888888999999999999999999999999999986799999999999999999999988876


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      + ..+.+.+.+++++++ ++|++||++|....+..++.++++++|+++.+|.... ...+++...++ +++++.|+....
T Consensus       241 ~-~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~  317 (369)
T cd08301         241 D-HDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGG  317 (369)
T ss_pred             c-cchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCC
Confidence            4 113566777887776 8999999999877889999999993289999998753 34455655555 789999987665


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                      +..+.+++++++++.++++++.++++++|||+++++||+.+.+++..|++|.
T Consensus       318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  369 (369)
T cd08301         318 YKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH  369 (369)
T ss_pred             CChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence            5445578899999999999888888999999999999999999988899873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=7.4e-54  Score=407.88  Aligned_cols=364  Identities=53%  Similarity=0.925  Sum_probs=308.0

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      +.|||+++.+.+++++++++|.|+++++||+|||.++++|++|++ +.|..+ ..+|.++|||++|+|+++|++++.+++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            368999999888789999999999999999999999999999999 887654 567899999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||+|++.+..+|+.|++|++|.+++|+.......|...+++..++..|...+.+.+.|+|+||++++++.++++|+++++
T Consensus        80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~  159 (365)
T cd08277          80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL  159 (365)
T ss_pred             CCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence            99999999999999999999999999986654345544443333322333222334579999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++++++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++.+++..+ 
T Consensus       160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-  238 (365)
T cd08277         160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD-  238 (365)
T ss_pred             HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc-
Confidence            9999999999999998878889999999999999999999999999999867999999999999999999999988764 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                      ...++.+.++++++ .++|+|||++|+...+..+++++++++|+++.+|...+...++++..++ +++++.++..+.+..
T Consensus       239 ~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~  316 (365)
T cd08277         239 SDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLI-LGRTWKGSFFGGFKS  316 (365)
T ss_pred             ccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHh-hCCEEEeeecCCCCh
Confidence            11245677777777 4899999999987788999999987339999999765334456666666 488999887665544


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                      +.+++++++++.++++++.++++++|+|+|+++||+.+.+++..|++|+
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~  365 (365)
T cd08277         317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT  365 (365)
T ss_pred             HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence            5578999999999999888889999999999999999988887899874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=4.4e-53  Score=398.95  Aligned_cols=336  Identities=28%  Similarity=0.450  Sum_probs=293.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+++ .++++++|.|+|+++||+||+.++++|++|++ +.+.... ..+|.++|||++|+|+++|++|+.+++|
T Consensus         1 mka~~~~~~~-~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDR-TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCC-ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            7899999776 59999999999999999999999999999999 7766432 3358899999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|++.+..+|+.|++|++|+++.|+..... +|...+|                  +|+||+.++++.++++|++++++
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~g~~~~G------------------~~ae~~~v~~~~~~~~P~~~~~~  140 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRAA-YGWNRDG------------------GHAEYMLVPEKTLIPLPDDLSFA  140 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCcccc-cccCCCC------------------cceeEEEechHHeEECCCCCCHH
Confidence            9999999999999999999999999876531 3443343                  99999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +|+++++++.|||+++ ..+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++++++  
T Consensus       141 ~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--  217 (339)
T cd08239         141 DGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--  217 (339)
T ss_pred             HhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--
Confidence            9999999999999987 5678999999999999999999999999999944999999999999999999999998876  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH-HHhhcCCceEEEEeeccccC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  325 (375)
                       .+ .+.+.+++++.++|++||++|+...+..++++++++ |+++.+|.....  .++. ..++.+++++.++...+   
T Consensus       218 -~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---  289 (339)
T cd08239         218 -DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS---  289 (339)
T ss_pred             -ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC---
Confidence             45 667777777778999999999987778999999998 999999976532  3332 34667999999986432   


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      .+++.++++++.++++++.++++++|+++++++||+.+.++..+|+||++
T Consensus       290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence            35789999999999999888899999999999999999887778999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.5e-53  Score=403.55  Aligned_cols=363  Identities=43%  Similarity=0.829  Sum_probs=298.2

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      ..|||+++.++++.++++++|+|+|+++||+|||.++|+|++|++ +.+..   .+|.++|||++|+|+++|++++++++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~   87 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK   87 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence            469999999888779999999999999999999999999999999 76642   46789999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccC-CCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      ||+|++.+..+|+.|++|++|++++|+.......|... +....+...|....++...|+|+||+.++++.++++|++++
T Consensus        88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~  167 (378)
T PLN02827         88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP  167 (378)
T ss_pred             CCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence            99999999999999999999999999874221011110 00000000010000011236999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +++++.+++++.++|++++..+++++|++|||+|+|++|++++|+|+.+|++.|++++++++|.++++++|++.++++++
T Consensus       168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~  247 (378)
T PLN02827        168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND  247 (378)
T ss_pred             HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence            99999999899999988777788999999999999999999999999999866888888999999999999999998764


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH-HHhhcCCceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  323 (375)
                       ..+++.+.+++++++ ++|+|||++|....+..+++++++++|+++.+|.+.. ...+++ ..++.+++++.|+....+
T Consensus       248 -~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~  324 (378)
T PLN02827        248 -LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-KPEVSAHYGLFLSGRTLKGSLFGGW  324 (378)
T ss_pred             -cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-CccccccHHHHhcCceEEeeecCCC
Confidence             113577778888776 8999999999877889999999994399999998753 233433 345669999999876554


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ....++.++++++.++++++.++++++|+|+++++|++.+.+++..|+||.+
T Consensus       325 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~  376 (378)
T PLN02827        325 KPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM  376 (378)
T ss_pred             chhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence            4445788999999999999877899999999999999999988878999864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-52  Score=393.24  Aligned_cols=336  Identities=23%  Similarity=0.353  Sum_probs=281.7

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCC-CC--CCCCCcccCcceeEEEEEeCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEG-FP--APLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~-~~--~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ..+||+++.++++ +++++++.| ++++||+|||.++|||++|++ +.++ .+  ...+|.++|||++|+|+++  +++.
T Consensus         3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            4689999998875 999999987 589999999999999999999 7533 22  2457999999999999999  6889


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      |++||+|++.+..+|+.|++|++|+++.|+.....  |.....             ....|+|+||++++++.++++|++
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~--g~~~~~-------------~~~~G~~aey~~v~~~~~~~~P~~  143 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF--GSAMYF-------------PHVDGGFTRYKVVDTAQCIPYPEK  143 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCccee--eccccc-------------CCCCCceeeeEEechHHeEECCCC
Confidence            99999999999999999999999999999885542  221000             001249999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++++++.. .++++||+++. .....+|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++++
T Consensus       144 l~~~~aa~~-~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~  221 (343)
T PRK09880        144 ADEKVMAFA-EPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNP  221 (343)
T ss_pred             CCHHHHHhh-cHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecC
Confidence            999776644 47789999874 4566789999999999999999999999999779999999999999999999999988


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      .+   +++.+.. +. .+ ++|+|||++|++..+..++++++++ |+++.+|... ...++++..++.|++++.++..  
T Consensus       222 ~~---~~~~~~~-~~-~g-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~--  291 (343)
T PRK09880        222 QN---DDLDHYK-AE-KG-YFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG-APPEFPMMTLIVKEISLKGSFR--  291 (343)
T ss_pred             Cc---ccHHHHh-cc-CC-CCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC-CCCccCHHHHHhCCcEEEEEee--
Confidence            76   4544322 22 23 6999999999877889999999998 9999999765 3456777778789999998753  


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                        ..+++++++++++++++++.++++++|+|+++++|++.+.+++. +|++|.+
T Consensus       292 --~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        292 --FTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             --ccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence              24678999999999999988889999999999999999988765 6999874

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=2.9e-52  Score=392.33  Aligned_cols=344  Identities=27%  Similarity=0.399  Sum_probs=285.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCc-ccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPR-VLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~-i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |+++++..++...++++.+.|.+.++||+|||.++|||+||+| +.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            6778888777655588887777789999999999999999999 998876655666 99999999999999 77889999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc-CCCCCc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV-DPSIDP  165 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l-p~~~~~  165 (375)
                      |||++.+..+|+.|.+|+.|.++.|++..+.  |....+             ..-.|+|+||+++|.++++++ |+++ .
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~--g~~~~~-------------~~~~G~~aEyv~vp~~~~~~~~pd~~-~  143 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFY--GYAGLG-------------GGIDGGFAEYVRVPADFNLAKLPDGI-D  143 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCcccc--cccccc-------------CCCCCceEEEEEeccccCeecCCCCC-C
Confidence            9999999999999999999999999965432  222100             000149999999997655555 7887 5


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~  244 (375)
                      .+++++..++.+++++.......+++++|+|+|+|++|++++++|+.+|+++|++++.+++|++++++ .+++.+++..+
T Consensus       144 ~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~  223 (350)
T COG1063         144 EEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE  223 (350)
T ss_pred             hhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc
Confidence            55555555899997764455566667799999999999999999999999999999999999999998 67777776655


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                         ++....+.+.+++.++|++|||+|...++.+++++++++ |+++.+|.+......++...++.|++++.|+...  .
T Consensus       224 ---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~--~  297 (350)
T COG1063         224 ---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRP--S  297 (350)
T ss_pred             ---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccCccCHHHHHhcccEEEeccCC--C
Confidence               467788888999899999999999998899999999998 9999999987422267777888899999998421  2


Q ss_pred             CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEeC
Q 017201          325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLITI  375 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~~  375 (375)
                      ....++.+++++.+|++++.+++++.++++++++||+.+.+++  ..|+++.+
T Consensus       298 ~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         298 GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            3468999999999999999999999999999999999998754  46999864

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1e-50  Score=388.21  Aligned_cols=344  Identities=25%  Similarity=0.346  Sum_probs=276.4

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCC-------CCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPK-------STEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      -|||+++.+++ .++++++|.|+|+       +|||+|||.++|||++|++ +.|..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~mka~v~~~~~-~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (393)
T TIGR02819         2 GNRGVVYLGPG-KVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD   79 (393)
T ss_pred             CceEEEEecCC-ceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence            48999999888 4999999999874       6899999999999999999 877643 356899999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccc----cccccCCCcccccccCcceecccccCceeeeEEeecc-
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA----LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-  154 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-  154 (375)
                      |+++++||||++.+..+|+.|++|++|+++.|+.....    .+|+...+              .-.|+|+||+.+++. 
T Consensus        80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~--------------~~~G~~aey~~v~~~~  145 (393)
T TIGR02819        80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG--------------GWVGGQSEYVMVPYAD  145 (393)
T ss_pred             cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC--------------CCCCceEEEEEechhh
Confidence            99999999999999999999999999999999974311    01211000              002599999999964 


Q ss_pred             -cEEEcCCCCCc----ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201          155 -YVVKVDPSIDP----SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE  229 (375)
Q Consensus       155 -~~~~lp~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~  229 (375)
                       .++++|++++.    .+++++.+++.+||+++ ..+++++|++|||.|+|++|++++|+|+.+|++.|++++++++|++
T Consensus       146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~  224 (393)
T TIGR02819       146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA  224 (393)
T ss_pred             CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence             79999998754    34677777899999976 4678999999999988999999999999999955666677889999


Q ss_pred             HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh--------------hhHHHHHHhcccCCeEEEEEcc
Q 017201          230 KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP--------------SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       230 ~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +++++|++.+....+   .++.+.+.+++++.++|++||++|.+              ..+++++++++++ |+++.+|.
T Consensus       225 ~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~  300 (393)
T TIGR02819       225 QARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL  300 (393)
T ss_pred             HHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence            999999975433333   46777788888777899999999985              3799999999998 99999998


Q ss_pred             CC-Ccc-----------ccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCccee-eEeecccHHHHHHH
Q 017201          296 GV-DAM-----------VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQL  362 (375)
Q Consensus       296 ~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~  362 (375)
                      +. ...           .++....++.+++++.++.   ....+.+.++++++.+|++++.++++ ++|||+++++||+.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~  377 (393)
T TIGR02819       301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE  377 (393)
T ss_pred             cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence            63 111           2233444455667776632   11122346799999999999877777 78999999999999


Q ss_pred             HcCCCeeEEEEeC
Q 017201          363 LKQPDCVKVLITI  375 (375)
Q Consensus       363 ~~~~~~~kvvi~~  375 (375)
                      +.+++..|++|.+
T Consensus       378 ~~~~~~~Kvvi~~  390 (393)
T TIGR02819       378 FDAGAAKKFVIDP  390 (393)
T ss_pred             HhhCCceEEEEeC
Confidence            9888778999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.9e-50  Score=383.22  Aligned_cols=341  Identities=27%  Similarity=0.441  Sum_probs=280.3

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      -|+.+.++.+.+..+.+++.+++.|+|+++||+|||.++|+|++|++ +.|.++...+|.++|||++|+|+++|++|+.+
T Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   88 (360)
T PLN02586          9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKF   88 (360)
T ss_pred             chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCcc
Confidence            46677777777777779999999999999999999999999999999 87766545678999999999999999999999


Q ss_pred             CCCCEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           84 KEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        84 ~~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      ++||+|++.+. .+|+.|++|++|.+++|++..........+|             ....|+|+||+.++++.++++|++
T Consensus        89 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~lP~~  155 (360)
T PLN02586         89 KEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDG-------------TKNYGGYSDMIVVDQHFVLRFPDN  155 (360)
T ss_pred             CCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCC-------------CcCCCccceEEEEchHHeeeCCCC
Confidence            99999986554 6899999999999999987543110000001             001249999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~~v~~  241 (375)
                      +++++++++++.+.|||+++.....+++|++|||.|+|++|++++|+||.+|+ +|++++.+++++ +.++++|++.+++
T Consensus       156 ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~  234 (360)
T PLN02586        156 LPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLV  234 (360)
T ss_pred             CCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEc
Confidence            99999999999999999987666667899999999999999999999999999 788877766654 5667899999988


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      ..+   .   +.+++.++  ++|+|||++|....++.++++++++ |+++.+|... ....+++..++.++..+.++..+
T Consensus       235 ~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~  304 (360)
T PLN02586        235 STD---P---EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE-KPLELPIFPLVLGRKLVGGSDIG  304 (360)
T ss_pred             CCC---H---HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC-CCCccCHHHHHhCCeEEEEcCcC
Confidence            654   2   23444443  6999999999876889999999998 9999999764 34567777777788888877643


Q ss_pred             cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +   ..+++++++++.+|++++.  + ++|+|+|+++||+.+.+++. +|+||++
T Consensus       305 ~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        305 G---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             C---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            2   3568999999999999853  4 58999999999999988876 6999864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.1e-50  Score=376.89  Aligned_cols=315  Identities=30%  Similarity=0.385  Sum_probs=269.6

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~-~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++.+.+.+  ++++++|.|+|++|||+|||.++++|+.|++ +.|. .+...+|+++|.|++|+|+++|++|+.++
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            788999887765  8889999999999999999999999999999 8886 33456899999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||||+... ..                       +  .                  .|+|+||+.++++.++++|+++|
T Consensus        81 ~GdrV~~~~-~~-----------------------~--~------------------~G~~AEy~~v~a~~~~~~P~~ls  116 (326)
T COG0604          81 VGDRVAALG-GV-----------------------G--R------------------DGGYAEYVVVPADWLVPLPDGLS  116 (326)
T ss_pred             CCCEEEEcc-CC-----------------------C--C------------------CCcceeEEEecHHHceeCCCCCC
Confidence            999998653 10                       0  1                  24999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +++||++++++.|||+++....++++|++|||+|+ |++|.+++||||++|+ .++++++++++.++++++|+++++++.
T Consensus       117 ~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~  195 (326)
T COG0604         117 FEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYR  195 (326)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCC
Confidence            99999999999999999999899999999999987 9999999999999998 677777777888899999999999998


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC-CccccchHHHhhcCCceEEEEeecc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      +   .++.+.++++++++++|+|+|++|+. .+..++.+|+++ |+++.+|..+ .....++...+..+.+++.+.....
T Consensus       196 ~---~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~  270 (326)
T COG0604         196 E---EDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS  270 (326)
T ss_pred             c---ccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence            8   78999999999999999999999998 888999999998 9999999887 3566677777777888888876543


Q ss_pred             c---cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC-CCe-eEEEEeC
Q 017201          323 I---KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ-PDC-VKVLITI  375 (375)
Q Consensus       323 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~-~kvvi~~  375 (375)
                      .   ...+.+.++.+++.+|++++  .++.+|||++..++...... ++. +|+||++
T Consensus       271 ~~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         271 RDPEALAEALAELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             cchHHHHHHHHHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            2   11234566889999999994  47899999995555443333 344 6999974

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.9e-49  Score=375.34  Aligned_cols=335  Identities=26%  Similarity=0.374  Sum_probs=286.3

Q ss_pred             EEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201           12 VVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV   89 (375)
Q Consensus        12 ~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V   89 (375)
                      +++.+++++++++++|.|+|+++||+|||.++++|++|++ +.+.. +...+|.++|||++|+|+++|++++.+ +||+|
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            4566777679999999999999999999999999999998 64443 234678999999999999999999887 99999


Q ss_pred             EeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC------CC
Q 017201           90 IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP------SI  163 (375)
Q Consensus        90 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~------~~  163 (375)
                      ++.+..+|+.|.+|++|++++|.....  .|...+                  |+|+||+.++++.++++|+      ++
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~~~  140 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKM--PGNDMQ------------------GGFASHIVVPAKGLCVVDEARLAAAGL  140 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCc--cCcCCC------------------CcccceEEechHHeEECCcccccccCC
Confidence            999999999999999999999986443  233333                  4999999999999999999      89


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++++.+++++.+||+++. ..++++|++|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.+++..
T Consensus       141 ~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~  218 (349)
T TIGR03201       141 PLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPK  218 (349)
T ss_pred             CHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCc
Confidence            99999999999999999864 5789999999999999999999999999999 899999999999999999999998876


Q ss_pred             CCCcccHHHHHHhhcCCCCcc----EEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201          244 DEPNKSISELVKGITHGMGVD----YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d----~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      +.+.+++.+.+++++++.++|    +|||++|+...++.++++++++ |+++.+|.... ...+++..++.++.++.+++
T Consensus       219 ~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~  296 (349)
T TIGR03201       219 DKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA-KTEYRLSNLMAFHARALGNW  296 (349)
T ss_pred             cccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC-CcccCHHHHhhcccEEEEEe
Confidence            521235777788888877886    8999999987888999999998 99999997753 44666667777788888875


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..   ...+++++++++.+|++++.++++ +|||+++++||+.+++++. .|+++++
T Consensus       297 ~~---~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       297 GC---PPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             cC---CHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence            32   245789999999999998877765 7999999999999988876 4888764

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3e-49  Score=376.26  Aligned_cols=335  Identities=24%  Similarity=0.410  Sum_probs=274.5

Q ss_pred             EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201           11 AVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV   89 (375)
Q Consensus        11 a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V   89 (375)
                      +++..+....+++++++.|+|+++||+|||.++|+|++|++ +.|.++...+|.++|||++|+|+++|++++++++||+|
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            44445554569999999999999999999999999999999 88766444578999999999999999999999999999


Q ss_pred             EeeccC-CCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccc
Q 017201           90 IPTYIG-ECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA  168 (375)
Q Consensus        90 ~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~a  168 (375)
                      ++.+.. +|+.|++|++|++++|+.......+....|             ....|+|+||+.++++.++++|++++++++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~~a  155 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSDSG  155 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCccccccccccCC-------------CcCCCccccEEEEchHHeEECCCCCCHHHc
Confidence            876654 699999999999999997543100000000             001249999999999999999999999999


Q ss_pred             cccccchhhhhhhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHhhhcCCcEEeCCCCCC
Q 017201          169 SFLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       169 a~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lg~~~v~~~~~~~  246 (375)
                      ++++++..|||+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|+++++++++ .++++++|++.++++.+  
T Consensus       156 a~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--  232 (375)
T PLN02178        156 APLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--  232 (375)
T ss_pred             chhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--
Confidence            9999999999988754332 3689999999999999999999999999 78888876554 67888999999988654  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                       .   +.+++.++  ++|++||++|.+..+..++++++++ |+++.+|... ....+++..++.+++++.|+...+   .
T Consensus       233 -~---~~v~~~~~--~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~  301 (375)
T PLN02178        233 -S---QKMKEAVG--TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG---M  301 (375)
T ss_pred             -H---HHHHHhhC--CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC---H
Confidence             2   34455443  6999999999887789999999998 9999999765 345677777777999999886442   3


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .++.++++++.+|++++.  + ++|||+++++||+.+.+++. +|+|+.+
T Consensus       302 ~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        302 KETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             HHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            568899999999999854  4 57999999999999988876 6999864

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-49  Score=372.71  Aligned_cols=337  Identities=26%  Similarity=0.354  Sum_probs=283.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+++ .++++++|.|+| .++||+|||.++++|++|++ +.... ...+|.++|||++|+|+++|++++++++|
T Consensus         1 Mka~~~~~~~-~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDG-IVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCC-ceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            6899999877 499999999987 69999999999999999997 43221 12357899999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|++.+..+|+.|++|+.|.++.|.....  .|...+                  |+|+||+.++++.++++|++++++
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~~------------------G~~aey~~v~~~~~~~lP~~~s~~  138 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSRRD------------------GGNAEYIVVKRKNLFALPTDMPIE  138 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCcce--eccCCC------------------CccceeEEeehHHeEECcCCCCHH
Confidence            999999999999999999999999976432  233333                  499999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +++.+. .++++++++ ....+++|++|||+|+|++|++++|+|+++|++.|++++++++++++++++|++.+++.++  
T Consensus       139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--  214 (347)
T PRK10309        139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--  214 (347)
T ss_pred             Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--
Confidence            998874 456677764 5678899999999999999999999999999955889999999999999999999998775  


Q ss_pred             cccHHHHHHhhcCCCCcc-EEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccch---HHHhhcCCceEEEEeecc
Q 017201          247 NKSISELVKGITHGMGVD-YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN---VIALACGGRTLKGTTFGG  322 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d-~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  322 (375)
                       .+ .+.+.+++.+.++| ++|||+|+...+..++++++++ |+++.+|.... ..+++   +..++.+++++.++....
T Consensus       215 -~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~  290 (347)
T PRK10309        215 -MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHH-DLHLTSATFGKILRKELTVIGSWMNY  290 (347)
T ss_pred             -cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CcccChhhhhHHhhcCcEEEEEeccc
Confidence             34 45567777666898 9999999887899999999998 99999997653 22333   234667899999986542


Q ss_pred             cc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          323 IK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       323 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..  .+.+++++++++++|++++.++++++|+|+++++|++.+.+++. +|+|+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            11  13568889999999999888889999999999999999988775 6999874

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=7.8e-49  Score=367.85  Aligned_cols=321  Identities=23%  Similarity=0.326  Sum_probs=272.8

Q ss_pred             EEEecCC----CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201           12 VVCWGLG----EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus        12 ~~~~~~~----~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      +.+..++    ..++++++|.|+|+++||+|||.++++|++|++ +.|..+...+|.++|||++|+|+++|++++++++|
T Consensus         2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG   81 (329)
T ss_pred             eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence            4444444    358999999999999999999999999999999 88876544457899999999999999999999999


Q ss_pred             CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      |+|++.+. .+|+.|++|.+|+++.|+....  .|+..+|                  +|+||+.++++.++++|+++++
T Consensus        82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~lP~~~~~  141 (329)
T TIGR02822        82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWDTDG------------------GYAEYTTVPAAFAYRLPTGYDD  141 (329)
T ss_pred             CEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcccCC------------------cceeEEEeccccEEECCCCCCH
Confidence            99987654 5799999999999999988654  2444344                  9999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++++.+++.+.|||+++. .+++++|++|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.+++..+ 
T Consensus       142 ~~aa~l~~~~~ta~~~~~-~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~-  218 (329)
T TIGR02822       142 VELAPLLCAGIIGYRALL-RASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD-  218 (329)
T ss_pred             HHhHHHhccchHHHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc-
Confidence            999999999999999874 6889999999999999999999999999999 8999999999999999999999987543 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                        ..          ..++|+++++.+..+.+..++++++++ |+++.+|........+++..++.+++++.++...   .
T Consensus       219 --~~----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~---~  282 (329)
T TIGR02822       219 --TP----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN---T  282 (329)
T ss_pred             --cC----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC---C
Confidence              11          126899999888777899999999997 9999999753333456666667789999887532   2


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      +.++.++++++.++++++   ++++|+|+|+++|++.+.+++. +|+||.
T Consensus       283 ~~~~~~~~~l~~~g~i~~---i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~  329 (329)
T TIGR02822       283 RADAREFLELAAQHGVRV---TTHTYPLSEADRALRDLKAGRFDGAAVLV  329 (329)
T ss_pred             HHHHHHHHHHHHhCCCee---EEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence            346788999999999863   5789999999999999988877 598873

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.3e-48  Score=370.55  Aligned_cols=333  Identities=28%  Similarity=0.361  Sum_probs=266.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC---CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA---PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~---~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++..++.+++++++|.|+|+++||+|||.++++|++|++ +.|.++.   ..+|.++|||++|+|+++|++ +.++
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            6889988655459999999999999999999999999999999 8876532   246889999999999999999 9999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|++.+..+|+.|.+|++|++++|........|...                 ..|+|+||+.++++.++++|++++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~-----------------~~G~~aey~~~~~~~~~~~P~~~~  142 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKG-----------------LHGFMREYFVDDPEYLVKVPPSLA  142 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCC-----------------CCccceeEEEeccccEEECCCCCC
Confidence            999999998889999999999999999864321112110                 124999999999999999999998


Q ss_pred             cccccccccchhhhhhhhh------hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcC
Q 017201          165 PSDASFLSCGFTTGYGAAW------KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFG  235 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~------~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg  235 (375)
                       + ++++..++++++.++.      ...+.++|++|||+|+|++|++++|+||+.|+ +|+++++   +++|+++++++|
T Consensus       143 -~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~G  219 (355)
T cd08230         143 -D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELG  219 (355)
T ss_pred             -c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcC
Confidence             3 3444445555544432      22336799999999999999999999999999 8999987   688999999999


Q ss_pred             CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccch----HHHhhc
Q 017201          236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLN----VIALAC  310 (375)
Q Consensus       236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~----~~~~~~  310 (375)
                      ++. +++.+   +++.+ .+ .  ..++|+|||++|++..+..++++++++ |+++.+|...+ ...+++    ...++.
T Consensus       220 a~~-v~~~~---~~~~~-~~-~--~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~  290 (355)
T cd08230         220 ATY-VNSSK---TPVAE-VK-L--VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL  290 (355)
T ss_pred             CEE-ecCCc---cchhh-hh-h--cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence            987 45554   34433 21 1  237999999999877889999999998 99999998764 344555    345677


Q ss_pred             CCceEEEEeeccccCCCCHHHHHHHHHcCCC----CCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          311 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF----KLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      |++++.|+...   ..++++++++++.++.+    .+.++++++|+++++++||+.+.++. .|+||++
T Consensus       291 k~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~  355 (355)
T cd08230         291 GNKALVGSVNA---NKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW  355 (355)
T ss_pred             cCcEEEEecCC---chhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence            99999997533   24578889999988762    24567899999999999999987654 5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=2.1e-47  Score=364.24  Aligned_cols=366  Identities=40%  Similarity=0.718  Sum_probs=298.6

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      +-.+|||+++..++++++++++|.|++.++||+||+.++++|++|++ +.|..+ ..+|.++|||++|+|+++|++++.+
T Consensus         4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~   82 (373)
T cd08299           4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV   82 (373)
T ss_pred             ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence            45679999999988889999999999999999999999999999999 887653 3568899999999999999999999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      ++||+|++.+..+|+.|++|.+++++.|++..... .|...++...++..|....+.++.|+|+||++++.+.++++|++
T Consensus        83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~  162 (373)
T cd08299          83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA  162 (373)
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence            99999999999999999999999999998743210 12222222222222222222223579999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++++++++++++.+||+++...+++++|++|||+|+|++|++++++|+..|+.+|+++++++++++.++++|++.+++.
T Consensus       163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~  242 (373)
T cd08299         163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP  242 (373)
T ss_pred             CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence            99999999999999999988788899999999999889999999999999998679999999999999999999999887


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhc-ccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEee
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT-KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      .+ ...++.+.+.+++++ ++|++||++|++..+..++..+ +++ |+++.+|.... ...++++..+. ++.++.++..
T Consensus       243 ~~-~~~~~~~~v~~~~~~-~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~  318 (373)
T cd08299         243 QD-YKKPIQEVLTEMTDG-GVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLL-TGRTWKGAVF  318 (373)
T ss_pred             cc-cchhHHHHHHHHhCC-CCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHh-cCCeEEEEEe
Confidence            64 112366777777764 8999999999766778877766 465 99999997643 23455554344 6788888876


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      +.+.....+.++++.+.++.+++.++++++|+++++.+|++.+.+++..|+++++
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         319 GGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             cCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence            6554445677788888888877777788999999999999999888778998875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.2e-47  Score=364.91  Aligned_cols=349  Identities=28%  Similarity=0.427  Sum_probs=294.0

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC------
Q 017201           10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE------   82 (375)
Q Consensus        10 ~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~------   82 (375)
                      ||+++.++++.+++++.+.|+|+++||+|||.++++|++|++ ..|..+...+|.++|||++|+|+++|++++.      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            789999988789999999999999999999999999999999 8876653567889999999999999999986      


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc-cEEEcCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-YVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~lp~  161 (375)
                      +++||+|++.+..+|+.|.+|+.+.+++|...++.  |...+.       +.    ....|+|+||++++++ .++++|+
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--~~~~~~-------~~----~~~~g~~a~~~~v~~~~~~~~lP~  148 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--GHEASC-------DD----PHLSGGYAEHIYLPPGTAIVRVPD  148 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhc--cccccc-------cC----CCCCcccceEEEecCCCceEECCC
Confidence            99999999999999999999999999999876542  322110       00    0012599999999996 7999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +++..++++++++++|||+++.+....++|++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.+++
T Consensus       149 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~  228 (361)
T cd08231         149 NVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATID  228 (361)
T ss_pred             CCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEc
Confidence            99999999998999999999876666679999999998999999999999999878999999999999999999999888


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEee
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      .++....++...+++.+++.++|++||++|+...+..++++++++ |+++.+|.... ...+++...++.+++++.++..
T Consensus       229 ~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (361)
T cd08231         229 IDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN  307 (361)
T ss_pred             CcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence            765111223457788888779999999998866889999999998 99999987642 3445666666778999988763


Q ss_pred             ccccCCCCHHHHHHHHHcC--CCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      .   ..+++.++++++.++  .+++.++++++|+++++++|++.+.+++.+|+||.+
T Consensus       308 ~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~  361 (361)
T cd08231         308 Y---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP  361 (361)
T ss_pred             C---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence            3   345788899999888  666677789999999999999999888778999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1e-47  Score=364.39  Aligned_cols=338  Identities=25%  Similarity=0.421  Sum_probs=280.7

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      .++|++.+++++++.+++++.|+|+++||+|||.++++|++|++ +.|.++...+|.++|||++|+|+++|++++++++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G   88 (357)
T PLN02514          9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG   88 (357)
T ss_pred             eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence            49999999999999999999999999999999999999999999 88766545678999999999999999999999999


Q ss_pred             CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      |+|++.+. .+|+.|.+|++|+++.|+...+...+....|             ....|+|+||+.++.+.++++|+++++
T Consensus        89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~~~  155 (357)
T PLN02514         89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDG-------------KPTQGGFASAMVVDQKFVVKIPEGMAP  155 (357)
T ss_pred             CEEEEcCccccCCCChhHhCCCcccCCCccccccccccCC-------------ccCCCccccEEEEchHHeEECCCCCCH
Confidence            99986554 4799999999999999987532100000000             111259999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~  244 (375)
                      ++++++++++.|||+++......++|++|+|+|+|++|++++|+||+.|+ +|+++++++++++.+ +++|++.++++.+
T Consensus       156 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~  234 (357)
T PLN02514        156 EQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD  234 (357)
T ss_pred             HHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC
Confidence            99999999999999987666667899999999889999999999999999 788888887776554 5799988877644


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                         .   ..+.+.+.  ++|++||++|....+..++++++++ |+++.+|... ...+++...++.+++++.++...+  
T Consensus       235 ---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~--  302 (357)
T PLN02514        235 ---A---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN-TPLQFVTPMLMLGRKVITGSFIGS--  302 (357)
T ss_pred             ---h---HHHHHhcC--CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC-CCCcccHHHHhhCCcEEEEEecCC--
Confidence               2   23444443  6999999999766889999999998 9999999775 345677777777999999987543  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                       ..++.++++++.+++++  +++ ++|||+++.+||+.+.+++. +|+||.+
T Consensus       303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence             34688999999999876  445 58999999999999998877 5998864

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=2.5e-47  Score=361.43  Aligned_cols=336  Identities=27%  Similarity=0.443  Sum_probs=291.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-C----------CCCCcccCcceeEEEEEe
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-A----------PLYPRVLGHEGVGVVESA   76 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~----------~~~p~i~G~e~~G~Vv~v   76 (375)
                      |||+++.+++ .++++++|.|+|+++||+||+.++++|++|++ +.+... .          ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~-~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRK-DIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            6899998876 59999999999999999999999999999998 654321 1          136889999999999999


Q ss_pred             CCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccE
Q 017201           77 GDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYV  156 (375)
Q Consensus        77 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  156 (375)
                      |++++.+++||+|++.+..+|+.|.+|.++..+.|.....  +|+..                 ..|+|++|+.++.+.+
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------~~g~~a~~~~~~~~~~  140 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLGG-----------------GGGGFAEYVVVPAYHV  140 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccCC-----------------CCCceeeEEEechHHe
Confidence            9999999999999999999999999999999999986432  12211                 0249999999999999


Q ss_pred             EEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201          157 VKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       157 ~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      +++|+++++++++.+ .++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+
T Consensus       141 ~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga  218 (351)
T cd08233         141 HKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGA  218 (351)
T ss_pred             EECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence            999999999998876 5778999987 77899999999999999999999999999998779999999999999999999


Q ss_pred             cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201          237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK  316 (375)
Q Consensus       237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  316 (375)
                      +.++++++   .++.+.+++.++++++|++||++|+...++.++++++++ |+++.+|... ...++++..+..+++++.
T Consensus       219 ~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~  293 (351)
T cd08233         219 TIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE-KPISFNPNDLVLKEKTLT  293 (351)
T ss_pred             CEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC-CCCccCHHHHHhhCcEEE
Confidence            99999887   678888888888778999999999766889999999997 9999999876 456777777778999999


Q ss_pred             EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccH-HHHHHHHcCCCe--eEEEEe
Q 017201          317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI-DKAIQLLKQPDC--VKVLIT  374 (375)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~--~kvvi~  374 (375)
                      ++...   ...++++++++++++++++.++++++|+++|+ ++|++.+.+++.  +|+||.
T Consensus       294 g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         294 GSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             EEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            87533   24679999999999999887888999999996 799999988775  699874

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.4e-47  Score=362.10  Aligned_cols=359  Identities=42%  Similarity=0.747  Sum_probs=307.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      +||+++.+.+.++++++.+.|++++++|+|++.++++|++|++ +.+..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd   79 (365)
T cd05279           1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD   79 (365)
T ss_pred             CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence            4799999888789999999999999999999999999999999 877654 34678999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      +|++.+..+|+.|.+|+++.+++|+..+... .|...+|+..++-+|...++..+.|+|++|+.++++.++++|++++++
T Consensus        80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~  159 (365)
T cd05279          80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE  159 (365)
T ss_pred             EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence            9999988999999999999999998865421 244445555555555545555566899999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +++.+++++.+||+++...+++++|++|||+|+|++|++++++|+..|+..|+++++++++.++++++|++.+++..+  
T Consensus       160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--  237 (365)
T cd05279         160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD--  237 (365)
T ss_pred             HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc--
Confidence            999999999999998888889999999999988999999999999999956888888999999999999999988766  


Q ss_pred             cc--cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcc-cCCeEEEEEccCC-CccccchHHHhhcCCceEEEEeecc
Q 017201          247 NK--SISELVKGITHGMGVDYCFECTGVPSLLSEALETTK-VGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       247 ~~--~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                       .  ++.+.++++++ .++|++||++|....+..++++++ ++ |+++.+|... .....++...+ .++.++.|+...+
T Consensus       238 -~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~  313 (365)
T cd05279         238 -QDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG  313 (365)
T ss_pred             -ccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence             4  67777888775 589999999987668899999999 87 9999998653 24566777666 5788888887665


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                      +.....+..+++++.++.+++.++++++++++++++|++.+.+++..|++++
T Consensus       314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~  365 (365)
T cd05279         314 WKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT  365 (365)
T ss_pred             CchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            5556778899999999999876678899999999999999988877888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.9e-46  Score=354.80  Aligned_cols=360  Identities=32%  Similarity=0.573  Sum_probs=295.1

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      |+|||+++.++++++++++.+.|+++++||+||+.++++|++|++ ..|.++ ..+|.++|||++|+|+++|+++..+++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            579999999987789999999999999999999999999999999 877654 346889999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcce--ecccccCceeeeEEeecccEEEcCCC
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKL--YHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~--~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      ||+|++.+. .|+.|.+|+.+..++|......- .|...+|+...+..+.+.  .+.++.|+|++|++++++.++++|++
T Consensus        80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            999998764 89999999999999998643210 111112111111000000  01223469999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++++++.+++++.||+.++...+.+++|++|||+|+|++|++++|+|++.|+.+|++++++++|.+.++++|++.++++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~  238 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP  238 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence            99999999999999999988888899999999999889999999999999999679999999999999999999999988


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeec
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      ++   .++.+.+.+++ +.++|+++|++|+...+..++++++++ |+++.+|.... ....++...+..+++++.++...
T Consensus       239 ~~---~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (365)
T cd08278         239 KE---EDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEG  313 (365)
T ss_pred             CC---cCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecC
Confidence            76   67778888877 668999999999766889999999998 99999987632 34567777775688998877643


Q ss_pred             cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                      .....+.+.++++++.++++++.+++ ..++++++++|++.+.+++..|+||+
T Consensus       314 ~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         314 DSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             CcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence            32223456788999999998653444 48999999999999988887899874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=8.1e-47  Score=356.05  Aligned_cols=321  Identities=20%  Similarity=0.228  Sum_probs=254.8

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC----CCCCcccCcceeEEEEEeCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA----PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~----~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ..+|+++++++ .++++++|.|+ +++||+|||.++|||++|++ +.|.++.    ..+|.++|||++|+|+++|.+  .
T Consensus         2 ~~~~~~~~~~~-~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLVRPK-FFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEeccc-eEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            46899999988 49999999995 99999999999999999999 8876532    357999999999999998764  6


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||||++.+..+|+ |.+|.  ..+.|....+  .|...+                  |+|+||+.++++.++++|++
T Consensus        78 ~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~--~g~~~~------------------G~~aey~~v~~~~~~~vP~~  134 (341)
T cd08237          78 YKVGTKVVMVPNTPVE-KDEII--PENYLPSSRF--RSSGYD------------------GFMQDYVFLPPDRLVKLPDN  134 (341)
T ss_pred             cCCCCEEEECCCCCch-hcccc--hhccCCCcce--eEecCC------------------CceEEEEEEchHHeEECCCC
Confidence            9999999998887777 55664  4566865433  133333                  39999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhh--hcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201          163 IDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~Gag~~G~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~lg~~~v  239 (375)
                      +++++||.+. ++++||+++..  .+.+++|++|||+|+|++|++++|+|++ .|+.+|++++++++|++++++++.+..
T Consensus       135 l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~  213 (341)
T cd08237         135 VDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYL  213 (341)
T ss_pred             CChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceee
Confidence            9999887555 78888887643  3457899999999999999999999996 665589999999999999987666533


Q ss_pred             eCCCCCCcccHHHHHHhhcCCCCccEEEEccC---ChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201          240 INPDDEPNKSISELVKGITHGMGVDYCFECTG---VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK  316 (375)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  316 (375)
                      ++       ++       ....++|+|||++|   .+..+..++++++++ |+++.+|... ...++++..++.+++++.
T Consensus       214 ~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~  277 (341)
T cd08237         214 ID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE-YPVPINTRMVLEKGLTLV  277 (341)
T ss_pred             hh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC-CCcccCHHHHhhCceEEE
Confidence            21       11       11226999999999   445789999999998 9999999764 355677777778999999


Q ss_pred             EEeeccccCCCCHHHHHHHHHcC---CCCCCcceeeEeecc---cHHHHHHHHcCCCeeEEEEeC
Q 017201          317 GTTFGGIKTKSDLPTLLDKCKNK---EFKLHQLLTHHVKLE---EIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ++...   ...+++++++++.++   +.++.++++++|+++   ++.++++.+.++..+|+||++
T Consensus       278 g~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~  339 (341)
T cd08237         278 GSSRS---TREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEW  339 (341)
T ss_pred             Eeccc---CHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEe
Confidence            98632   235688999999998   335668899999985   556666655554456999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.2e-47  Score=322.12  Aligned_cols=318  Identities=25%  Similarity=0.304  Sum_probs=273.7

Q ss_pred             CCCccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCC
Q 017201            2 SNSQAITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         2 ~~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      ....|+..|.++.++.|..  +++++.|.|+|.++|++||..|+|+|..|.. .+|-+...+.|+++|.|++|+|+.+|+
T Consensus         2 ~~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~   81 (336)
T KOG1197|consen    2 AAASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGE   81 (336)
T ss_pred             CCCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecC
Confidence            3446778899999887754  8899999999999999999999999999999 899887788999999999999999999


Q ss_pred             CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201           79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK  158 (375)
Q Consensus        79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  158 (375)
                      +|+++++||||+....                                               +|.|+|++.+|...+++
T Consensus        82 gvtdrkvGDrVayl~~-----------------------------------------------~g~yaee~~vP~~kv~~  114 (336)
T KOG1197|consen   82 GVTDRKVGDRVAYLNP-----------------------------------------------FGAYAEEVTVPSVKVFK  114 (336)
T ss_pred             CccccccccEEEEecc-----------------------------------------------chhhheeccccceeecc
Confidence            9999999999984321                                               14899999999999999


Q ss_pred             cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      +|+++++.+||++...+.|||.-+++..+++||++||++.+ |++|++++||++..|+ +++++.++.+|++.+++.|++
T Consensus       115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~  193 (336)
T KOG1197|consen  115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE  193 (336)
T ss_pred             CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence            99999999999999999999998889999999999999966 9999999999999999 999999999999999999999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE-
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK-  316 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~-  316 (375)
                      +.++++.   +|+.+.++++++++|+|+++|++|.+ .+..++.+|++. |+++.+|..++..-+++...+.-|.+++. 
T Consensus       194 h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~ls~k~l~lvr  268 (336)
T KOG1197|consen  194 HPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQLSPKALQLVR  268 (336)
T ss_pred             ceeeccc---hhHHHHHHhccCCCCceeeeccccch-hhHHHHHHhccC-ceEEEeccccCCCCCeehhhcChhhhhhcc
Confidence            9999998   89999999999999999999999998 899999999998 99999998877333333333333444433 


Q ss_pred             EEeeccccCCCCH----HHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          317 GTTFGGIKTKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       317 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      .+.++-...+..+    .++..++.+|.+++.  +.++|||+++.+|+..+++... +|+++.
T Consensus       269 psl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  269 PSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             HhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEe
Confidence            2222211222222    356777889999855  8999999999999999998877 698875

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.7e-45  Score=347.50  Aligned_cols=342  Identities=26%  Similarity=0.383  Sum_probs=285.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.+++ .+++++.+.|.+.++||+|||.++++|++|++ +.+..+...+|.++|||++|+|+++|++++++++||
T Consensus         1 mka~~~~~~~-~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIG-KVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCC-ccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            7899999887 48999999999999999999999999999999 777655456689999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCCc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDP  165 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~~  165 (375)
                      +|++.+..+|+.|..|..|+++.|.....   |+.. +             ....|+|+||+.++.+  .++++|+++++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~---~~~~-~-------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~~  142 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG---GWKF-S-------------NFKDGVFAEYFHVNDADANLAPLPDGLTD  142 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCCC---Cccc-c-------------CCCCcceeEEEEcchhhCceEECCCCCCH
Confidence            99998888999999999999999986421   1110 0             0112499999999974  89999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++++.++..+.|||+++ ..+++++|++|||+|+|++|++++|+|+..|+..|+++++++++.++++++|++.+++..+ 
T Consensus       143 ~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~-  220 (351)
T cd08285         143 EQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN-  220 (351)
T ss_pred             HHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC-
Confidence            99999998999999984 6788999999999988999999999999999966999999999999999999999998876 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchH--HHhhcCCceEEEEeecc
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNV--IALACGGRTLKGTTFGG  322 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~  322 (375)
                        .++.+.+++++.++++|++||++|+...+..++++++++ |+++.+|.... ....++.  +....+..++.+.... 
T Consensus       221 --~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-  296 (351)
T cd08285         221 --GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP-  296 (351)
T ss_pred             --CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC-
Confidence              677788888877778999999999876889999999998 99999987653 2234442  2223355666654321 


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcc-eeeEeecccHHHHHHHHcCCCe--eEEEEeC
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQL-LTHHVKLEEIDKAIQLLKQPDC--VKVLITI  375 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~--~kvvi~~  375 (375)
                       ...+.++++++++.+|++++... ..+.++++++++|++.+.+++.  +|++|++
T Consensus       297 -~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         297 -GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             -CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence             13467899999999999997443 4456999999999999988764  6999975

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=4.7e-45  Score=347.26  Aligned_cols=360  Identities=36%  Similarity=0.636  Sum_probs=300.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++..++.++++++++.|++++++|+|++.++++|+.|++ +.|..+ ..+|.++|+|++|+|+++|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            7999999988889999999999999999999999999999999 877654 35678899999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      +|+..+..+|++|.+|++++.+.|....+..+|...++...+..-|.......+.|+|++|+.++.+.++++|+++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~  159 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR  159 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence            99999999999999999999999987543222322222111111111111123446999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ++.+++++.+||.++....++.+|++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++.+++.+.   
T Consensus       160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---  236 (363)
T cd08279         160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE---  236 (363)
T ss_pred             eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---
Confidence            99999999999998888889999999999988999999999999999955999999999999999999999998876   


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                      .++...++++..+.++|++||++++...+..++++++++ |+++.+|.... ....++...+..++..+.++.+......
T Consensus       237 ~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (363)
T cd08279         237 DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR  315 (363)
T ss_pred             ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcH
Confidence            678888888877678999999999766889999999998 99999986652 3556666666667788787765443345


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI  373 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi  373 (375)
                      ..++.++++++++++++.+++.++++++++.+|++.+.+++..|.||
T Consensus       316 ~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         316 RDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            67888999999999987666788999999999999999888777765

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=4.2e-45  Score=352.54  Aligned_cols=331  Identities=20%  Similarity=0.259  Sum_probs=267.4

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-cc-CCCCC------CCCCcccCcceeEEEEEeCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CS-EGFPA------PLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~-g~~~~------~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      |.|||+++.+++ .++++++|.|+|+++||+|||.++|+|++|++ +. |....      ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~-~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKG-DLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCC-ceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            468999999988 59999999999999999999999999999999 63 43211      24688999999999999999


Q ss_pred             CCC-CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc---
Q 017201           79 EVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN---  154 (375)
Q Consensus        79 ~v~-~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---  154 (375)
                      +|+ .+++||||++.+...|+.|..|. +            +|+..+|                  +|+||++++++   
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~~~G------------------~~aey~~v~~~~~~  128 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYTYPG------------------GLATYHIIPNEVME  128 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------ccccCCC------------------cceEEEEecHHhcc
Confidence            998 59999999999988899888772 1            1222333                  99999999987   


Q ss_pred             -cEEEcCCCCCccccccc-ccc-hhhhhhhh--------hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcC--CCeEEE
Q 017201          155 -YVVKVDPSIDPSDASFL-SCG-FTTGYGAA--------WKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHG--AAKIIG  220 (375)
Q Consensus       155 -~~~~lp~~~~~~~aa~l-~~~-~~ta~~~l--------~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G--~~~V~~  220 (375)
                       .++++|+++++++|+.+ +.+ ..+++.++        .+.+++++|++|+|+|+ |++|++++|+|+++|  +.+|++
T Consensus       129 ~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~  208 (410)
T cd08238         129 QDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVV  208 (410)
T ss_pred             CCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEE
Confidence             68999999999998865 311 11233322        24578999999999985 999999999999975  457999


Q ss_pred             EcCChhhHHHhhhc--------CCc-EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEE
Q 017201          221 IDKNPWKKEKGKAF--------GMT-DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI  291 (375)
Q Consensus       221 ~~~~~~~~~~~~~l--------g~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv  291 (375)
                      ++++++|+++++++        |++ .++++.+  ..++.+.+++++++.++|++||++|+.+.++.++++++++ |+++
T Consensus       209 ~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v  285 (410)
T cd08238         209 TDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLN  285 (410)
T ss_pred             EcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEE
Confidence            99999999999987        766 4676643  1467788888888889999999999877899999999997 8877


Q ss_pred             EEccC-CC-ccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee
Q 017201          292 VIGVG-VD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV  369 (375)
Q Consensus       292 ~~g~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  369 (375)
                      .++.. .. ...+++...++.+++++.|+...   ...+++++++++.+|++++.++++++|||+++++|++.+..+..+
T Consensus       286 ~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~g  362 (410)
T cd08238         286 FFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGG  362 (410)
T ss_pred             EEEccCCCCccccccHHHhhhcCcEEEEeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCc
Confidence            76433 21 23567777788899999997633   235789999999999999988999999999999999999844446


Q ss_pred             EEEEeC
Q 017201          370 KVLITI  375 (375)
Q Consensus       370 kvvi~~  375 (375)
                      |+||.+
T Consensus       363 Kvvl~~  368 (410)
T cd08238         363 KKLIYT  368 (410)
T ss_pred             eEEEEC
Confidence            999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-44  Score=340.34  Aligned_cols=333  Identities=23%  Similarity=0.368  Sum_probs=278.8

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.+++ .++++++|.|+|+++|++||+.++++|++|++ +.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPN-SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCC-eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            6899999887 59999999999999999999999999999999 887765556789999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      +|++.+..+|+.|++|++++++.|......  ++..+                  |+|+||+.++.+.++++|+++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~  139 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL--GVHRD------------------GGFSEYAVVPAKNAHRIPDAIADQY  139 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCceE--EEccC------------------CcceeeEEechHHeEECcCCCCHHH
Confidence            999999999999999999999999754321  22222                  4999999999999999999999988


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      ++ +...+.++++ +...+++++|++|||+|+|++|++++|+|+. +|+..|++++++++|.++++++|++.+++.++  
T Consensus       140 a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--  215 (339)
T PRK10083        140 AV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--  215 (339)
T ss_pred             Hh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--
Confidence            76 4457788885 5677899999999999999999999999996 59966888989999999999999999998776  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                       .++.+.+..  .+.++|++||++|++..+..++++++++ |+++.+|.... ...++...+..+++++.++..    ..
T Consensus       216 -~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----~~  286 (339)
T PRK10083        216 -EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL----NA  286 (339)
T ss_pred             -ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CceecHHHHhhcceEEEEEec----Ch
Confidence             556665543  2335679999999766889999999998 99999987653 334445455557777776542    24


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC-e-eEEEEeC
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLITI  375 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvi~~  375 (375)
                      ..+.+++++++++++++.+++++.|+++++++|++.+.++. . .|+|+.+
T Consensus       287 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        287 NKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence            57889999999999987656788999999999999997543 3 6999863

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.7e-44  Score=339.60  Aligned_cols=330  Identities=25%  Similarity=0.409  Sum_probs=284.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++..++.+++++++|.|+++++||+||+.++++|++|++ +.|..+...+|.++|||++|+|+++|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            7999999986679999999999999999999999999999999 877654445688999999999999999999999999


Q ss_pred             EEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           88 IVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        88 ~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      +|++.+ ...|+.|.+|..|.++.|......  |+..+                  |+|++|+.++.+.++++|+++++.
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~--~~~~~------------------g~~a~~~~v~~~~~~~lp~~~~~~  140 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT--GVTRD------------------GGYAEYMLAPAEALARIPDDLDAA  140 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCcc--CcccC------------------CcceeEEEEchhheEeCCCCCCHH
Confidence            998754 578999999999999999976542  33223                  499999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +++.+++++.+||+++. ..++++|++|||+|+|++|++++++|+.+|+ +|++++++++++++++++|++.++++.+  
T Consensus       141 ~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--  216 (333)
T cd08296         141 EAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--  216 (333)
T ss_pred             HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--
Confidence            99999999999999874 4589999999999999999999999999999 8999999999999999999999998876  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                       .++.+.++++   .++|++||+.|....+..++++++++ |+++.+|... ...+++...++.+++++.++...   ..
T Consensus       217 -~~~~~~~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~---~~  287 (333)
T cd08296         217 -EDVAEALQEL---GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSG---TA  287 (333)
T ss_pred             -ccHHHHHHhc---CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcC---CH
Confidence             5677777665   26999999997666889999999998 9999999775 35566666667799999997633   23


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      .++..+++++.++++++  ++ +.++++++.+||+.+.+++. +|+||+
T Consensus       288 ~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         288 LDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            46778888888888763  34 58999999999999988877 598874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=9.6e-44  Score=336.09  Aligned_cols=338  Identities=31%  Similarity=0.456  Sum_probs=290.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++..++. +++++++.|+| .++||+|++.++++|++|++ +.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            68999988874 99999999986 89999999999999999999 88876555568899999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID  164 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~  164 (375)
                      |+|++.+...|++|.+|..++.+.|....+. .|...+                  |+|++|+.++.+  .++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------g~~~~~~~v~~~~~~~~~lp~~~~  140 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNLID------------------GTQAEYVRIPHADNSLYKLPEGVD  140 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccccC------------------CeeeeEEEcccccCceEECCCCCC
Confidence            9999999999999999999999999864321 122222                  499999999987  8999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      ..+++.+++.+.+||.++....++++|++|||+|+|++|++++|+|+..|..+|++++++++|.++++++|++.++++.+
T Consensus       141 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~  220 (345)
T cd08286         141 EEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK  220 (345)
T ss_pred             HHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc
Confidence            99999999999999987777788999999999988999999999999999448999999999999999999999998876


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                         .++.+.+.+++++.++|++||+++....++.++++++++ |+++.+|... ....+++..++.+++++.+....   
T Consensus       221 ---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~---  292 (345)
T cd08286         221 ---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG-KPVDLHLEKLWIKNITITTGLVD---  292 (345)
T ss_pred             ---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC-CCCCcCHHHHhhcCcEEEeecCc---
Confidence               567778888887778999999998776888999999998 9999998664 34566776666689998875321   


Q ss_pred             CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC---CeeEEEEeC
Q 017201          325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP---DCVKVLITI  375 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~kvvi~~  375 (375)
                       ...+..++++++++.+++.+++++++++++++++++.+.+.   ...|+||++
T Consensus       293 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 -TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             -hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence             24678889999999998766678899999999999999876   346999975

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.3e-44  Score=336.41  Aligned_cols=302  Identities=21%  Similarity=0.326  Sum_probs=242.8

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecC-CCccc-ccCCCCC---CCCCcccCcceeEEEEEeCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVC-HTDIL-CSEGFPA---PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~-~~D~~-~~g~~~~---~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ++||+++.+++ .+++++.|.|+|+++||+|||.+++|| ++|++ +.|..+.   ..+|.++|||++|+|+++|+++ .
T Consensus         1 ~~ka~~~~~~~-~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPN-QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCC-eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            47899998887 599999999999999999999999996 79998 8776543   3579999999999999999998 5


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||||++.+    ..|..|..              |  .                  .|+|+||+.++++.++++|++
T Consensus        79 ~~vGdrV~~~~----~~c~~~~~--------------~--~------------------~G~~aey~~v~~~~~~~ip~~  120 (308)
T TIGR01202        79 FRPGDRVFVPG----SNCYEDVR--------------G--L------------------FGGASKRLVTPASRVCRLDPA  120 (308)
T ss_pred             CCCCCEEEEeC----cccccccc--------------c--c------------------CCcccceEEcCHHHceeCCCC
Confidence            99999998632    22333211              0  0                  149999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      ++++. +.++ .+.|||+++.+ . ..++++|||+|+|++|++++|+||++|++.|++++.+++|++.++++   .++|+
T Consensus       121 ~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~  193 (308)
T TIGR01202       121 LGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDP  193 (308)
T ss_pred             CCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccCh
Confidence            98864 4454 57899998743 3 34689999999999999999999999996677778777887766543   34444


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      .+    +         .+.++|+|||++|+...++.++++++++ |+++.+|.+. ....++...++.|++++.++... 
T Consensus       194 ~~----~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~~~~~~-  257 (308)
T TIGR01202       194 EK----D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYT-EPVNFDFVPAFMKEARLRIAAEW-  257 (308)
T ss_pred             hh----c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecC-CCcccccchhhhcceEEEEeccc-
Confidence            32    1         2347999999999987789999999998 9999999865 34566666677788998876532 


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                        ..+++++++++++++++++.++++++|||+|+++|++.+.+++. +|++|+
T Consensus       258 --~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       258 --QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             --chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence              24578999999999999998889999999999999998876544 799874

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.3e-43  Score=339.66  Aligned_cols=353  Identities=29%  Similarity=0.429  Sum_probs=288.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+++ .+++++++.|.| ++++|+||+.++++|++|++ +.|.++..++|.++|||++|+|+++|++++.+++|
T Consensus         1 m~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKG-DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCC-CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            7899999875 599999999988 59999999999999999999 88877655678999999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCccccccccccc-----ccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIAL-----NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKV  159 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-----~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~l  159 (375)
                      |+|++.+..+|+.|++|..+.+++|.......     +|....+     ..|.........|+|++|+.++.+  .++++
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l  154 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG-----IFGYSHLTGGYAGGQAEYVRVPFADVGPFKI  154 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccc-----ccccccccCCCCCeeEEEEEcccccCeEEEC
Confidence            99999988899999999999999998644321     0111000     000000000013699999999987  89999


Q ss_pred             CCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201          160 DPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       160 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v  239 (375)
                      |+++++++|++++..+.|||+++ ..+++++|++|||+|+|++|++++++|++.|+.+|+++++++++.+++++++...+
T Consensus       155 p~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v  233 (386)
T cd08283         155 PDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET  233 (386)
T ss_pred             CCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE
Confidence            99999999999999999999987 78899999999999889999999999999998569999999999999999844467


Q ss_pred             eCCCCCCcc-cHHHHHHhhcCCCCccEEEEccCCh---------------------hhHHHHHHhcccCCeEEEEEccCC
Q 017201          240 INPDDEPNK-SISELVKGITHGMGVDYCFECTGVP---------------------SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       240 ~~~~~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++..+   . ++.+.++++++++++|++||++|+.                     ..+..++++++++ |+++.+|...
T Consensus       234 i~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~  309 (386)
T cd08283         234 INFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYG  309 (386)
T ss_pred             EcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCC
Confidence            77665   4 4788888888877899999999752                     3678899999998 9999998765


Q ss_pred             CccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEeC
Q 017201          298 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLITI  375 (375)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~~  375 (375)
                      .....++...++.+++++.+....   ..+.+.++++++.++++.+.+++.+.++++++.+|++.+.+++  .+|+||+.
T Consensus       310 ~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         310 GTVNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             CCcCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            433455665566689998886422   2456888999999999987666778999999999999998776  36999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.8e-43  Score=333.54  Aligned_cols=333  Identities=27%  Similarity=0.429  Sum_probs=288.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++.++++++++++.+.|++.+++|+|++.++++|++|++ ..|.++   ...+|.++|+|++|+|+++|+++..++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            6899999887789999999999999999999999999999999 777654   245688999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+...|+.|..|+.|..++|...++.  |+..+                  |+|++|+.++++.++++|++++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~~P~~ls  140 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP--GIGTD------------------GGFAEYLLVPSRRLVKLPRGLD  140 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc--CccCC------------------CcceeeEEecHHHeEECCCCCC
Confidence            999999999999999999999999999987763  44333                  3999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++++.+++.+.|||+++... ..+.+|++|||+|+|++|++++++|+..| . +|+++++++++.+.++++|+++++++
T Consensus       141 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~  219 (340)
T cd05284         141 PVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNA  219 (340)
T ss_pred             HHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence            999999999999999987665 46889999999999889999999999999 6 89999999999999999999999988


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      ++   . +.+.+++++++.++|+++|++|+...+..++++++++ |+++.+|....  ..++....+.+++++.++... 
T Consensus       220 ~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~-  291 (340)
T cd05284         220 SD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG-  291 (340)
T ss_pred             Cc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC--CccCHHHhhhcceEEEEEecc-
Confidence            76   4 7778888887778999999999866889999999998 99999986652  444555545688998887533 


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                        ....+..++++++++.+++   ..+.|+++++++|++.+++++. .|+|+.+
T Consensus       292 --~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         292 --TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             --cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence              2456888999999999874   3457999999999999998877 5888764

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-43  Score=333.23  Aligned_cols=335  Identities=27%  Similarity=0.423  Sum_probs=281.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC---------CCCCcccCcceeEEEEEeCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA---------PLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~---------~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      |||+++.+++ .+++++.+.|++.+++|+||+.++++|++|++ +.|....         ..+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~-~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQ-DYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCC-ceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            6899999887 49999999999999999999999999999998 7775311         14677899999999999999


Q ss_pred             CCC--CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc-c
Q 017201           79 EVK--EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-Y  155 (375)
Q Consensus        79 ~v~--~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~  155 (375)
                      +++  .+++||+|+..+..+|+.|+.|.++++.+|.+...  +|+...                ..|+|++|+.++++ .
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~----------------~~g~~~~~~~~~~~~~  141 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL--YGFQNN----------------VNGGMAEYMRFPKEAI  141 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc--eeeccC----------------CCCcceeeEEcccccc
Confidence            998  89999999999999999999999999999976432  233110                12499999999988 6


Q ss_pred             EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201          156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      ++++|+++++++++.+ .+++|+|.++ +.+++++|++|||.|+|++|++++++|+++|+..|+++++++++.++++++|
T Consensus       142 ~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g  219 (350)
T cd08256         142 VHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFG  219 (350)
T ss_pred             eEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcC
Confidence            7899999999999988 7899999987 7789999999999777999999999999999867888999999999999999


Q ss_pred             CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHh-hcCCce
Q 017201          236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL-ACGGRT  314 (375)
Q Consensus       236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~  314 (375)
                      ++.+++..+   .++.+.+.+++++.++|++||++|+...+..++++++++ |+++.+|.... ...++...+ ..++++
T Consensus       220 ~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~  294 (350)
T cd08256         220 ADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGD-PVTVDWSIIGDRKELD  294 (350)
T ss_pred             CcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCC-CCccChhHhhcccccE
Confidence            998888776   678888888888778999999999755788999999998 99999986542 333444333 246777


Q ss_pred             EEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          315 LKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      +.++...    ...+.+++++++++.+++.+++.+.|+++++++|++.+++++. .|+|+
T Consensus       295 i~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         295 VLGSHLG----PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EEEeccC----chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            7776533    2467889999999999876557889999999999999988776 48774

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.6e-43  Score=340.33  Aligned_cols=343  Identities=18%  Similarity=0.178  Sum_probs=284.2

Q ss_pred             ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC----------CCCCCcccCcc
Q 017201            5 QAITCKAVVCWG--LG---EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP----------APLYPRVLGHE   68 (375)
Q Consensus         5 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~----------~~~~p~i~G~e   68 (375)
                      .|.+|+|+++..  .+   +.++++++|.|+++++||+|++.++++|++|++ ..+...          ....+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            577899999863  22   248899999999999999999999999999998 766411          01123588999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeee
Q 017201           69 GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY  148 (375)
Q Consensus        69 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~  148 (375)
                      ++|+|+++|++++.+++||+|++.+...|+.|..|.++.+++|.....  +|+..                 ..|+|++|
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~-----------------~~g~~a~y  149 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYET-----------------NYGSFAQF  149 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--ccccC-----------------CCCcceeE
Confidence            999999999999999999999999999999999999999999986544  24321                 12499999


Q ss_pred             EEeecccEEEcCCCCCcccccccccchhhhhhhhhhh--cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          149 MVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       149 ~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ++++...++++|+++++++++.+++++.|||+++...  +++++|++|||+|+ |++|++++++|+..|+ +++++++++
T Consensus       150 ~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~  228 (393)
T cd08246         150 ALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSE  228 (393)
T ss_pred             EEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCH
Confidence            9999999999999999999999999999999987654  68999999999998 9999999999999999 788889999


Q ss_pred             hhHHHhhhcCCcEEeCCCCCC-------------------cccHHHHHHhhcCCC-CccEEEEccCChhhHHHHHHhccc
Q 017201          226 WKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGM-GVDYCFECTGVPSLLSEALETTKV  285 (375)
Q Consensus       226 ~~~~~~~~lg~~~v~~~~~~~-------------------~~~~~~~i~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~  285 (375)
                      ++.++++++|++.+++.++.+                   ...+.+.+++++++. ++|++||++|+. .+..+++++++
T Consensus       229 ~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~  307 (393)
T cd08246         229 EKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDR  307 (393)
T ss_pred             HHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhcc
Confidence            999999999999988864310                   013567788888887 899999999975 78999999999


Q ss_pred             CCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC
Q 017201          286 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  365 (375)
Q Consensus       286 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  365 (375)
                      + |+++.+|........++...++.++.++.+++...   .+.+.+++++++++.+++  .++++|+++++++|++.+.+
T Consensus       308 ~-G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~  381 (393)
T cd08246         308 G-GMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHR  381 (393)
T ss_pred             C-CEEEEEcccCCCCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHh
Confidence            7 99999987653334566666767888888875432   346888999999998874  46789999999999999988


Q ss_pred             C-Ce-eEEEEe
Q 017201          366 P-DC-VKVLIT  374 (375)
Q Consensus       366 ~-~~-~kvvi~  374 (375)
                      + +. .|+|+-
T Consensus       382 ~~~~~gkvvv~  392 (393)
T cd08246         382 NQHHVGNMAVL  392 (393)
T ss_pred             CccccceEEEe
Confidence            7 55 588763

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=4.4e-43  Score=331.71  Aligned_cols=340  Identities=31%  Similarity=0.445  Sum_probs=284.8

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+++. +.+++.|.|.| .++||+||+.++++|++|++ +.|.++...+|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            68999988774 89999999999 89999999999999999999 88877656678999999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID  164 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~  164 (375)
                      |+|+..+..+|+.|.+|.++...+|.......+    .+             ....|+|++|++++++  .++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------------~~~~g~~~~~~~v~~~~~~~~~lP~~~~  142 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWK----LG-------------NRIDGGQAEYVRVPYADMNLAKIPDGLP  142 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccc----cc-------------cCCCCeeeEEEEecchhCeEEECCCCCC
Confidence            999999999999999999999999987442110    00             1123599999999987  9999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      .++++.+++++.|||+++ ...++++|++|||.|+|++|++++|+|+..|..+|+++++++++.++++++|++.+++.++
T Consensus       143 ~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~  221 (347)
T cd05278         143 DEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN  221 (347)
T ss_pred             HHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc
Confidence            999999999999999987 6788999999999888999999999999999657888888889999999999999998876


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc-ccchHHHhhcCCceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM-VPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                         .++.+.+++.+++.++|++||++++...+..++++++++ |+++.+|...... ..... ..+.+++++.++...  
T Consensus       222 ---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~--  294 (347)
T cd05278         222 ---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLG-EWFGKNLTFKTGLVP--  294 (347)
T ss_pred             ---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccc-hhhhceeEEEeeccC--
Confidence               567788888877778999999998855889999999998 9999998654321 11122 223477777765422  


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe--eEEEEeC
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC--VKVLITI  375 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvi~~  375 (375)
                       ....+.++++++.++.+++.+++...+++++++++++.+..++.  .|+|++.
T Consensus       295 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         295 -VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             -chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence             24578889999999999866556788999999999999987765  4888863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=7.5e-43  Score=330.63  Aligned_cols=336  Identities=28%  Similarity=0.389  Sum_probs=285.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC------------CCCCCcccCcceeEEEEE
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP------------APLYPRVLGHEGVGVVES   75 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~------------~~~~p~i~G~e~~G~Vv~   75 (375)
                      |||+++..++.+++++++|.|+++++||+||+.++++|++|++ +.|.++            ...+|.++|||++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            7899999888889999999999999999999999999999999 777543            124567899999999999


Q ss_pred             eCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201           76 AGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY  155 (375)
Q Consensus        76 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  155 (375)
                      +|++++.+++||+|+..+...|+.|..|.++.+++|.+..+.  |...                  .|+|++|+.++.+.
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------------~g~~~~~~~~~~~~  140 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIFQ------------------DGGYAEYVIVPHSR  140 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eeec------------------cCcceeeEEecHHH
Confidence            999999999999999999999999999999999999774321  2222                  24999999999999


Q ss_pred             EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201          156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      ++++|+++++.+++.+++.+.|||+++......+++++|||+|+|++|++++|+|+..|+++|+++++++++.+.++++|
T Consensus       141 ~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g  220 (350)
T cd08240         141 YLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAG  220 (350)
T ss_pred             eeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence            99999999999999999999999998876666679999999988999999999999999977899999999999999999


Q ss_pred             CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceE
Q 017201          236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTL  315 (375)
Q Consensus       236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  315 (375)
                      ++.+++.++   .++.+.+.++.++ ++|++||++|....+..++++++++ |+++.+|.... ....+...+..+++++
T Consensus       221 ~~~~~~~~~---~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~i  294 (350)
T cd08240         221 ADVVVNGSD---PDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGG-EATLPLPLLPLRALTI  294 (350)
T ss_pred             CcEEecCCC---ccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCC-CCcccHHHHhhcCcEE
Confidence            988888766   5677777777777 8999999999766889999999998 99999987653 2233344444588888


Q ss_pred             EEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          316 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .++....   .+++..++++++++.+++.  ....+++++++++++.+.+++. .|+++.+
T Consensus       295 ~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         295 QGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             EEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            8765332   2567889999999998753  5668999999999999987766 5988763

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=3.7e-42  Score=324.74  Aligned_cols=336  Identities=24%  Similarity=0.346  Sum_probs=278.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      ||++++.++++.+++++.|.|+|+++||+||+.++++|++|++ +.+..   ....+|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            6899998888889999999999999999999999999999998 66532   1234678899999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+..+|+.|.+|+.+.+++|++.+..  +...+                  |+|++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~iP~~l~  140 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV--GVNRP------------------GAFAEYLVIPAFNVWKIPDDIP  140 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCccee--eecCC------------------CcceeeEEechHHeEECcCCCC
Confidence            999999999999999999999999999875432  32233                  4999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +.+++.+ ..+.++++++..  ...+|++|+|+|+|++|++++|+|++.|+++|+++++++++.++++++|++.+++.++
T Consensus       141 ~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~  217 (341)
T PRK05396        141 DDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK  217 (341)
T ss_pred             HHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence            9888754 455666655432  3468999999988999999999999999866888888899999999999999998876


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                         .++.+.++++++++++|++||+.|+...++.++++++++ |+++.+|.... ...++...+..+++++.++...  .
T Consensus       218 ---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~--~  290 (341)
T PRK05396        218 ---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIYGR--E  290 (341)
T ss_pred             ---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC-CCcccHHHHhhcceEEEEEEcc--C
Confidence               678888888887779999999999877889999999998 99999987653 3344456666788888776421  1


Q ss_pred             CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ....+..+++++.++ +++.+++.+.++++++++|++.+.+++.+|+|+++
T Consensus       291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~  340 (341)
T PRK05396        291 MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDW  340 (341)
T ss_pred             ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEec
Confidence            123456688888888 54445577899999999999999877656999863

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.6e-42  Score=327.98  Aligned_cols=357  Identities=31%  Similarity=0.488  Sum_probs=292.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC---CC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE---VK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~---~~   84 (375)
                      |||+++..++.++++++.|+|.++++||+|++.++++|++|++ ..+.++. .+|.++|||++|+|+.+|+++.+   ++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            6899999988789999999999999999999999999999999 7776543 56789999999999999999988   99


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccc-cc-cccCCCcccccccCcceec--ccccCceeeeEEeecccEEEcC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LN-GLMLDSTSRMSVRGQKLYH--IFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~-g~~~~g~~~~~~~~~~~~~--~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      +||+|+..+..+|+.|.+|+.+.+++|++...+ +. |-..+|...+...  -.++  ....|+|++|+.++.+.++++|
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~P  157 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRL--DGGPVYMYSMGGLAEYAVVPATALAPLP  157 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCccccccc--CCCccccccCCcceeEEEechhhEEECC
Confidence            999999988899999999999999999975421 00 0000000000000  0000  0123599999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      +++++.+++.+++++.|||+++.+...+.++++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++.++
T Consensus       158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~  237 (367)
T cd08263         158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV  237 (367)
T ss_pred             CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEe
Confidence            99999999999999999999987778889999999998899999999999999994499998899999999999999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEe
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      +.++   .++.+.+++..++.++|++||++++...+..++++++++ |+++.++.... ....++...++.+++++.++.
T Consensus       238 ~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (367)
T cd08263         238 NAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY  313 (367)
T ss_pred             cCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence            8876   678888888877778999999999865788999999998 99999986643 344566666656888877743


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      .  ....+.+..+++++.++.+++.+.+++.++++++.++++.+.+++. +|+||+
T Consensus       314 ~--~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         314 G--ARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             C--CCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            1  1123467889999999999876667889999999999999988876 588874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.3e-42  Score=325.64  Aligned_cols=309  Identities=21%  Similarity=0.223  Sum_probs=257.2

Q ss_pred             eeEEEEecCCC-----CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 017201            9 CKAVVCWGLGE-----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         9 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      |||+++.+++.     .++++++|.|+|+++||+||+.++++|++|++ +.|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            68999998875     47888999999999999999999999999999 8776543 45789999999999999999998


Q ss_pred             C-CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           82 E-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        82 ~-~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      + +++||+|++.+..                            +                  |+|+||+.++++.++++|
T Consensus        81 ~~~~vGd~V~~~~~~----------------------------~------------------g~~a~~~~v~~~~~~~iP  114 (324)
T cd08291          81 AQSLIGKRVAFLAGS----------------------------Y------------------GTYAEYAVADAQQCLPLP  114 (324)
T ss_pred             ccCCCCCEEEecCCC----------------------------C------------------CcchheeeecHHHeEECC
Confidence            6 9999999853210                            1                  399999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-GL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      +++++++++++++.+.|||.. ....+. ++++++|+ |+ |++|++++|+|+.+|+ +|++++++++++++++++|++.
T Consensus       115 ~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~  191 (324)
T cd08291         115 DGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEY  191 (324)
T ss_pred             CCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcE
Confidence            999999999888888999754 455555 56666665 55 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccc-cchHHHhhcCCceEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV-PLNVIALACGGRTLKG  317 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~~~~~  317 (375)
                      ++++.+   .++.+.+++++.++++|++||++|+. ....++.+++++ |+++.+|....... .++...++.+++++.+
T Consensus       192 ~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08291         192 VLNSSD---PDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG  266 (324)
T ss_pred             EEECCC---ccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence            998876   67888898888877899999999987 567889999997 99999997643222 3556666779999998


Q ss_pred             EeeccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          318 TTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       318 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      +....+..   .+.+.+++++++ ++++  +.++++|+|+++.+|++.+.+++. +|++|.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         267 FWLTTWLQKLGPEVVKKLKKLVK-TELK--TTFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             EEHHHhhcccCHHHHHHHHHHHh-Cccc--cceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            87654322   234677788887 7766  568899999999999999988766 699874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=7e-42  Score=323.17  Aligned_cols=339  Identities=30%  Similarity=0.423  Sum_probs=282.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCC-CCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPK-STEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~-~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++..++ .++++++++|.|. ++||+|++.++++|+.|++ ..|.++ ..+|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            6899998775 6999999999985 9999999999999999999 777654 3457889999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID  164 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~  164 (375)
                      |+|++.+..+|+.|.+|++++...|++.-.  +|..  +            .....|+|++|++++.+  .++++|++++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~l~  142 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL--FGYA--G------------SPNLDGAQAEYVRVPFADGTLLKLPDGLS  142 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCcc--cccc--c------------cCCCCCceeEEEEcccccCceEECCCCCC
Confidence            999998989999999999999999976422  1110  0            00012589999999865  9999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +++++.++++++|||+++. ..++.+|++|||+|+|++|++++++|+..|+.+|+++++++++.+.++++|+. .++.+.
T Consensus       143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~  220 (344)
T cd08284         143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED  220 (344)
T ss_pred             HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC
Confidence            9999999999999999875 57899999999998899999999999999965799998889999999999986 455554


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                         .++...++++++++++|++||++++...+..++++++++ |+++.+|.........+....+.+++++.+..   ..
T Consensus       221 ---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~  293 (344)
T cd08284         221 ---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CP  293 (344)
T ss_pred             ---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CC
Confidence               567788888888778999999999766889999999997 99999997754333445555566888877542   12


Q ss_pred             CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                      ....+..+++++.++++++.+++.+.+++++++++++.+.+++..|+|++
T Consensus       294 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~  343 (344)
T cd08284         294 VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD  343 (344)
T ss_pred             cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence            35678899999999999875557789999999999999887666898875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.6e-42  Score=324.03  Aligned_cols=338  Identities=25%  Similarity=0.398  Sum_probs=289.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++..++.++++++.+.|.+.+++|+||+.++++|++|+. ..|..+...+|.++|+|++|+|+.+|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            7999999888789999999999999999999999999999999 877765556688999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCCc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDP  165 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~~  165 (375)
                      +|+..+..+|++|++|+.|..+.|++...  .|+..+                  |+|++|+.++..  .++++|++++.
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~~~iP~~~~~  140 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFTHP------------------GSFAEYVAVPRADVNLVRLPDDVDF  140 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcc--cccCCC------------------CcceeEEEcccccCceEECCCCCCH
Confidence            99987778899999999999999997532  122223                  499999999974  89999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++++.++..+.|||+++....++.++++|+|+|+|++|++++++|+..|+ +|+++++++++.+.++++|++.+++.++ 
T Consensus       141 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-  218 (345)
T cd08260         141 VTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-  218 (345)
T ss_pred             HHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-
Confidence            99999999999999988777889999999999999999999999999999 8999999999999999999999988753 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc--ccchHHHhhcCCceEEEEeeccc
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM--VPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                       ..++.+.+.++..+ ++|++||++|+...+..++++++++ |+++.+|......  ..++...+..+++++.+....  
T Consensus       219 -~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  293 (345)
T cd08260         219 -VEDVAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM--  293 (345)
T ss_pred             -chhHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence             14677778777777 8999999998766888999999998 9999998765321  456666666688888886532  


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                       ....++.++++++++++.+.+.+.+.++++++++|++.+.+++. +|+|++
T Consensus       294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence             34578889999999998866556789999999999999988776 588874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=3.7e-42  Score=331.07  Aligned_cols=344  Identities=19%  Similarity=0.210  Sum_probs=283.1

Q ss_pred             ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC----------CCCCC-cccCc
Q 017201            5 QAITCKAVVCWG--LG---EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP----------APLYP-RVLGH   67 (375)
Q Consensus         5 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~----------~~~~p-~i~G~   67 (375)
                      .|.+|||+++..  ++   +.+++++.|.|.|.++||+||+.++++|++|++ ..+...          ....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            456899999964  44   349999999999999999999999999999987 554321          11223 37999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceee
Q 017201           68 EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSE  147 (375)
Q Consensus        68 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~  147 (375)
                      |++|+|+++|++++.+++||+|++.+...|+.|+.|+.+++++|+....+  |+..                 ..|+|++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~-----------------~~g~~ae  144 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW--GYET-----------------NFGSFAE  144 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc--cccC-----------------CCccceE
Confidence            99999999999999999999999999999999999999999999765432  2211                 1249999


Q ss_pred             eEEeecccEEEcCCCCCcccccccccchhhhhhhhhh--hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          148 YMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       148 ~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      |+.++.+.++++|+++++++++.+++.+.+||+++..  .+++.+|++|||+|+ |++|++++++|+++|+ ++++++++
T Consensus       145 ~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~  223 (398)
T TIGR01751       145 FALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSS  223 (398)
T ss_pred             EEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCC
Confidence            9999999999999999999999999999999998754  477899999999998 9999999999999999 78888889


Q ss_pred             hhhHHHhhhcCCcEEeCCCCCC-------------------cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhccc
Q 017201          225 PWKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  285 (375)
Q Consensus       225 ~~~~~~~~~lg~~~v~~~~~~~-------------------~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~  285 (375)
                      +++.+.++++|++.++|+.+++                   ...+.+.+.++++++++|++||++|.. .+..+++++++
T Consensus       224 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~  302 (398)
T TIGR01751       224 PEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRR  302 (398)
T ss_pred             HHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhcc
Confidence            9999999999999999875410                   012556677788777899999999975 78999999999


Q ss_pred             CCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC
Q 017201          286 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  365 (375)
Q Consensus       286 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  365 (375)
                      + |+++.+|........++...++.++.++.++.+..   ..++++++++++++++.+  .+++++++++++++++.+.+
T Consensus       303 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~  376 (398)
T TIGR01751       303 G-GMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHR  376 (398)
T ss_pred             C-CEEEEEccccCCCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHc
Confidence            8 99999997754345566666666788887765432   234778999999999874  37789999999999999987


Q ss_pred             CCe-eEEEEeC
Q 017201          366 PDC-VKVLITI  375 (375)
Q Consensus       366 ~~~-~kvvi~~  375 (375)
                      ++. .|+|+.+
T Consensus       377 ~~~~gkvvv~~  387 (398)
T TIGR01751       377 NHHQGNVAVLV  387 (398)
T ss_pred             CCCCceEEEEe
Confidence            776 5888763

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.5e-41  Score=321.17  Aligned_cols=335  Identities=30%  Similarity=0.444  Sum_probs=280.8

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||++++.++ .+++++.|.|.| +++||+||+.++++|++|++ +.|..+. ..|.++|||++|+|+++|+++..+++|
T Consensus         1 m~~~~~~~~~-~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPG-DIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCC-ceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence            6899998877 499999999986 89999999999999999999 8776542 457899999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCCC
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSID  164 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~~  164 (375)
                      |+|++....+|+.|..|..++.+.|.....+  |...+|                  +|++|+.++.+  .++++|++++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------------~~~~~~~v~~~~~~~~~lP~~l~  138 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW--GAFVDG------------------GQGEYVRVPLADGTLVKVPGSPS  138 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCcc--cCCCCC------------------ceEEEEEcchhhCceEECCCCCC
Confidence            9998866788999999999999999864332  333333                  99999999875  9999999998


Q ss_pred             ccccc-----ccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201          165 PSDAS-----FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       165 ~~~aa-----~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v  239 (375)
                      ++.+.     ++...+.+|++++ ..+++++|++|+|+|+|++|++++|+|++.|+..++++++++++.++++++|++.+
T Consensus       139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v  217 (345)
T cd08287         139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI  217 (345)
T ss_pred             hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence            83221     2225678888876 47789999999999889999999999999999668999988889999999999999


Q ss_pred             eCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201          240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      +++.+   .++.+.+.+++++.++|+++|++|+...+..++++++++ |+++.+|.... ...++....+.+++++.+..
T Consensus       218 ~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~  292 (345)
T cd08287         218 VAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG-GVELDVRELFFRNVGLAGGP  292 (345)
T ss_pred             ecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC-CCccCHHHHHhcceEEEEec
Confidence            99876   678888888888779999999998877899999999997 99999987652 44556544456899988753


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                      ..   ....+.++++++.++++++.+++.+.+++++++++++.+.+++..|++|+
T Consensus       293 ~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~  344 (345)
T cd08287         293 AP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR  344 (345)
T ss_pred             CC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence            22   23578889999999999876667789999999999999988777899986

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-41  Score=318.95  Aligned_cols=334  Identities=29%  Similarity=0.497  Sum_probs=284.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++..++ .+++++.++|++.++||+|+|.++++|+.|+. ..+..+...+|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPG-RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCC-ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            6899998886 59999999999999999999999999999999 777665555688999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      +|+..+..+|+.|..|+.++.+.|...+..  ++..                  .|+|++|++++++ ++++|+++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------------~g~~~~~v~v~~~-~~~~p~~~~~~~  138 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQVL--GVHR------------------DGGFAEYIVVPAD-ALLVPEGLSLDQ  138 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCee--eecC------------------CCcceeEEEechh-eEECCCCCCHHH
Confidence            999988889999999999999999643221  1111                  2499999999999 999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ++++ ..+.++++++ ...++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|+++++++.+   
T Consensus       139 aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~---  212 (337)
T cd08261         139 AALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD---  212 (337)
T ss_pred             hhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---
Confidence            9877 4778888876 77899999999999889999999999999999 8999999999999999999999998876   


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKS  327 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (375)
                      .++.+.+.+++++.++|++||++|+...+..++++++++ |+++.+|... ....++...+..+++++.++.   ....+
T Consensus       213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~  287 (337)
T cd08261         213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK-GPVTFPDPEFHKKELTILGSR---NATRE  287 (337)
T ss_pred             cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC-CCCccCHHHHHhCCCEEEEec---cCChh
Confidence            678888888887778999999998766889999999997 9999998665 344555556666788877653   12345


Q ss_pred             CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC-e-eEEEEeC
Q 017201          328 DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLITI  375 (375)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvi~~  375 (375)
                      .+..++++++++.+++.+.+...+++++++++++.+.+++ . .|+|+++
T Consensus       288 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         288 DFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             hHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            6888999999999986434677999999999999998873 4 6999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-41  Score=318.02  Aligned_cols=317  Identities=25%  Similarity=0.378  Sum_probs=268.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.+++ .+++++++.|+++++||+||+.++++|++|++ ..|.++   +|.++|||++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            6899998876 69999999999999999999999999999999 777654   5788999999999999987   67999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccc-cCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGL-MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      +|...+..+|+.|++|+.+.+..|...+..  ++ ..+                  |+|++|++++.+.++++|++++.+
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~~  133 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL--GIVDRD------------------GAFAEYLTLPLENLHVVPDLVPDE  133 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCccc--CccCCC------------------CceEEEEEechHHeEECcCCCCHH
Confidence            999999999999999999999999886543  32 123                  399999999999999999999998


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +++.+ ..+.++|. +.+..++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|++.+++..+  
T Consensus       134 ~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--  208 (319)
T cd08242         134 QAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA--  208 (319)
T ss_pred             Hhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc--
Confidence            88864 34556665 4577889999999999889999999999999999 7999999999999999999988877644  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                       .         +.+.++|++||++|+...+..++++++++ |+++..+... ....++...+..++.++.++..      
T Consensus       209 -~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~------  270 (319)
T cd08242         209 -E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA-GPASFDLTKAVVNEITLVGSRC------  270 (319)
T ss_pred             -c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCccCHHHheecceEEEEEec------
Confidence             1         34458999999998866889999999997 9999876544 3456666667778888887642      


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ..+.++++++.++++++.+++.+.|+++++++|++.++++..+|+||+.
T Consensus       271 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~  319 (319)
T cd08242         271 GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP  319 (319)
T ss_pred             ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence            2378899999999997666788999999999999999877667999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-41  Score=325.81  Aligned_cols=338  Identities=25%  Similarity=0.403  Sum_probs=275.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC------C-CCCCCcccCcceeEEEEEeCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF------P-APLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~------~-~~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      +.+.++...  .++++++|.|+++++||+||+.++++|++|++ +.+..      + ...+|.++|||++|+|+++|+++
T Consensus        29 ~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v  106 (384)
T cd08265          29 LGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV  106 (384)
T ss_pred             ceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence            445555533  59999999999999999999999999999998 66321      1 13567899999999999999999


Q ss_pred             CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      +.+++||+|++.+..+|+.|+.|..+++..|.....  .|+..+                  |+|++|+.++++.++++|
T Consensus       107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~------------------g~~~~~v~v~~~~~~~lP  166 (384)
T cd08265         107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFSAD------------------GAFAEYIAVNARYAWEIN  166 (384)
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeecCC------------------CcceeeEEechHHeEECC
Confidence            999999999999999999999999999999986432  233223                  499999999999999999


Q ss_pred             CCC-------Ccccccccccchhhhhhhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          161 PSI-------DPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       161 ~~~-------~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      +++       +.. +++++.++++||+++... +++++|++|||+|+|++|++++++|+..|+.+|++++++++|.+.++
T Consensus       167 ~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~  245 (384)
T cd08265         167 ELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAK  245 (384)
T ss_pred             ccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            864       344 555666889999987655 68999999999988999999999999999867999999999999999


Q ss_pred             hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC
Q 017201          233 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG  311 (375)
Q Consensus       233 ~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~  311 (375)
                      ++|++.++++++....++...+++++.++++|+|+|++|+. ..+..++++++++ |+++.+|.... ...+++..+..+
T Consensus       246 ~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~  323 (384)
T cd08265         246 EMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT-TVPLHLEVLQVR  323 (384)
T ss_pred             HcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC-CCcccHHHHhhC
Confidence            99999988876411136788888888888999999999863 4678999999997 99999986642 334445556567


Q ss_pred             CceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201          312 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI  373 (375)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi  373 (375)
                      ..++.++....  ....+.+++++++++.+++.+++++.|+++++++|++.+.++...|+|+
T Consensus       324 ~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  383 (384)
T cd08265         324 RAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI  383 (384)
T ss_pred             ceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence            77887765321  2346889999999999987666778999999999999987665568876

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9e-42  Score=321.56  Aligned_cols=334  Identities=25%  Similarity=0.447  Sum_probs=279.2

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 017201           10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDI   88 (375)
Q Consensus        10 ~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~   88 (375)
                      |+++.+..+..+++++++.|+|.++||+||+.++++|++|++ +.|......+|.++|||++|+|+++|+++..+++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            567788888779999999999999999999999999999999 8887655567899999999999999999999999999


Q ss_pred             EEe-eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           89 VIP-TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        89 V~~-~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      |++ .....|++|++|.++..++|++......|....+             ....|+|+||+.++.+.++++|+++++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~  147 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDG-------------TITQGGYADHIVVDERFVFKIPEGLDSAA  147 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcccccccCC-------------CcCCCcceeEEEechhheEECCCCCCHHH
Confidence            984 4456899999999999999988654321111101             12235999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ++.+++.+.+||+++. ..++++|++|+|.|+|++|++++++|+..|+ +|+++++++++.++++++|++.+++..+   
T Consensus       148 aa~l~~~~~ta~~~~~-~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~---  222 (337)
T cd05283         148 AAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD---  222 (337)
T ss_pred             hhhhhhHHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---
Confidence            9999999999999864 4569999999998889999999999999999 9999999999999999999998887765   


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKS  327 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (375)
                      .++...   .  +.++|++||++++...+..++++++++ |+++.+|.... ...+++..++.+++++.++....   .+
T Consensus       223 ~~~~~~---~--~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~  292 (337)
T cd05283         223 PEAMKK---A--AGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE-PLPVPPFPLIFGRKSVAGSLIGG---RK  292 (337)
T ss_pred             hhhhhh---c--cCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC-CCccCHHHHhcCceEEEEecccC---HH
Confidence            333221   1  347999999999875589999999997 99999997653 33667777677999999887542   35


Q ss_pred             CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          328 DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      .+..+++++.++++++  .+ +.++++++++||+.+.+++. +|+|++
T Consensus       293 ~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         293 ETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            7888999999999874  34 68999999999999998887 598874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=2.6e-41  Score=319.12  Aligned_cols=336  Identities=29%  Similarity=0.442  Sum_probs=285.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.+++ .+.+++.+.|++.+++|+||+.++++|+.|+. +.+..+.+..|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPN-DVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCC-ceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            6899998887 59999999999999999999999999999999 777654344578899999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc-----EEEcCCC
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY-----VVKVDPS  162 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~lp~~  162 (375)
                      +|+..+..+|++|+.|..++.++|....+.  |...+                  |+|++|+.++++.     ++++|++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~v~v~~~~~~~~~~~~lP~~  139 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF--GNLYD------------------GGFAEYVRVPAWAVKRGGVLKLPDN  139 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCccee--ccCCC------------------CcceeeEEecccccccccEEECCCC
Confidence            999999999999999999999999875432  33233                  4999999999998     9999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++.+++.+ ..+.+||+++. ..++++|++|||+|+|.+|++++|+|+..|++.|+++++++++.+.++++|.+.++++
T Consensus       140 ~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~  217 (343)
T cd08235         140 VSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDA  217 (343)
T ss_pred             CCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecC
Confidence            999999876 68889999874 4589999999999889999999999999999339999999999999999999999988


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeec
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      ++   .++.+.+++...++++|++||++++...+..++++++++ |+++.++.... ....++...+..+++++.++...
T Consensus       218 ~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (343)
T cd08235         218 AE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA  293 (343)
T ss_pred             Cc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC
Confidence            77   678888888888778999999999766889999999997 99999986543 23455556666688888765422


Q ss_pred             cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                         ....+..++++++++.+++.+.+...++++++.++++.+.+++..|+|++
T Consensus       294 ---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~  343 (343)
T cd08235         294 ---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT  343 (343)
T ss_pred             ---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence               23567889999999998765556778999999999999988774488874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.9e-41  Score=322.46  Aligned_cols=341  Identities=26%  Similarity=0.355  Sum_probs=280.4

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      ||++++.+++ .++++++|+|++ .++||+||+.++++|++|++ +.|..+ ..+|.++|||++|+|+++|+++..+++|
T Consensus         1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            5889998886 699999999986 79999999999999999999 877665 3468899999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCccccccccccc----ccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcC
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIAL----NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVD  160 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp  160 (375)
                      |+|+..+..+|+.|.+|+.+....|.+.....    +|+..              ...-.|+|++|+.++.+  .++++|
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~g~~a~y~~v~~~~~~~~~lP  144 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVD--------------MGPYGGGQAEYLRVPYADFNLLKLP  144 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccc--------------cCCCCCeeeeEEEeecccCcEEECC
Confidence            99999999999999999999999997632110    01100              00002589999999976  899999


Q ss_pred             CCCCcc---cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          161 PSIDPS---DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       161 ~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      ++++++   +++.++.++.|||+++ ..+++++|++|||+|+|++|++++|+|++.|+.+|++++++++|.++++++|+.
T Consensus       145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~  223 (375)
T cd08282         145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI  223 (375)
T ss_pred             CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe
Confidence            999998   5677888899999987 788999999999998899999999999999976798999999999999999984


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChh-----------hHHHHHHhcccCCeEEEEEccCCC--------
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS-----------LLSEALETTKVGKGKVIVIGVGVD--------  298 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~--------  298 (375)
                       .++..+   .++.+.+.++++ .++|++||++|+..           .+..++++++++ |+++.+|....        
T Consensus       224 -~v~~~~---~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~  297 (375)
T cd08282         224 -PIDFSD---GDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDA  297 (375)
T ss_pred             -EeccCc---ccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccc
Confidence             566655   577788888777 48999999998762           488999999997 99988876432        


Q ss_pred             ----ccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEe
Q 017201          299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  374 (375)
Q Consensus       299 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~  374 (375)
                          ....++...++.++..+.+....   ....+..+++++.++++++..++.+.+++++++++++.+.+++..|+|++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~  374 (375)
T cd08282         298 AAKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIK  374 (375)
T ss_pred             cccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeC
Confidence                12345666666677777665421   24568889999999999876568899999999999999988775599986


Q ss_pred             C
Q 017201          375 I  375 (375)
Q Consensus       375 ~  375 (375)
                      +
T Consensus       375 ~  375 (375)
T cd08282         375 P  375 (375)
T ss_pred             C
Confidence            3

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=3.7e-41  Score=318.17  Aligned_cols=333  Identities=28%  Similarity=0.436  Sum_probs=276.5

Q ss_pred             EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCC-CC--CCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201           11 AVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEG-FP--APLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus        11 a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~-~~--~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |+++.++. .+++++.+.|++.++||+|++.++++|+.|++ +.+. ..  ...+|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            46777775 69999999999999999999999999999998 6432 11  12457789999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|++.+..+|+.|++|+.|.+.+|++....  +..                 ...|+|++|++++++.++++|++++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------~~~g~~~~~~~v~~~~~~~lP~~~~~~  140 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATP-----------------PVDGTLCRYVNHPADFCHKLPDNVSLE  140 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCcccc--ccc-----------------cCCCceeeeEEecHHHcEECcCCCCHH
Confidence            9999999999999999999999999864221  100                 012499999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +++.+ .++++|++++ +.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++.++++++|++.+++.++  
T Consensus       141 ~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--  216 (343)
T cd05285         141 EGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--  216 (343)
T ss_pred             Hhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--
Confidence            99877 4788899876 7889999999999988999999999999999944999999999999999999999998776  


Q ss_pred             cccH---HHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          247 NKSI---SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       247 ~~~~---~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                       .++   .+.+.+.+.++++|++||++|+...++.++++++++ |+++.+|.... ...+++..+..+++++.++..   
T Consensus       217 -~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---  290 (343)
T cd05285         217 -EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP-EVTLPLSAASLREIDIRGVFR---  290 (343)
T ss_pred             -ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC-CCccCHHHHhhCCcEEEEecc---
Confidence             443   677777777778999999999866789999999997 99999986653 344555556667888776542   


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEe
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLIT  374 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~  374 (375)
                       ....+..+++++.++.+.+.+.+.+.++++++.+|++.+.+++  .+|++|.
T Consensus       291 -~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         291 -YANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             -ChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence             2356888999999998775555778899999999999998774  3799874

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.1e-41  Score=317.59  Aligned_cols=324  Identities=23%  Similarity=0.362  Sum_probs=264.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-----------CCCCCcccCcceeEEEEEe
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-----------APLYPRVLGHEGVGVVESA   76 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-----------~~~~p~i~G~e~~G~Vv~v   76 (375)
                      |||+++..+  .+++++++.|+++++||+|++.++++|++|++ +.|...           ...+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            689999866  69999999999999999999999999999998 766321           2335788999999999999


Q ss_pred             CCCCCC-CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201           77 GDEVKE-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY  155 (375)
Q Consensus        77 G~~v~~-~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  155 (375)
                      |+++++ +++||+|+..+..+|+.|++|..|...            ..                  .|+|++|+.++.+.
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~------------~~------------------~g~~~~~~~v~~~~  128 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------------EA------------------PGGYAEYMLLSEAL  128 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc------------CC------------------CCceeeeEEechHH
Confidence            999987 999999999999999999999432110            01                  24999999999999


Q ss_pred             EEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201          156 VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       156 ~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      ++++|+++++++++ ++.++++||++ ...+++++|++|||+|+|++|.+++|+|+.+|+..++++++++++.++++++|
T Consensus       129 ~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g  206 (341)
T cd08262         129 LLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMG  206 (341)
T ss_pred             eEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcC
Confidence            99999999999887 56688899987 47889999999999988999999999999999966888888999999999999


Q ss_pred             CcEEeCCCCCCcccHHH---HHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCC
Q 017201          236 MTDFINPDDEPNKSISE---LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGG  312 (375)
Q Consensus       236 ~~~v~~~~~~~~~~~~~---~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~  312 (375)
                      ++.++++++   .+..+   .+.....+.++|++||++|+...+..++++++++ |+++.+|.... ...+.+.....++
T Consensus       207 ~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~  281 (341)
T cd08262         207 ADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCME-SDNIEPALAIRKE  281 (341)
T ss_pred             CcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCC-CCccCHHHHhhcc
Confidence            988888765   32211   3445555668999999998854778899999997 99999986642 2223333334477


Q ss_pred             ceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          313 RTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      +++.++...   ..+.+.++++++.++.+++.+++.+.+++++++++++.+.+++. .|+|++
T Consensus       282 ~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         282 LTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             eEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            777755321   23468889999999999876667889999999999999988776 598874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.2e-40  Score=317.09  Aligned_cols=338  Identities=24%  Similarity=0.396  Sum_probs=271.0

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      +++++++.+++ .+++++.+.|++.++||+||+.++++|++|++ +.+...   ...+|.++|||++|+|+++|++++.+
T Consensus        17 ~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
T PLN02702         17 ENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHL   95 (364)
T ss_pred             ccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCC
Confidence            46666666665 59999999998999999999999999999999 765321   12357789999999999999999999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      ++||+|++.+..+|+.|++|++|.++.|+...+  ++...                 ..|+|++|+.++.+.++++|+++
T Consensus        96 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~--~~~~~-----------------~~g~~~~y~~v~~~~~~~~P~~l  156 (364)
T PLN02702         96 VVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF--FATPP-----------------VHGSLANQVVHPADLCFKLPENV  156 (364)
T ss_pred             CCCCEEEEcCCCCCCCCcchhCcCcccCCCccc--cCCCC-----------------CCCcccceEEcchHHeEECCCCC
Confidence            999999999999999999999999999986321  11110                 12499999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++.++++.. .+.++++++ ...++.+|++|||+|+|++|++++++|+..|+..|+++++++++.++++++|++.+++..
T Consensus       157 ~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~  234 (364)
T PLN02702        157 SLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVS  234 (364)
T ss_pred             CHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecC
Confidence            999887632 445577765 678899999999998899999999999999996688888899999999999998876543


Q ss_pred             CCCcccHHHHHHhh--cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          244 DEPNKSISELVKGI--THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       244 ~~~~~~~~~~i~~~--~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      . ...++.+.+.++  ..+.++|++||++|+...+..++++++++ |+++.+|.... ...++...+..+++++.+++. 
T Consensus       235 ~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~-  310 (364)
T PLN02702        235 T-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFR-  310 (364)
T ss_pred             c-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC-CCcccHHHHHhCccEEEEecc-
Confidence            2 114566666554  23447999999999766899999999997 99999986542 334455566678899888652 


Q ss_pred             cccCCCCHHHHHHHHHcCCCCCCcceeeEeec--ccHHHHHHHHcCCCe-eEEEEe
Q 017201          322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL--EEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                         ....+..++++++++++++.+++++.|++  +++++|++.+.+++. .|+|+.
T Consensus       311 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        311 ---YRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             ---ChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence               23467889999999998765667788666  799999999887765 599885

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=9.8e-41  Score=314.59  Aligned_cols=331  Identities=28%  Similarity=0.426  Sum_probs=275.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.+++...++++.|.|++.++||+|||.++++|++|++ +.|..+. ..|.++|||++|+|+++|+++..+++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            7899999888655589999999999999999999999999999 7776542 3467899999999999999999999999


Q ss_pred             EEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           88 IVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        88 ~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      +|++.+ ..+|+.|..|..+..++|.....  .|+..+|                  +|++|+.++.+.++++|+++++.
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------------~~~~~~~v~~~~~~~~p~~~~~~  139 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYTVDG------------------GMAEQCIVTADYAVKVPEGLDPA  139 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCccc--cCccccC------------------cceeEEEEchHHeEeCCCCCCHH
Confidence            999755 57899999999999999987543  2333343                  99999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      +++.++..+.|||+++ ..+++++|++|||+|+|++|++++++|+.. |+ +|+++++++++.+.++++|++.+++.++ 
T Consensus       140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-  216 (338)
T PRK09422        140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-  216 (338)
T ss_pred             HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence            9999999999999987 778999999999999999999999999984 98 8999999999999999999999888753 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                       ..++.+.+++..+  ++|+++++.++...+..++++++++ |+++.+|... ...+++...+..+.+++.++...   .
T Consensus       217 -~~~~~~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~---~  288 (338)
T PRK09422        217 -VEDVAKIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP-ESMDLSIPRLVLDGIEVVGSLVG---T  288 (338)
T ss_pred             -cccHHHHHHHhcC--CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC-CCceecHHHHhhcCcEEEEecCC---C
Confidence             1356667777665  6896555555556899999999997 9999998664 24445555566678888775422   2


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      .+.++.+++++.++++++  .+. .++++++++|++.+.+++. .|+++.
T Consensus       289 ~~~~~~~~~l~~~g~l~~--~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~  335 (338)
T PRK09422        289 RQDLEEAFQFGAEGKVVP--KVQ-LRPLEDINDIFDEMEQGKIQGRMVID  335 (338)
T ss_pred             HHHHHHHHHHHHhCCCCc--cEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence            356788999999998864  344 6899999999999988777 488875

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1e-40  Score=314.20  Aligned_cols=334  Identities=30%  Similarity=0.453  Sum_probs=285.9

Q ss_pred             eeEEEEecCCCC-eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            9 CKAVVCWGLGEP-LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         9 ~~a~~~~~~~~~-l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      |||+++..++++ +.+++.+.|.+++++|+|++.++++|+.|+. ..|..+ ...+|.++|+|++|+|+.+|+++..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            789999999987 6778888889999999999999999999999 877665 2456788999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||+|+..+..+|+.|+.|..++...|......  |...+                  |+|++|+.++.+.++++|+++++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~~  140 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLGID------------------GGFAEYIVVPARALVPVPDGVPF  140 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccccC------------------CcceeeEEechHHeEECCCCCCH
Confidence            99999999999999999999999999654332  33333                  39999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      .+++.++.++.|||+++....+++++++|||.|+|++|++++++|+..|+ +|+++++++++.+.++++|++.+++..+ 
T Consensus       141 ~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~-  218 (338)
T cd08254         141 AQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD-  218 (338)
T ss_pred             HHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC-
Confidence            99999999999999988777889999999998889999999999999998 8999999999999999999988887765 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                        ....+.+ ....+.++|+++|++|....+..++++++++ |+++.+|... ....++...+..++.++.++...   .
T Consensus       219 --~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~---~  290 (338)
T cd08254         219 --DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGR-DKLTVDLSDLIARELRIIGSFGG---T  290 (338)
T ss_pred             --cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCC-CCCccCHHHHhhCccEEEEeccC---C
Confidence              4555555 5556668999999998777889999999998 9999998764 34455666677788888876422   2


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ...+..++++++++.+++.   .+.+++++++++++.+.+++. .|+|+++
T Consensus       291 ~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         291 PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            4568889999999998854   568999999999999988776 5998874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-41  Score=315.98  Aligned_cols=329  Identities=32%  Similarity=0.454  Sum_probs=276.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.++++++++++.|.|.++++|++||+.++++|++|++ ..|..+...+|.++|||++|+|+++|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            7899999999889999999999999999999999999999999 888766556688999999999999999998899999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      +|++.+..+|+.|++|..+.++.|.....  +|...+                  |+|++|+.++.+.++++|+++++.+
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~~~~  140 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG--YGEELD------------------GFFAEYAKVKVTSLVKVPPNVSDEG  140 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCccccc--cccccC------------------ceeeeeeecchhceEECCCCCCHHH
Confidence            99999889999999999999999987543  232223                  3999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      ++.+++.+.+||+++... .++++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++++ ++.+++.+   
T Consensus       141 ~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~---  214 (334)
T PRK13771        141 AVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS---  214 (334)
T ss_pred             hhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch---
Confidence            999999999999987554 8999999999998 9999999999999999 899999999999999888 76666543   


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-cccchHHHhhcCCceEEEEeeccccC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-MVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                        ++.+.++++  + ++|++||++|+. .+..++++++++ |+++.+|..... ...++....+.+++++.+...   ..
T Consensus       215 --~~~~~v~~~--~-~~d~~ld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  284 (334)
T PRK13771        215 --KFSEEVKKI--G-GADIVIETVGTP-TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---AT  284 (334)
T ss_pred             --hHHHHHHhc--C-CCcEEEEcCChH-HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CC
Confidence              245555554  3 699999999986 788999999997 999999976431 212333333457888887632   23


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +++++.++++++++.+++  .+.+.++++++++|++.+.+++. .|+|+.+
T Consensus       285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        285 KRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            456888999999999873  47789999999999999987665 5888763

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.7e-40  Score=313.33  Aligned_cols=335  Identities=30%  Similarity=0.473  Sum_probs=286.1

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      |||+++..++ ..+++++++.|.+.++|++||+.++++|++|++ +.+.++. ...|.++|||++|+|+++|+++..+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            7899998776 459999999999999999999999999999998 7776543 345678999999999999999999999


Q ss_pred             CCEEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           86 GDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        86 Gd~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      ||+|+..+ ..+|+.|++|..+...+|......  |+...                  |+|++|+.++.+.++++|++++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~s~~~~~~~~~~~lp~~~~  140 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYTVD------------------GTFAEYAIADARYVTPIPDGLS  140 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCcccc--ccccC------------------CcceeEEEeccccEEECCCCCC
Confidence            99999776 688999999999999999875432  33333                  4899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.+++.+
T Consensus       141 ~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~  218 (341)
T cd08297         141 FEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFK  218 (341)
T ss_pred             HHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCC
Confidence            99999999999999998755 58999999999988 7799999999999999 999999999999999999999999887


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      +   .++...+.++++++++|++||+.++...+..++++++++ |+++.+|.......+++...+..+++++.+....  
T Consensus       219 ~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--  292 (341)
T cd08297         219 K---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG--  292 (341)
T ss_pred             C---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC--
Confidence            6   578888888887779999999887766889999999997 9999998765333466666666788988875422  


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                       ..+.++.++++++++++++  .+ ..|++++++++++.+.+++. .|+|+++
T Consensus       293 -~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         293 -TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             -CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence             1356888999999999874  23 57999999999999988776 5999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-41  Score=316.11  Aligned_cols=317  Identities=23%  Similarity=0.264  Sum_probs=254.6

Q ss_pred             CCCCccceeeEEEEec-CCC-----CeEEEE---eecC-CCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCc--
Q 017201            1 MSNSQAITCKAVVCWG-LGE-----PLKVEE---IQVE-PPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGH--   67 (375)
Q Consensus         1 m~~~~~~~~~a~~~~~-~~~-----~l~~~~---~~~p-~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~--   67 (375)
                      |-+.+..++|.+++.. +..     .|++++   ++.| ++++|||+|||.++++||.|.. ..+.......|.++|+  
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~   80 (348)
T PLN03154          1 MMEGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRI   80 (348)
T ss_pred             CCCCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCee
Confidence            3344566788888843 321     277776   3666 3479999999999999999887 4432222235889998  


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceee
Q 017201           68 EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSE  147 (375)
Q Consensus        68 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~  147 (375)
                      |++|+|..+|++++.+++||+|+..                                                  |+|+|
T Consensus        81 ~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------------~~~ae  110 (348)
T PLN03154         81 EGFGVSKVVDSDDPNFKPGDLISGI--------------------------------------------------TGWEE  110 (348)
T ss_pred             EeeEEEEEEecCCCCCCCCCEEEec--------------------------------------------------CCcEE
Confidence            8899999999999999999999721                                                  28999


Q ss_pred             eEEeeccc--EEE--cCCCCCcc-cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Q 017201          148 YMVIDANY--VVK--VDPSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI  221 (375)
Q Consensus       148 ~~~v~~~~--~~~--lp~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~  221 (375)
                      |+.++.+.  +.+  +|++++++ ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++
T Consensus       111 y~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~  189 (348)
T PLN03154        111 YSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGS  189 (348)
T ss_pred             EEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEE
Confidence            99998753  544  59999986 688899999999999877889999999999998 9999999999999999 89999


Q ss_pred             cCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc
Q 017201          222 DKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM  300 (375)
Q Consensus       222 ~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~  300 (375)
                      ++++++.++++ ++|++.++++.+  ..++.+.+++.+++ ++|++||++|+. .+..++++++++ |+++.+|...+..
T Consensus       190 ~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~-gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~~  264 (348)
T PLN03154        190 AGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPE-GIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLNS  264 (348)
T ss_pred             cCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCC-CcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccCC
Confidence            99999999987 799999998864  13677778777764 899999999986 889999999998 9999999765322


Q ss_pred             c-----cchHHHhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEE
Q 017201          301 V-----PLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVL  372 (375)
Q Consensus       301 ~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvv  372 (375)
                      .     .++...++.+++++.|+....+.  ..+.++++++++++|++++  .+..+|+|+++++|++.+.+++. +|+|
T Consensus       265 ~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvV  342 (348)
T PLN03154        265 LSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQV  342 (348)
T ss_pred             CCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEE
Confidence            1     13555677789999987644321  1235677999999999985  36778999999999999998887 5999


Q ss_pred             EeC
Q 017201          373 ITI  375 (375)
Q Consensus       373 i~~  375 (375)
                      |++
T Consensus       343 l~~  345 (348)
T PLN03154        343 IRV  345 (348)
T ss_pred             EEe
Confidence            874

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1e-41  Score=312.88  Aligned_cols=270  Identities=24%  Similarity=0.340  Sum_probs=226.6

Q ss_pred             ccCcceeEEEEEeCCCCC------CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCccee
Q 017201           64 VLGHEGVGVVESAGDEVK------EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY  137 (375)
Q Consensus        64 i~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~  137 (375)
                      ++|||++|+|+++|++|+      ++++||||++.+..+|+.|.+|+.|+++.|++....  |+...+.           
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~-----------   67 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHEALDS-----------   67 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--CcccccC-----------
Confidence            589999999999999999      899999999999999999999999999999986542  3321100           


Q ss_pred             cccccCceeeeEEeecc-cEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Q 017201          138 HIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA  216 (375)
Q Consensus       138 ~~~~~g~~a~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~  216 (375)
                      .....|+|+||+.++++ .++++|+++++++++++++.+.|||+++. .....+|++|||+|+|++|++++|+||++|++
T Consensus        68 ~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~  146 (280)
T TIGR03366        68 GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAA  146 (280)
T ss_pred             CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            00112499999999997 79999999999999999999999999764 45667999999999999999999999999995


Q ss_pred             eEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          217 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       217 ~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +|++++++++|+++++++|++.+++..+     ..+.+++++.+.++|++||++|++..++.++++++++ |+++.+|..
T Consensus       147 ~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~  220 (280)
T TIGR03366       147 RVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV  220 (280)
T ss_pred             EEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccC
Confidence            5999999999999999999999887643     3455666777778999999999887899999999998 999999975


Q ss_pred             CC-ccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcC--CCCCCcceeeEeecccH
Q 017201          297 VD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEI  356 (375)
Q Consensus       297 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  356 (375)
                      .. ...++++..++.|++++.++...   ..++++++++++.++  ++++.++++++||++++
T Consensus       221 ~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       221 FPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             CCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            42 45677888888899999997532   235789999999974  67777889999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.5e-40  Score=311.48  Aligned_cols=336  Identities=29%  Similarity=0.435  Sum_probs=279.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++++.+ .+.+++.++|+++++||+||+.++++|++|+. ..+.. ....|.++|+|++|+|+.+|+++..+++||
T Consensus         1 ~~a~~~~~~~-~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPG-DLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCC-ceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            6899999886 49999999999999999999999999999998 77755 234578899999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      +|+..+...|+.|++|..++.+.|+....  .|....                  |+|++|+.++++.++++|+++++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~~~~~~~~~lP~~~~~~~  138 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSRRD------------------GAFAEYVSVPARNLIKIPDHVDYEE  138 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcce--EecccC------------------CcccceEEechHHeEECcCCCCHHH
Confidence            99999999999999999999999987532  233333                  4999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ++++ ..+.+||+++. .+.+++|++|||+|+|.+|++++|+|+.+|+.+|+++++++++.++++++|++.+++.++   
T Consensus       139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~---  213 (343)
T cd08236         139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE---  213 (343)
T ss_pred             HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---
Confidence            9887 57889999875 788999999999988999999999999999944999999999999999999988988876   


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-c-ccchHHHhhcCCceEEEEeecccc-
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-M-VPLNVIALACGGRTLKGTTFGGIK-  324 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-  324 (375)
                      .. .+.+++..+++++|++||++|+...+..++++++++ |+++.+|..... . ...++..++.++.++.+....... 
T Consensus       214 ~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (343)
T cd08236         214 ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAP  291 (343)
T ss_pred             cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccc
Confidence            45 667777777778999999998766889999999997 999999866431 1 222333445688888887643211 


Q ss_pred             -CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC-CCe-eEEEE
Q 017201          325 -TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ-PDC-VKVLI  373 (375)
Q Consensus       325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~-~kvvi  373 (375)
                       ..+.++++++++.++++.+.+++...++++++.++++.+.+ +.. .|+|+
T Consensus       292 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         292 FPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             cchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence             13467788899999998654456788999999999999987 444 48764

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.7e-40  Score=311.02  Aligned_cols=310  Identities=22%  Similarity=0.283  Sum_probs=264.1

Q ss_pred             eeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            9 CKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         9 ~~a~~~~~~~~~---l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      |||+++.+++.+   ++++++|.|.+.++||+|||.++++|++|++ +.|.++ .+.+|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            689999887653   7889999999999999999999999999999 877664 34568899999999999999999999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      ++||+|++.+.                                               .|+|++|+.++...++++|+++
T Consensus        81 ~~Gd~V~~~~~-----------------------------------------------~g~~~~~~~~~~~~~~~ip~~~  113 (324)
T cd08292          81 QVGQRVAVAPV-----------------------------------------------HGTWAEYFVAPADGLVPLPDGI  113 (324)
T ss_pred             CCCCEEEeccC-----------------------------------------------CCcceeEEEEchHHeEECCCCC
Confidence            99999985431                                               1389999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      ++++++.+++.+.+||+++ ..+++++|++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.++++|++.+++.
T Consensus       114 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (324)
T cd08292         114 SDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVST  191 (324)
T ss_pred             CHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcC
Confidence            9999999998889999876 5688999999999987 9999999999999999 89999888888888888999888888


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      .+   .++.+.++++++++++|++||++|+. ....++++++++ |+++.+|........+++..+..+++++.++....
T Consensus       192 ~~---~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08292         192 EQ---PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG-GTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGR  266 (324)
T ss_pred             CC---chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC-cEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHH
Confidence            76   67888899999888999999999986 778999999997 99999987543344566666666899999887543


Q ss_pred             ccC-------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          323 IKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       323 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      +..       ...+..+++++.++.+++.  +.+.|+++++.+|++.+.++.. .|++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         267 WSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            211       2356778999999999854  4678999999999999877655 588863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=5.7e-40  Score=309.82  Aligned_cols=336  Identities=29%  Similarity=0.432  Sum_probs=274.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||++++.++..+++.+.+.|+|+++|++||+.++++|+.|++ +.+..   ....+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            6899999888779999999999999999999999999999998 55432   1233567899999999999999998999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+..+|+.|.+|..+++++|....+  .|....                  |+|++|++++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~v~v~~~~~~~lP~~~~  140 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI--LGVDTD------------------GCFAEYVVVPEENLWKNDKDIP  140 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccce--EeccCC------------------CcceEEEEechHHcEECcCCCC
Confidence            99999999999999999999999999976321  232222                  4899999999999999999998


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      ++.+ +++..+.++++++.  ...++|++|||+|+|++|++++|+|+..|+++|++++++++|.++++++|++.+++.++
T Consensus       141 ~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~  217 (341)
T cd05281         141 PEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE  217 (341)
T ss_pred             HHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc
Confidence            8554 55557788887654  45689999999988999999999999999866888888899999999999998888765


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH-HhhcCCceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGGRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  323 (375)
                         .++. .++++.+++++|++||++|+......++++++++ |+++.+|.... ...+++. .+..+++.+.+....  
T Consensus       218 ---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~--  289 (341)
T cd05281         218 ---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGR--  289 (341)
T ss_pred             ---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CcccccchhhhccceEEEEEecC--
Confidence               5677 7888888779999999998876789999999998 99999986643 2233322 245577777765421  


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      .....+..+++++.++.+++.+++.+.+++++++++++.+.+++.+|+|++.
T Consensus       290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~  341 (341)
T cd05281         290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP  341 (341)
T ss_pred             CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence            1234577889999999988666677889999999999999887755998863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.6e-40  Score=307.83  Aligned_cols=329  Identities=32%  Similarity=0.482  Sum_probs=274.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++..+++++.++++|.|++.+++|+|++.++++|++|++ +.|..+....|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            6899998766679999999999999999999999999999999 888766556788999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      +|++.+...|+.|++|+.+.+++|.....  .|...+                  |+|++|+.++.+.++++|+++++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~ip~~~~~~~  140 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRAE--YGEEVD------------------GGFAEYVKVPERSLVKLPDNVSDES  140 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCccc--cccccC------------------CeeeeEEEechhheEECCCCCCHHH
Confidence            99999989999999999999999986421  232222                  4999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      ++.+++++.+||+++.. +++++++++||+|+ |++|++++++++..|+ +|+++++++++.+.+++++.+.+++..   
T Consensus       141 ~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~---  215 (332)
T cd08259         141 AALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS---  215 (332)
T ss_pred             HhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH---
Confidence            99999999999998766 88999999999998 9999999999999999 899999999999989889987777542   


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                        ++.+.+.+..   ++|++++++|.. ....+++++++. |+++.++........++......++.++.++..   ...
T Consensus       216 --~~~~~~~~~~---~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  285 (332)
T cd08259         216 --KFSEDVKKLG---GADVVIELVGSP-TIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLLILKEIRIIGSIS---ATK  285 (332)
T ss_pred             --HHHHHHHhcc---CCCEEEECCChH-HHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecC---CCH
Confidence              2555555543   699999999987 678999999997 999999866432222333334347777766531   123


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      ..+..+++++.++.+++  ++++.++++++++|++.+.+++. .|+|++
T Consensus       286 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         286 ADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            46788999999998874  46789999999999999988776 488864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=7.7e-40  Score=308.83  Aligned_cols=332  Identities=28%  Similarity=0.397  Sum_probs=274.5

Q ss_pred             EecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201           14 CWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV   89 (375)
Q Consensus        14 ~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V   89 (375)
                      -+.++.++++++.|.|+|+++||+||+.++++|++|+. +.+..   ....+|.++|+|++|+|+++|++++.+++||+|
T Consensus         4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V   83 (340)
T TIGR00692         4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV   83 (340)
T ss_pred             cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence            35678889999999999999999999999999999998 65542   112357789999999999999999999999999


Q ss_pred             EeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccc
Q 017201           90 IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS  169 (375)
Q Consensus        90 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa  169 (375)
                      +..+...|+.|..|..+....|++.+.  +|+...                  |+|++|++++++.++++|++++.+++ 
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~~~~a-  142 (340)
T TIGR00692        84 SVETHIVCGKCYACRRGQYHVCQNTKI--FGVDTD------------------GCFAEYAVVPAQNIWKNPKSIPPEYA-  142 (340)
T ss_pred             EECCcCCCCCChhhhCcChhhCcCcce--EeecCC------------------CcceeEEEeehHHcEECcCCCChHhh-
Confidence            999999999999999999999999643  233223                  49999999999999999999998655 


Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCccc
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS  249 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~  249 (375)
                      +++..+.+|++++  ....++|++|+|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.+++..+   .+
T Consensus       143 ~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~  217 (340)
T TIGR00692       143 TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---ED  217 (340)
T ss_pred             hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---cC
Confidence            5667888888875  345789999999888999999999999999844888888899999999999988888776   67


Q ss_pred             HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH-HhhcCCceEEEEeeccccCCCC
Q 017201          250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGGRTLKGTTFGGIKTKSD  328 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  328 (375)
                      +.+.+.++.+++++|++||++|+...+..++++++++ |+++.+|.... ...++.. .+..+++++.+...  ....+.
T Consensus       218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  293 (340)
T TIGR00692       218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG-KVTIDFTNKVIFKGLTIYGITG--RHMFET  293 (340)
T ss_pred             HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC-CcccchhhhhhhcceEEEEEec--CCchhh
Confidence            8888888887778999999998776889999999997 99999987642 2233333 45557777776541  112345


Q ss_pred             HHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          329 LPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      +.+++++++++++++.+++.+.+++++++++++.+.+++.+|+|+++
T Consensus       294 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       294 WYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             HHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            67889999999998655578899999999999999877667999874

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.7e-39  Score=306.27  Aligned_cols=331  Identities=27%  Similarity=0.403  Sum_probs=267.1

Q ss_pred             EEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-cc-CCCC--CCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 017201           13 VCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CS-EGFP--APLYPRVLGHEGVGVVESAGDEVKEVKEGDI   88 (375)
Q Consensus        13 ~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~-g~~~--~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~   88 (375)
                      ++++.+ .+++++.++|+++++||+||+.++++|++|++ +. +..+  ...+|.++|+|++|+|+++|++++.+++||+
T Consensus         2 ~~~~~~-~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAG-DLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCC-ceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            456665 59999999999999999999999999999998 63 3321  1245788999999999999999999999999


Q ss_pred             EEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           89 VIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        89 V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      |+..+..+|+.|++|..|+++.|.+....  +.. .+              ....|+|++|+.++.+.++++|++++.++
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~  144 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL--GSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLRR  144 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccce--eecccc--------------CCCCCceeeEEEechHHeEECcCCCCHHH
Confidence            99999999999999999999999874321  110 00              00124999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      |+. ..++++||+++...... +|++|||.|+|.+|++++|+|+++|+++|+++++++++.++++++|++.+++.++   
T Consensus       145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~---  219 (339)
T cd08232         145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR---  219 (339)
T ss_pred             hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc---
Confidence            876 56888999887655555 9999999988999999999999999867999998899999999999999988765   


Q ss_pred             ccHHHHHHhhc-CCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCC
Q 017201          248 KSISELVKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       248 ~~~~~~i~~~~-~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                      .++    .++. ...++|++||+.++...++.++++|+++ |+++.+|... .....++..++.+++++.+...    ..
T Consensus       220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~----~~  289 (339)
T cd08232         220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG-GPVPLPLNALVAKELDLRGSFR----FD  289 (339)
T ss_pred             hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC-CCccCcHHHHhhcceEEEEEec----CH
Confidence            332    2222 2336999999999766789999999997 9999998554 3344455555557888877542    23


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..+.++++++.++.+++.+.+.+++++++++++++.+.+++. .|+|++.
T Consensus       290 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         290 DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            568889999999999876667889999999999999987665 6999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-39  Score=306.56  Aligned_cols=336  Identities=26%  Similarity=0.387  Sum_probs=281.1

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++...+.  .+++++.+.|++.+++|+|++.++++|++|++ +.|..+. ..+|.++|||++|+|+++|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            68999884432  37788888888899999999999999999999 7775432 34578899999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|++.+..+|+.|++|.++.++.|+....  .|....                  |+|++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~------------------g~~~~~~~~~~~~~~~~p~~~~  140 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEHVD------------------GGYAEYVAVPARNLLPIPDNLS  140 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccc--cccccC------------------cceeEEEEechHHceeCCCCCC
Confidence            99999999999999999999999999987432  233333                  3899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+++.+++++.+|++++.+..++.++++++|+|+ +.+|++++++++..|+ +|+.+++++++.+.++.++.+.+++..
T Consensus       141 ~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~  219 (342)
T cd08266         141 FEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYR  219 (342)
T ss_pred             HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecC
Confidence            99999999999999998878889999999999988 7999999999999999 899999999999988888887777765


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      +   .++.+.+.+...+.++|++++++|.. .+..++++++++ |+++.++........++....+.+++++.+....  
T Consensus       220 ~---~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  292 (342)
T cd08266         220 K---EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG-GRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMG--  292 (342)
T ss_pred             C---hHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcC-CEEEEEecCCCCCCCcCHHHHhhcceEEEEEecC--
Confidence            5   56777777777666899999999986 788999999997 9999998665433345554445588888876533  


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                       ....+..++++++++.+++  ++++.|++++++++++.+.+++. .|+++++
T Consensus       293 -~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         293 -TKAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             -CHHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence             2346778889999998874  47789999999999999987765 5998864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.3e-39  Score=304.73  Aligned_cols=331  Identities=28%  Similarity=0.429  Sum_probs=277.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.+++ .+++++.+.|++.++||+||+.++++|++|++ ..|..+. .+|.++|+|++|+|+.+|++++.+++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPG-ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCC-ceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            6899998887 59999999999999999999999999999999 8776543 3788999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      +|+..+...|+.|.+|..++.+.|.....  .|...+                  |+|++|+.++.+.++++|+++++.+
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~~~  138 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTA--VGVTRN------------------GGFAEYVVVPAKQVYKIPDNLSFEE  138 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCcce--eccCCC------------------CcceeEEEecHHHcEECcCCCCHHH
Confidence            99999999999999999999999977531  122223                  3999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ++.+ ..+.++++++ +.+++++|++|||+|+|.+|++++++|+..|+++|+++++++++.+.++++|++.+++..+   
T Consensus       139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---  213 (334)
T cd08234         139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR---  213 (334)
T ss_pred             Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---
Confidence            8876 6788898887 7889999999999988999999999999999944899999999999999999988887765   


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccccCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTK  326 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (375)
                      .++...  +.+.+.++|++||++++...+..++++++++ |+++.+|.... ....++...+..+++++.+...    ..
T Consensus       214 ~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  286 (334)
T cd08234         214 EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI----NP  286 (334)
T ss_pred             CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc----CH
Confidence            444444  3445558999999998766889999999998 99999986643 2345555555557788877642    23


Q ss_pred             CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201          327 SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI  373 (375)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi  373 (375)
                      ..++.++++++++++++.+++..++++++++++++.+.+....|+|+
T Consensus       287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi  333 (334)
T cd08234         287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV  333 (334)
T ss_pred             HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence            46788999999999987666678899999999999998833358886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.7e-40  Score=306.84  Aligned_cols=320  Identities=30%  Similarity=0.397  Sum_probs=263.3

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++..++ +.+++++.+.|+++++||+||+.++++|++|++ +.+ .....+|.++|||++|+|+++|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            6899987665 468888888888999999999999999999998 664 2222457789999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|+..+..+|+.|++|+.|..++|+....  +|+..+                  |+|++|++++.+.++++|++++++
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~~p~~~~~~  139 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVVSN------------------GGYAEYIVVPEKNLFKIPDSISDE  139 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCccce--eeccCC------------------CceeeEEEcCHHHceeCCCCCCHH
Confidence            999999999999999999999999987543  233333                  499999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      +++.+++++.+||+++. .+++++|++|+|+|+ |++|++++++|++.|+ +|+++++    .+.++++|++.+++.++ 
T Consensus       140 ~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~~-  212 (325)
T cd08264         140 LAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYDE-  212 (325)
T ss_pred             HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecchH-
Confidence            99999999999999875 489999999999998 9999999999999999 7888763    36678899988887643 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                          ..+.+++++  .++|+|+|++|+. .+..++++++++ |+++.+|........++...+..++.++.++..+   .
T Consensus       213 ----~~~~l~~~~--~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  281 (325)
T cd08264         213 ----VEEKVKEIT--KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGG---T  281 (325)
T ss_pred             ----HHHHHHHHh--CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecCCCCCCccCHHHHhhcCcEEEEccCC---C
Confidence                345566666  4899999999985 889999999998 9999998653234566666776677888776433   2


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EE
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KV  371 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kv  371 (375)
                      ++.+.++++++...+  +  .+.+.|+++++++|++.+.+++.. |+
T Consensus       282 ~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         282 RKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            356788888885333  2  256789999999999998876653 53

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1.3e-39  Score=281.37  Aligned_cols=308  Identities=26%  Similarity=0.329  Sum_probs=258.5

Q ss_pred             CccceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCC
Q 017201            4 SQAITCKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      .++...||++|.+.+.|   ++++..++|....++|+||.+|+.|||+|+. ++|.+|. +.+|.+-|.|++|+|+.+|+
T Consensus        15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs   94 (354)
T KOG0025|consen   15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS   94 (354)
T ss_pred             ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence            34567899999988876   8889999998877789999999999999999 9999986 78999999999999999999


Q ss_pred             CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201           79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK  158 (375)
Q Consensus        79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  158 (375)
                      ++++|++||+|+....                                              +.|+|++|...+++.+++
T Consensus        95 ~vkgfk~Gd~VIp~~a----------------------------------------------~lGtW~t~~v~~e~~Li~  128 (354)
T KOG0025|consen   95 NVKGFKPGDWVIPLSA----------------------------------------------NLGTWRTEAVFSESDLIK  128 (354)
T ss_pred             CcCccCCCCeEeecCC----------------------------------------------CCccceeeEeecccceEE
Confidence            9999999999984432                                              236999999999999999


Q ss_pred             cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----hhh
Q 017201          159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKA  233 (375)
Q Consensus       159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~  233 (375)
                      +++.++++.||++..+.+|||++|.+.-++++||+|.-.|+ +.+|++.+|+||++|+ +.+-+.++....+.    ++.
T Consensus       129 vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~  207 (354)
T KOG0025|consen  129 VDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKS  207 (354)
T ss_pred             cCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHH
Confidence            99999999999999999999999989999999999999999 9999999999999999 77777777655544    467


Q ss_pred             cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCc
Q 017201          234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR  313 (375)
Q Consensus       234 lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  313 (375)
                      +||++|+...+...   .+..+......++.+.|||+|+.. -....+.|.++ |..+.+|..+.++.+++...+++|++
T Consensus       208 lGA~~ViTeeel~~---~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl  282 (354)
T KOG0025|consen  208 LGATEVITEEELRD---RKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDL  282 (354)
T ss_pred             cCCceEecHHHhcc---hhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCccCCCcccccchheeccc
Confidence            99999996654111   112222234457999999999984 46778899997 99999997777888999999999999


Q ss_pred             eEEEEeeccccCCC--------CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC
Q 017201          314 TLKGTTFGGIKTKS--------DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  365 (375)
Q Consensus       314 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  365 (375)
                      .++|.++..|...+        .+.++.++++.|+|...  -.+..||++...|++...+
T Consensus       283 ~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~  340 (354)
T KOG0025|consen  283 KLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALS  340 (354)
T ss_pred             eeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHH
Confidence            99999988774433        24568888999999854  3467899998888886644

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.5e-39  Score=306.41  Aligned_cols=324  Identities=24%  Similarity=0.329  Sum_probs=262.3

Q ss_pred             eeEEEEecCCCC--eEEEE-eecCCCCCCeEEEEEeeeecCCCccc-ccCCCC--------------------CCCCCcc
Q 017201            9 CKAVVCWGLGEP--LKVEE-IQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP--------------------APLYPRV   64 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~--------------------~~~~p~i   64 (375)
                      |||+++..++.+  +.+.+ .+.|++.+++|+|||.++++|++|++ +.|.++                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688888876643  55543 57778899999999999999999998 766542                    2356889


Q ss_pred             cCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCc
Q 017201           65 LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCST  144 (375)
Q Consensus        65 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~  144 (375)
                      +|||++|+|+++|++++.+++||+|++.+...|+.|+.|..     |.   .  +|...+                  |+
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~--~~~~~~------------------g~  132 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y--IGSERD------------------GG  132 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c--cCCCCC------------------cc
Confidence            99999999999999999999999999988888888766421     11   0  122122                  39


Q ss_pred             eeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          145 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       145 ~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      |++|+.++.+.++++|+++++.+++++++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +|+++++
T Consensus       133 ~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~  210 (350)
T cd08274         133 FAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAG  210 (350)
T ss_pred             ceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeC
Confidence            99999999999999999999999999999999999976 7789999999999998 9999999999999999 7888886


Q ss_pred             ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccc
Q 017201          224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL  303 (375)
Q Consensus       224 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~  303 (375)
                      ++ +.+.++++|++.+++...   ....+  ...+.+.++|++||++|+. .+..++++++++ |+++.+|........+
T Consensus       211 ~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  282 (350)
T cd08274         211 AA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG-GRYVTAGAIAGPVVEL  282 (350)
T ss_pred             ch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC-CEEEEecccCCccccC
Confidence            65 888889999976665543   33333  4556666899999999986 789999999998 9999998654223567


Q ss_pred             hHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +...++.+++++.++...   ....+.++++++.++++++  ++.+.+++++++++++.+.+++. .|+|+.+
T Consensus       283 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         283 DLRTLYLKDLTLFGSTLG---TREVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             CHHHhhhcceEEEEeecC---CHHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            777767789999887643   2356888999999999874  46788999999999999987766 5988864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.2e-39  Score=301.71  Aligned_cols=322  Identities=28%  Similarity=0.414  Sum_probs=268.8

Q ss_pred             eeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            9 CKAVVCWGLGE----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         9 ~~a~~~~~~~~----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      |||+++.+++.    ++++++.+.|.+.++||+||+.++++|++|++ +.|..+...+|.++|||++|+|+++|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            68999988873    68888888888999999999999999999999 88876655678899999999999999999999


Q ss_pred             CCCCEEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           84 KEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        84 ~~Gd~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      ++||+|++.+ ..+|+.|.+|.++.+++|......  |+..+                  |+|++|+.++.+.++++|++
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~~~~~~~~~lp~~  140 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYTVD------------------GGYAEYMVADERFAYPIPED  140 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccccC------------------CceEEEEEecchhEEECCCC
Confidence            9999998755 478999999999999999876542  43333                  38999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++.+++.+++++.|||+++ ..++++++++|||+|+|++|++++++|++.|+ +|+++++++++.+.++++|++.+++.
T Consensus       141 ~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  218 (329)
T cd08298         141 YDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDS  218 (329)
T ss_pred             CCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEecc
Confidence            99999999999999999987 88999999999999999999999999999998 99999999999999999999887776


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      ..   .          .++++|+++++.+....++.++++++++ |+++.+|........++... ..++..+.++... 
T Consensus       219 ~~---~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~-  282 (329)
T cd08298         219 DD---L----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL-  282 (329)
T ss_pred             Cc---c----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCCCCCccchhh-hhCceEEEEecCC-
Confidence            54   1          2347999999877666899999999998 99999885432222333333 3366677665422 


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                        ....+..++++++++.+++   ..+.|+++++++|++.+.+++. .|+|+
T Consensus       283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence              2345788899999998875   2578999999999999988776 47764

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.9e-39  Score=305.93  Aligned_cols=312  Identities=22%  Similarity=0.216  Sum_probs=250.7

Q ss_pred             cceeeEEEEecCCC-CeEEEEeec----CCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcce--eEEEEEe
Q 017201            6 AITCKAVVCWGLGE-PLKVEEIQV----EPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEG--VGVVESA   76 (375)
Q Consensus         6 ~~~~~a~~~~~~~~-~l~~~~~~~----p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~--~G~Vv~v   76 (375)
                      ...+|+++...+.. .|++++.++    |+|++|||||||+|+++|+.|++ ..|.... ...|.++|+++  .|.+..+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v   84 (338)
T cd08295           5 QVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVV   84 (338)
T ss_pred             EEEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEE
Confidence            34567777655543 488888877    88999999999999999999999 7774332 34578889865  3455557


Q ss_pred             CCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeec-cc
Q 017201           77 GDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NY  155 (375)
Q Consensus        77 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~  155 (375)
                      |++++++++||+|+..                                                  |+|+||+++++ ..
T Consensus        85 ~~~v~~~~vGd~V~~~--------------------------------------------------g~~aey~~v~~~~~  114 (338)
T cd08295          85 DSGNPDFKVGDLVWGF--------------------------------------------------TGWEEYSLIPRGQD  114 (338)
T ss_pred             ecCCCCCCCCCEEEec--------------------------------------------------CCceeEEEecchhc
Confidence            8888899999999721                                                  28999999999 79


Q ss_pred             EEEcC-CCCCcc-cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          156 VVKVD-PSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       156 ~~~lp-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      ++++| +++++. +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus       115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~  193 (338)
T cd08295         115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK  193 (338)
T ss_pred             eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            99995 578876 788899999999999878889999999999998 9999999999999999 8999999999999999


Q ss_pred             h-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccc-----cchHH
Q 017201          233 A-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV-----PLNVI  306 (375)
Q Consensus       233 ~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-----~~~~~  306 (375)
                      + +|++.++++.+  +.++.+.++++++ .++|++||++|+. .+..++++++++ |+++.+|.......     ..+..
T Consensus       194 ~~lGa~~vi~~~~--~~~~~~~i~~~~~-~gvd~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~  268 (338)
T cd08295         194 NKLGFDDAFNYKE--EPDLDAALKRYFP-NGIDIYFDNVGGK-MLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLL  268 (338)
T ss_pred             HhcCCceeEEcCC--cccHHHHHHHhCC-CCcEEEEECCCHH-HHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHH
Confidence            8 99999998654  1467777877776 5899999999985 889999999998 99999986543111     12345


Q ss_pred             HhhcCCceEEEEeeccccC--CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          307 ALACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .+..+++++.++.......  ...+.++++++.++++++.  +...|+++++++|++.+++++. +|+|+++
T Consensus       269 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         269 NIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            5666888888765433211  1236778899999999864  4557999999999999988776 5999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=4.8e-39  Score=302.09  Aligned_cols=327  Identities=29%  Similarity=0.470  Sum_probs=272.7

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 017201           10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDI   88 (375)
Q Consensus        10 ~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~   88 (375)
                      ||+++.+++..+++++.|.|.+.+++++|++.++++|++|++ +.+..+...+|.++|||++|+|+++|+++..+++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            688898887679999999999999999999999999999999 8776654557889999999999999999999999999


Q ss_pred             EEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc
Q 017201           89 VIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD  167 (375)
Q Consensus        89 V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~  167 (375)
                      |++.+. .+|+.|++|++++.++|++....  ++..+                  |+|++|+.++.+.++++|+++++.+
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~~p~~~~~~~  140 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT--GYTTQ------------------GGYAEYMVADAEYTVLLPDGLPLAQ  140 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCcccc--CcccC------------------CccccEEEEcHHHeEECCCCCCHHH
Confidence            987654 78999999999999999986542  32223                  3899999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ++.+++.+.+||+++.. .+++++++|||+|+|.+|++++++|+..|+ +|+++++++++.++++++|++.+++...   
T Consensus       141 ~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---  215 (330)
T cd08245         141 AAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA---  215 (330)
T ss_pred             hhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---
Confidence            99999999999998754 789999999999888899999999999999 8999999999999999999988887654   


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKS  327 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (375)
                      .+....    .. .++|++||++++...+..++++++++ |+++.++........++...+..++.++.++....   ..
T Consensus       216 ~~~~~~----~~-~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  286 (330)
T cd08245         216 ELDEQA----AA-GGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RA  286 (330)
T ss_pred             cchHHh----cc-CCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HH
Confidence            333222    22 37999999988766889999999998 99999986543333333445666888888775432   34


Q ss_pred             CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          328 DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      .+..+++++.++.+++   ..+.++++++.++++.+.+++. .|+|+
T Consensus       287 ~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         287 DLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            6778889999999874   3468999999999999988776 47764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.9e-39  Score=296.78  Aligned_cols=301  Identities=25%  Similarity=0.413  Sum_probs=256.0

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+++ +.+++++++.|++.+++|+||+.++++|++|++ ..+.......|.++|+|++|+|+.+|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            5788888755 359999999999999999999999999999998 77765434457899999999999999999999999


Q ss_pred             CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      |+|+..+. .+|+.|++|.++..+.|+..+.  +|...+                  |+|++|+.++.+.++++|+++++
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------------g~~~~~~~v~~~~~~~lp~~~~~  140 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQAD------------------GGFAEYVLVPEESLHELPENLSL  140 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCce--eeecCC------------------CceEEEEEcchHHeEECcCCCCH
Confidence            99998774 7899999999999999987532  232222                  49999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHhhhcCCcEEeCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID--KNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~--~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++ ++..+.+||+++...+++++|++|||.|+|.+|++++|+|+..|+ +|+++.  +++++.++++++|++.+ +..
T Consensus       141 ~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~  217 (306)
T cd08258         141 EAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGG  217 (306)
T ss_pred             HHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCC
Confidence            9887 666888999998888899999999998889999999999999999 787763  34567788899999877 776


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      .   .++...+.++..++++|++||++|+...+..++++++++ |+++.+|........++...++++++++.|+..++ 
T Consensus       218 ~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~-  292 (306)
T cd08258         218 E---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST-  292 (306)
T ss_pred             c---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc-
Confidence            5   678888888777778999999998766889999999998 99999998754456777778878999999987653 


Q ss_pred             cCCCCHHHHHHHHHcC
Q 017201          324 KTKSDLPTLLDKCKNK  339 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~  339 (375)
                        +++++++++++++|
T Consensus       293 --~~~~~~~~~~~~~~  306 (306)
T cd08258         293 --PASWETALRLLASG  306 (306)
T ss_pred             --hHhHHHHHHHHhcC
Confidence              56799999998765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.2e-38  Score=301.13  Aligned_cols=299  Identities=21%  Similarity=0.215  Sum_probs=233.8

Q ss_pred             CeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-cc---CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeecc
Q 017201           20 PLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CS---EGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYI   94 (375)
Q Consensus        20 ~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~---g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   94 (375)
                      .+++++.|.|+| +++||+|||.|+|||+.|.. ..   +......+|.++|||++|+|+++|++++.+++||+|+... 
T Consensus        22 ~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-  100 (345)
T cd08293          22 NFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-  100 (345)
T ss_pred             ceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC-
Confidence            388899999987 49999999999999999864 32   2111235678999999999999999999999999997321 


Q ss_pred             CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccc----ccc
Q 017201           95 GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD----ASF  170 (375)
Q Consensus        95 ~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~----aa~  170 (375)
                                                                      ++|+||++++++.++++|+++++.+    +++
T Consensus       101 ------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~  132 (345)
T cd08293         101 ------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA  132 (345)
T ss_pred             ------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence                                                            2799999999999999999865443    455


Q ss_pred             cccchhhhhhhhhhhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCC
Q 017201          171 LSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEP  246 (375)
Q Consensus       171 l~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~  246 (375)
                      ++.++.|||+++.+.+++++|  ++|||+|+ |++|++++|+|++.|+.+|+++++++++.+++++ +|++.++++.+  
T Consensus       133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--  210 (345)
T cd08293         133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--  210 (345)
T ss_pred             cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--
Confidence            677899999988778888877  99999998 9999999999999998679999999999999876 99999998876  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC--cc----ccchH--HHhh-cCCceEEE
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD--AM----VPLNV--IALA-CGGRTLKG  317 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~----~~~~~--~~~~-~~~~~~~~  317 (375)
                       .++.+.++++++ +++|++||++|+. .+..++++++++ |+++.+|....  ..    ..+++  ..+. .+++++..
T Consensus       211 -~~~~~~i~~~~~-~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (345)
T cd08293         211 -DNVAERLRELCP-EGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRER  286 (345)
T ss_pred             -CCHHHHHHHHCC-CCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEE
Confidence             678888888876 5899999999987 679999999998 99999985321  11    11111  1121 23444333


Q ss_pred             Eeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          318 TTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       318 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .......  ..+.++++++++.++++++.  ....++++++++|++.+.+++. +|+|+++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         287 FLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             EEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            2211110  01235667889999999864  4456799999999999988776 5999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.2e-38  Score=299.15  Aligned_cols=304  Identities=22%  Similarity=0.201  Sum_probs=245.7

Q ss_pred             eeeEEEEecC--CC----CeEEEEeecCCCCCCeEEEEEeeeecCCCcccccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 017201            8 TCKAVVCWGL--GE----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         8 ~~~a~~~~~~--~~----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      .|||+++...  +.    .+++++.+.|+|+++||+|||.++++|+.|.++...  ...+|.++|+|++|+|++   .++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~~~~p~v~G~e~~G~V~~---~~~   76 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--LNEGDTMIGTQVAKVIES---KNS   76 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--CCCCCcEecceEEEEEec---CCC
Confidence            5888888772  32    388899999999999999999999999988652211  124688999999999985   456


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc---cEEE
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN---YVVK  158 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~  158 (375)
                      .+++||+|+..                                                  ++|++|+.++.+   .+++
T Consensus        77 ~~~~Gd~V~~~--------------------------------------------------~~~~~~~~~~~~~~~~~~~  106 (329)
T cd08294          77 KFPVGTIVVAS--------------------------------------------------FGWRTHTVSDGKDQPDLYK  106 (329)
T ss_pred             CCCCCCEEEee--------------------------------------------------CCeeeEEEECCccccceEE
Confidence            79999999732                                                  178999999999   9999


Q ss_pred             cCCCCC--c---ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          159 VDPSID--P---SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       159 lp~~~~--~---~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      +|++++  .   ..+++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++
T Consensus       107 iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~  185 (329)
T cd08294         107 LPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLK  185 (329)
T ss_pred             CCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            999998  2   2234678899999999888889999999999986 9999999999999999 8999999999999999


Q ss_pred             hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-c-----ccchHH
Q 017201          233 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-M-----VPLNVI  306 (375)
Q Consensus       233 ~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~-----~~~~~~  306 (375)
                      ++|++.++++++   .++.+.++++++ .++|++||++|+. .+..++++++++ |+++.+|..... .     ......
T Consensus       186 ~~Ga~~vi~~~~---~~~~~~v~~~~~-~gvd~vld~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~  259 (329)
T cd08294         186 ELGFDAVFNYKT---VSLEEALKEAAP-DGIDCYFDNVGGE-FSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQE  259 (329)
T ss_pred             HcCCCEEEeCCC---ccHHHHHHHHCC-CCcEEEEECCCHH-HHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHH
Confidence            999999999887   678888888776 4899999999985 889999999998 999999854321 1     122233


Q ss_pred             HhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          307 ALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .+..+++++.++....+.  ....+.+++++++++++++.  ....++++++++|++.+.+++. +|+|+++
T Consensus       260 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         260 TIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            456688888886543221  11235678889999999865  3456899999999999988776 5999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=3e-38  Score=296.13  Aligned_cols=292  Identities=19%  Similarity=0.200  Sum_probs=236.6

Q ss_pred             CeEEEEeecCCCCCCeEEEEEeeeecCCCcccccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCC
Q 017201           20 PLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKE   99 (375)
Q Consensus        20 ~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~   99 (375)
                      .+++++.+.|+|++|||+|||.++++|+.|..  |.++....|.++|+|++|+|+++|+   .+++||+|+..       
T Consensus        18 ~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~--g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------   85 (325)
T TIGR02825        18 DFELKTVELPPLNNGEVLLEALFLSVDPYMRV--AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------   85 (325)
T ss_pred             ceEEEeccCCCCCCCcEEEEEEEEecCHHHhc--ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence            38889999999999999999999999997665  2222233478999999999999874   59999999732       


Q ss_pred             CchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc----CCCCCcccc-cccccc
Q 017201          100 CENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV----DPSIDPSDA-SFLSCG  174 (375)
Q Consensus       100 c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l----p~~~~~~~a-a~l~~~  174 (375)
                                                                 ++|++|+.++.+.+.++    |++++++++ ++++++
T Consensus        86 -------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~  122 (325)
T TIGR02825        86 -------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMP  122 (325)
T ss_pred             -------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccH
Confidence                                                       16899999999988888    899999987 678889


Q ss_pred             hhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHH
Q 017201          175 FTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISEL  253 (375)
Q Consensus       175 ~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~  253 (375)
                      +.|||+++.+.+++++|++|||+|+ |++|++++|+||..|+ +|+++++++++.++++++|++.++++++  .+++.+.
T Consensus       123 ~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~  199 (325)
T TIGR02825       123 GLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEET  199 (325)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHH
Confidence            9999999888899999999999987 9999999999999999 8999999999999999999999998875  1245555


Q ss_pred             HHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc----ccc--chHHHhhcCCceEEEEeeccccC--
Q 017201          254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA----MVP--LNVIALACGGRTLKGTTFGGIKT--  325 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~--  325 (375)
                      ++...+ .++|++||++|+. .+..++++++++ |+++.+|.....    ...  .....+..+++++.++....+..  
T Consensus       200 ~~~~~~-~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  276 (325)
T TIGR02825       200 LKKASP-DGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV  276 (325)
T ss_pred             HHHhCC-CCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence            665554 4899999999987 679999999998 999999865321    111  12334555788888765432211  


Q ss_pred             -CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          326 -KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       326 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                       .+.+.++++++++|++++.  +...|+++++++|++.+.+++. +|+|++
T Consensus       277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence             2357789999999999865  4567899999999999988776 598874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=6.4e-38  Score=295.77  Aligned_cols=315  Identities=29%  Similarity=0.365  Sum_probs=259.4

Q ss_pred             eeEEEEecCCCC---eEEEEeecCCCCC-CeEEEEEeeeecCCCccc-ccCCCCC-CC----CCcccCcceeEEEEEeCC
Q 017201            9 CKAVVCWGLGEP---LKVEEIQVEPPKS-TEVRVKMLYASVCHTDIL-CSEGFPA-PL----YPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         9 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~ev~V~v~~~~i~~~D~~-~~g~~~~-~~----~p~i~G~e~~G~Vv~vG~   78 (375)
                      |||+++...+.+   +.+++.|.|+|.+ ++|+||+.++++|++|++ +.|..+. ..    +|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            789999988865   8999999998887 999999999999999999 8776543 12    677999999999999999


Q ss_pred             CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201           79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK  158 (375)
Q Consensus        79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  158 (375)
                      +++.+++||+|+....                                              +.|+|++|+.++.+.+++
T Consensus        81 ~v~~~~~Gd~V~~~~~----------------------------------------------~~g~~~~~~~v~~~~~~~  114 (341)
T cd08290          81 GVKSLKPGDWVIPLRP----------------------------------------------GLGTWRTHAVVPADDLIK  114 (341)
T ss_pred             CCCCCCCCCEEEecCC----------------------------------------------CCccchheEeccHHHeEe
Confidence            9999999999985421                                              114899999999999999


Q ss_pred             cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHhhh
Q 017201          159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP----WKKEKGKA  233 (375)
Q Consensus       159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~----~~~~~~~~  233 (375)
                      +|+++++++++.+++.+.|||+++.....+++|++|||+|+ |++|++++|+|++.|+ +|+++++++    ++.+.+++
T Consensus       115 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~  193 (341)
T cd08290         115 VPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKA  193 (341)
T ss_pred             CCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHh
Confidence            99999999999999999999998877788999999999987 9999999999999999 788887765    66788889


Q ss_pred             cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCc
Q 017201          234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR  313 (375)
Q Consensus       234 lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  313 (375)
                      +|++.++++++....++...++.+.++ ++|++||++|+. .+..++++++++ |+++.+|........+++..++.+++
T Consensus       194 ~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  270 (341)
T cd08290         194 LGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQPVTVPTSLLIFKDI  270 (341)
T ss_pred             cCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCCCcccCHHHHhhCCc
Confidence            999999887651001677778877777 899999999987 677899999997 99999985543334556655566899


Q ss_pred             eEEEEeeccccC---C----CCHHHHHHHHHcCCCCCCcceeeEe---ecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          314 TLKGTTFGGIKT---K----SDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       314 ~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ++.+........   .    ..+..+++++.++++++.  ....+   ++++++++++.+.+++. .|+|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         271 TLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             eEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            999876543211   1    136778888999998754  34456   99999999999987766 4999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.2e-37  Score=289.93  Aligned_cols=331  Identities=26%  Similarity=0.349  Sum_probs=271.5

Q ss_pred             eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLG--EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~--~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++...+  +.+++++.+.|.++++|++|++.++++|++|++ ..|..+. ...|.++|||++|+|+++|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7899998664  458888888888899999999999999999999 7776543 34688999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|++.+...|+.|..|      .|....  ..|...+                  |+|++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~--~~~~~~~------------------g~~~~~~~~~~~~~~~lp~~~~  134 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPPT------AEDEAS--ALGGPID------------------GVLAEYVVLPEEGLVRAPDHLS  134 (336)
T ss_pred             CCCEEEEeccccccccccc------cccccc--ccccccC------------------ceeeeEEEecHHHeEECCCCCC
Confidence            9999998776666554433      332211  1122222                  4899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +.+++.+++.+.+||+++.+.+.+++|++|+|+|+|++|++++++|++.|+ +|+++++++++.++++++|.+.+++.+.
T Consensus       135 ~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~  213 (336)
T cd08276         135 FEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT  213 (336)
T ss_pred             HHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc
Confidence            999999999999999988777899999999999889999999999999999 8999999999999999999988887653


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                        ..++.+.+++.+++.++|++||+++.. .+..++++++++ |+++.+|.........+...++.+++++.+.....  
T Consensus       214 --~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  287 (336)
T cd08276         214 --TPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS--  287 (336)
T ss_pred             --ccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc--
Confidence              145777888888877999999999865 788999999998 99999987654333455566667999999876542  


Q ss_pred             CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                       ...+.++++++.++.+.+.  ..+.+++++++++++.+.+++. .|+++++
T Consensus       288 -~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         288 -RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             -HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence             3567888899988887643  5678999999999999987766 4888864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=7.3e-38  Score=293.71  Aligned_cols=316  Identities=23%  Similarity=0.266  Sum_probs=257.0

Q ss_pred             eeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            8 TCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         8 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      +||++++.+++.+  +++++++.|+++++||+||+.++++|++|++ ..+.++...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            5899999887653  8888999999999999999999999999999 777765555788999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+....                                              +.|+|++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~----------------------------------------------~~g~~~~~v~v~~~~~~~lp~~~~  114 (327)
T PRK10754         81 VGDRVVYAQS----------------------------------------------ALGAYSSVHNVPADKAAILPDAIS  114 (327)
T ss_pred             CCCEEEECCC----------------------------------------------CCcceeeEEEcCHHHceeCCCCCC
Confidence            9999973210                                              113899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +++++.+++.+.+||.++...+.+++|++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++.+++.+
T Consensus       115 ~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  193 (327)
T PRK10754        115 FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYR  193 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCC
Confidence            99999988899999998877788999999999976 9999999999999999 899999999999999999998888877


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE-EEee-c
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK-GTTF-G  321 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-~  321 (375)
                      +   .++.+.+++.+++.++|++||++++. .+..++++++++ |+++.+|........++...+..++..+. .... .
T Consensus       194 ~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (327)
T PRK10754        194 E---ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR-GLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQG  268 (327)
T ss_pred             C---CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC-CEEEEEccCCCCCCCcCHHHHhccCceEEecceeec
Confidence            6   67888888888888999999999985 788899999998 99999986643222333333332222111 1111 1


Q ss_pred             cccCC----CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          322 GIKTK----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       322 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .....    ..+..+++++.++++++.....+.|++++++++++.+.+++. .|+||..
T Consensus       269 ~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        269 YITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            01111    123457889999999865555789999999999999988776 5999863

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.3e-37  Score=292.98  Aligned_cols=308  Identities=19%  Similarity=0.211  Sum_probs=247.1

Q ss_pred             eEEEEecC---CC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201           10 KAVVCWGL---GE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus        10 ~a~~~~~~---~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      ||+++.++   +.  .++++++|.|+|+++||+|||.++++|++|++ +.+..+...+|.++|+|++|+|+++|++++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            56777775   43  37778889999999999999999999999998 77765555678899999999999999999999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      ++||+|+....                          ...                  .|+|++|++++++.++++|+++
T Consensus        81 ~~Gd~V~~~~~--------------------------~~~------------------~g~~~~~~~v~~~~~~~ip~~~  116 (336)
T TIGR02817        81 KPGDEVWYAGD--------------------------IDR------------------PGSNAEFHLVDERIVGHKPKSL  116 (336)
T ss_pred             CCCCEEEEcCC--------------------------CCC------------------CCcccceEEEcHHHcccCCCCC
Confidence            99999984310                          001                  1489999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCC-----CCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      ++++++.+++++.|||+++...+++++     |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++++|+
T Consensus       117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~  195 (336)
T TIGR02817       117 SFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGA  195 (336)
T ss_pred             CHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCC
Confidence            999999999999999999877788877     999999987 99999999999998 98 89999999999999999999


Q ss_pred             cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201          237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK  316 (375)
Q Consensus       237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  316 (375)
                      +.++++..    ++.+.+++. .++++|+++|++++...+..++++++++ |+++.++..    ..++...+..+++++.
T Consensus       196 ~~~~~~~~----~~~~~i~~~-~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~----~~~~~~~~~~~~~~~~  265 (336)
T TIGR02817       196 HHVIDHSK----PLKAQLEKL-GLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP----AELDISPFKRKSISLH  265 (336)
T ss_pred             CEEEECCC----CHHHHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc----ccccchhhhhcceEEE
Confidence            99887543    566777775 3448999999987666889999999997 999988532    2445555554667666


Q ss_pred             EEeec--cccC-------CCCHHHHHHHHHcCCCCCCcceeeEe---ecccHHHHHHHHcCCCe-eEEEEe
Q 017201          317 GTTFG--GIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       317 ~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      +....  ....       ...+.++++++.++.+++.  +.+.+   +++++++|++.+.+++. .|+|++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       266 WEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             EEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            54322  1100       1236778899999998743  34444   46899999999988776 588874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=4.4e-37  Score=287.77  Aligned_cols=313  Identities=22%  Similarity=0.221  Sum_probs=259.2

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      |||+++.+++.+  +.+++.+.|.+.+++|+|++.++++|++|++ ..|..+   ....|.++|||++|+|+++|+++..
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            689998876543  6667777777889999999999999999998 776543   2456788999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||+|+.....                           .                  .|+|++|++++.+.++++|++
T Consensus        81 ~~~Gd~V~~~~~~---------------------------~------------------~g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08244          81 AWLGRRVVAHTGR---------------------------A------------------GGGYAELAVADVDSLHPVPDG  115 (324)
T ss_pred             CCCCCEEEEccCC---------------------------C------------------CceeeEEEEEchHHeEeCCCC
Confidence            9999999854210                           0                  148999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +++.+++.+++.+.||| ++...++++++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++.+++
T Consensus       116 ~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  193 (324)
T cd08244         116 LDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVD  193 (324)
T ss_pred             CCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            99999999999999995 4667889999999999986 9999999999999999 8999999999999999999988888


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      ..+   .++.+.+.+..+++++|+++|++|+. ....+++++++. |+++.+|........++...++.+++++.+....
T Consensus       194 ~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (324)
T cd08244         194 YTR---PDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEWTALDEDDARRRGVTVVGLLGV  268 (324)
T ss_pred             cCC---ccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCCCccCHHHHhhCCcEEEEeecc
Confidence            776   67788888888877899999999987 678999999997 9999998765433355655556688998877643


Q ss_pred             cccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          322 GIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       322 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ....   .+.+.++++++.++++++  ++...++++++++|++.+.+++. .|+|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         269 QAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            2211   234666888899998874  46778999999999999988766 4998864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-37  Score=289.76  Aligned_cols=312  Identities=29%  Similarity=0.340  Sum_probs=258.8

Q ss_pred             eeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            8 TCKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         8 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      ||||+++.+.+.  .+++++.+.|++.++|++|||.++++|+.|+. ..+..+ ....|.++|||++|+|+++|+++..+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            699999998775  37777888888899999999999999999998 777553 23456789999999999999999999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      ++||+|+...                             .+                  |+|++|++++.+.++++|+++
T Consensus        81 ~~Gd~V~~~~-----------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~  113 (334)
T PTZ00354         81 KEGDRVMALL-----------------------------PG------------------GGYAEYAVAHKGHVMHIPQGY  113 (334)
T ss_pred             CCCCEEEEec-----------------------------CC------------------CceeeEEEecHHHcEeCCCCC
Confidence            9999997431                             11                  389999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +..+++.+++++.+||+++...+.+++|++|||+|+ |++|++++++|++.|+ +++.+++++++.+.++++|++.+++.
T Consensus       114 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  192 (334)
T PTZ00354        114 TFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRY  192 (334)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            999999999999999998877788999999999997 9999999999999999 77788889999999999999888887


Q ss_pred             CCCCccc-HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc-chHHHhhcCCceEEEEee
Q 017201          243 DDEPNKS-ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP-LNVIALACGGRTLKGTTF  320 (375)
Q Consensus       243 ~~~~~~~-~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~  320 (375)
                      ..   .+ +.+.+++.++++++|++||++++. .+..++++++++ |+++.+|........ ++...+..+..++.++..
T Consensus       193 ~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (334)
T PTZ00354        193 PD---EEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVD-GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL  267 (334)
T ss_pred             CC---hhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccC-CeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence            65   44 778888888777999999999875 889999999997 999999865432322 666666667778888754


Q ss_pred             ccccCC-------CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          321 GGIKTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       321 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      ......       ..++.+++++.++.+++  ++.+.+++++++++++.+.+++. .|+|+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~  327 (334)
T PTZ00354        268 RSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLT  327 (334)
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            431110       12356778888898874  36778999999999999987765 588885

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=1.2e-36  Score=284.86  Aligned_cols=313  Identities=21%  Similarity=0.255  Sum_probs=246.6

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++..+++  ++++++.|.|.++++||+|++.++++|++|+. +.|..+. +.+|.++|||++|+|+++  +++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            78999998886  69999999999999999999999999999999 8776543 345789999999999998  456799


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+..                       .|+..+                  |+|++|++++++.++++|++++
T Consensus        79 ~Gd~V~~~~~~-----------------------~g~~~~------------------g~~~~~~~v~~~~~~~lp~~~~  117 (325)
T cd05280          79 EGDEVLVTGYD-----------------------LGMNTD------------------GGFAEYVRVPADWVVPLPEGLS  117 (325)
T ss_pred             CCCEEEEcccc-----------------------cCCCCC------------------ceeEEEEEEchhhEEECCCCCC
Confidence            99999864310                       122222                  3999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhc--CCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          165 PSDASFLSCGFTTGYGAAWKEA--KVE-KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~--~~~-~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      +++++.+++.+.+||.++....  ++. .+++|||+|+ |++|++++++|+..|+ +|+++++++++++.++++|++.++
T Consensus       118 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  196 (325)
T cd05280         118 LREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVL  196 (325)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence            9999999999999998875443  335 3579999998 9999999999999999 799999999999999999999888


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      +.++   .  ...+.+...++++|++||++++. .+..+++++++. |+++.+|........+++..++.+++++.+...
T Consensus       197 ~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (325)
T cd05280         197 DRED---L--LDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYG-GVVASCGNAAGPELTTTVLPFILRGVSLLGIDS  269 (325)
T ss_pred             cchh---H--HHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCC-CEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence            7654   2  22333334444799999999986 889999999997 999999876533335566666568999888765


Q ss_pred             ccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          321 GGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       321 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .....   ...+..+.+++..+..   +.+..++++++++++++.+.+++. +|+|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         270 VNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             ecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            43211   0112334444445522   236779999999999999988877 5999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=2.1e-36  Score=284.00  Aligned_cols=309  Identities=24%  Similarity=0.276  Sum_probs=253.9

Q ss_pred             eeeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 017201            8 TCKAVVCWGLGE----PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         8 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      +|||+++.+++.    ++++++++.|.+.++|++||+.++++|++|++ ..|.++. ..+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            589999987665    58899999999999999999999999999999 7776543 45788999999999999999999


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      .+++||+|+...                                                .|+|++|++++.+.++++|+
T Consensus        81 ~~~~Gd~V~~~~------------------------------------------------~g~~~s~~~v~~~~~~~ip~  112 (329)
T cd08250          81 DFKVGDAVATMS------------------------------------------------FGAFAEYQVVPARHAVPVPE  112 (329)
T ss_pred             CCCCCCEEEEec------------------------------------------------CcceeEEEEechHHeEECCC
Confidence            999999998432                                                13899999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      +  +.+++.+++++.|||+++.+..++++|++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.++
T Consensus       113 ~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~  189 (329)
T cd08250         113 L--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPI  189 (329)
T ss_pred             C--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEE
Confidence            7  45677888899999999877788999999999987 9999999999999999 899999999999999999998888


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc----------cccchHHHhhc
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA----------MVPLNVIALAC  310 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~----------~~~~~~~~~~~  310 (375)
                      +..+   .++.+.+....+ +++|++||++|+. .+..++++++++ |+++.+|.....          ...++.. .+.
T Consensus       190 ~~~~---~~~~~~~~~~~~-~~vd~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~  262 (329)
T cd08250         190 NYKT---EDLGEVLKKEYP-KGVDVVYESVGGE-MFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPK-LLA  262 (329)
T ss_pred             eCCC---ccHHHHHHHhcC-CCCeEEEECCcHH-HHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHH-Hhh
Confidence            7665   566666766655 5899999999975 789999999997 999999866431          1123333 344


Q ss_pred             CCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          311 GGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       311 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      +++++.+.......  ....+.++++++.++.+++.....+.++++++++|++.+.+++. .|+|++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         263 KSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             cCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            88888887643221  12346778889999988864334556899999999999987766 488874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=4.6e-36  Score=282.95  Aligned_cols=311  Identities=25%  Similarity=0.311  Sum_probs=248.0

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++++++ +.+++++.+.|+|+++||+|++.++++|++|++ ..+.. ...+|.++|||++|+|+.+|++++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            6899999884 458899999999999999999999999999998 65544 22356789999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|+..+...|+                     +.                  ...|+|++|+.++.+.++++|++++++
T Consensus        80 d~V~~~~~~~~~---------------------~~------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~  120 (339)
T cd08249          80 DRVAGFVHGGNP---------------------ND------------------PRNGAFQEYVVADADLTAKIPDNISFE  120 (339)
T ss_pred             CEEEEEeccccC---------------------CC------------------CCCCcccceEEechhheEECCCCCCHH
Confidence            999976543221                     11                  112499999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCC----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKV----------EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      +++.+++.+.|||+++.+..++          +++++|||+|+ |++|++++++|+..|+ +|+++. ++++.+.++++|
T Consensus       121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g  198 (339)
T cd08249         121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG  198 (339)
T ss_pred             HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence            9999999999999987665544          79999999998 9999999999999999 888887 568999999999


Q ss_pred             CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhccc--CCeEEEEEccCCCccccchHHHhhcCCc
Q 017201          236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV--GKGKVIVIGVGVDAMVPLNVIALACGGR  313 (375)
Q Consensus       236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~  313 (375)
                      ++.+++..+   .++.+.++++++ .++|++||++|++..+..+++++++  + |+++.+|...... .+      ..+.
T Consensus       199 ~~~v~~~~~---~~~~~~l~~~~~-~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~-~~------~~~~  266 (339)
T cd08249         199 ADAVFDYHD---PDVVEDIRAATG-GKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET-EP------RKGV  266 (339)
T ss_pred             CCEEEECCC---chHHHHHHHhcC-CCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc-cC------CCCc
Confidence            999988876   678888887776 4899999999985588999999999  8 9999998665311 01      1222


Q ss_pred             eEEEEeeccc---------cCCCCHHHHHHHHHcCCCCCCcceeeEee--cccHHHHHHHHcCCC-e-eEEEEeC
Q 017201          314 TLKGTTFGGI---------KTKSDLPTLLDKCKNKEFKLHQLLTHHVK--LEEIDKAIQLLKQPD-C-VKVLITI  375 (375)
Q Consensus       314 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~-~-~kvvi~~  375 (375)
                      ++........         .....+..+++++.++++.+.+  ...++  ++++++|++.+.+++ . .|+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         267 KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             eEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            2222211111         1112356688889999988653  34566  999999999998887 5 5999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-35  Score=276.53  Aligned_cols=300  Identities=25%  Similarity=0.329  Sum_probs=247.4

Q ss_pred             CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-c-cCCCCC--CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccC
Q 017201           20 PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-C-SEGFPA--PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIG   95 (375)
Q Consensus        20 ~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~-~g~~~~--~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   95 (375)
                      .+++++++.|++.++||+|++.++++|++|++ + .+..+.  +.+|.++|+|++|+|+++|++++.+++||+|+..+  
T Consensus         6 ~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--   83 (312)
T cd08269           6 RFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--   83 (312)
T ss_pred             eeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence            48999999999999999999999999999998 7 665421  23578999999999999999999999999998542  


Q ss_pred             CCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccch
Q 017201           96 ECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF  175 (375)
Q Consensus        96 ~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~  175 (375)
                                                                    .|+|++|+.++++.++++|+++  ..++....++
T Consensus        84 ----------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~  115 (312)
T cd08269          84 ----------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPL  115 (312)
T ss_pred             ----------------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhH
Confidence                                                          1389999999999999999998  2333222678


Q ss_pred             hhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHH
Q 017201          176 TTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK  255 (375)
Q Consensus       176 ~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~  255 (375)
                      ++|++++. .+++++|++|||+|+|.+|++++++|+..|+.+|+++++++++.++++++|++.+++.+.   .++.+.+.
T Consensus       116 ~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~  191 (312)
T cd08269         116 GCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIVERVR  191 (312)
T ss_pred             HHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHH
Confidence            88888765 788999999999988999999999999999933999999999999999999988888765   67888888


Q ss_pred             hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc-cCCCCHHHHHH
Q 017201          256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI-KTKSDLPTLLD  334 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  334 (375)
                      +++++.++|++||++|+...+..++++++++ |+++.+|........+++..+..+++++.++..... ...+.++.+++
T Consensus       192 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (312)
T cd08269         192 ELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVK  270 (312)
T ss_pred             HHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHH
Confidence            8888789999999998776789999999997 999999865433455566666668888776643221 11246888999


Q ss_pred             HHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe--eEEEEe
Q 017201          335 KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC--VKVLIT  374 (375)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvi~  374 (375)
                      +++++++++...+.+.+++++++++++.+.+++.  +|+++.
T Consensus       271 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  312 (312)
T cd08269         271 LIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVIV  312 (312)
T ss_pred             HHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999998865456778999999999999988764  698873

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.2e-36  Score=282.86  Aligned_cols=299  Identities=28%  Similarity=0.414  Sum_probs=227.6

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-C---CCCcccCcceeEEE---EEeC-CCCCCCCCCCEEEe
Q 017201           21 LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-P---LYPRVLGHEGVGVV---ESAG-DEVKEVKEGDIVIP   91 (375)
Q Consensus        21 l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~---~~p~i~G~e~~G~V---v~vG-~~v~~~~~Gd~V~~   91 (375)
                      ...++.++|.|.+++++|++.++++|+.|+. ..|.... +   .+|.+++.++.|.+   ...| ..+..+..||.++.
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            5557899999999999999999999999999 7777654 3   47766555555553   3334 22334555555542


Q ss_pred             eccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccccc
Q 017201           92 TYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFL  171 (375)
Q Consensus        92 ~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l  171 (375)
                                                   ...+                  |+|+||+.+++..++++|+++++.+||++
T Consensus       100 -----------------------------~~~~------------------g~~aey~v~p~~~~~~~P~~l~~~~aa~~  132 (347)
T KOG1198|consen  100 -----------------------------FLSS------------------GGLAEYVVVPEKLLVKIPESLSFEEAAAL  132 (347)
T ss_pred             -----------------------------ccCC------------------CceeeEEEcchhhccCCCCccChhhhhcC
Confidence                                         1222                  49999999999999999999999999999


Q ss_pred             ccchhhhhhhhhhhc------CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          172 SCGFTTGYGAAWKEA------KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       172 ~~~~~ta~~~l~~~~------~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      |.++.|||.++...+      ++++|++|||+|+ |++|++|+|+|++.|+ ..++++.++++.++++++|++.++|+++
T Consensus       133 p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~  211 (347)
T KOG1198|consen  133 PLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD  211 (347)
T ss_pred             chHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC
Confidence            999999999999998      8999999999977 9999999999999996 4555556899999999999999999998


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhh--cCCce-----EEE
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA--CGGRT-----LKG  317 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~--~~~~~-----~~~  317 (375)
                         +++.+.+++.+ +.+||+||||+|+. ....+..++... |+...++..++.....+...++  .+.+.     +.+
T Consensus       212 ---~~~~e~~kk~~-~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
T KOG1198|consen  212 ---ENVVELIKKYT-GKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG  285 (347)
T ss_pred             ---HHHHHHHHhhc-CCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence               89999999988 66999999999997 667888888886 7655555444311111111000  01111     111


Q ss_pred             Eeec---cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          318 TTFG---GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       318 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..+.   .....+.+..+.+++++++++  +.+.+.||++++.+|++.+.++.. +|+++.+
T Consensus       286 ~~~~~~~~~~~~~~l~~l~~~ie~gkik--p~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  286 VNYRWLYFVPSAEYLKALVELIEKGKIK--PVIDSVYPFSQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             cceeeeeecCCHHHHHHHHHHHHcCccc--CCcceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence            1110   012234578899999999877  558999999999999999987555 6998864

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=9.2e-36  Score=279.25  Aligned_cols=314  Identities=20%  Similarity=0.219  Sum_probs=242.3

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++...+.+  +.+++.|.|.|+++||+||+.++++|++|+. ..+.. ....+|.++|||++|+|+++|  +..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            789999887763  8889999999999999999999999999987 54321 123458899999999999964  56799


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+..                       .|...+                  |+|++|++++++.++++|++++
T Consensus        79 ~Gd~V~~~~~~-----------------------~~~~~~------------------g~~~~~~~v~~~~~~~~p~~~~  117 (326)
T cd08289          79 PGDEVIVTSYD-----------------------LGVSHH------------------GGYSEYARVPAEWVVPLPKGLT  117 (326)
T ss_pred             CCCEEEEcccc-----------------------cCCCCC------------------CcceeEEEEcHHHeEECCCCCC
Confidence            99999865321                       121122                  4999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhh--cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          165 PSDASFLSCGFTTGYGAAWKE--AKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~--~~~-~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      +++++.+++.+.||+.++...  .++ ..+++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++
T Consensus       118 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~  196 (326)
T cd08289         118 LKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVI  196 (326)
T ss_pred             HHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEE
Confidence            999999999999998876432  233 34789999998 9999999999999999 899999999999999999998888


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      +.++   . ..+.++++. +.++|++||++|+. .+..++++++++ |+++.+|.......++++..++.+++++.+...
T Consensus       197 ~~~~---~-~~~~~~~~~-~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (326)
T cd08289         197 PREE---L-QEESIKPLE-KQRWAGAVDPVGGK-TLAYLLSTLQYG-GSVAVSGLTGGGEVETTVFPFILRGVNLLGIDS  269 (326)
T ss_pred             cchh---H-HHHHHHhhc-cCCcCEEEECCcHH-HHHHHHHHhhcC-CEEEEEeecCCCCCCcchhhhhhccceEEEEEe
Confidence            8765   2 345556664 45899999999985 889999999998 999999976433344446666668999988753


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCC---CcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKL---HQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ... .......+++.+.. .+.+   ...+.++++++++++|++.+.+++. .|+|+++
T Consensus       270 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         270 VEC-PMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             Eec-CchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            211 01122333333322 2221   1235789999999999999988877 4998864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.3e-35  Score=277.80  Aligned_cols=299  Identities=25%  Similarity=0.348  Sum_probs=253.5

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCC
Q 017201           21 LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECK   98 (375)
Q Consensus        21 l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~   98 (375)
                      +.+++.+.|++.+++|+||+.++++|+.|+. +.+..+. +.+|.++|||++|+|+++|++++.+++||+|+..+.    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            6677888888999999999999999999998 7665532 356789999999999999999999999999985431    


Q ss_pred             CCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhh
Q 017201           99 ECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG  178 (375)
Q Consensus        99 ~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta  178 (375)
                                                                 .|+|++|+.++.+.++++|+++++.+++.+++.+.+|
T Consensus        90 -------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta  126 (323)
T cd05282          90 -------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTA  126 (323)
T ss_pred             -------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHH
Confidence                                                       1389999999999999999999999999999999999


Q ss_pred             hhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhh
Q 017201          179 YGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       179 ~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      |+++.....+.+|++|||+|+ |++|++++++|+.+|+ +|+++.+++++.+.++++|++.+++..+   .++...+.++
T Consensus       127 ~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~  202 (323)
T cd05282         127 WLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEA  202 (323)
T ss_pred             HHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHH
Confidence            998877778899999999988 9999999999999999 8999999999999999999999998876   5788888888


Q ss_pred             cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC-------CCCHH
Q 017201          258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLP  330 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  330 (375)
                      ++++++|++||++|+. ....++++++++ |+++.+|........++...+..+++++.+.....+..       ...+.
T Consensus       203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05282         203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFA  280 (323)
T ss_pred             hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHH
Confidence            8888999999999987 567889999997 99999987653334566666666899998877554321       12466


Q ss_pred             HHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          331 TLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      .+++++.++++.+.  ..+.+++++++++++.+.+++. .|+|++
T Consensus       281 ~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         281 EVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            78888999988743  5788999999999999987766 488763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.7e-35  Score=276.21  Aligned_cols=310  Identities=24%  Similarity=0.362  Sum_probs=248.7

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      ||++++...+.  .+.+++.+.|.++++||+||+.++++|++|++ ..+..+....|.++|||++|+|+++|+  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            68888877663  36777888888899999999999999999999 877665556688999999999999995  57999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||+|++....                       ++...+                  |+|++|+.++++.++++|+++++
T Consensus        79 Gd~V~~~~~~-----------------------~~~~~~------------------g~~~~~~~~~~~~~~~ip~~~~~  117 (320)
T cd08243          79 GQRVATAMGG-----------------------MGRTFD------------------GSYAEYTLVPNEQVYAIDSDLSW  117 (320)
T ss_pred             CCEEEEecCC-----------------------CCCCCC------------------cccceEEEcCHHHcEeCCCCCCH
Confidence            9999865321                       011112                  38999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      ++++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|++.|+ +|+++++++++.+.++++|++.+++. .
T Consensus       118 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~  195 (320)
T cd08243         118 AELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D  195 (320)
T ss_pred             HHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C
Confidence            9999999999999999888788999999999998 9999999999999999 89999999999999999999887754 3


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc--cccchHHHh--hcCCceEEEEee
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA--MVPLNVIAL--ACGGRTLKGTTF  320 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~~~~~~~~--~~~~~~~~~~~~  320 (375)
                         .++.+.++++  +.++|++||++++. .+..++++++++ |+++.+|.....  .........  ..+++++.+...
T Consensus       196 ---~~~~~~i~~~--~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T cd08243         196 ---GAIAEQLRAA--PGGFDKVLELVGTA-TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS  268 (320)
T ss_pred             ---ccHHHHHHHh--CCCceEEEECCChH-HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence               4677777777  45899999999985 789999999997 999999865321  111112221  246777776643


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      ... ....+..++++++++.+++  +..+.++++++++|++.+.+++. .|+|+
T Consensus       269 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         269 GDV-PQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             hhh-hHHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            221 1234677888999998875  35678999999999999987766 47775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4.9e-35  Score=274.04  Aligned_cols=310  Identities=22%  Similarity=0.265  Sum_probs=244.7

Q ss_pred             eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201           10 KAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus        10 ~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      ||+++...+.  .++++++|+|.++++||+||+.++++|++|++ +.|.++. ...|.++|||++|+|+.  ++++.+++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            5788887665  46899999999999999999999999999999 8776532 34588899999999988  56678999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||+|++.+..                       .|...+                  |+|++|+.++.+.++++|+++++
T Consensus        79 Gd~V~~~~~~-----------------------~~~~~~------------------g~~~~~~~~~~~~~~~iP~~~~~  117 (323)
T TIGR02823        79 GDEVIVTGYG-----------------------LGVSHD------------------GGYSQYARVPADWLVPLPEGLSL  117 (323)
T ss_pred             CCEEEEccCC-----------------------CCCCCC------------------ccceEEEEEchhheEECCCCCCH
Confidence            9999865321                       011112                  49999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhh--hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          166 SDASFLSCGFTTGYGAAWK--EAKVEKGS-SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~--~~~~~~g~-~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      ++++.+++.+.+|+.++..  ..++.+|+ +|||+|+ |++|++++++|+++|+ +++++++++++.+.++++|++.+++
T Consensus       118 ~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~  196 (323)
T TIGR02823       118 REAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVID  196 (323)
T ss_pred             HHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEc
Confidence            9999999999999877533  34488999 9999998 9999999999999999 8888888888889999999988887


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      .++   .+.  .++.+..+ ++|+++|++|+. .+..++.+++++ |+++.+|.......+.+...++.+++++.+....
T Consensus       197 ~~~---~~~--~~~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (323)
T TIGR02823       197 RED---LSP--PGKPLEKE-RWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSV  268 (323)
T ss_pred             ccc---HHH--HHHHhcCC-CceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCCCCccccHHHHhhcceEEEEEecc
Confidence            654   222  44555555 599999999987 788999999998 9999999765333444545565688998886533


Q ss_pred             cccCCC----CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEEeC
Q 017201          322 GIKTKS----DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI  375 (375)
Q Consensus       322 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi~~  375 (375)
                      .. ...    .+..+.+++..+.+++  + .+.++++++++|++.+.+++.. |+|+++
T Consensus       269 ~~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       269 YC-PMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             cc-CchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            21 111    2345556666777653  3 4589999999999999888774 998864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1e-35  Score=259.90  Aligned_cols=296  Identities=22%  Similarity=0.265  Sum_probs=241.4

Q ss_pred             CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEe--CCCCCCCCCCCEEEeeccCC
Q 017201           20 PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESA--GDEVKEVKEGDIVIPTYIGE   96 (375)
Q Consensus        20 ~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~v--G~~v~~~~~Gd~V~~~~~~~   96 (375)
                      +|+++++++|+|++||||||+.|.++.| .+. +....+.--.|.-+|...+|.++..  -|+..+|++||.|+...   
T Consensus        26 ~F~lee~~vp~p~~GqvLl~~~ylS~DP-ymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~---  101 (340)
T COG2130          26 DFRLEEVDVPEPGEGQVLLRTLYLSLDP-YMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS---  101 (340)
T ss_pred             CceeEeccCCCCCcCceEEEEEEeccCH-HHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc---
Confidence            4999999999999999999999999998 443 4444332223556676665544332  25677899999997321   


Q ss_pred             CCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccc--ccccc
Q 017201           97 CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS--FLSCG  174 (375)
Q Consensus        97 ~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa--~l~~~  174 (375)
                                                                     +|++|.+++...+.|++++.-+..+.  .+.++
T Consensus       102 -----------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmp  134 (340)
T COG2130         102 -----------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMP  134 (340)
T ss_pred             -----------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhcCCc
Confidence                                                           89999999999999998765444443  36678


Q ss_pred             hhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHH
Q 017201          175 FTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISE  252 (375)
Q Consensus       175 ~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~  252 (375)
                      ..|||.+|.+.+++++|++|+|.+| |++|..+.|+||..|+ +|+.++.++||.+++++ +|.|.++|++.   +++.+
T Consensus       135 G~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~  210 (340)
T COG2130         135 GLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQ  210 (340)
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHH
Confidence            9999999999999999999999988 9999999999999999 99999999999999987 99999999998   79999


Q ss_pred             HHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc------chHHHhhcCCceEEEEeecc-cc-
Q 017201          253 LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP------LNVIALACGGRTLKGTTFGG-IK-  324 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~-  324 (375)
                      .+++.++. |+|+.||++|++ .+...+..|+.. +|++.||.-+.+..+      -.+..++.+.+++.|....+ +. 
T Consensus       211 ~L~~a~P~-GIDvyfeNVGg~-v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~  287 (340)
T COG2130         211 ALKEACPK-GIDVYFENVGGE-VLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ  287 (340)
T ss_pred             HHHHHCCC-CeEEEEEcCCch-HHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence            99999986 999999999998 999999999997 999999976541111      12233556789999987632 21 


Q ss_pred             -CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEEeC
Q 017201          325 -TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI  375 (375)
Q Consensus       325 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi~~  375 (375)
                       ..+..+++..|+++|+|+...  +.+-.||++++||.-+.+++++ |.|+++
T Consensus       288 ~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         288 RFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             hhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEe
Confidence             124467889999999999764  5566899999999999999995 999874

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.1e-35  Score=273.06  Aligned_cols=298  Identities=22%  Similarity=0.279  Sum_probs=242.4

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+.+ ..+.+++.+.|.++++||+||+.++++|++|++ ....    ..|.++|||++|+|+++|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G   76 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG   76 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence            5788887754 126666888889999999999999999999998 5521    235789999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|+...                             .+                  |+|++|+.++.+.++++|++++++
T Consensus        77 d~V~~~~-----------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~~~~  109 (305)
T cd08270          77 ARVVGLG-----------------------------AM------------------GAWAELVAVPTGWLAVLPDGVSFA  109 (305)
T ss_pred             CEEEEec-----------------------------CC------------------cceeeEEEEchHHeEECCCCCCHH
Confidence            9997431                             11                  399999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      +++++++.+.|||+++...... +|++|+|+|+ |++|++++++|+..|+ +|+.+++++++.+.++++|++.+++..+ 
T Consensus       110 ~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-  186 (305)
T cd08270         110 QAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS-  186 (305)
T ss_pred             HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc-
Confidence            9999999999999987655444 6999999998 9999999999999999 8999999999999999999876554322 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhc--CCceEEEEeecc-
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC--GGRTLKGTTFGG-  322 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-  322 (375)
                         +       +.+ .++|+++|++|+. .+..++++++++ |+++.+|........+++..+..  ++.++.+..... 
T Consensus       187 ---~-------~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
T cd08270         187 ---E-------LSG-APVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDG  253 (305)
T ss_pred             ---c-------ccC-CCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccCCCcccccHHHHhcccccceEEEEEccCH
Confidence               1       122 3799999999987 789999999998 99999986643334556666554  588888876442 


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ......+..+++++.++++++.  +.+++++++++++++.+.+++. .|+|+.+
T Consensus       254 ~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         254 EPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            1112457778899999999853  6779999999999999987776 5999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=6.3e-35  Score=274.69  Aligned_cols=312  Identities=22%  Similarity=0.220  Sum_probs=251.7

Q ss_pred             eeEEEEecCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            9 CKAVVCWGLGEP-----LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         9 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      |||+++++++..     ++.++++.|++.+++|+|++.++++|++|++ +.+..+...+|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            579999988753     6667788888899999999999999999999 7776554456778999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||+|+.....                          ..+                  |+|++|+.++.+.++++|++
T Consensus        81 ~~~Gd~V~~~~~~--------------------------~~~------------------g~~~~~~~v~~~~~~~ip~~  116 (336)
T cd08252          81 FKVGDEVYYAGDI--------------------------TRP------------------GSNAEYQLVDERIVGHKPKS  116 (336)
T ss_pred             CCCCCEEEEcCCC--------------------------CCC------------------ccceEEEEEchHHeeeCCCC
Confidence            9999999843210                          011                  38999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCC-----CCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~VlI~Ga-g~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      ++.++++.+++.+.+||.++.+.+++++     |++|+|+|+ |++|++++++|+..| + +|+++++++++.++++++|
T Consensus       117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g  195 (336)
T cd08252         117 LSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELG  195 (336)
T ss_pred             CCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcC
Confidence            9999999999999999998877788887     999999986 999999999999999 7 9999999999999999999


Q ss_pred             CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceE
Q 017201          236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTL  315 (375)
Q Consensus       236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  315 (375)
                      ++.+++..+    ++.+.++.. .+.++|++||++++...+..++++++++ |+++.+|...   ..++...+..+++++
T Consensus       196 ~~~~~~~~~----~~~~~i~~~-~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~---~~~~~~~~~~~~~~~  266 (336)
T cd08252         196 ADHVINHHQ----DLAEQLEAL-GIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ---EPLDLGPLKSKSASF  266 (336)
T ss_pred             CcEEEeCCc----cHHHHHHhh-CCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC---CcccchhhhcccceE
Confidence            988887653    455566644 3348999999999766889999999997 9999998552   345555554578888


Q ss_pred             EEEeeccc-c-C-------CCCHHHHHHHHHcCCCCCCcc-eeeEeecccHHHHHHHHcCCCee-EEEEe
Q 017201          316 KGTTFGGI-K-T-------KSDLPTLLDKCKNKEFKLHQL-LTHHVKLEEIDKAIQLLKQPDCV-KVLIT  374 (375)
Q Consensus       316 ~~~~~~~~-~-~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~-kvvi~  374 (375)
                      .+...... . .       ...+.++++++.++.+++... ....++++++++|++.+.+++.. |++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         267 HWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             EEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            87554321 0 0       123667888999999885311 12357999999999999887764 88764

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2.9e-34  Score=267.50  Aligned_cols=310  Identities=25%  Similarity=0.333  Sum_probs=256.2

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++.+.+.+  +++++.+.|++.+++++||+.++++|++|++ ..+..+. ..+|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            789999875543  7777888888899999999999999999998 7765532 34678999999999999999998999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+....                             +                  |+|++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~-----------------------------~------------------g~~~~~~~~~~~~~~~~p~~~~  113 (323)
T cd05276          81 VGDRVCALLA-----------------------------G------------------GGYAEYVVVPAGQLLPVPEGLS  113 (323)
T ss_pred             CCCEEEEecC-----------------------------C------------------CceeEEEEcCHHHhccCCCCCC
Confidence            9999984321                             1                  3899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+++.++..+.++|.++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++..
T Consensus       114 ~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  192 (323)
T cd05276         114 LVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYR  192 (323)
T ss_pred             HHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC
Confidence            99999999999999998877788999999999997 9999999999999999 899999999999999889988888776


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      .   .++.+.+.+...+.++|++||+.|+. .+..+++++.++ |+++.+|..+.....++...++.+++++.++.....
T Consensus       193 ~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (323)
T cd05276         193 T---EDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSR  267 (323)
T ss_pred             c---hhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccch
Confidence            5   56777777777767899999999987 578899999997 999999876543345566666568999988765432


Q ss_pred             cCC-------CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          324 KTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       324 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      ...       ..+.++++++.++++++  ..++.|++++++++++.+.++.. .|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         268 SLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             hhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            111       12456778888888874  36778999999999999987665 47663

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=8.5e-34  Score=265.67  Aligned_cols=312  Identities=20%  Similarity=0.232  Sum_probs=245.4

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++++++.  .+++++.|.|+|+++||+|++.++++|++|+. +.|..+. +.+|.++|||++|+|++  ++++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            78999998775  48899999999999999999999999999998 7775432 34578899999999998  6777899


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+.....              +         +...                  .|+|++|++++.+.++++|++++
T Consensus        79 ~Gd~V~~~~~~--------------~---------~~~~------------------~g~~~~~~~v~~~~~~~lp~~~~  117 (324)
T cd08288          79 PGDRVVLTGWG--------------V---------GERH------------------WGGYAQRARVKADWLVPLPEGLS  117 (324)
T ss_pred             CCCEEEECCcc--------------C---------CCCC------------------CCcceeEEEEchHHeeeCCCCCC
Confidence            99999864210              0         1011                  24899999999999999999999


Q ss_pred             cccccccccchhhhhhhhh--hhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          165 PSDASFLSCGFTTGYGAAW--KEAKVE-KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~--~~~~~~-~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      .++++.+++.+.+|+.++.  +..+.. +|++|||+|+ |++|++++|+|+.+|+ +|++++.++++.++++++|++.++
T Consensus       118 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~  196 (324)
T cd08288         118 ARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEII  196 (324)
T ss_pred             HHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEE
Confidence            9999999999999887643  224455 6789999998 9999999999999999 899999999999999999999988


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      ++++     ....++.+..+ ++|.++|++++. .+..++..++.+ |+++.+|........+++..++.+++++.+...
T Consensus       197 ~~~~-----~~~~~~~~~~~-~~~~~~d~~~~~-~~~~~~~~~~~~-g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (324)
T cd08288         197 DRAE-----LSEPGRPLQKE-RWAGAVDTVGGH-TLANVLAQTRYG-GAVAACGLAGGADLPTTVMPFILRGVTLLGIDS  268 (324)
T ss_pred             Ecch-----hhHhhhhhccC-cccEEEECCcHH-HHHHHHHHhcCC-CEEEEEEecCCCCCCcchhhhhccccEEEEEEe
Confidence            8764     22245555555 589999999975 677888999987 999999875322333555556568999988753


Q ss_pred             ccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          321 GGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       321 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .....   ...+..+.+++..+.+++   +.+.++++++++|++.+++++. .|+|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         269 VMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             ecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            32211   123445666777887753   3679999999999999988877 4998864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=8.4e-34  Score=264.07  Aligned_cols=310  Identities=27%  Similarity=0.327  Sum_probs=253.8

Q ss_pred             eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201           10 KAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus        10 ~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      ||+....++.  .+.+++.+.+++.+++|+|+|.++++|++|++ ..+..+. .+|.++|||++|+|+.+|+++..+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            4566655554  36677777777889999999999999999998 7765542 457789999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|+...                             .                  .|+|++|+.++.+.++++|++++..
T Consensus        80 ~~V~~~~-----------------------------~------------------~g~~~~~~~~~~~~~~~~p~~~~~~  112 (320)
T cd05286          80 DRVAYAG-----------------------------P------------------PGAYAEYRVVPASRLVKLPDGISDE  112 (320)
T ss_pred             CEEEEec-----------------------------C------------------CCceeEEEEecHHHceeCCCCCCHH
Confidence            9998432                             0                  1389999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      +++.+++.+.+|++++.+..++++|++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++.+++..+ 
T Consensus       113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-  190 (320)
T cd05286         113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD-  190 (320)
T ss_pred             HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc-
Confidence            999999899999998877889999999999997 9999999999999999 8999999999999999999988887765 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                        .++.+.++.++.++++|++||++++. .+..++++++++ |+++.+|........+++..+..+++++.+.....+..
T Consensus       191 --~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (320)
T cd05286         191 --EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIA  266 (320)
T ss_pred             --hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcC
Confidence              67888888888777899999999986 888999999998 99999986543223445555546888887654332211


Q ss_pred             C-----CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          326 K-----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       326 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .     ..+..+++++.++.+++.  ..+.|++++++++++.+.+++. .|+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         267 TREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            1     224567888888888754  5678999999999999987766 4888763

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=8.2e-34  Score=264.88  Aligned_cols=316  Identities=25%  Similarity=0.351  Sum_probs=257.1

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      ||++++..++.+  +.++++|.|.+.+++++|++.++++|++|++ ..|..+ ....|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            578888776543  8888999999999999999999999999998 777553 245788999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+..                         +.                 ...|++++|+.++.+.++++|++++
T Consensus        81 ~Gd~v~~~~~~-------------------------~~-----------------~~~g~~~~~~~~~~~~~~~ip~~~~  118 (325)
T cd08253          81 VGDRVWLTNLG-------------------------WG-----------------RRQGTAAEYVVVPADQLVPLPDGVS  118 (325)
T ss_pred             CCCEEEEeccc-------------------------cC-----------------CCCcceeeEEEecHHHcEeCCCCCC
Confidence            99999865421                         00                 0014899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+++.+++++.+||+++....++.+|++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++..
T Consensus       119 ~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  197 (325)
T cd08253         119 FEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR  197 (325)
T ss_pred             HHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC
Confidence            99999999999999998877789999999999987 9999999999999998 899999999999999999998888776


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      .   .++...+.++..++++|+++|+++.. .....++++++. |+++.++... ....++...++.++.++.+......
T Consensus       198 ~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  271 (325)
T cd08253         198 A---EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTA  271 (325)
T ss_pred             C---cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhc
Confidence            5   56777788777767899999999987 678889999997 9999998654 3344555554557787776653211


Q ss_pred             c---CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 K---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .   ....+..+.+++.++.+++  .....+++++++++++.+.+++. .|+++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         272 TPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             CHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            0   0112445667777888764  35678999999999999987766 5988864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.3e-34  Score=258.68  Aligned_cols=268  Identities=33%  Similarity=0.501  Sum_probs=223.3

Q ss_pred             eEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccccc
Q 017201           35 EVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL  112 (375)
Q Consensus        35 ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~  112 (375)
                      ||+|++.++++|++|++ +.+..+ ...+|.++|||++|+|+++|++++.+++||+|+..+..+|+.|++|+.    .|+
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            68999999999999999 877664 345688999999999999999999999999999999999999999997    776


Q ss_pred             ccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCC
Q 017201          113 KYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGS  192 (375)
Q Consensus       113 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  192 (375)
                      .....  +...+                  |+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+++|+
T Consensus        77 ~~~~~--~~~~~------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~  136 (271)
T cd05188          77 GGGIL--GEGLD------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGD  136 (271)
T ss_pred             CCCEe--ccccC------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCC
Confidence            65442  33333                  49999999999999999999999999999999999999887777779999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+   .+..+.+. ...+.++|++||+++.
T Consensus       137 ~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~  211 (271)
T cd05188         137 TVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGG  211 (271)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCC
Confidence            99999996699999999999997 9999999999999999999988888766   56666665 5555689999999998


Q ss_pred             hhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHH
Q 017201          273 PSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDK  335 (375)
Q Consensus       273 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (375)
                      ...++.++++++++ |+++.++.............++.+++++.++....   ..++++++++
T Consensus       212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  270 (271)
T cd05188         212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL  270 (271)
T ss_pred             HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence            44788999999997 99999987754222222444566899999886442   3456666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-33  Score=264.49  Aligned_cols=310  Identities=28%  Similarity=0.340  Sum_probs=248.6

Q ss_pred             eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            9 CKAVVCWGLG--EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         9 ~~a~~~~~~~--~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      |||+++.+++  +.+++++.|.|++.+++|+||+.++++|++|+. ..+.......|.++|||++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            7999999988  469999999999999999999999999999998 7766543334778999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||+|+..+..                          ..+                  |+|++|+.++.+.++++|++++.
T Consensus        81 Gd~V~~~~~~--------------------------~~~------------------~~~~s~~~~~~~~~~~ip~~~~~  116 (325)
T cd08271          81 GDRVAYHASL--------------------------ARG------------------GSFAEYTVVDARAVLPLPDSLSF  116 (325)
T ss_pred             CCEEEeccCC--------------------------CCC------------------ccceeEEEeCHHHeEECCCCCCH
Confidence            9999865311                          111                  38999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      .+++.+++.+.+|++++.+.+++++|++|+|+|+ |++|++++++|+..|+ +|+.+. ++++.+.++++|++.+++...
T Consensus       117 ~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~  194 (325)
T cd08271         117 EEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND  194 (325)
T ss_pred             HHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC
Confidence            9999999999999998878889999999999998 8999999999999999 788776 678888888899988887766


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc-
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI-  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  323 (375)
                         .++.+.++++..++++|++++++++. ....+++++++. |+++.++......   +...+ .+++.+....+... 
T Consensus       195 ---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~  265 (325)
T cd08271         195 ---EDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDAS---PDPPF-TRALSVHEVALGAAH  265 (325)
T ss_pred             ---ccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCc---chhHH-hhcceEEEEEecccc
Confidence               56777888887777899999999987 557789999997 9999987543211   11112 13333333222111 


Q ss_pred             c---------CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 K---------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .         ..+.+..+++++.++.+++.  ..+.++++++.++++.+.++.. .|+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         266 DHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            0         11224568888888988743  5678999999999999987766 4988864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.1e-33  Score=266.22  Aligned_cols=315  Identities=22%  Similarity=0.214  Sum_probs=237.1

Q ss_pred             eEEEEecCCCCeEEEEeecCCC---CCCeEEEEEeeeecCCCccc-ccCCCCCCC-CCcccCcceeEEEEEeCCCCC-CC
Q 017201           10 KAVVCWGLGEPLKVEEIQVEPP---KSTEVRVKMLYASVCHTDIL-CSEGFPAPL-YPRVLGHEGVGVVESAGDEVK-EV   83 (375)
Q Consensus        10 ~a~~~~~~~~~l~~~~~~~p~~---~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~-~p~i~G~e~~G~Vv~vG~~v~-~~   83 (375)
                      ||+++.+.+.++++++++.|.|   ++++|+||+.++++|++|+. +.+...... .|.++|+|++|+|+++|++++ .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            6889999888888888887766   89999999999999999998 654322222 377899999999999999998 89


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc----cEEEc
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN----YVVKV  159 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~l  159 (375)
                      ++||+|+......|+                                          +.|+|++|++++.+    .++++
T Consensus        82 ~~Gd~V~~~~~~~~~------------------------------------------~~g~~~~~~~v~~~~~~~~~~~l  119 (352)
T cd08247          82 KVGDEVCGIYPHPYG------------------------------------------GQGTLSQYLLVDPKKDKKSITRK  119 (352)
T ss_pred             CCCCEEEEeecCCCC------------------------------------------CCceeeEEEEEccccccceeEEC
Confidence            999999865432210                                          12489999999987    79999


Q ss_pred             CCCCCcccccccccchhhhhhhhhhhc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhcCC
Q 017201          160 DPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGL-GTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       160 p~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lg~  236 (375)
                      |+++++.+++.+++++.|||+++.... ++++|++|||+|+ |.+|++++++|+..|.. +|+++. ++++.+.++++|+
T Consensus       120 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~  198 (352)
T cd08247         120 PENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGA  198 (352)
T ss_pred             CCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCC
Confidence            999999999999999999999886666 7999999999988 89999999999988543 566665 4555667888999


Q ss_pred             cEEeCCCCCCccc---HHHHHHhh-cCCCCccEEEEccCChhhHHHHHHhcc---cCCeEEEEEccCCCcccc-------
Q 017201          237 TDFINPDDEPNKS---ISELVKGI-THGMGVDYCFECTGVPSLLSEALETTK---VGKGKVIVIGVGVDAMVP-------  302 (375)
Q Consensus       237 ~~v~~~~~~~~~~---~~~~i~~~-~~~~g~d~vid~~g~~~~~~~~~~~l~---~~~G~iv~~g~~~~~~~~-------  302 (375)
                      +.+++..+   .+   +...+.+. ++++++|++||++|+......++++++   ++ |+++.++........       
T Consensus       199 ~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~  274 (352)
T cd08247         199 DHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSW  274 (352)
T ss_pred             CEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhc
Confidence            98888765   33   44444444 435689999999998557889999999   97 999987422111100       


Q ss_pred             ----chHHHhh----cCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          303 ----LNVIALA----CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       303 ----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                          +....+.    .+...+.......  ....+..+++++.++.+++  ...+.++++++++|++.+++++. .|+|+
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  350 (352)
T cd08247         275 DNPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVI  350 (352)
T ss_pred             cccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEE
Confidence                1111111    1222222211110  1134677888999998874  36788999999999999988776 59988


Q ss_pred             eC
Q 017201          374 TI  375 (375)
Q Consensus       374 ~~  375 (375)
                      ++
T Consensus       351 ~~  352 (352)
T cd08247         351 KV  352 (352)
T ss_pred             eC
Confidence            64

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-33  Score=263.62  Aligned_cols=311  Identities=25%  Similarity=0.303  Sum_probs=252.9

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++.+++.+  +++++.+.|++.+++|+|++.++++|++|++ ..+... ....|.++|||++|+|+.+|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            689999887765  8888888888899999999999999999998 766543 234578899999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+....                         |+.                 ...|+|++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~-------------------------~~~-----------------~~~g~~~~~~~v~~~~~~~~p~~~~  118 (326)
T cd08272          81 VGDEVYGCAG-------------------------GLG-----------------GLQGSLAEYAVVDARLLALKPANLS  118 (326)
T ss_pred             CCCEEEEccC-------------------------CcC-----------------CCCCceeEEEEecHHHcccCCCCCC
Confidence            9999985431                         111                 0124899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ..+++.+++.+.+||+++.+..++++|++++|+|+ |++|++++++|+..|+ +|++++++ ++.+.++++|++.+++..
T Consensus       119 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~  196 (326)
T cd08272         119 MREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYR  196 (326)
T ss_pred             HHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecc
Confidence            99999999999999998878889999999999986 9999999999999999 89999888 888999999998888776


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc-
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG-  322 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  322 (375)
                      .   . +...+.+++.+.++|+++|++++. .+..+++++++. |+++.++...  ...+.  ....+++++.+..... 
T Consensus       197 ~---~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~  266 (326)
T cd08272         197 E---T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY-GRVVSILGGA--THDLA--PLSFRNATYSGVFTLLP  266 (326)
T ss_pred             h---h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC-CEEEEEecCC--ccchh--hHhhhcceEEEEEcccc
Confidence            5   5 777888888877899999999986 688899999997 9999997553  22222  2234778777765321 


Q ss_pred             -cc------CCCCHHHHHHHHHcCCCCCCccee-eEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          323 -IK------TKSDLPTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       323 -~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                       ..      ....+..+++++.++.+++  .++ +.+++++++++++.+.+++. .|+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         267 LLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             cccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence             10      0124566888888888764  334 78999999999999987665 5998875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=3.9e-34  Score=270.88  Aligned_cols=308  Identities=23%  Similarity=0.237  Sum_probs=239.1

Q ss_pred             eeEEEEecCCCC---eEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCC---------------CCCCCcccCcc
Q 017201            9 CKAVVCWGLGEP---LKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFP---------------APLYPRVLGHE   68 (375)
Q Consensus         9 ~~a~~~~~~~~~---l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~---------------~~~~p~i~G~e   68 (375)
                      |||+++++++++   +++++.++|+| +++||+|++.++++|++|++ ..|...               ...+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            788998887765   89999999999 49999999999999999998 766421               23568899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeee
Q 017201           69 GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY  148 (375)
Q Consensus        69 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~  148 (375)
                      ++|+|+++|++++.+++||+|+..+..                          .                  +.|+|++|
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~--------------------------~------------------~~g~~~~~  116 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP--------------------------W------------------SQGTHAEY  116 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC--------------------------C------------------CCccceeE
Confidence            999999999999999999999854321                          0                  12499999


Q ss_pred             EEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCC----CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          149 MVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK----GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       149 ~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      +.++.+.++++|+++++++++.+++.+.|||+++.+.+.+.+    |++|+|+|+ |++|++++++|+.+|+ +|+++.+
T Consensus       117 ~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~  195 (350)
T cd08248         117 VVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCS  195 (350)
T ss_pred             EEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeC
Confidence            999999999999999999999999999999998777666654    999999997 9999999999999999 7888875


Q ss_pred             ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC---cc
Q 017201          224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD---AM  300 (375)
Q Consensus       224 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~---~~  300 (375)
                      + ++.+.++++|.+.+++..+   .++...+..   ..++|++||++|+. ....++++++++ |+++.+|....   ..
T Consensus       196 ~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~---~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  266 (350)
T cd08248         196 T-DAIPLVKSLGADDVIDYNN---EDFEEELTE---RGKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDK  266 (350)
T ss_pred             c-chHHHHHHhCCceEEECCC---hhHHHHHHh---cCCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCccccccc
Confidence            4 6778888999988887765   455555443   34799999999987 889999999998 99999985431   11


Q ss_pred             ccc---------hHHHhhc----CCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC
Q 017201          301 VPL---------NVIALAC----GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  367 (375)
Q Consensus       301 ~~~---------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  367 (375)
                      ..+         ....+..    +...+.....  ......+.++++++.++.+++  .+++.+++++++++++.+.+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~  342 (350)
T cd08248         267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFF--SPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGH  342 (350)
T ss_pred             ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEE--CCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCC
Confidence            011         1110000    1111111100  112345788999999998874  3678899999999999998776


Q ss_pred             e-eEEEEe
Q 017201          368 C-VKVLIT  374 (375)
Q Consensus       368 ~-~kvvi~  374 (375)
                      . .|++++
T Consensus       343 ~~~~vv~~  350 (350)
T cd08248         343 ARGKTVIK  350 (350)
T ss_pred             CceEEEeC
Confidence            5 488763

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=8.4e-33  Score=258.24  Aligned_cols=312  Identities=24%  Similarity=0.331  Sum_probs=255.8

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+.+...+.+  +++++.+.|++++++++|++.++++|++|+. ..+.++. ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            678888776654  6677777777899999999999999999998 7765532 34578999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+...                             .+                  |+|++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~-----------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~~  113 (325)
T TIGR02824        81 VGDRVCALV-----------------------------AG------------------GGYAEYVAVPAGQVLPVPEGLS  113 (325)
T ss_pred             CCCEEEEcc-----------------------------CC------------------CcceeEEEecHHHcEeCCCCCC
Confidence            999998431                             11                  3899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+++.++.++.+||.++.+..++++|++|+|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++..
T Consensus       114 ~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  192 (325)
T TIGR02824       114 LVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYR  192 (325)
T ss_pred             HHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecC
Confidence            99999999999999998778889999999999997 9999999999999999 899999999999988889988887766


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      .   .++...++....++++|++++++++. .+..++++++++ |+++.+|........+++..+..+++++.+......
T Consensus       193 ~---~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (325)
T TIGR02824       193 E---EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRAR  267 (325)
T ss_pred             c---hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhc
Confidence            5   56777788777766899999999976 778899999997 999999865432235666666569999998874431


Q ss_pred             cC-------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 KT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..       ...+.+++++++++.+++  ..++.+++++++++++.+.+++. .|+++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       268 PVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             chhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            11       012345677888888764  36778999999999999887766 4888764

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=5.8e-33  Score=260.57  Aligned_cols=304  Identities=24%  Similarity=0.254  Sum_probs=240.7

Q ss_pred             eeEEEEecCC------CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcceeEEEEEeCC
Q 017201            9 CKAVVCWGLG------EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         9 ~~a~~~~~~~------~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      ++|+++...+      +.+.+++++.|++.+++|+||+.++++|+.|.. ..+..   ++...+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            4566665433      238899999999999999999999999998765 43321   1112356789999999999996


Q ss_pred             CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeec-ccEE
Q 017201           79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVV  157 (375)
Q Consensus        79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~  157 (375)
                      +  .+++||+|+..                                                  ++|++|+.++. +.++
T Consensus        82 ~--~~~~Gd~V~~~--------------------------------------------------~~~~~~~~v~~~~~~~  109 (329)
T cd05288          82 P--DFKVGDLVSGF--------------------------------------------------LGWQEYAVVDGASGLR  109 (329)
T ss_pred             C--CCCCCCEEecc--------------------------------------------------cceEEEEEecchhhcE
Confidence            4  79999999732                                                  27999999999 9999


Q ss_pred             EcCCCCC--cccccc-cccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          158 KVDPSID--PSDASF-LSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       158 ~lp~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      ++|++++  +.++++ +++++.|||+++...+.+.+|++|||+|+ |++|++++++|+..|+ +|+++++++++.+.+++
T Consensus       110 ~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~  188 (329)
T cd05288         110 KLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVE  188 (329)
T ss_pred             ECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence            9999985  445555 88899999998877788999999999986 9999999999999999 89999999999999988


Q ss_pred             -cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccc-----cchHHH
Q 017201          234 -FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV-----PLNVIA  307 (375)
Q Consensus       234 -lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-----~~~~~~  307 (375)
                       +|++.+++.++   .++.+.+.++.+ .++|++||++|+. .+..++++++++ |+++.+|.......     .++...
T Consensus       189 ~~g~~~~~~~~~---~~~~~~v~~~~~-~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  262 (329)
T cd05288         189 ELGFDAAINYKT---PDLAEALKEAAP-DGIDVYFDNVGGE-ILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN  262 (329)
T ss_pred             hcCCceEEecCC---hhHHHHHHHhcc-CCceEEEEcchHH-HHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence             99998888876   567777877775 5899999999985 889999999997 99999986543211     123444


Q ss_pred             hhcCCceEEEEeeccccC--CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          308 LACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      ++.+++++.+........  ...+.++++++.++.+++.+  ...+++++++++++.+.+++. .|+|+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence            556888888876432211  13466788899999988653  446899999999999987765 47764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.5e-32  Score=254.33  Aligned_cols=316  Identities=26%  Similarity=0.373  Sum_probs=253.2

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++...+.  .+++++.+.|.+++++++|++.++++|+.|+. ..+.... ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            67888876554  37777888888899999999999999999998 7665432 34578899999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+...                        ...                  .|++++|+.++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~~~------------------------~~~------------------~g~~~~~~~~~~~~~~~~p~~~~  118 (328)
T cd08268          81 VGDRVSVIPAAD------------------------LGQ------------------YGTYAEYALVPAAAVVKLPDGLS  118 (328)
T ss_pred             CCCEEEeccccc------------------------cCC------------------CccceEEEEechHhcEeCCCCCC
Confidence            999998654211                        111                  14899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+++.+++.+.+||.++.....+.++++|+|+|+ |.+|++++++++..|+ +|+.+++++++.+.++++|.+.+++.+
T Consensus       119 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  197 (328)
T cd08268         119 FVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTD  197 (328)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC
Confidence            99999999999999998877888999999999998 9999999999999999 899999999999999889988888776


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      .   ..+.+.+.+...++++|+++++.++. ....++++++++ |+++.+|........++....+.+++++.+......
T Consensus       198 ~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (328)
T cd08268         198 E---EDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPG-GTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEI  272 (328)
T ss_pred             C---ccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccC-CEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccc
Confidence            5   56777787777777899999999985 788999999997 999999865432233444434558888888764422


Q ss_pred             c-CCCC----HHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          324 K-TKSD----LPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       324 ~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      . ....    +..+.+++.++.+.+  +....++++++.++++.+.+++. .|+|++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         273 TLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            1 1112    334455566777764  35678999999999999987766 488876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-32  Score=256.59  Aligned_cols=305  Identities=26%  Similarity=0.332  Sum_probs=238.0

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      .||+++...+.  .+++++.+.|.|.+++|+|++.++++|++|+. +.+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (331)
T cd08273           1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE   80 (331)
T ss_pred             CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence            37888887664  38888889999999999999999999999998 7766532 34688999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|+..+.                             +                  |+|++|++++.+.++++|++++
T Consensus        81 ~Gd~V~~~~~-----------------------------~------------------g~~~~~~~~~~~~~~~~p~~~~  113 (331)
T cd08273          81 VGDRVAALTR-----------------------------V------------------GGNAEYINLDAKYLVPVPEGVD  113 (331)
T ss_pred             CCCEEEEeCC-----------------------------C------------------cceeeEEEechHHeEECCCCCC
Confidence            9999985421                             1                  3899999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+++.+++++.+||+++.+..++.+|++|+|+|+ |++|++++++|+..|+ +|+++++ +++.+.++++|+.. ++..
T Consensus       114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~  190 (331)
T cd08273         114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR  190 (331)
T ss_pred             HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence            99999999999999998877788999999999997 9999999999999999 8999987 88888899999764 3443


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc--cchHH----------Hhhc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV--PLNVI----------ALAC  310 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~--~~~~~----------~~~~  310 (375)
                      .   .++...  .... .++|+++|++++. .+..++++++++ |+++.+|.... ...  .+++.          ....
T Consensus       191 ~---~~~~~~--~~~~-~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (331)
T cd08273         191 T---KDWLPA--MLTP-GGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLP  262 (331)
T ss_pred             C---cchhhh--hccC-CCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhccee
Confidence            3   334333  3333 3799999999987 588999999997 99999986643 111  11111          0111


Q ss_pred             CCceEEEEeecccc------CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          311 GGRTLKGTTFGGIK------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       311 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      ....+.+.......      ..+.+..+++++.++.+++  .+.+.+++++++++++.+.+++. .|+|+
T Consensus       263 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         263 TGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             ccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            22222222211110      1235677889999998874  36778999999999999987766 47765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=3.4e-32  Score=251.73  Aligned_cols=291  Identities=23%  Similarity=0.330  Sum_probs=236.6

Q ss_pred             cCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhc
Q 017201           28 VEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTS  105 (375)
Q Consensus        28 ~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~  105 (375)
                      .|++.+++++|++.++++|++|+. +.+.++. +.+|.++|+|++|+|+++|+++..+++||+|+......         
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~---------   72 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGES---------   72 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCC---------
Confidence            577889999999999999999998 7776542 45688999999999999999999999999998543110         


Q ss_pred             cCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhh
Q 017201          106 EMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE  185 (375)
Q Consensus       106 ~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~  185 (375)
                                                          .|+|++|+.++.+.++++|+++++.+++.++..+.+||+++ +.
T Consensus        73 ------------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~  115 (303)
T cd08251          73 ------------------------------------MGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-AR  115 (303)
T ss_pred             ------------------------------------CcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-Hh
Confidence                                                13899999999999999999999999999999999999986 57


Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      .++++|++|+|+|+ |++|++++|+|+++|+ +|+++++++++.+.++++|++.+++...   .++.+.+.+++++.++|
T Consensus       116 ~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d  191 (303)
T cd08251         116 AGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVD  191 (303)
T ss_pred             cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCce
Confidence            89999999999976 9999999999999999 8999999999999999999999988776   67888888888877899


Q ss_pred             EEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecccc------CCCCHHHHHHHHH
Q 017201          265 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK------TKSDLPTLLDKCK  337 (375)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  337 (375)
                      +++|++++. ....+++++++. |+++.+|.... ....++...+. +++.+....+....      ..+.+.++++++.
T Consensus       192 ~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (303)
T cd08251         192 VVINTLSGE-AIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE  268 (303)
T ss_pred             EEEECCcHH-HHHHHHHHhccC-cEEEEEeccCCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence            999999765 788999999997 99999986542 22334444443 44544443322110      0123566788888


Q ss_pred             cCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          338 NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      ++.+++.  ..+.+++++++++++.+.+++. .|+++
T Consensus       269 ~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         269 EGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             CCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            9988743  5678999999999999987766 47764

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.7e-31  Score=248.96  Aligned_cols=310  Identities=29%  Similarity=0.435  Sum_probs=251.2

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCC-CCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCC
Q 017201            9 CKAVVCWGLGE--PLKVEEIQVEPPK-STEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         9 ~~a~~~~~~~~--~l~~~~~~~p~~~-~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      |+|+++..++.  .+.+++.+ |.+. +++++|++.++++|++|+. +.+.... ...|.++|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            68899875443  36777777 6665 5999999999999999998 7765532 3346689999999999999999899


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      ++||+|+..+.                                               .|++++|+.++.+.++++|+++
T Consensus        80 ~~G~~V~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~ip~~~  112 (323)
T cd08241          80 KVGDRVVALTG-----------------------------------------------QGGFAEEVVVPAAAVFPLPDGL  112 (323)
T ss_pred             CCCCEEEEecC-----------------------------------------------CceeEEEEEcCHHHceeCCCCC
Confidence            99999985420                                               1389999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      ++.+++.+...+.+|+.++.+...+++|++|+|+|+ |++|++++++|+..|+ +|+.+++++++.+.++++|++.+++.
T Consensus       113 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (323)
T cd08241         113 SFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY  191 (323)
T ss_pred             CHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeec
Confidence            999998888899999998776788999999999998 9999999999999999 89999999999999999998888877


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      ..   .++.+.+...+++.++|.++|++|+. ....++++++++ |+++.+|........+++.....+++++.+.....
T Consensus       192 ~~---~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (323)
T cd08241         192 RD---PDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGA  266 (323)
T ss_pred             CC---ccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC-CEEEEEccCCCCcCcCCHHHHhhcCcEEEEEeccc
Confidence            65   67888888888777899999999985 788999999997 99999986543211233433445888888876543


Q ss_pred             ccC------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          323 IKT------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       323 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      +..      ...+..+++++.++.+++  ..+..|+++++.++++.+.+++. .|++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         267 YARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             ccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence            311      124567888898998864  36778999999999999887666 487763

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=6.2e-32  Score=250.55  Aligned_cols=301  Identities=23%  Similarity=0.268  Sum_probs=241.3

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      |+|+++..++..  +.+++.+.|+++++||+|++.++++|++|+. +.+...   ...+|.++|||++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            678898877643  5667778888899999999999999999998 776542   2345789999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||+|+..+..                          ..                  .|+|++|+.++.+.++++|++
T Consensus        81 ~~~G~~V~~~~~~--------------------------~~------------------~g~~~~~~~~~~~~~~~~p~~  116 (309)
T cd05289          81 FKVGDEVFGMTPF--------------------------TR------------------GGAYAEYVVVPADELALKPAN  116 (309)
T ss_pred             CCCCCEEEEccCC--------------------------CC------------------CCcceeEEEecHHHhccCCCC
Confidence            9999999855311                          00                  138999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +++.+++.+++.+.+|++++.+...+.+|++|||+|+ |.+|++++++++..|+ +|+++++++ +.+.++++|++.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~  194 (309)
T cd05289         117 LSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVID  194 (309)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEe
Confidence            9999999999999999998877677999999999997 9999999999999999 888888777 888888899888877


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      ...   .++.+    ...+.++|+++|++++. ....++++++++ |+++.+|.... ...    ....+++++....+.
T Consensus       195 ~~~---~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~----~~~~~~~~~~~~~~~  260 (309)
T cd05289         195 YTK---GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPP-AEQ----AAKRRGVRAGFVFVE  260 (309)
T ss_pred             CCC---Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCc-chh----hhhhccceEEEEEec
Confidence            655   34433    34455799999999987 789999999997 99999986542 111    223356666655432


Q ss_pred             cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      ..  ...+..++++++++.+++  +.++.|++++++++++.+.+++. .|+|+
T Consensus       261 ~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         261 PD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             cc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence            11  356788899999998763  46789999999999999987765 37663

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-30  Score=245.38  Aligned_cols=309  Identities=26%  Similarity=0.338  Sum_probs=244.4

Q ss_pred             eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC-CCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201           10 KAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP-APLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus        10 ~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~-~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      ||+++...+.  .+.+++.+.|++.+++|+|++.++++|++|+. +.+..+ .+..|.++|||++|+|+.+|+++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            4566655443  47777888888899999999999999999998 777553 2355778999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||+|+....                             +                  |+|++|+.++.+.++++|+++++
T Consensus        81 G~~V~~~~~-----------------------------~------------------~~~~~~~~~~~~~~~~ip~~~~~  113 (337)
T cd08275          81 GDRVMGLTR-----------------------------F------------------GGYAEVVNVPADQVFPLPDGMSF  113 (337)
T ss_pred             CCEEEEecC-----------------------------C------------------CeeeeEEEecHHHeEECCCCCCH
Confidence            999985421                             1                  38999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      .+++.+++.+.+||+++.+..++++|++|+|+|+ |++|++++++|+.. +. .++.. .++++.++++++|++.+++..
T Consensus       114 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~  191 (337)
T cd08275         114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYR  191 (337)
T ss_pred             HHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCC
Confidence            9999999999999999878889999999999998 99999999999998 43 33322 245577888889998888877


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc---------------cchHHH
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV---------------PLNVIA  307 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~---------------~~~~~~  307 (375)
                      .   .++...+++.++ .++|+++|++|+. ....++++++++ |+++.+|.... ...               .+++..
T Consensus       192 ~---~~~~~~~~~~~~-~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (337)
T cd08275         192 T---QDYVEEVKKISP-EGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK  265 (337)
T ss_pred             C---CcHHHHHHHHhC-CCceEEEECCcHH-HHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence            6   677778887775 4899999999986 778999999997 99999986542 111               122234


Q ss_pred             hhcCCceEEEEeeccccCC-----CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          308 LACGGRTLKGTTFGGIKTK-----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ++.+++++.++........     ..+.++++++.++.+++.  ....|++++++++++.+.+++. .|+++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            4558888888765422111     125668888888887743  5678999999999999987766 4998864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.98  E-value=1e-30  Score=239.93  Aligned_cols=281  Identities=23%  Similarity=0.280  Sum_probs=231.1

Q ss_pred             CeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccccc
Q 017201           34 TEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL  112 (375)
Q Consensus        34 ~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~  112 (375)
                      +||+||+.++++|++|++ ..+..  +.+|.++|||++|+|+++|+++..+++||+|+...                   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence            589999999999999999 77654  34578999999999999999999999999998432                   


Q ss_pred             ccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCC
Q 017201          113 KYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGS  192 (375)
Q Consensus       113 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  192 (375)
                                                   .|+|++|+.++.+.++++|+++++.+++.+++++.+||.++.+...+++|+
T Consensus        60 -----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~  110 (293)
T cd05195          60 -----------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGE  110 (293)
T ss_pred             -----------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCC
Confidence                                         138999999999999999999999999999899999999887778999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC--CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG--MTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|+|+|+ |++|++++++|+..|+ +|+++++++++.+.+++++  ++.+++..+   .++.+.+++.+.++++|+++|+
T Consensus       111 ~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~  186 (293)
T cd05195         111 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNS  186 (293)
T ss_pred             EEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeC
Confidence            9999976 9999999999999999 8999999999999998888  677887765   5788888888877789999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecccc--C----CCCHHHHHHHHHcCCCC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK--T----KSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~  342 (375)
                      +++. .++.++++++++ |+++.+|.... ....++...+. +++.+....+....  .    ...+..+++++.+++++
T Consensus       187 ~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (293)
T cd05195         187 LSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFL-RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK  263 (293)
T ss_pred             CCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhc-cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence            9987 889999999997 99999986543 11233333333 56666665443221  0    12356788888899877


Q ss_pred             CCcceeeEeecccHHHHHHHHcCCCee-EEEE
Q 017201          343 LHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLI  373 (375)
Q Consensus       343 ~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi  373 (375)
                        +..+..+++++++++++.+.+++.. |+|+
T Consensus       264 --~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         264 --PLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             --cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence              4467789999999999999877664 7663

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=1.3e-30  Score=243.08  Aligned_cols=294  Identities=26%  Similarity=0.274  Sum_probs=226.8

Q ss_pred             EEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCC
Q 017201           22 KVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGEC   97 (375)
Q Consensus        22 ~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   97 (375)
                      ++++.+.|+++++||+|++.++++|++|++ +.|..+   ....|.++|||++|+|+++|+++.++++||+|+..+... 
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~-   93 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK-   93 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence            778889999999999999999999999999 776552   123467899999999999999999999999998543210 


Q ss_pred             CCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhh
Q 017201           98 KECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT  177 (375)
Q Consensus        98 ~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t  177 (375)
                                               .                  .|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus        94 -------------------------~------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~  130 (319)
T cd08267          94 -------------------------G------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLT  130 (319)
T ss_pred             -------------------------C------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHHHH
Confidence                                     0                  138999999999999999999999999999999999


Q ss_pred             hhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHh
Q 017201          178 GYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKG  256 (375)
Q Consensus       178 a~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~  256 (375)
                      ||+++.....+++|++|+|+|+ |++|++++++|+..|+ +|++++++ ++.+.++++|++.+++...   .++.   +.
T Consensus       131 a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~  202 (319)
T cd08267         131 ALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---AL  202 (319)
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hh
Confidence            9998877777999999999998 9999999999999999 89988865 8888889999988887665   3333   34


Q ss_pred             hcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEccCCC-ccccc---hHHHhhcCCceEEEEeeccccCCCCHHH
Q 017201          257 ITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVD-AMVPL---NVIALACGGRTLKGTTFGGIKTKSDLPT  331 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (375)
                      .+.+.++|++++++++. ......+..++++ |+++.+|.... .....   ...... ....+......  .....+.+
T Consensus       203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~  278 (319)
T cd08267         203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGG-GGRRLKFFLAK--PNAEDLEQ  278 (319)
T ss_pred             ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhcc-ccceEEEEEec--CCHHHHHH
Confidence            45556899999999853 2334444458997 99999986643 11111   111111 12222222111  11456788


Q ss_pred             HHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEE
Q 017201          332 LLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLI  373 (375)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi  373 (375)
                      +++++.++++++  ..++.|++++++++++.+.+++.. |+++
T Consensus       279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence            899999998874  467899999999999999876653 7663

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=4.1e-30  Score=235.66  Aligned_cols=276  Identities=22%  Similarity=0.310  Sum_probs=226.2

Q ss_pred             EEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccccccccc
Q 017201           38 VKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI  116 (375)
Q Consensus        38 V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~  116 (375)
                      ||+.++++|++|++ ..+.++   .|.++|||++|+|+++|++++.+++||+|+...                       
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            78999999999999 777543   357899999999999999999999999998432                       


Q ss_pred             ccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEE
Q 017201          117 ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV  196 (375)
Q Consensus       117 ~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI  196 (375)
                                               .|+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+.+|++|+|
T Consensus        56 -------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv  110 (288)
T smart00829       56 -------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLI  110 (288)
T ss_pred             -------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEE
Confidence                                     1389999999999999999999999999999999999998777788999999999


Q ss_pred             ECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh
Q 017201          197 LGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP  273 (375)
Q Consensus       197 ~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~  273 (375)
                      +|+ |++|++++++|+..|+ +|+++++++++.+.++++|+  +.+++..+   .++.+.+.+...++++|+++|++++.
T Consensus       111 ~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~  186 (288)
T smart00829      111 HAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGE  186 (288)
T ss_pred             ecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHH
Confidence            986 9999999999999999 89999999999999999998  67777765   56778888887777899999999864


Q ss_pred             hhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecccc-----CCCCHHHHHHHHHcCCCCCCcce
Q 017201          274 SLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK-----TKSDLPTLLDKCKNKEFKLHQLL  347 (375)
Q Consensus       274 ~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  347 (375)
                       .+..++++++++ |+++.+|.... ....++...+ .+++++.+..+....     ....+..+++++.++++++.  .
T Consensus       187 -~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  261 (288)
T smart00829      187 -FLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPF-RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P  261 (288)
T ss_pred             -HHHHHHHhccCC-cEEEEEcCcCCccccccchhhh-cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence             788999999997 99999986542 2233444443 367777665533211     11235667888888888753  4


Q ss_pred             eeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          348 THHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       348 ~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      .+.|++++++++++.+..++. .|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      262 VTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             ceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            578999999999999988765 47663

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=2.9e-28  Score=223.26  Aligned_cols=252  Identities=27%  Similarity=0.374  Sum_probs=200.8

Q ss_pred             CCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccC
Q 017201           54 EGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRG  133 (375)
Q Consensus        54 g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~  133 (375)
                      |.++. ++|.++|||++|+|+++|++++.+++||+|+..                                         
T Consensus        14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------   51 (277)
T cd08255          14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------   51 (277)
T ss_pred             cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence            33444 488999999999999999999999999999743                                         


Q ss_pred             cceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc
Q 017201          134 QKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH  213 (375)
Q Consensus       134 ~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~  213 (375)
                               +.|++|++++.+.++++|+++++.+++.+ +++.+||+++ ..+++++|++|||+|+|++|++++++|+++
T Consensus        52 ---------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~  120 (277)
T cd08255          52 ---------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAA  120 (277)
T ss_pred             ---------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence                     16899999999999999999999999888 7899999986 478999999999998899999999999999


Q ss_pred             CCCeEEEEcCChhhHHHhhhcC-CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEE
Q 017201          214 GAAKIIGIDKNPWKKEKGKAFG-MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       214 G~~~V~~~~~~~~~~~~~~~lg-~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~  292 (375)
                      |+++|+++++++++.++++++| ++.+++..+           ....+.++|++||+++....+..++++++++ |+++.
T Consensus       121 g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~  188 (277)
T cd08255         121 GAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVL  188 (277)
T ss_pred             CCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEE
Confidence            9944999999999999999999 454443321           1124458999999998766889999999998 99999


Q ss_pred             EccCCCccccchHHHhhcCCceEEEEeeccc---------cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHH
Q 017201          293 IGVGVDAMVPLNVIALACGGRTLKGTTFGGI---------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  363 (375)
Q Consensus       293 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  363 (375)
                      +|..... .......+..+.+++.+......         ...+.+.++++++.++.+++  .+.+.+++++++++++.+
T Consensus       189 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~  265 (277)
T cd08255         189 VGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLL  265 (277)
T ss_pred             EeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHH
Confidence            9876533 22222334446667776654321         11256788999999999774  367789999999999999


Q ss_pred             cCC--CeeEEEE
Q 017201          364 KQP--DCVKVLI  373 (375)
Q Consensus       364 ~~~--~~~kvvi  373 (375)
                      +++  ...|+++
T Consensus       266 ~~~~~~~~k~~~  277 (277)
T cd08255         266 FEDPPECLKVVL  277 (277)
T ss_pred             HcCCccceeeeC
Confidence            877  3458864

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.96  E-value=5.5e-29  Score=246.60  Aligned_cols=289  Identities=20%  Similarity=0.257  Sum_probs=239.1

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCC-------cccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201           21 LKVEEIQVE---PPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYP-------RVLGHEGVGVVESAGDEVKEVKEGDIV   89 (375)
Q Consensus        21 l~~~~~~~p---~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p-------~i~G~e~~G~Vv~vG~~v~~~~~Gd~V   89 (375)
                      +++.+.|..   +..++.=+.-|-|+.||..|+. ..|..++...|       .++|-||+|+          .+-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence            566666544   2356777899999999999999 88887654333       4789999987          4559999


Q ss_pred             EeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccc
Q 017201           90 IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS  169 (375)
Q Consensus        90 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa  169 (375)
                      +                             |+....                  ++++.+.++.++++.+|.+.++++|+
T Consensus      1499 M-----------------------------~mvpAk------------------sLATt~l~~rd~lWevP~~WTleeAs 1531 (2376)
T KOG1202|consen 1499 M-----------------------------GMVPAK------------------SLATTVLASRDFLWEVPSKWTLEEAS 1531 (2376)
T ss_pred             E-----------------------------Eeeehh------------------hhhhhhhcchhhhhhCCcccchhhcc
Confidence            8                             333222                  78999999999999999999999999


Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCC
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDD  244 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~  244 (375)
                      .+|+.|+|||++|+.++..++|+++||++ +|++|++||.+|.++|+ +|+.++.++||++++++    +....+-|+++
T Consensus      1532 tVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd 1610 (2376)
T KOG1202|consen 1532 TVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD 1610 (2376)
T ss_pred             cCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc
Confidence            99999999999999999999999999994 59999999999999999 99999999999999875    44566778887


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                         .+|...+...+.|+|+|+|+++...+ .++.+++||+-. |+|..+|...- ...++.+..|+ |+++++|....++
T Consensus      1611 ---tsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfL-kNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1611 ---TSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFL-KNVSFHGILLDSV 1684 (2376)
T ss_pred             ---ccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhc-CeeeeecceecccCCcchhhhhh-cccceeeeehhhh
Confidence               89999999999999999999999876 889999999997 99999997754 55566666666 9999999887655


Q ss_pred             cCC--CCHHHHHHHHH----cCCCCCCcceeeEeecccHHHHHHHHcCCCee-EEEEeC
Q 017201          324 KTK--SDLPTLLDKCK----NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI  375 (375)
Q Consensus       324 ~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvi~~  375 (375)
                      ...  +.+.++..+++    +|..+  |+.+++|+-.++++||+.|.+++++ ||||++
T Consensus      1685 mege~e~~~ev~~Lv~eGIksGvV~--PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVR--PLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             hcCcHHHHHHHHHHHHhhhccCcee--ccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence            322  23444555544    45555  6678899999999999999999995 999863

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.96  E-value=6.5e-27  Score=204.10  Aligned_cols=291  Identities=24%  Similarity=0.244  Sum_probs=219.4

Q ss_pred             EEeecC-CCCCCeEEEEEeeeecCCCcccccCCCCCC--CCCc-----ccCcceeEEEEEeCCCCCCCCCCCEEEeeccC
Q 017201           24 EEIQVE-PPKSTEVRVKMLYASVCHTDILCSEGFPAP--LYPR-----VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIG   95 (375)
Q Consensus        24 ~~~~~p-~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~--~~p~-----i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   95 (375)
                      ++++++ ++++++|+||.+|.+..|.---+.+.....  -.|.     |.| ..+|+|++.  +..++++||.|....  
T Consensus        27 ~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~S--~~~~~~~GD~v~g~~--  101 (343)
T KOG1196|consen   27 TTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVIDS--GHPNYKKGDLVWGIV--  101 (343)
T ss_pred             eeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEec--CCCCCCcCceEEEec--
Confidence            344444 458999999999999876433221111110  0122     334 678999995  556899999997432  


Q ss_pred             CCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCC--CCCccccc-c
Q 017201           96 ECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDP--SIDPSDAS-F  170 (375)
Q Consensus        96 ~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~--~~~~~~aa-~  170 (375)
                                                                      +|.||.++++.  ..+++|.  +.++.... +
T Consensus       102 ------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~  133 (343)
T KOG1196|consen  102 ------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGL  133 (343)
T ss_pred             ------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhhc
Confidence                                                            89999999774  4455543  34444433 3


Q ss_pred             cccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcc
Q 017201          171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNK  248 (375)
Q Consensus       171 l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~  248 (375)
                      +.++..|||..+.+...+++|++|+|-|| |++|+++.|+|+.+|+ +|++.+.++||.++++ ++|.+.++|+.+  +.
T Consensus       134 lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e~  210 (343)
T KOG1196|consen  134 LGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ES  210 (343)
T ss_pred             cCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--cc
Confidence            56789999999999999999999999988 9999999999999999 9999999999999987 579999999998  35


Q ss_pred             cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccc-----hHHHhhcCCceEEEEeeccc
Q 017201          249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL-----NVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       249 ~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  323 (375)
                      ++.+++++..+. |+|+.||++|+. .+...+..++.. |+++.||+-+.+....     ++..++.|++++.+.....+
T Consensus       211 ~~~~aL~r~~P~-GIDiYfeNVGG~-~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~  287 (343)
T KOG1196|consen  211 DLSAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY  287 (343)
T ss_pred             CHHHHHHHhCCC-cceEEEeccCcH-HHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence            889999887766 999999999998 889999999997 9999999776321111     12335668999988654433


Q ss_pred             --cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 --KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                        ...+.+..+..++++|+|+.-.-+  .-.|++.+.||.-|.+++. +|.++.+
T Consensus       288 ~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  288 LDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             hhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEe
Confidence              123345678888999999865333  3369999999999999988 4877753

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.90  E-value=8.5e-24  Score=165.68  Aligned_cols=107  Identities=42%  Similarity=0.683  Sum_probs=94.8

Q ss_pred             CCeEEEEEeeeecCCCccc-ccCC-CCCCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccc
Q 017201           33 STEVRVKMLYASVCHTDIL-CSEG-FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNL  110 (375)
Q Consensus        33 ~~ev~V~v~~~~i~~~D~~-~~g~-~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~  110 (375)
                      |+||+|||.++|||++|++ +.+. .....+|.++|||++|+|+++|++++.|++||+|++.+...|+.|++|+.+.+++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            6899999999999999999 8883 4557889999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc
Q 017201          111 CLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV  159 (375)
Q Consensus       111 c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  159 (375)
                      |++....  |+..+|                  +|+||+.+++++++|+
T Consensus        81 c~~~~~~--g~~~~G------------------~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVL--GLGLDG------------------GFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEET--TTSSTC------------------SSBSEEEEEGGGEEEE
T ss_pred             CCCCCEe--EcCCCC------------------cccCeEEEehHHEEEC
Confidence            9887764  666666                  9999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.78  E-value=2.5e-18  Score=139.13  Aligned_cols=129  Identities=30%  Similarity=0.471  Sum_probs=118.2

Q ss_pred             HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHH
Q 017201          201 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  280 (375)
Q Consensus       201 ~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~  280 (375)
                      ++|++++|+||+.|+ +|++++++++|+++++++|++.++++++   .++.+.+++++++.++|+||||+|+++.++.++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~   76 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI   76 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence            689999999999996 9999999999999999999999999988   779999999999889999999999888999999


Q ss_pred             HhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHH
Q 017201          281 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCK  337 (375)
Q Consensus       281 ~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (375)
                      ++++++ |+++.+|.......+++...++.+++++.+++..+   .++++++++++.
T Consensus        77 ~~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la  129 (130)
T PF00107_consen   77 KLLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA  129 (130)
T ss_dssp             HHEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred             HHhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence            999998 99999999876788999999999999999998653   467888888775

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.53  E-value=3.7e-13  Score=127.63  Aligned_cols=165  Identities=22%  Similarity=0.238  Sum_probs=133.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      ..+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+ +        ..+.+      .+.|+||
T Consensus       199 ~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v------~~aDVVI  262 (413)
T cd00401         199 MIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV------KEGDIFV  262 (413)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH------cCCCEEE
Confidence            4789999999999999999999999999 89999999999999999998533 1        11222      2589999


Q ss_pred             EccCChhhHHHH-HHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHH--HHHHHHHcCCC-CC
Q 017201          268 ECTGVPSLLSEA-LETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLP--TLLDKCKNKEF-KL  343 (375)
Q Consensus       268 d~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~  343 (375)
                      +++|+...+... +.+++++ |+++.+|..   ...++...+..+++++.++....  ....++  ..++++.+|++ ++
T Consensus       263 ~atG~~~~i~~~~l~~mk~G-gilvnvG~~---~~eId~~~L~~~el~i~g~~~~~--~~~~~~~g~aI~LLa~Grlvnl  336 (413)
T cd00401         263 TTTGNKDIITGEHFEQMKDG-AIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQV--DRYELPDGRRIILLAEGRLVNL  336 (413)
T ss_pred             ECCCCHHHHHHHHHhcCCCC-cEEEEeCCC---CCccCHHHHHhhccEEEEccCCc--ceEEcCCcchhhhhhCcCCCCC
Confidence            999998778876 9999997 999999854   44678888888899998876321  122455  68999999999 88


Q ss_pred             CcceeeE-----eecc-cHHHHHHHHcCCCe--eEEEEe
Q 017201          344 HQLLTHH-----VKLE-EIDKAIQLLKQPDC--VKVLIT  374 (375)
Q Consensus       344 ~~~~~~~-----~~~~-~~~~a~~~~~~~~~--~kvvi~  374 (375)
                      ...+++.     ++|+ ++.++++.+.+++.  .|+++.
T Consensus       337 ~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~  375 (413)
T cd00401         337 GCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL  375 (413)
T ss_pred             cccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence            8888888     8999 99999999987654  377654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.44  E-value=1.8e-12  Score=126.07  Aligned_cols=156  Identities=21%  Similarity=0.275  Sum_probs=116.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCC----------cccHHHHHH
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEP----------NKSISELVK  255 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~----------~~~~~~~i~  255 (375)
                      +..++++|+|+|+|++|++|++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+          ..++.+...
T Consensus       161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            35689999999999999999999999999 89999999999999999999854 5543310          012333333


Q ss_pred             hh-cCC-CCccEEEEccCChh-----h-HHHHHHhcccCCeEEEEEccCCCc--cccchHHHhhc-CCceEEEEeecccc
Q 017201          256 GI-THG-MGVDYCFECTGVPS-----L-LSEALETTKVGKGKVIVIGVGVDA--MVPLNVIALAC-GGRTLKGTTFGGIK  324 (375)
Q Consensus       256 ~~-~~~-~g~d~vid~~g~~~-----~-~~~~~~~l~~~~G~iv~~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~  324 (375)
                      +. .+. +++|+||+|++.+.     . .+++++.++++ |+++.+|...+.  ..+++...++. +++++.|.+  ++ 
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~--n~-  315 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT--DL-  315 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeC--CC-
Confidence            32 221 47999999998642     4 48999999998 999999985332  34555555665 899999875  22 


Q ss_pred             CCCCHH-HHHHHHHcCCCCCCccee
Q 017201          325 TKSDLP-TLLDKCKNKEFKLHQLLT  348 (375)
Q Consensus       325 ~~~~~~-~~~~~~~~~~~~~~~~~~  348 (375)
                       ...++ ...+++.++.+++.++++
T Consensus       316 -P~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        316 -PSRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             -chhHHHHHHHHHHhCCccHHHHhc
Confidence             23555 589999998888766655

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.29  E-value=1.8e-12  Score=104.17  Aligned_cols=120  Identities=24%  Similarity=0.318  Sum_probs=78.0

Q ss_pred             cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC--ChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC
Q 017201          234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG--VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG  311 (375)
Q Consensus       234 lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~  311 (375)
                      ||+++++|+++   .++       ....++|+|||++|  +...+..++++| ++ |+++.++.      .+.......+
T Consensus         1 LGAd~vidy~~---~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~------~~~~~~~~~~   62 (127)
T PF13602_consen    1 LGADEVIDYRD---TDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG------DLPSFARRLK   62 (127)
T ss_dssp             CT-SEEEETTC---SHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S------HHHHHHHHHH
T ss_pred             CCcCEEecCCC---ccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC------cccchhhhhc
Confidence            68999999987   555       33448999999999  654456777888 97 99999973      1111111112


Q ss_pred             CceEEEEeecccc----CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEE
Q 017201          312 GRTLKGTTFGGIK----TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI  373 (375)
Q Consensus       312 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi  373 (375)
                      ...+....+.+..    ..+.++.+.+++.+|++++  .+.++|||+++.+|++.+++++. +|+||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKP--PIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEE--eeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            2333333322110    2345889999999999995  48889999999999999999888 69986

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.60  E-value=4.9e-07  Score=88.14  Aligned_cols=109  Identities=21%  Similarity=0.277  Sum_probs=82.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC-----------CcccHHHHHHh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE-----------PNKSISELVKG  256 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~-----------~~~~~~~~i~~  256 (375)
                      ..++++|+|+|+|.+|++++++++.+|+ +|++++.++++++.++++|++.+......           ..+++.+...+
T Consensus       161 ~vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       161 KVPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence            3578999999999999999999999999 79999999999999999999764322110           01233333333


Q ss_pred             hcC--CCCccEEEEcc---CChh---hHHHHHHhcccCCeEEEEEccCCC
Q 017201          257 ITH--GMGVDYCFECT---GVPS---LLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       257 ~~~--~~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      +..  .+++|+||+|+   |.+.   ..++.++.++++ +.++.++...+
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G  288 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG  288 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence            332  24799999999   6543   467889999998 99999986654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.56  E-value=4.2e-07  Score=83.02  Aligned_cols=163  Identities=20%  Similarity=0.218  Sum_probs=101.4

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhc----CCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .+.+++|++||.+|+|+ |..+.++++..|.. +|++++.+++..+.+++.    +...+-...    .++. .+ .+.+
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~----~d~~-~l-~~~~  144 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL----GEIE-AL-PVAD  144 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE----cchh-hC-CCCC
Confidence            46788999999999987 98888888887753 799999999998888753    332211000    1221 11 1222


Q ss_pred             CCCccEEEEcc------CChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHH
Q 017201          260 GMGVDYCFECT------GVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLL  333 (375)
Q Consensus       260 ~~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (375)
                       ..||+|+...      .....+..+.++|+++ |+++..+......  ++ ..+. +...+.+....   ......++.
T Consensus       145 -~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~--~~-~~~~-~~~~~~~~~~~---~~~~~~e~~  215 (272)
T PRK11873        145 -NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE--LP-EEIR-NDAELYAGCVA---GALQEEEYL  215 (272)
T ss_pred             -CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC--CC-HHHH-HhHHHHhcccc---CCCCHHHHH
Confidence             3799998553      2235789999999998 9999887554221  11 1111 22222222111   123456677


Q ss_pred             HHHHcCCCCC-CcceeeEeecccHHHHHHHH
Q 017201          334 DKCKNKEFKL-HQLLTHHVKLEEIDKAIQLL  363 (375)
Q Consensus       334 ~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~  363 (375)
                      +++++..+.. .......++++++.++++.+
T Consensus       216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~  246 (272)
T PRK11873        216 AMLAEAGFVDITIQPKREYRIPDAREFLEDW  246 (272)
T ss_pred             HHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence            7777644432 22234568899999999988

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.41  E-value=1.8e-08  Score=97.33  Aligned_cols=160  Identities=16%  Similarity=0.210  Sum_probs=106.3

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccC
Q 017201           64 VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCS  143 (375)
Q Consensus        64 i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g  143 (375)
                      .-|.|+++.+.+|++++++     .|++.+.+ |+.|..|    +..|.+...  .|...++                  
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~--~g~~l~~------------------  138 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT--VGKVLER------------------  138 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC--chHHHHH------------------
Confidence            4589999999999999876     67777777 8888888    666655443  2444444                  


Q ss_pred             ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhh---hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Q 017201          144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA---AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG  220 (375)
Q Consensus       144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~---l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~  220 (375)
                      .|++++.++. .+.. ...++       ..+.+.++.+   ..+..+..++++|+|+|+|.+|.++++.++..|+.+|++
T Consensus       139 lf~~a~~~~k-~vr~-~t~i~-------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v  209 (417)
T TIGR01035       139 LFQKAFSVGK-RVRT-ETDIS-------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILI  209 (417)
T ss_pred             HHHHHHHHhh-hhhh-hcCCC-------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEE
Confidence            7888887765 2222 00110       0011222222   123344578899999999999999999999999669999


Q ss_pred             EcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChh
Q 017201          221 IDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS  274 (375)
Q Consensus       221 ~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~  274 (375)
                      ++++.++.. +++.++... +..     .+..+.+.      ++|+||+|++++.
T Consensus       210 ~~rs~~ra~~la~~~g~~~-i~~-----~~l~~~l~------~aDvVi~aT~s~~  252 (417)
T TIGR01035       210 ANRTYERAEDLAKELGGEA-VKF-----EDLEEYLA------EADIVISSTGAPH  252 (417)
T ss_pred             EeCCHHHHHHHHHHcCCeE-eeH-----HHHHHHHh------hCCEEEECCCCCC
Confidence            999988754 666777642 221     12222221      6999999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.33  E-value=8.3e-06  Score=78.13  Aligned_cols=102  Identities=25%  Similarity=0.298  Sum_probs=77.6

Q ss_pred             hhhhhhhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhh
Q 017201          179 YGAAWKEAKVE-KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       179 ~~~l~~~~~~~-~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      |.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+. +.        ++.+.+   
T Consensus       199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal---  265 (425)
T PRK05476        199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA---  265 (425)
T ss_pred             HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH---
Confidence            33333332444 89999999999999999999999999 899999999887666666754 22        122222   


Q ss_pred             cCCCCccEEEEccCChhhHH-HHHHhcccCCeEEEEEccCC
Q 017201          258 THGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~  297 (375)
                         .++|+||+++|+...+. ..+..++++ +.++..|...
T Consensus       266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence               16899999999886676 678888987 8888888665

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.22  E-value=2.1e-05  Score=75.00  Aligned_cols=93  Identities=26%  Similarity=0.301  Sum_probs=74.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      ..+|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+. +.+        ..+.+      .+.|++|
T Consensus       192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal------~~aDVVI  255 (406)
T TIGR00936       192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA------KIGDIFI  255 (406)
T ss_pred             CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH------hcCCEEE
Confidence            4789999999999999999999999999 899999998887777767763 221        22222      1579999


Q ss_pred             EccCChhhHHH-HHHhcccCCeEEEEEccCC
Q 017201          268 ECTGVPSLLSE-ALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       268 d~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~  297 (375)
                      +++|+...+.. .+..++++ +.++.+|...
T Consensus       256 taTG~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       256 TATGNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             ECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence            99998877764 88888887 8999888664

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.20  E-value=2.5e-05  Score=72.04  Aligned_cols=111  Identities=19%  Similarity=0.200  Sum_probs=80.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .+++|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++++|+..+ ..     .++.+.+    .  ++|+||++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l----~--~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV----G--KIDIIFNT  217 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh----C--CCCEEEEC
Confidence            68999999999999999999999999 99999999998888888887532 11     1222222    2  59999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEE
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKG  317 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~  317 (375)
                      ++..-.....+..++++ +.++.++...+ ...+  .....++++..+
T Consensus       218 ~p~~~i~~~~l~~~~~g-~vIIDla~~pg-gtd~--~~a~~~Gv~~~~  261 (296)
T PRK08306        218 IPALVLTKEVLSKMPPE-ALIIDLASKPG-GTDF--EYAEKRGIKALL  261 (296)
T ss_pred             CChhhhhHHHHHcCCCC-cEEEEEccCCC-CcCe--eehhhCCeEEEE
Confidence            87553345677888997 99999986654 2222  233335566553

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.14  E-value=1.3e-05  Score=72.07  Aligned_cols=136  Identities=18%  Similarity=0.240  Sum_probs=83.1

Q ss_pred             ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      +|.+|.. +...++++++++++..+.--. +.. .+..+.  ....++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4555533 667788898888776554211 111 111111  1257899999999987 888876655 57657999999


Q ss_pred             ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccCC
Q 017201          224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       224 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++...+.+++.-...-+. ..   ..+      ..+...||+|+.+....   ..++.+.+.|+++ |.++..|...
T Consensus       151 s~~~l~~A~~n~~~~~~~-~~---~~~------~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~  216 (250)
T PRK00517        151 DPQAVEAARENAELNGVE-LN---VYL------PQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE  216 (250)
T ss_pred             CHHHHHHHHHHHHHcCCC-ce---EEE------ccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence            998887765421100000 00   000      00111599998766543   3467888999998 9999876543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.13  E-value=1.7e-07  Score=90.84  Aligned_cols=160  Identities=16%  Similarity=0.161  Sum_probs=96.1

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccC
Q 017201           64 VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCS  143 (375)
Q Consensus        64 i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g  143 (375)
                      .-|||+++.+.+|++++++.     |++.+.+    |.+|+ +-+..|.....  .|...++                  
T Consensus        91 ~~g~ea~~hl~~V~~GldS~-----V~GE~qI----lgQvk-~a~~~a~~~g~--~g~~l~~------------------  140 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSM-----VLGEPQI----LGQVK-DAYALAQEAGT--VGTILNR------------------  140 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhh-----hcCChHH----HHHHH-HHHHHHHHcCC--chHHHHH------------------
Confidence            35999999999999998774     4433333    34444 33333433221  1222222                  


Q ss_pred             ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhh---cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Q 017201          144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE---AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG  220 (375)
Q Consensus       144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~---~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~  220 (375)
                      .|++.+.++        +.+..+.+. ...+.+.++.++...   .+..++++|+|+|+|.+|.++++.++..|+.+|++
T Consensus       141 lf~~a~~~~--------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v  211 (423)
T PRK00045        141 LFQKAFSVA--------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITV  211 (423)
T ss_pred             HHHHHHHHH--------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEE
Confidence            455444333        332222221 122344555544211   12367899999999999999999999999878999


Q ss_pred             EcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChh
Q 017201          221 IDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS  274 (375)
Q Consensus       221 ~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~  274 (375)
                      +++++++.+ +++.+|.+ +++.     .+..+.+      .++|+||+|++++.
T Consensus       212 ~~r~~~ra~~la~~~g~~-~~~~-----~~~~~~l------~~aDvVI~aT~s~~  254 (423)
T PRK00045        212 ANRTLERAEELAEEFGGE-AIPL-----DELPEAL------AEADIVISSTGAPH  254 (423)
T ss_pred             EeCCHHHHHHHHHHcCCc-EeeH-----HHHHHHh------ccCCEEEECCCCCC
Confidence            999988865 66677753 3221     1222222      16899999998764

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.07  E-value=1e-05  Score=75.20  Aligned_cols=130  Identities=20%  Similarity=0.241  Sum_probs=86.5

Q ss_pred             ccEEEcCCCCCcccccccccchhhhhhhhhhhcCC----CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH-
Q 017201          154 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV----EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK-  228 (375)
Q Consensus       154 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~----~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~-  228 (375)
                      ...+++|+.+..+.++... +.+.++.++ +.+..    .++.+|+|+|+|.+|..+++.++..|+.+|+++++++++. 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            4567778888888887765 556666654 23332    4799999999999999999999988877899999998875 


Q ss_pred             HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhh---HHHHHHhcccCCeEEEEEccCC
Q 017201          229 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL---LSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       229 ~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~---~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++++++|.. +++.     +++.+.+.      ..|+||.+++.+..   +..++......+-.++.++.+.
T Consensus       217 ~la~~~g~~-~~~~-----~~~~~~l~------~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPr  276 (311)
T cd05213         217 ELAKELGGN-AVPL-----DELLELLN------EADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPR  276 (311)
T ss_pred             HHHHHcCCe-EEeH-----HHHHHHHh------cCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence            567778873 3322     12322221      48999999998744   2333333321113455565443

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02494 adenosylhomocysteinase

Probab=98.06  E-value=5e-05  Score=73.13  Aligned_cols=92  Identities=21%  Similarity=0.301  Sum_probs=74.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+         ...+.+.      ..|++|+
T Consensus       252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv---------~leEal~------~ADVVI~  315 (477)
T PLN02494        252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL---------TLEDVVS------EADIFVT  315 (477)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec---------cHHHHHh------hCCEEEE
Confidence            679999999999999999999999999 89999999888767777776521         1222221      5799999


Q ss_pred             ccCChhhH-HHHHHhcccCCeEEEEEccCC
Q 017201          269 CTGVPSLL-SEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       269 ~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +.|+...+ ...+..++++ +.++.+|...
T Consensus       316 tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~  344 (477)
T PLN02494        316 TTGNKDIIMVDHMRKMKNN-AIVCNIGHFD  344 (477)
T ss_pred             CCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence            99987554 7899999997 9999998754

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.87  E-value=1.6e-05  Score=80.22  Aligned_cols=80  Identities=21%  Similarity=0.236  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHhhhcCCcEEeCCCCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---------------------PWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~---------------------~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ..++|++|+|+|+|++|+++++.++..|+ +|++++..                     +.+++.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~-  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV-  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence            46789999999999999999999999999 89988842                     34566778899887765432 


Q ss_pred             CcccH-HHHHHhhcCCCCccEEEEccCChh
Q 017201          246 PNKSI-SELVKGITHGMGVDYCFECTGVPS  274 (375)
Q Consensus       246 ~~~~~-~~~i~~~~~~~g~d~vid~~g~~~  274 (375)
                       ..+. .+.+.     .++|+||+++|...
T Consensus       211 -~~~~~~~~~~-----~~~D~Vi~AtG~~~  234 (564)
T PRK12771        211 -GEDITLEQLE-----GEFDAVFVAIGAQL  234 (564)
T ss_pred             -CCcCCHHHHH-----hhCCEEEEeeCCCC
Confidence             0111 11111     26999999999763

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.84  E-value=0.00018  Score=68.40  Aligned_cols=99  Identities=19%  Similarity=0.230  Sum_probs=70.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++........+  .+++.+.+    .  ++|+||+
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l----~--~aDvVI~  236 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV----K--RADLLIG  236 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH----c--cCCEEEE
Confidence            34569999999999999999999999 8999999988877664 455432222222  12232222    2  5899999


Q ss_pred             ccC---C--hh-hHHHHHHhcccCCeEEEEEccCCC
Q 017201          269 CTG---V--PS-LLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       269 ~~g---~--~~-~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      +++   .  +. .....++.++++ +.++.++...+
T Consensus       237 a~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G  271 (370)
T TIGR00518       237 AVLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG  271 (370)
T ss_pred             ccccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence            973   2  21 136788889997 99999986644

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.77  E-value=0.00014  Score=66.80  Aligned_cols=97  Identities=23%  Similarity=0.263  Sum_probs=64.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcE-EeCCCCCCcccHHHHHHhhcCCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTD-FINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      ..++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++.    +... +....    .+    ...... .+
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~----~~----~~~~~~-~~  225 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL----IY----LEQPIE-GK  225 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cc----cccccC-CC
Confidence            56889999999987 888877776 5666999999998887776542    2211 11010    01    111122 37


Q ss_pred             ccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccC
Q 017201          263 VDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       263 ~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ||+|+......   ..+..+.++|+++ |.++..|..
T Consensus       226 fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       226 ADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             ceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            99998766433   3566788999998 999887654

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.68  E-value=0.00034  Score=60.06  Aligned_cols=110  Identities=19%  Similarity=0.279  Sum_probs=77.0

Q ss_pred             cccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----hhhcCCcEEeCCCCCC
Q 017201          171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDFINPDDEP  246 (375)
Q Consensus       171 l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lg~~~v~~~~~~~  246 (375)
                      +.-+...|.  +.+...+++|++||-+|+| +|..++-+|+..|  +|+.+++.++=.+.    ++.+|...|.....  
T Consensus        55 is~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g--  127 (209)
T COG2518          55 ISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHG--  127 (209)
T ss_pred             ecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC--
Confidence            333444443  4578899999999999997 4999999999988  89999988764443    45688754322211  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                        |-   .+-+.....||.|+-+.+-+..-+..++.|+++ |+++..
T Consensus       128 --DG---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P  168 (209)
T COG2518         128 --DG---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP  168 (209)
T ss_pred             --Cc---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence              00   112233347999988887765557889999998 887765

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.66  E-value=0.00033  Score=67.76  Aligned_cols=93  Identities=24%  Similarity=0.329  Sum_probs=73.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+         ++.+.++      ..|+|+
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell~------~ADIVI  314 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVVE------TADIFV  314 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHHh------cCCEEE
Confidence            4689999999999999999999999999 89999888877655555565421         1222221      589999


Q ss_pred             EccCChhhHH-HHHHhcccCCeEEEEEccCC
Q 017201          268 ECTGVPSLLS-EALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       268 d~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .+.|....+. ..+..++++ +.++.+|...
T Consensus       315 ~atGt~~iI~~e~~~~MKpG-AiLINvGr~d  344 (476)
T PTZ00075        315 TATGNKDIITLEHMRRMKNN-AIVGNIGHFD  344 (476)
T ss_pred             ECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence            9999876665 899999997 9999998664

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.65  E-value=0.00077  Score=61.72  Aligned_cols=139  Identities=12%  Similarity=0.134  Sum_probs=83.8

Q ss_pred             ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhc---CCCCCCEEEEECC-CHHHHHHHHHHH-HcCCCeE
Q 017201          144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA---KVEKGSSVAVLGL-GTVGLGAVDGAR-MHGAAKI  218 (375)
Q Consensus       144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~VlI~Ga-g~~G~~ai~la~-~~G~~~V  218 (375)
                      .|-+|.++..+..+.-  .....++..-| -+.|.|. |.+..   ..-..+.|+|..| +-.++..+..++ ..+..++
T Consensus        90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            4566666665543311  11111122223 4566664 22221   2334467777777 777776666666 4555599


Q ss_pred             EEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          219 IGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       219 ~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +.+.+ +...++.+.+|. +.|+.+++         |..+... ..-+++|..|+.+.+....+.+...--..+.+|...
T Consensus       166 vglTS-~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~-~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  166 VGLTS-ARNVAFVESLGCYDEVLTYDD---------IDSLDAP-QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             EEEec-CcchhhhhccCCceEEeehhh---------hhhccCC-CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            99985 445568899997 66887765         2333222 567899999999888888888877523456666554

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.58  E-value=0.0013  Score=60.29  Aligned_cols=94  Identities=18%  Similarity=0.250  Sum_probs=69.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|++|+|+|.|.+|.+.++.++.+|+ +|++.++++++.+.+.++|...+ ..     .++.+    ...  +.|+||++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~l~~----~l~--~aDiVint  216 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NKLEE----KVA--EIDIVINT  216 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HHHHH----Hhc--cCCEEEEC
Confidence            57899999999999999999999998 99999999888777766665422 11     12222    222  68999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +...-.-...+..++++ ..++.++...
T Consensus       217 ~P~~ii~~~~l~~~k~~-aliIDlas~P  243 (287)
T TIGR02853       217 IPALVLTADVLSKLPKH-AVIIDLASKP  243 (287)
T ss_pred             CChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence            86542224567778886 8888887654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.51  E-value=0.00042  Score=56.06  Aligned_cols=100  Identities=23%  Similarity=0.246  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCc--EEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT--DFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      +--.+.++||+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++..  .++...+     +.+.+.      .+
T Consensus         8 ~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~------~~   76 (135)
T PF01488_consen    8 GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ------EA   76 (135)
T ss_dssp             STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH------TE
T ss_pred             CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh------hC
Confidence            3446899999999999999999999999988999999999876654 45322  2333322     222221      59


Q ss_pred             cEEEEccCChhh--HHHHHHhcccCCeEEEEEccCC
Q 017201          264 DYCFECTGVPSL--LSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       264 d~vid~~g~~~~--~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      |+||++++.+..  .+..+....+..+.++.++.+.
T Consensus        77 DivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr  112 (135)
T PF01488_consen   77 DIVINATPSGMPIITEEMLKKASKKLRLVIDLAVPR  112 (135)
T ss_dssp             SEEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred             CeEEEecCCCCcccCHHHHHHHHhhhhceeccccCC
Confidence            999999976522  2233333332103677776554

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08324 short chain dehydrogenase; Validated

Probab=97.51  E-value=0.00082  Score=69.45  Aligned_cols=114  Identities=16%  Similarity=0.166  Sum_probs=71.0

Q ss_pred             ceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Q 017201          144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID  222 (375)
Q Consensus       144 ~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~  222 (375)
                      ++++|..+++..++++ +.++.+++.....          ......+|+++||+|+ |++|...++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            4667777777666666 4555555542110          0123347899999997 9999999998888999 899999


Q ss_pred             CChhhHHHhh-hcCC----cE-EeCCCCCCcccHHHHHHhhcC-CCCccEEEEccC
Q 017201          223 KNPWKKEKGK-AFGM----TD-FINPDDEPNKSISELVKGITH-GMGVDYCFECTG  271 (375)
Q Consensus       223 ~~~~~~~~~~-~lg~----~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~vid~~g  271 (375)
                      +++++.+.+. .++.    .. ..|-.+  .+.+.+.+.+... ..++|++|++.|
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            9988765543 2332    11 223333  1223232332211 126999999998

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.44  E-value=0.0019  Score=55.88  Aligned_cols=102  Identities=23%  Similarity=0.405  Sum_probs=70.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcC-CcEEeCCCCCCcccHHHHHHhh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFG-MTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg-~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ...++.++++||.+|+|. |.+++.+|+..+. .+|++++.+++..+.++    .++ .+.+....    .+..+.+...
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence            466889999999999987 9999999987642 38999999998887654    355 22221111    1222222222


Q ss_pred             cCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEE
Q 017201          258 THGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       258 ~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~  293 (375)
                       .+ .+|.||...+.   ...+..+.+.|+++ |+++..
T Consensus       109 -~~-~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 -NE-KFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             -CC-CCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence             22 69999986543   34678889999997 998753

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.35  E-value=0.0012  Score=55.95  Aligned_cols=79  Identities=18%  Similarity=0.235  Sum_probs=57.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC---cEEeCCCCC-CcccHHHHHHhhcCCCCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM---TDFINPDDE-PNKSISELVKGITHGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~---~~v~~~~~~-~~~~~~~~i~~~~~~~g~d  264 (375)
                      -|.+|||.|+ +++|+..++-...+|- +|+++.+++++++.+++.-.   ..+.|-.+. .-..+.+++++..+  ..+
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P--~lN   80 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP--NLN   80 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC--chh
Confidence            4789999976 8999988888888897 99999999999998876543   234444430 01225555555444  488


Q ss_pred             EEEEccC
Q 017201          265 YCFECTG  271 (375)
Q Consensus       265 ~vid~~g  271 (375)
                      +++++.|
T Consensus        81 vliNNAG   87 (245)
T COG3967          81 VLINNAG   87 (245)
T ss_pred             eeeeccc
Confidence            9998887

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.32  E-value=0.0024  Score=53.76  Aligned_cols=103  Identities=21%  Similarity=0.294  Sum_probs=73.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE--EeCCCCCCcccHHHHHHhh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD--FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~--v~~~~~~~~~~~~~~i~~~  257 (375)
                      ..++++||+.++=+|+|. |..++++|+..-..+|++++++++..+..    ++||.+.  ++....   +   +.+.. 
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p---~~L~~-   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---P---EALPD-   99 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---h---HhhcC-
Confidence            567899999888889863 77888999655455999999999988765    4688764  333322   2   22222 


Q ss_pred             cCCCCccEEEEccCCh--hhHHHHHHhcccCCeEEEEEccCC
Q 017201          258 THGMGVDYCFECTGVP--SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~--~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                        -..+|.+|-.-|..  ..++.++..|+++ |+++.-...-
T Consensus       100 --~~~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~naitl  138 (187)
T COG2242         100 --LPSPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAITL  138 (187)
T ss_pred             --CCCCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeecH
Confidence              12589998665532  4688999999998 9998775443

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.29  E-value=0.0014  Score=62.63  Aligned_cols=112  Identities=13%  Similarity=0.130  Sum_probs=75.6

Q ss_pred             cccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccH
Q 017201          171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI  250 (375)
Q Consensus       171 l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~  250 (375)
                      +..+-...+..+.+..++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+....   .++
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~  222 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY  222 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch
Confidence            333444445555677889999999999996 57788899998898 9999999999998887643211011000   122


Q ss_pred             HHHHHhhcCCCCccEEEEc-----cCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          251 SELVKGITHGMGVDYCFEC-----TGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       251 ~~~i~~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                          ..+ .+ .||.|+..     ++.   ...++.+.+.|+|+ |.++...
T Consensus       223 ----~~l-~~-~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~  267 (383)
T PRK11705        223 ----RDL-NG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT  267 (383)
T ss_pred             ----hhc-CC-CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence                112 23 69998643     333   24678889999998 9988754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.28  E-value=0.0015  Score=57.14  Aligned_cols=80  Identities=15%  Similarity=0.260  Sum_probs=59.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCC----cEEeCCCCCCcccHHHHHHhhcCCC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGM----TDFINPDDEPNKSISELVKGITHGM-G  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~----~~v~~~~~~~~~~~~~~i~~~~~~~-g  262 (375)
                      .++.++|+|| +++|.+.++.....|+ +|+.+.++.++++.+. +++.    ...+|-.+  .+...+.+..+.... .
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence            4578899999 9999999999999999 9999999999997764 5672    22344443  234445555554433 4


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+.+++.|.
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999999984

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.28  E-value=0.0041  Score=53.33  Aligned_cols=101  Identities=20%  Similarity=0.190  Sum_probs=64.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCC
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      ...+++|++||.+|+|+-++ +..+++.. +..+|++++.++.+    ...+...+ .+..+   ....+.+.+..+..+
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~   98 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDK   98 (188)
T ss_pred             hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCC
Confidence            45679999999999986554 44444443 44489999998864    11233322 13222   334445555555557


Q ss_pred             ccEEEEcc-----CC------------hhhHHHHHHhcccCCeEEEEEc
Q 017201          263 VDYCFECT-----GV------------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       263 ~d~vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +|+|+...     |.            ...+..+.++|+++ |+++...
T Consensus        99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438        99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            99999531     21            24677889999997 9988754

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.23  E-value=0.0035  Score=58.34  Aligned_cols=102  Identities=24%  Similarity=0.223  Sum_probs=71.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      .+...++++++||.+|+| .|..++.+++..+. .+|++++.+++..+.++    +.|.+.+....    .+..+.+.  
T Consensus        73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~--  145 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVP--  145 (322)
T ss_pred             HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccc--
Confidence            456678999999999998 49999999998863 26999999988766554    35654332111    12222111  


Q ss_pred             cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                       ....+|+|+.+.+.+......++.|+++ |+++..
T Consensus       146 -~~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        146 -EFAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             -ccCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence             1236999999888665566788999997 987763

>PRK14967 putative methyltransferase; Provisional

Probab=97.17  E-value=0.018  Score=50.75  Aligned_cols=99  Identities=18%  Similarity=0.179  Sum_probs=64.8

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++    .+....+...     ++.+.+    .
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~-----d~~~~~----~   98 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG-----DWARAV----E   98 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC-----chhhhc----c
Confidence            345678899999999986 8888888875 55599999999988776543    3432222111     222211    2


Q ss_pred             CCCccEEEEccCC---------------------------hhhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFECTGV---------------------------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...||+|+....-                           ...+..+.+.|+++ |+++.+-
T Consensus        99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967         99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            2379999875310                           11345678899997 9888653

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.06  E-value=0.006  Score=51.82  Aligned_cols=92  Identities=24%  Similarity=0.422  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .--.|.+|.|+|.|.+|...+++++.+|+ +|++.+++..........+...         .++.+.+.      ..|+|
T Consensus        32 ~~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~------~aDiv   95 (178)
T PF02826_consen   32 RELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLA------QADIV   95 (178)
T ss_dssp             S-STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHH------H-SEE
T ss_pred             cccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcc------hhhhh
Confidence            34578999999999999999999999999 9999999887766445555422         22333332      47999


Q ss_pred             EEccCChh----h-HHHHHHhcccCCeEEEEEcc
Q 017201          267 FECTGVPS----L-LSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       267 id~~g~~~----~-~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +.+....+    . -...+..++++ ..++.++.
T Consensus        96 ~~~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen   96 SLHLPLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             EE-SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             hhhhccccccceeeeeeeeeccccc-eEEEeccc
Confidence            88775321    1 23677888886 88887763

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.03  E-value=0.0007  Score=61.56  Aligned_cols=99  Identities=20%  Similarity=0.310  Sum_probs=62.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i  254 (375)
                      +.+.++++||++||-+|+| -|-.+..+|+..|+ +|++++.++++.++++    +.|...   +.. .+     +    
T Consensus        54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~-~D-----~----  121 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL-QD-----Y----  121 (273)
T ss_dssp             HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE-S------G----
T ss_pred             HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-ee-----c----
Confidence            5678899999999999997 57778889999999 9999999999988775    455321   211 11     1    


Q ss_pred             HhhcCCCCccEEEE-----ccCC---hhhHHHHHHhcccCCeEEEEEcc
Q 017201          255 KGITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       255 ~~~~~~~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +++..  .||.|+.     .+|.   +..+....+.|+|+ |++++-..
T Consensus       122 ~~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i  167 (273)
T PF02353_consen  122 RDLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI  167 (273)
T ss_dssp             GG-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred             cccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            12222  7998754     3342   23588899999998 99876543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.03  E-value=0.0099  Score=52.67  Aligned_cols=104  Identities=18%  Similarity=0.251  Sum_probs=65.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhc---CCcEEe--CCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTDFI--NPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---g~~~v~--~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      ++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.+   +....+  |-.+  .+...+.+.+... -.
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN   80 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            4689999998 9999999999999999 999999988877555 222   222222  2222  1223222222211 12


Q ss_pred             CccEEEEccCChh-----------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          262 GVDYCFECTGVPS-----------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       262 g~d~vid~~g~~~-----------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++|.++.+.+...                       .++..+.+++++ |+++.++...
T Consensus        81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  138 (238)
T PRK05786         81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS  138 (238)
T ss_pred             CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            5899998886420                       134455566666 8888887553

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.01  E-value=0.002  Score=58.16  Aligned_cols=103  Identities=16%  Similarity=0.227  Sum_probs=75.1

Q ss_pred             hhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc-E--Ee--CCCCCCccc
Q 017201          179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-D--FI--NPDDEPNKS  249 (375)
Q Consensus       179 ~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~-~--v~--~~~~~~~~~  249 (375)
                      +..+.+.++++||++||=+|+|- |.+++.+|+..|+ +|++++-|+++.+.+++    .|.. .  +.  |+++     
T Consensus        61 ~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd-----  133 (283)
T COG2230          61 LDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD-----  133 (283)
T ss_pred             HHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc-----
Confidence            44456889999999999999975 7788899999999 99999999999887654    4543 1  11  2222     


Q ss_pred             HHHHHHhhcCCCCccEEE-----EccCC---hhhHHHHHHhcccCCeEEEEEccCCC
Q 017201          250 ISELVKGITHGMGVDYCF-----ECTGV---PSLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~vi-----d~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      +       . + .||-|+     +.+|.   +..+..+.++|+++ |++.+......
T Consensus       134 ~-------~-e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~  180 (283)
T COG2230         134 F-------E-E-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP  180 (283)
T ss_pred             c-------c-c-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence            1       1 1 378774     34454   34688899999998 99988776653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.95  E-value=0.0061  Score=54.71  Aligned_cols=81  Identities=17%  Similarity=0.201  Sum_probs=56.2

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-----cCCcE-E--eCCCCCCcccHHHHHHh-h
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----FGMTD-F--INPDDEPNKSISELVKG-I  257 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----lg~~~-v--~~~~~~~~~~~~~~i~~-~  257 (375)
                      ...+.++||+|| +++|...+......|+ +++.+.|+++|++.+.+     .+... +  +|-.+   .+-.+.+.. +
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l   78 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDEL   78 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHH
Confidence            356789999999 9999987777778898 99999999999876642     33322 2  24333   333334433 2


Q ss_pred             c-CCCCccEEEEccCC
Q 017201          258 T-HGMGVDYCFECTGV  272 (375)
Q Consensus       258 ~-~~~g~d~vid~~g~  272 (375)
                      . .+..+|+.|+++|.
T Consensus        79 ~~~~~~IdvLVNNAG~   94 (265)
T COG0300          79 KERGGPIDVLVNNAGF   94 (265)
T ss_pred             HhcCCcccEEEECCCc
Confidence            2 22479999999984

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.91  E-value=0.016  Score=45.46  Aligned_cols=102  Identities=17%  Similarity=0.324  Sum_probs=68.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG  256 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~  256 (375)
                      .....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++    .++...  ++..+-   ...   ...
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~   84 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LED   84 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chh
Confidence            3455677889999999976 888999999875459999999988877764    234322  222211   110   111


Q ss_pred             hcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          257 ITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       .. ..+|+|+-..+..   +.++.+.+.|+++ |.++...
T Consensus        85 -~~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        85 -SL-PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             -hc-CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence             11 2799998765332   3688899999998 9887653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.91  E-value=0.0043  Score=52.18  Aligned_cols=104  Identities=21%  Similarity=0.234  Sum_probs=66.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC-CCCC-------------cccHHHHHH
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-DDEP-------------NKSISELVK  255 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~-~~~~-------------~~~~~~~i~  255 (375)
                      +..+|+|+|+|.+|+.|+++++.+|+ +|++.+..+++.+..+..+...+... .+..             .......+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            34889999999999999999999999 99999999998888887777554321 1100             012222233


Q ss_pred             hhcCCCCccEEEEccC--C---hh-hHHHHHHhcccCCeEEEEEccCC
Q 017201          256 GITHGMGVDYCFECTG--V---PS-LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g--~---~~-~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +...  .+|++|-+.-  +   +. .-+..++.++++ ..++.++.-.
T Consensus        98 ~~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~  142 (168)
T PF01262_consen   98 EFIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ  142 (168)
T ss_dssp             HHHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred             HHHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence            3222  4799886441  1   11 234678888887 8888886443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.90  E-value=0.0066  Score=46.95  Aligned_cols=93  Identities=24%  Similarity=0.315  Sum_probs=62.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHhhhc----CC-cEE-eCCCCCCcccHHHHHHhhcCCCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAF----GM-TDF-INPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~l----g~-~~v-~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      ||++||-+|+|. |..++.+++. .++ +|++++.+++-.+.+++.    +. +.+ +...     ++ .  ........
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~--~~~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E--FDPDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H--GGTTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c--cCcccCCC
Confidence            689999999974 8888888884 566 999999999888877642    21 111 1111     22 1  11222336


Q ss_pred             ccEEEEcc-CCh---------hhHHHHHHhcccCCeEEEEE
Q 017201          263 VDYCFECT-GVP---------SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       263 ~d~vid~~-g~~---------~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ||+|+... ...         ..++...+.|+|+ |+++.-
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            99999877 221         1378899999997 988753

...

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.86  E-value=0.013  Score=49.58  Aligned_cols=93  Identities=22%  Similarity=0.307  Sum_probs=61.6

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          194 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       194 VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      |+|+|+ |.+|...++.+...|. +|+++++++++.+.  ..+.+.+. |..+     . +.+.+...  ++|.||.+.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d-----~-~~~~~al~--~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD-----P-DSVKAALK--GADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC-----H-HHHHHHHT--TSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh-----h-hhhhhhhh--hcchhhhhhh
Confidence            789998 9999999999999998 99999999998776  34444432 3322     2 22333222  6999999998


Q ss_pred             Ch----hhHHHHHHhcccC-CeEEEEEccCC
Q 017201          272 VP----SLLSEALETTKVG-KGKVIVIGVGV  297 (375)
Q Consensus       272 ~~----~~~~~~~~~l~~~-~G~iv~~g~~~  297 (375)
                      ..    ......++.++.. -.+++.++..+
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             hhcccccccccccccccccccccceeeeccc
Confidence            42    2344444444332 13777766443

...

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0076  Score=54.98  Aligned_cols=78  Identities=18%  Similarity=0.267  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhh---cCCCCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGI---THGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~---~~~~g~d  264 (375)
                      .+.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|-.+  .+++...+.+.   ..+ .+|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g-~id   78 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGG-RLD   78 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCC-Ccc
Confidence            4678999998 9999998888888899 99999999988877766665443 24333  12333333322   223 699


Q ss_pred             EEEEccC
Q 017201          265 YCFECTG  271 (375)
Q Consensus       265 ~vid~~g  271 (375)
                      ++|++.|
T Consensus        79 ~li~~Ag   85 (277)
T PRK05993         79 ALFNNGA   85 (277)
T ss_pred             EEEECCC
Confidence            9999876

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.85  E-value=0.015  Score=48.00  Aligned_cols=103  Identities=24%  Similarity=0.334  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      -.-.|++++|.|=|.+|...++.++.+|+ +|++++.+|-+.-.+..-|....         .+.+.+    .  ..|++
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~---------~~~~a~----~--~adi~   82 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM---------TLEEAL----R--DADIF   82 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE----------HHHHT----T--T-SEE
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec---------CHHHHH----h--hCCEE
Confidence            35689999999999999999999999999 99999999988776666666421         122222    1  57999


Q ss_pred             EEccCChhhH-HHHHHhcccCCeEEEEEccCCCccccchHHHhh
Q 017201          267 FECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPLNVIALA  309 (375)
Q Consensus       267 id~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~  309 (375)
                      |.++|..+.+ .+-++.++++ ..+..+|...   ..++...+.
T Consensus        83 vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~d---~Eid~~~L~  122 (162)
T PF00670_consen   83 VTATGNKDVITGEHFRQMKDG-AILANAGHFD---VEIDVDALE  122 (162)
T ss_dssp             EE-SSSSSSB-HHHHHHS-TT-EEEEESSSST---TSBTHHHHH
T ss_pred             EECCCCccccCHHHHHHhcCC-eEEeccCcCc---eeEeecccc
Confidence            9999987543 4678888886 6666666443   344444443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.84  E-value=0.016  Score=50.77  Aligned_cols=101  Identities=24%  Similarity=0.357  Sum_probs=68.7

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i  254 (375)
                      +.....+++|++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++    .|...  ++..+.      ..  
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~~--  138 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------TL--  138 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------cc--
Confidence            44667889999999999874 7788888887753 389999999888776653    34322  222211      00  


Q ss_pred             HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                       .......||.|+-........+...+.|+++ |+++..
T Consensus       139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence             0112236999876655554667888999998 998765

>PRK04148 hypothetical protein; Provisional

Probab=96.84  E-value=0.0077  Score=48.16  Aligned_cols=96  Identities=21%  Similarity=0.234  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ...++.+++++|.| .|...+..+...|. .|++++.+++..+.+++.+...+.+.--  +.++  .+.     +++|+|
T Consensus        13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y-----~~a~li   81 (134)
T PRK04148         13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY-----KNAKLI   81 (134)
T ss_pred             ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH-----hcCCEE
Confidence            34466889999999 78744445557798 9999999999999898888765543221  1222  111     268999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ...-..++.....+++.+.-+.-++..
T Consensus        82 ysirpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         82 YSIRPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             EEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence            888877765556666655543344443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.82  E-value=0.012  Score=55.81  Aligned_cols=96  Identities=15%  Similarity=0.118  Sum_probs=64.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC---Cc-EEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---MT-DFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .+|||+|+|.+|+.+++.+.+.|-.+|++++++.++.+.+....   .+ ..+|..+  .+.+.+.|    .  ++|+||
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li----~--~~d~VI   73 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALI----K--DFDLVI   73 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHH----h--cCCEEE
Confidence            57999999999999999988777349999999999998886653   22 2345444  12232333    2  469999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++....-....+-.|+..+ -.++.+...
T Consensus        74 n~~p~~~~~~i~ka~i~~g-v~yvDts~~  101 (389)
T COG1748          74 NAAPPFVDLTILKACIKTG-VDYVDTSYY  101 (389)
T ss_pred             EeCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence            9998764444444555554 455555433

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.82  E-value=0.013  Score=51.19  Aligned_cols=106  Identities=17%  Similarity=0.243  Sum_probs=72.9

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcEE-eCCCCCCcccHHHHHHh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDF-INPDDEPNKSISELVKG  256 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~v-~~~~~~~~~~~~~~i~~  256 (375)
                      ...++.+...+||=+|.+ +|..++++|..+. -.+++.++.++++.+.++    +.|.+.. .....   -+..+.+.+
T Consensus        52 ~~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~~  127 (219)
T COG4122          52 RLLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLSR  127 (219)
T ss_pred             HHHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHHh
Confidence            345667788999999874 5888899999886 338999999999998876    4566442 11110   134444544


Q ss_pred             hcCCCCccEEE-Ecc--CChhhHHHHHHhcccCCeEEEEEc
Q 017201          257 ITHGMGVDYCF-ECT--GVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~~~~g~d~vi-d~~--g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...+ .||+|| |+.  -.++.++.++.+|+++ |.++.=.
T Consensus       128 ~~~~-~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN  166 (219)
T COG4122         128 LLDG-SFDLVFIDADKADYPEYLERALPLLRPG-GLIVADN  166 (219)
T ss_pred             ccCC-CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence            2233 799985 444  2346799999999997 8776543

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.82  E-value=0.0097  Score=54.25  Aligned_cols=130  Identities=22%  Similarity=0.312  Sum_probs=76.5

Q ss_pred             ccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          154 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       154 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      ...++|.+++.+    ......+|++..=+....+++|.+||=+|+| .|.+++..+| +|+.+|++++.++--.+.+++
T Consensus       130 ~~~i~lDPGlAF----GTG~HpTT~lcL~~Le~~~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~aa~e  203 (300)
T COG2264         130 ELNIELDPGLAF----GTGTHPTTSLCLEALEKLLKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEAARE  203 (300)
T ss_pred             ceEEEEcccccc----CCCCChhHHHHHHHHHHhhcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHHHHH
Confidence            556667666533    2333444443211122346799999999997 3777766554 577699999998866655542


Q ss_pred             ---c-CCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccCC
Q 017201          234 ---F-GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       234 ---l-g~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                         + +..... ...    .+  .......++.||+|+-+.=..   ...+.....++|+ |.+++.|...
T Consensus       204 Na~~N~v~~~~-~~~----~~--~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~  266 (300)
T COG2264         204 NARLNGVELLV-QAK----GF--LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE  266 (300)
T ss_pred             HHHHcCCchhh-hcc----cc--cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence               1 222100 000    00  001111224799999887433   2456788899997 9999998665

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.82  E-value=0.013  Score=49.05  Aligned_cols=98  Identities=20%  Similarity=0.231  Sum_probs=66.4

Q ss_pred             ccccccchhhhhhhhhhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       168 aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~-~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      ....|+...++...+.+...--.|.+|||+|+|. +|..++..++..|+ +|+++.++.+                    
T Consensus        21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------   79 (168)
T cd01080          21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------   79 (168)
T ss_pred             CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------
Confidence            4455655555554443444457899999999986 59988899988999 8888876521                    


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                        ++.+.+.      .+|+||.+++.+..+..  +.++++ -.++.++.+.
T Consensus        80 --~l~~~l~------~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr  119 (168)
T cd01080          80 --NLKEHTK------QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR  119 (168)
T ss_pred             --hHHHHHh------hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence              2222222      58999999998754333  346665 7788887665

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.81  E-value=0.0074  Score=59.85  Aligned_cols=74  Identities=18%  Similarity=0.228  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .+.+|++|+|+|.|.+|++++++++..|+ +|++.+.++++.+.++++|+..+. ...     ..+.+      .++|+|
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~-----~~~~l------~~~D~V   74 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSD-----AVQQI------ADYALV   74 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccc-----hHhHh------hcCCEE
Confidence            35678999999999999999999999999 999999777766667777875432 211     11222      157999


Q ss_pred             EEccCCh
Q 017201          267 FECTGVP  273 (375)
Q Consensus       267 id~~g~~  273 (375)
                      |.+.|-+
T Consensus        75 V~SpGi~   81 (488)
T PRK03369         75 VTSPGFR   81 (488)
T ss_pred             EECCCCC
Confidence            9999865

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.74  E-value=0.0076  Score=55.26  Aligned_cols=95  Identities=23%  Similarity=0.302  Sum_probs=60.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh------cCCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA------FGMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~------lg~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ..+|++||=+|+| .|.+++..++ +|+++|++++.++.-.+.+++      +.....+....    +.       . ..
T Consensus       159 ~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~----~~-------~-~~  224 (295)
T PF06325_consen  159 VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE----DL-------V-EG  224 (295)
T ss_dssp             SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS----CT-------C-CS
T ss_pred             ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec----cc-------c-cc
Confidence            6889999999886 3666665555 588899999999877665542      12221121111    11       1 13


Q ss_pred             CccEEEEccCChh---hHHHHHHhcccCCeEEEEEccCC
Q 017201          262 GVDYCFECTGVPS---LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       262 g~d~vid~~g~~~---~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .||+|+-+.-.+.   ..+...++++++ |.+++.|...
T Consensus       225 ~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  225 KFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             -EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             cCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            7999998886552   344566788997 9999988765

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.72  E-value=0.013  Score=53.09  Aligned_cols=107  Identities=21%  Similarity=0.309  Sum_probs=65.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-Ee----CCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI----NPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v~----~~~~~~~~~~~~~i~~~~  258 (375)
                      -.|+.|+|+|| +++|...+.-.-..|+ +++.+.+..++++.+    ++++... ++    |-.+  .++..+.+....
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~   86 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAI   86 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHH
Confidence            36789999999 8999865555556687 788888787777665    3444322 21    2222  122332221111


Q ss_pred             -CCCCccEEEEccCChh-------------------------hHHHHHHhcccCC-eEEEEEccCCC
Q 017201          259 -HGMGVDYCFECTGVPS-------------------------LLSEALETTKVGK-GKVIVIGVGVD  298 (375)
Q Consensus       259 -~~~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~iv~~g~~~~  298 (375)
                       .-.++|+.|++.|-..                         ....++..+++.+ |+|+.++...+
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence             1227999999987431                         2345666665554 89999976654

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.012  Score=53.57  Aligned_cols=78  Identities=18%  Similarity=0.290  Sum_probs=53.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhc-CCCCccEEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGIT-HGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~-~~~g~d~vid  268 (375)
                      +++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+  .+.+.+.+.... ...++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence            47899998 9999998888888899 99999998887776665555433 34433  133333333332 1236999999


Q ss_pred             ccCC
Q 017201          269 CTGV  272 (375)
Q Consensus       269 ~~g~  272 (375)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9973

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.63  E-value=0.0051  Score=53.59  Aligned_cols=102  Identities=21%  Similarity=0.381  Sum_probs=66.1

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhh----hcCCcEE-eCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGK----AFGMTDF-INPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~----~lg~~~v-~~~~~~~~~~~~~~i~  255 (375)
                      +.+.+.++||++||-+|+| .|..++-+|+..|.. +|++++++++-.+.++    .++...+ +...+     .   ..
T Consensus        64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd-----g---~~  134 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD-----G---SE  134 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES------G---GG
T ss_pred             HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc-----h---hh
Confidence            4567789999999999987 488888888888743 6999998876555543    4565432 11111     0   01


Q ss_pred             hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .+.....||.|+-+.+-+..-...++.|+++ |+++..
T Consensus       135 g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  135 GWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             TTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             ccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence            1222336999998887765556888999997 998874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK12742 oxidoreductase; Provisional

Probab=96.61  E-value=0.034  Score=49.12  Aligned_cols=77  Identities=21%  Similarity=0.240  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh-hhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ++++|||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+  .+.+.+.+.+   ...+|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~---~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK---SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH---hCCCcE
Confidence            4789999998 9999998888888899 7877654 44444333 44555433 23322  1223333322   125899


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        79 li~~ag~   85 (237)
T PRK12742         79 LVVNAGI   85 (237)
T ss_pred             EEECCCC
Confidence            9999874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.60  E-value=0.032  Score=55.64  Aligned_cols=47  Identities=21%  Similarity=0.174  Sum_probs=40.1

Q ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      ...+.+.|++|||+|+ |.+|...++.+...|+ +|++++++.++.+.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l  120 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL  120 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence            4567789999999998 9999998888888899 999999998876543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.55  E-value=0.012  Score=56.75  Aligned_cols=102  Identities=13%  Similarity=0.060  Sum_probs=64.7

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ..+--.+.+|||+|+|.+|.+++..+...|+.+++++.++.+|.+.+ .+++...++..         +.+.+...  .+
T Consensus       175 ~~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---------~~l~~~l~--~a  243 (414)
T PRK13940        175 QLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---------SELPQLIK--KA  243 (414)
T ss_pred             HhcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---------HHHHHHhc--cC
Confidence            33445688999999999999999988889987899999998886554 44552222222         11222222  59


Q ss_pred             cEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201          264 DYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      |+||.|++.+..+-. ...++...=.++.++.+.+
T Consensus       244 DiVI~aT~a~~~vi~-~~~~~~~~~~~iDLavPRd  277 (414)
T PRK13940        244 DIIIAAVNVLEYIVT-CKYVGDKPRVFIDISIPQA  277 (414)
T ss_pred             CEEEECcCCCCeeEC-HHHhCCCCeEEEEeCCCCC
Confidence            999999998743211 1112211125677776653

>PRK08017 oxidoreductase; Provisional

Probab=96.53  E-value=0.01  Score=53.18  Aligned_cols=77  Identities=22%  Similarity=0.362  Sum_probs=53.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccH---HHHHHhhcCCCCccEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSI---SELVKGITHGMGVDYC  266 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~---~~~i~~~~~~~g~d~v  266 (375)
                      +++||+|+ |.+|...++.+...|+ +|+++++++++.+.+++.++..+ .|..+  .+.+   .+.+.+...+ .+|.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~-~~~~i   78 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDN-RLYGL   78 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCC-CCeEE
Confidence            57999998 9999999988888898 89999999988887777776543 23332  1222   2223222223 68898


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      +.+.|.
T Consensus        79 i~~ag~   84 (256)
T PRK08017         79 FNNAGF   84 (256)
T ss_pred             EECCCC
Confidence            888763

>PRK06182 short chain dehydrogenase; Validated

Probab=96.53  E-value=0.015  Score=52.93  Aligned_cols=80  Identities=19%  Similarity=0.241  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      ++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+  .+++.+.+.+... ..++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence            4678999998 9999998888888899 99999999887765554454332 23333  2333333333221 2269999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999873

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.53  E-value=0.013  Score=50.14  Aligned_cols=98  Identities=17%  Similarity=0.174  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      .++++.+||-+|+|. |..++.+++.....+|++++.+++..++++    +.+.+.+ ....   .+..+    ......
T Consensus        42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~----~~~~~~  112 (187)
T PRK00107         42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE----FGQEEK  112 (187)
T ss_pred             hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh----CCCCCC
Confidence            345689999999863 667777776554349999999988776664    3444321 1111   12221    112337


Q ss_pred             ccEEEEccCC--hhhHHHHHHhcccCCeEEEEEc
Q 017201          263 VDYCFECTGV--PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       263 ~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ||+|+-....  +..++.+.++|+++ |+++.+-
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            9999864322  24677889999998 9988774

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.52  E-value=0.039  Score=47.99  Aligned_cols=101  Identities=14%  Similarity=0.122  Sum_probs=67.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCc---EEeCCCCCCcccHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISEL  253 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~~  253 (375)
                      +.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++-.+.++    ..+..   .++..+      ..+.
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~  136 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRG  136 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccC
Confidence            34666789999999999874 778888888764 228999999988766554    34432   222221      1111


Q ss_pred             HHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                         ......||.|+-+.......+...+.|+++ |+++..
T Consensus       137 ---~~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        137 ---LEKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             ---CccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence               111237999987766554556788999998 988653

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.018  Score=50.61  Aligned_cols=77  Identities=21%  Similarity=0.377  Sum_probs=50.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE--eCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .+|+|+|+ |++|...++.+...|+ +|+++++++++.+.+++++-..+  .|-.+  .+++.+.+..+. +.++|++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~-~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQ-GQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhh-cCCCCEEEE
Confidence            47899998 9999987777777898 99999998877765554432222  23222  122333333333 337999999


Q ss_pred             ccCC
Q 017201          269 CTGV  272 (375)
Q Consensus       269 ~~g~  272 (375)
                      +.|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            8753

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.019  Score=51.02  Aligned_cols=77  Identities=18%  Similarity=0.299  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF-INPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .+.+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+...+ .|..+   .+......+.  ..++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~--~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA--AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH--hCCCCEE
Confidence            5689999998 9999999998888998 8999999887765543 3444332 24333   2222222222  2268999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            999874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.42  E-value=0.036  Score=49.05  Aligned_cols=104  Identities=21%  Similarity=0.292  Sum_probs=74.0

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG  256 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~  256 (375)
                      ....+..+|++||=+|+| .|-+|..+++..|-.+|++++.+++-++.+++    .+...  .+..+       ++.+. 
T Consensus        44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~d-------Ae~LP-  114 (238)
T COG2226          44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGD-------AENLP-  114 (238)
T ss_pred             HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEec-------hhhCC-
Confidence            345566799999999877 59999999999986699999999988877754    23221  11111       11121 


Q ss_pred             hcCCCCccEEEEccCCh------hhHHHHHHhcccCCeEEEEEccCC
Q 017201          257 ITHGMGVDYCFECTGVP------SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ..++ .||+|.-+.|-.      .++.++.+.|+|+ |+++++....
T Consensus       115 f~D~-sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~  159 (238)
T COG2226         115 FPDN-SFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK  159 (238)
T ss_pred             CCCC-ccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence            3333 799987766632      4789999999998 9999887664

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.42  E-value=0.061  Score=46.37  Aligned_cols=105  Identities=20%  Similarity=0.321  Sum_probs=65.2

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~  255 (375)
                      +....+++++++||=+|+|. |..++.+++.....+|++++.+++..+.++    +++...  ++..      +..+.+.
T Consensus        32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~  104 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLA  104 (196)
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHh
Confidence            34556778999999998853 556667776653349999999998877765    345432  2222      2222222


Q ss_pred             hhcCCCCccE-EEEccCC-hhhHHHHHHhcccCCeEEEEEccC
Q 017201          256 GITHGMGVDY-CFECTGV-PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       256 ~~~~~~g~d~-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .+..  .+|. +++.... ...++.+.+.|+++ |+++.....
T Consensus       105 ~~~~--~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~  144 (196)
T PRK07402        105 QLAP--APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATASS  144 (196)
T ss_pred             hCCC--CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEeec
Confidence            2222  2344 4543322 35688899999997 998877533

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.047  Score=48.23  Aligned_cols=80  Identities=18%  Similarity=0.259  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC----CcEE-eCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG----MTDF-INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg----~~~v-~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++.    ...+ .|-.+  ..++.+.+.+... ..
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            4688999998 9999988877777899 899999988776543 2332    1111 23222  2333333433321 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus        82 ~~d~vi~~ag~   92 (237)
T PRK07326         82 GLDVLIANAGV   92 (237)
T ss_pred             CCCEEEECCCC
Confidence            69999998763

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.39  E-value=0.013  Score=50.70  Aligned_cols=99  Identities=21%  Similarity=0.307  Sum_probs=63.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      +..+..++.+||-+|+|. |..+..+|+. |. +|++++.+++-.+.+++.    +...+ ....   .++.    +...
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~----~~~~   92 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLN----NLTF   92 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChh----hCCc
Confidence            444566788999999975 7778888875 77 999999998876665432    22211 0000   1121    1111


Q ss_pred             CCCccEEEEccC----C----hhhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~~g----~----~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...||+|+.+..    .    ...+....++|+++ |.++.+.
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~  134 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA  134 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            236999987643    1    23577888999998 9865543

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.38  E-value=0.011  Score=51.95  Aligned_cols=101  Identities=20%  Similarity=0.269  Sum_probs=66.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i  254 (375)
                      +.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.++    +++.+.  ++..+      ..+. 
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~-  140 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQG-  140 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccC-
Confidence            44567889999999999874 7777788887653 26999999988777664    344432  22211      1111 


Q ss_pred             HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                        ......||+|+-............+.|+++ |+++..
T Consensus       141 --~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       141 --WEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             --CcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence              111237999876554444566788999997 987764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.38  E-value=0.027  Score=49.76  Aligned_cols=106  Identities=22%  Similarity=0.221  Sum_probs=75.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ....++.||++|+=.|.| .|.+++-||+..|. .+|+..+..++..+.++    +++....+....   .|    +.+.
T Consensus        87 ~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~D----v~~~  158 (256)
T COG2519          87 VARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GD----VREG  158 (256)
T ss_pred             HHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cc----cccc
Confidence            457899999999999887 48888899987764 59999999998888764    345433221111   12    3333


Q ss_pred             cCCCCccEEE-EccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          258 THGMGVDYCF-ECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       258 ~~~~g~d~vi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ..+..+|.|| |.---.+.++.+.+.|.++ |.++.+..+.
T Consensus       159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~v  198 (256)
T COG2519         159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTV  198 (256)
T ss_pred             ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCH
Confidence            3344799875 4444457899999999998 9999886544

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.015  Score=54.71  Aligned_cols=80  Identities=18%  Similarity=0.307  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+++|||+|+ |++|...++.+...|+ +|+.+++++++++.+    ++.|.+..   .|-.+  .+++.+.+.+... .
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence            5689999998 9999998888888999 899999998877543    34454332   23332  1222222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        83 g~iD~lVnnAG~   94 (330)
T PRK06139         83 GRIDVWVNNVGV   94 (330)
T ss_pred             CCCCEEEECCCc
Confidence            269999999973

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.35  E-value=0.01  Score=58.32  Aligned_cols=94  Identities=12%  Similarity=0.123  Sum_probs=63.4

Q ss_pred             hhcCCCCCCEEE----EECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-EEeCCCCCCcccHHHHHHhh
Q 017201          184 KEAKVEKGSSVA----VLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       184 ~~~~~~~g~~Vl----I~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ...++++|+.+|    |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+.+ .++|...   ..+.+.+...
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~  102 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL  102 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence            467888999988    8876 9999999999999999 899988766654444434444 3455443   2233333222


Q ss_pred             cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .               ..+...++.+.++ |+++.++...
T Consensus       103 ~---------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        103 Y---------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             H---------------HHHHHHHHhccCC-CEEEEEcccc
Confidence            1               2456677777776 8888887553

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.35  E-value=0.013  Score=50.09  Aligned_cols=81  Identities=15%  Similarity=0.228  Sum_probs=56.9

Q ss_pred             CCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-EeCCCCC-CcccHHHHHHhhcCCCCcc
Q 017201          190 KGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-FINPDDE-PNKSISELVKGITHGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga--g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v~~~~~~-~~~~~~~~i~~~~~~~g~d  264 (375)
                      ....|||+|+  |++|.+.+.-...-|+ .|+++.++-++++.+. ++|... -+|-.+. ....+...++..++| +.|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G-kld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG-KLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-ceE
Confidence            4568999976  9999987777777899 9999999999988776 677522 2333320 012234455555556 899


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      +.++..|-
T Consensus        84 ~L~NNAG~   91 (289)
T KOG1209|consen   84 LLYNNAGQ   91 (289)
T ss_pred             EEEcCCCC
Confidence            99998874

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.30  E-value=0.042  Score=51.04  Aligned_cols=91  Identities=26%  Similarity=0.465  Sum_probs=61.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      .+|.|+|+|.+|.+.+..++..|. .+|++.++++++.+.+++.|......      .+..+.+      .+.|+||.|+
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~------~~aDvViiav   74 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV------KGADLVILCV   74 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh------cCCCEEEECC
Confidence            579999999999988888877774 37999999999888888877532111      1122222      1589999999


Q ss_pred             CChh---hHHHHHHhcccCCeEEEEEcc
Q 017201          271 GVPS---LLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       271 g~~~---~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ....   .+......++++ ..++.+|.
T Consensus        75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         75 PVGASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             CHHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            7652   233333456665 66666553

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.28  E-value=0.036  Score=50.85  Aligned_cols=43  Identities=19%  Similarity=0.224  Sum_probs=37.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      ..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            4568999999999999999999999998999999998887655

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.28  E-value=0.061  Score=46.76  Aligned_cols=115  Identities=13%  Similarity=0.074  Sum_probs=66.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .|.+|||+|+|.+|...++.+...|+ +|++++.... ....+.+.|--..+. .++.    ...+      .++|+||-
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~----~~dl------~~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFD----ADIL------EGAFLVIA   75 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCC----HHHh------CCcEEEEE
Confidence            47799999999999999999999999 8998876543 222233333222222 2211    1111      26999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEE
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGT  318 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~  318 (375)
                      +++.++.-.......+.. |..+.+.... ...++-....+.+ .+++.-+
T Consensus        76 at~d~~ln~~i~~~a~~~-~ilvn~~d~~-e~~~f~~pa~~~~g~l~iais  124 (205)
T TIGR01470        76 ATDDEELNRRVAHAARAR-GVPVNVVDDP-ELCSFIFPSIVDRSPVVVAIS  124 (205)
T ss_pred             CCCCHHHHHHHHHHHHHc-CCEEEECCCc-ccCeEEEeeEEEcCCEEEEEE
Confidence            999874434455555554 6666553222 2333433333333 3555433

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.25  E-value=0.051  Score=53.31  Aligned_cols=80  Identities=15%  Similarity=0.217  Sum_probs=49.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKE-KGKAFGMTDF-INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~--~~~~-~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      .+|.++||+|+ |++|...++.+...|+ +|+++++++  ++.+ ...+++...+ .|-.+  .+...+.+..... ..+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~  284 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGG  284 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCC
Confidence            46889999988 9999998888888899 888887643  2222 2334554332 34333  1222222222221 126


Q ss_pred             ccEEEEccC
Q 017201          263 VDYCFECTG  271 (375)
Q Consensus       263 ~d~vid~~g  271 (375)
                      +|++|++.|
T Consensus       285 id~vi~~AG  293 (450)
T PRK08261        285 LDIVVHNAG  293 (450)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.025  Score=50.79  Aligned_cols=81  Identities=20%  Similarity=0.203  Sum_probs=52.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC-cEE--eCCCCCCcccHHHHHHhhc-C
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDF--INPDDEPNKSISELVKGIT-H  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~-~~v--~~~~~~~~~~~~~~i~~~~-~  259 (375)
                      ..+++|||+|+ |.+|...++.+...|+ +|+++.+++++.+.+.+    .+. ..+  .|-.+  .+++.+.+.++. .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   83 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE   83 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence            45789999988 9999998888888899 89999998887654422    121 112  23322  133333333321 1


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ...+|++|++.|.
T Consensus        84 ~~~~d~li~~ag~   96 (258)
T PRK06949         84 AGTIDILVNNSGV   96 (258)
T ss_pred             cCCCCEEEECCCC
Confidence            1268999999873

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.23  E-value=0.022  Score=56.23  Aligned_cols=79  Identities=25%  Similarity=0.392  Sum_probs=55.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHhhhcCCcEEeCCCCCCc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP---------------------WKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ..+++|+|+|+|+.|+.++..++..|+ +|++++..+                     ...++++++|.+..++..-  .
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v--~  215 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV--G  215 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe--C
Confidence            368899999999999999999999999 888887654                     2346677889876555421  0


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChh
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPS  274 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~  274 (375)
                      .++  .+..+.  .++|.||.++|..+
T Consensus       216 ~~~--~~~~~~--~~~D~vilAtGa~~  238 (467)
T TIGR01318       216 RDI--SLDDLL--EDYDAVFLGVGTYR  238 (467)
T ss_pred             Ccc--CHHHHH--hcCCEEEEEeCCCC
Confidence            111  111122  26999999999753

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.20  E-value=0.029  Score=50.01  Aligned_cols=79  Identities=22%  Similarity=0.198  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      +++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+...   ..|-.+  .+...+.+..... .
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999998888898 899999887765433    2234322   123222  1222222332221 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        81 ~~id~vi~~ag   91 (253)
T PRK08217         81 GQLNGLINNAG   91 (253)
T ss_pred             CCCCEEEECCC
Confidence            26899999987

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.20  E-value=0.061  Score=50.39  Aligned_cols=105  Identities=15%  Similarity=0.143  Sum_probs=69.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHH-HHHcCCCeEEEEcCChhhHHHhh-h----cCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDG-ARMHGAAKIIGIDKNPWKKEKGK-A----FGMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~l-a~~~G~~~V~~~~~~~~~~~~~~-~----lg~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .......+++|+|+|..|...+.. +...+.++|.+.++++++.+.+. .    ++.... ..     .+..+.+     
T Consensus       122 la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~-----~~~~~~~-----  190 (325)
T PRK08618        122 LAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VV-----NSADEAI-----  190 (325)
T ss_pred             hcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-Ee-----CCHHHHH-----
Confidence            334556789999999999876654 44668889999999988876443 2    343311 11     1233333     


Q ss_pred             CCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH
Q 017201          260 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV  305 (375)
Q Consensus       260 ~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~  305 (375)
                       .+.|+|+.++++... ... ..++++ -.+..+|........++.
T Consensus       191 -~~aDiVi~aT~s~~p-~i~-~~l~~G-~hV~~iGs~~p~~~E~~~  232 (325)
T PRK08618        191 -EEADIIVTVTNAKTP-VFS-EKLKKG-VHINAVGSFMPDMQELPS  232 (325)
T ss_pred             -hcCCEEEEccCCCCc-chH-HhcCCC-cEEEecCCCCcccccCCH
Confidence             168999999987633 334 888997 888889876543444554

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.026  Score=50.65  Aligned_cols=80  Identities=19%  Similarity=0.274  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      +|++|||+|+ |.+|...++.....|+ +|+++++++++.+.. ..++...+ .|..+  .+.+.+.+.+... ..++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            5789999998 9999998888888899 899999887765543 34443322 23333  1222222222211 126899


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998863

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.074  Score=47.36  Aligned_cols=102  Identities=19%  Similarity=0.180  Sum_probs=60.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHHH----hhhcCCcE---EeCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKEK----GKAFGMTD---FINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~-~~~~----~~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++.++.+ +.+.    ++..+...   ..|..+  .++..+.+.+....
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence            4678999998 9999988888888898 8988887643 2222    22223221   123333  12233233322211


Q ss_pred             -CCccEEEEccCCh-------------------hhHHHHHHhcccCCeEEEEEcc
Q 017201          261 -MGVDYCFECTGVP-------------------SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       261 -~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                       .++|++|.+.+..                   ..++.+...+... |+++.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence             2689999887642                   1334455555555 78887764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.17  E-value=0.029  Score=47.01  Aligned_cols=93  Identities=20%  Similarity=0.325  Sum_probs=61.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|.|+|+ |-+|...++=|+..|. .|++++++++|....+..-+  ..+++..     .+.+.+      .|+|+||++
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~-----~~a~~l------~g~DaVIsA   69 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT-----SLASDL------AGHDAVISA   69 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh-----hhHhhh------cCCceEEEe
Confidence            6889999 9999999999999999 99999999999864322211  1122221     121222      279999999


Q ss_pred             cCCh--h-------hHHHHHHhccc-CCeEEEEEccCC
Q 017201          270 TGVP--S-------LLSEALETTKV-GKGKVIVIGVGV  297 (375)
Q Consensus       270 ~g~~--~-------~~~~~~~~l~~-~~G~iv~~g~~~  297 (375)
                      .+..  +       ..+..+..++. +.-++..+|..+
T Consensus        70 ~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          70 FGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             ccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            9754  1       23345666655 235788887554

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.14  E-value=0.13  Score=42.82  Aligned_cols=90  Identities=19%  Similarity=0.213  Sum_probs=57.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.++|.|.+|...++-+...|+ +|++.++++++.+.+.+.|+..+-        +..+.+.      ..|+||-++.
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~--------s~~e~~~------~~dvvi~~v~   66 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVAD--------SPAEAAE------QADVVILCVP   66 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEES--------SHHHHHH------HBSEEEE-SS
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhh--------hhhhHhh------cccceEeecc
Confidence            368899999999976666677798 999999999999888877754331        2222222      3689998888


Q ss_pred             ChhhHHHH------HHhcccCCeEEEEEccCC
Q 017201          272 VPSLLSEA------LETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       272 ~~~~~~~~------~~~l~~~~G~iv~~g~~~  297 (375)
                      +.+.....      +..+.++ ..++.++..+
T Consensus        67 ~~~~v~~v~~~~~i~~~l~~g-~iiid~sT~~   97 (163)
T PF03446_consen   67 DDDAVEAVLFGENILAGLRPG-KIIIDMSTIS   97 (163)
T ss_dssp             SHHHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred             cchhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence            76555443      3335564 6666665443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.021  Score=51.45  Aligned_cols=85  Identities=18%  Similarity=0.138  Sum_probs=53.6

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-C-C--cE-EeCCCCCCcccHHHHHHhhcC
Q 017201          186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-G-M--TD-FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g-~--~~-v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ...-++.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+.+. . .  .. ..|..+  .+.+.+.+.+...
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~   82 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVE   82 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHH
Confidence            34457899999998 9999998888888899 899999887766544332 1 1  11 123332  1222222222211


Q ss_pred             -CCCccEEEEccCCh
Q 017201          260 -GMGVDYCFECTGVP  273 (375)
Q Consensus       260 -~~g~d~vid~~g~~  273 (375)
                       -.++|+||.+.|..
T Consensus        83 ~~~~~d~vi~~ag~~   97 (264)
T PRK12829         83 RFGGLDVLVNNAGIA   97 (264)
T ss_pred             HhCCCCEEEECCCCC
Confidence             12699999988743

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.018  Score=53.20  Aligned_cols=80  Identities=18%  Similarity=0.193  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC--cEE---eCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TDF---INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~--~~v---~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      +|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.  ...   .|-.+  .++..+.+.+... ..
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence            5789999998 9999998888888999 899999988876544 33432  111   23333  1223333332221 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      .+|++|++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            69999999984

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.12  E-value=0.034  Score=53.14  Aligned_cols=103  Identities=20%  Similarity=0.219  Sum_probs=69.1

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      +..+--.+.+|||+|+|-+|.+++......|..+|+++.++.+|.. +++++|+..+ ...     +..+.+    .  .
T Consensus       171 ~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~-----el~~~l----~--~  238 (414)
T COG0373         171 RIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE-----ELLEAL----A--E  238 (414)
T ss_pred             HHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH-----HHHHhh----h--h
Confidence            3444458899999999999999999999999889999999998875 4577885432 221     222222    2  4


Q ss_pred             ccEEEEccCChhh-H--HHHHHhcccCCe-EEEEEccCCC
Q 017201          263 VDYCFECTGVPSL-L--SEALETTKVGKG-KVIVIGVGVD  298 (375)
Q Consensus       263 ~d~vid~~g~~~~-~--~~~~~~l~~~~G-~iv~~g~~~~  298 (375)
                      +|+||-+++.+.. +  ....+.+..... .++.++.|.+
T Consensus       239 ~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRd  278 (414)
T COG0373         239 ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRD  278 (414)
T ss_pred             CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCC
Confidence            9999999987632 1  122233333212 5677777754

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.071  Score=47.44  Aligned_cols=81  Identities=17%  Similarity=0.131  Sum_probs=50.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  .+.+.+.+.+... 
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   81 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            35789999998 9999998888888898 899998887765433    2233221 1  23333  1222222222111 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|.+.|.
T Consensus        82 ~~~id~vi~~ag~   94 (250)
T PRK12939         82 LGGLDGLVNNAGI   94 (250)
T ss_pred             cCCCCEEEECCCC
Confidence            1269999999874

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.11  E-value=0.025  Score=51.24  Aligned_cols=99  Identities=21%  Similarity=0.150  Sum_probs=71.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +..+|.|+|+|.+|.-|+.+|.-+|+ +|+..+.+.+|+..+..+-...+ .-++.  ...+.+.++      +.|++|.
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~------~aDlvIg  237 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK------KADLVIG  237 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh------hccEEEE
Confidence            44567888999999999999999999 99999999999988876433332 22222  133444433      5899998


Q ss_pred             ccC--Ch---h-hHHHHHHhcccCCeEEEEEccCCC
Q 017201          269 CTG--VP---S-LLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       269 ~~g--~~---~-~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      ++-  +.   . ..++.++.++|+ +.++.+..-.+
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG  272 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG  272 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence            872  11   1 356789999997 99999875443

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.09  E-value=0.029  Score=57.68  Aligned_cols=77  Identities=26%  Similarity=0.359  Sum_probs=55.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHhhhcCCcEEeCCCCCCcc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPNK  248 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lg~~~v~~~~~~~~~  248 (375)
                      .+++|+|+|+|+.|+.++..++..|+ +|++++..+.                     +.++++++|++..++..-....
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 8999986652                     4566678888766654310001


Q ss_pred             cHHHHHHhhcCCCCccEEEEccCCh
Q 017201          249 SISELVKGITHGMGVDYCFECTGVP  273 (375)
Q Consensus       249 ~~~~~i~~~~~~~g~d~vid~~g~~  273 (375)
                      .+    .++.  .++|.||.++|..
T Consensus       388 ~~----~~l~--~~~DaV~latGa~  406 (639)
T PRK12809        388 TF----SDLT--SEYDAVFIGVGTY  406 (639)
T ss_pred             CH----HHHH--hcCCEEEEeCCCC
Confidence            22    1222  2699999999864

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.07  E-value=0.031  Score=49.85  Aligned_cols=80  Identities=19%  Similarity=0.206  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC--Cc--E-EeCCCCCCcccHHHHHHhh-cCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG--MT--D-FINPDDEPNKSISELVKGI-THGM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg--~~--~-v~~~~~~~~~~~~~~i~~~-~~~~  261 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+.  ..  . ..|-.+  .+++...+.+. ....
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG   80 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            4679999998 9999988888888899 8999999987765442 222  11  1 123222  22333333222 1122


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      .+|++|.+.|.
T Consensus        81 ~~d~vi~~ag~   91 (251)
T PRK07231         81 SVDILVNNAGT   91 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.03  E-value=0.1  Score=46.12  Aligned_cols=93  Identities=16%  Similarity=0.219  Sum_probs=60.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHhhhcCCcEEeCCCCCCcccHHHHH
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAA--KIIGIDKN----PWK--------KEKGKAFGMTDFINPDDEPNKSISELV  254 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~--~V~~~~~~----~~~--------~~~~~~lg~~~v~~~~~~~~~~~~~~i  254 (375)
                      -.+.+|+|+|+|+.|...+..+...|++  +++.++++    .++        .++++.++...    .+   .++.+.+
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~----~~---~~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK----TG---GTLKEAL   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc----cc---CCHHHHH
Confidence            4668999999999999988888888997  89999988    444        22344443211    01   1233333


Q ss_pred             HhhcCCCCccEEEEccCChhhH-HHHHHhcccCCeEEEEEccC
Q 017201          255 KGITHGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .      ++|++|++++.. .+ +..++.+.+. ..++.+..+
T Consensus        96 ~------~~dvlIgaT~~G-~~~~~~l~~m~~~-~ivf~lsnP  130 (226)
T cd05311          96 K------GADVFIGVSRPG-VVKKEMIKKMAKD-PIVFALANP  130 (226)
T ss_pred             h------cCCEEEeCCCCC-CCCHHHHHhhCCC-CEEEEeCCC
Confidence            1      489999999732 33 3566666675 666555433

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.03  E-value=0.06  Score=46.31  Aligned_cols=76  Identities=22%  Similarity=0.326  Sum_probs=49.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-c----CCcE-EeCCCCCCcccHHHHHHhhcCCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F----GMTD-FINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l----g~~~-v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      -++.+++|+|+ |.+|...+..+...|+ +|+.+.++.++.+.+.+ +    +... ..+..+  .++..+.+      .
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~------~   96 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI------K   96 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH------h
Confidence            36789999997 9999988777777887 99999998887655432 2    2221 122222  12222222      1


Q ss_pred             CccEEEEccCCh
Q 017201          262 GVDYCFECTGVP  273 (375)
Q Consensus       262 g~d~vid~~g~~  273 (375)
                      +.|+||.++...
T Consensus        97 ~~diVi~at~~g  108 (194)
T cd01078          97 GADVVFAAGAAG  108 (194)
T ss_pred             cCCEEEECCCCC
Confidence            589999988765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.03  E-value=0.076  Score=46.06  Aligned_cols=113  Identities=12%  Similarity=0.057  Sum_probs=64.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh-H-HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-K-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~-~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .|.+|||+|+|.+|...++.+...|+ +|++++....+ . +++.. +.-.. ....+...+    +      .++|+||
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~-~~~~~~~~~----l------~~adlVi   75 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRW-KQKEFEPSD----I------VDAFLVI   75 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEE-EecCCChhh----c------CCceEEE
Confidence            57899999999999988888888898 89888754322 1 22222 21111 112100011    1      2689999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEE
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGT  318 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~  318 (375)
                      -+++.+ .++..+...+.. +.++...... ...++-....+.+ .+++.-+
T Consensus        76 aaT~d~-elN~~i~~~a~~-~~lvn~~d~~-~~~~f~~Pa~~~~g~l~iaIs  124 (202)
T PRK06718         76 AATNDP-RVNEQVKEDLPE-NALFNVITDA-ESGNVVFPSALHRGKLTISVS  124 (202)
T ss_pred             EcCCCH-HHHHHHHHHHHh-CCcEEECCCC-ccCeEEEeeEEEcCCeEEEEE
Confidence            999988 556655555554 5666554332 2333433333323 3444433

>PLN02366 spermidine synthase

Probab=96.03  E-value=0.079  Score=49.07  Aligned_cols=104  Identities=15%  Similarity=0.044  Sum_probs=64.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCC--CcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDE--PNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~--~~~~~~~~i~~~~~~~g~  263 (375)
                      ....++|||+|+|. |.++..++++-+..+|++++.+++-.+.++++-..  ..++....  ...|..+.+++.. +..|
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~-~~~y  166 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAP-EGTY  166 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhcc-CCCC
Confidence            35578999998865 66777888887666899999998877777653110  00100000  0123333444332 3379


Q ss_pred             cEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          264 DYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       264 d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      |+||--...          .+.++.+.++|+++ |.++.-+
T Consensus       167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            998654322          23577889999998 9987543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.02  E-value=0.042  Score=47.69  Aligned_cols=35  Identities=26%  Similarity=0.314  Sum_probs=31.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            56889999999999999999999998899999876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.042  Score=49.52  Aligned_cols=83  Identities=17%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEECC-C-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cCCcEE----eCCCCCCcccHHHHHH
Q 017201          187 KVEKGSSVAVLGL-G-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTDF----INPDDEPNKSISELVK  255 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg~~~v----~~~~~~~~~~~~~~i~  255 (375)
                      .+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...    + ++...+    .|..+  .+.....+.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~   89 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALID   89 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHH
Confidence            3456789999987 6 799999999989999 8999988877654432    1 343222    23332  122333232


Q ss_pred             hhcC-CCCccEEEEccCC
Q 017201          256 GITH-GMGVDYCFECTGV  272 (375)
Q Consensus       256 ~~~~-~~g~d~vid~~g~  272 (375)
                      +... ...+|++|++.|.
T Consensus        90 ~~~~~~g~id~li~~ag~  107 (262)
T PRK07831         90 AAVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            2211 1268999999984

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.055  Score=47.45  Aligned_cols=77  Identities=21%  Similarity=0.299  Sum_probs=51.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      ++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+  .+.+.+.+.+.. +.++|++|.+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~~~d~vi~~   77 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLD-GEALDAAVYV   77 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhc-CCCCCEEEEC
Confidence            46899988 9999987777767798 8999999888777666655432 223333  123333222332 3379999998


Q ss_pred             cCC
Q 017201          270 TGV  272 (375)
Q Consensus       270 ~g~  272 (375)
                      .|.
T Consensus        78 ag~   80 (222)
T PRK06953         78 AGV   80 (222)
T ss_pred             CCc
Confidence            864

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.047  Score=49.40  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc----CCcE---EeCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMTD---FINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g~~~---v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++    +...   ..|-.+  .++..+.+.+...-
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence            4789999988 9999998888888899 8999999887765432 11    3221   123333  23333333333222


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|+++++.|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            269999999874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.97  E-value=0.018  Score=52.38  Aligned_cols=45  Identities=20%  Similarity=0.240  Sum_probs=40.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      .+|+++||+|+|+.+.+++.-++..|+.+|+++.|+.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            468999999999999999999999998899999999999776653

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=95.96  E-value=0.025  Score=51.12  Aligned_cols=133  Identities=21%  Similarity=0.257  Sum_probs=89.4

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC--------CcccHHHHHHh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE--------PNKSISELVKG  256 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~--------~~~~~~~~i~~  256 (375)
                      -++-.++..+|+.|.|..|+.++-.++.+|+ -|...+..+.+.+..+++|+..+-..+++        -.+++.++-.+
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence            3455678899999999999999999999999 89999988988888888887543222211        12334333222


Q ss_pred             hcC--CCCccEEEEccC---Ch--h-hHHHHHHhcccCCeEEEEEccCCCccccchH--HHhhcCCceEEEEe
Q 017201          257 ITH--GMGVDYCFECTG---VP--S-LLSEALETTKVGKGKVIVIGVGVDAMVPLNV--IALACGGRTLKGTT  319 (375)
Q Consensus       257 ~~~--~~g~d~vid~~g---~~--~-~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~~~~~~~~~~~~~~  319 (375)
                      +..  -+++|+||-+.-   .+  . ....+...++|+ ..++.+....+.+..+.-  .-...+++++.|..
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            221  237999998873   22  1 245788999997 999999766552322222  22345678888754

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.96  E-value=0.082  Score=47.67  Aligned_cols=99  Identities=21%  Similarity=0.245  Sum_probs=67.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .....+.++++||=+|+|. |..+..+++..+..+|++++.+++-.+.+++.-. ..++..      +..    .+....
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~~   92 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPPQ   92 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCCC
Confidence            3455678899999999863 6777888887754499999999988877765422 112221      111    112223


Q ss_pred             CccEEEEccCC------hhhHHHHHHhcccCCeEEEEE
Q 017201          262 GVDYCFECTGV------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       262 g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .+|+|+-...-      ...+..+.++|+++ |.++..
T Consensus        93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~  129 (258)
T PRK01683         93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ  129 (258)
T ss_pred             CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence            79999765432      24688899999998 988775

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.96  E-value=0.044  Score=45.08  Aligned_cols=95  Identities=26%  Similarity=0.237  Sum_probs=58.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-hhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ..+.+++|+|+|.+|...++.+...|..+|+++++++++.+. +++++... ....     .+..+.      -.++|+|
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~------~~~~Dvv   85 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL------LAEADLI   85 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc------cccCCEE
Confidence            557899999999999988888887764489999998877654 44455421 0011     111111      1269999


Q ss_pred             EEccCChhh----HHHHHHhcccCCeEEEEEcc
Q 017201          267 FECTGVPSL----LSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       267 id~~g~~~~----~~~~~~~l~~~~G~iv~~g~  295 (375)
                      |.+++....    .......++++ ..++.++.
T Consensus        86 i~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~  117 (155)
T cd01065          86 INTTPVGMKPGDELPLPPSLLKPG-GVVYDVVY  117 (155)
T ss_pred             EeCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence            999976521    11122345565 56665643

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.95  E-value=0.065  Score=48.83  Aligned_cols=95  Identities=20%  Similarity=0.278  Sum_probs=66.5

Q ss_pred             ccccchhhhhhhhhhhcC-CCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          170 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~-~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      .+||+....+.. .+..+ --.|.+|+|+|.|. +|.-.+.++...|+ +|+++.+...                     
T Consensus       137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~---------------------  193 (286)
T PRK14175        137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK---------------------  193 (286)
T ss_pred             CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------
Confidence            456655544443 34444 45899999999955 99999999999999 8988875321                     


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       ++.+.++      ..|+||.++|.+..+..  ..++++ ..++.+|...
T Consensus       194 -~l~~~~~------~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        194 -DMASYLK------DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             -hHHHHHh------hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence             2222222      58999999998865554  457886 8888888654

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.95  E-value=0.069  Score=44.31  Aligned_cols=88  Identities=11%  Similarity=0.100  Sum_probs=55.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|||+|+|.+|.--++.+...|+ +|++++  ++..+.+++++... ...+.     +.+.     +=.++|+||-
T Consensus        11 l~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~~-----dl~~a~lVia   76 (157)
T PRK06719         11 LHNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSND-----DIKDAHLIYA   76 (157)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cChh-----cCCCceEEEE
Confidence            357899999999999988887777898 888884  44333344454222 11221     1110     1126899999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEE
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~  292 (375)
                      +++.+ .++..+...++. ..++.
T Consensus        77 aT~d~-e~N~~i~~~a~~-~~~vn   98 (157)
T PRK06719         77 ATNQH-AVNMMVKQAAHD-FQWVN   98 (157)
T ss_pred             CCCCH-HHHHHHHHHHHH-CCcEE
Confidence            99887 556666656554 33443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.95  E-value=0.041  Score=49.60  Aligned_cols=79  Identities=15%  Similarity=0.136  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCc-EE--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMT-DF--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~-~v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      +++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. .+  .|-.+  .++..+.+.+... ...+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence            5789999988 9999988888888899 89999998887765543 3321 11  23222  1233333333221 1269


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |++|++.|
T Consensus        82 d~li~~ag   89 (263)
T PRK06200         82 DCFVGNAG   89 (263)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.05  Score=49.05  Aligned_cols=80  Identities=18%  Similarity=0.242  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-c--CCc-EE--eCCCCCCcccHHHHHHhhcCCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F--GMT-DF--INPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l--g~~-~v--~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ +  +.. ..  .|-.+  .+...+..........
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence            4678999988 9999988887778898 89999998877654432 1  211 11  22222  1222222222211236


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|.+.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.93  E-value=0.029  Score=51.38  Aligned_cols=43  Identities=28%  Similarity=0.264  Sum_probs=37.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      .+.++||+|+|+.+.+++.-+...|+++|+++.++.+|.+.+.
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La  166 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLV  166 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            5789999999999999888888999889999999988876553

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.92  E-value=0.02  Score=51.15  Aligned_cols=108  Identities=19%  Similarity=0.186  Sum_probs=66.2

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcE-E-eCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTD-F-INPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~-v-~~~~~~~~~~~~~~i  254 (375)
                      +...+++.||++|+=-|.|+ |.++..|++..|- .+|+..+.++++.+.++    ..|... + +..++...+.+    
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~----  106 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF----  106 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence            45578999999999998763 7777788887752 39999999999988775    355532 1 22222000112    


Q ss_pred             HhhcCCCCccEEEEccCC-hhhHHHHHHhc-ccCCeEEEEEccC
Q 017201          255 KGITHGMGVDYCFECTGV-PSLLSEALETT-KVGKGKVIVIGVG  296 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~-~~~~~~~~~~l-~~~~G~iv~~g~~  296 (375)
                      .+.. ...+|.||-=... ...++.+.+.| +++ |+++.+...
T Consensus       107 ~~~~-~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~  148 (247)
T PF08704_consen  107 DEEL-ESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC  148 (247)
T ss_dssp             STT--TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred             cccc-cCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence            1111 1368887544444 46899999999 887 999988533

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.90  E-value=0.043  Score=49.47  Aligned_cols=79  Identities=23%  Similarity=0.158  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcE-E--eCCCCCCcccHHHHHHhhcCC-CCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTD-F--INPDDEPNKSISELVKGITHG-MGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~~i~~~~~~-~g~  263 (375)
                      ++.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+++. +... .  .|-.+  .+...+.+.+.... ..+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            4789999988 9999988888888899 899999888776655442 3211 1  23322  12233333332211 268


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |++|++.|
T Consensus        81 d~li~~Ag   88 (262)
T TIGR03325        81 DCLIPNAG   88 (262)
T ss_pred             CEEEECCC
Confidence            99999986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.89  E-value=0.038  Score=51.67  Aligned_cols=80  Identities=18%  Similarity=0.197  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-----cC-Cc---EEeCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----FG-MT---DFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----lg-~~---~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|.++||+|+ +++|...++.....|+ +|+.+++++++.+.+.+     .+ ..   ...|-.+ +..+..+.+.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence            5889999998 9999976666666798 89999999988765421     22 11   1223221 11233444544444


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      +.++|++|++.|
T Consensus       130 ~~didilVnnAG  141 (320)
T PLN02780        130 GLDVGVLINNVG  141 (320)
T ss_pred             CCCccEEEEecC
Confidence            445779999886

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.89  E-value=0.077  Score=45.93  Aligned_cols=110  Identities=25%  Similarity=0.265  Sum_probs=67.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      --.|.+|+|+|.|.+|..+++.+...|+ +|++.++++++.+.+.+ +++.. ++..+     +    .   . ...|++
T Consensus        25 ~l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----l----~---~-~~~Dv~   89 (200)
T cd01075          25 SLEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAPEE-----I----Y---S-VDADVF   89 (200)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----h----c---c-ccCCEE
Confidence            3467899999999999999999999999 99999998887766544 46542 32211     1    1   1 158898


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc-chHH-HhhcCCceEEE
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP-LNVI-ALACGGRTLKG  317 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~-~~~~~~~~~~~  317 (375)
                      +-|......-...+..++.   +++.-+..+  +.+ .... .+..+++.+..
T Consensus        90 vp~A~~~~I~~~~~~~l~~---~~v~~~AN~--~~~~~~~~~~L~~~Gi~~~P  137 (200)
T cd01075          90 APCALGGVINDDTIPQLKA---KAIAGAANN--QLADPRHGQMLHERGILYAP  137 (200)
T ss_pred             EecccccccCHHHHHHcCC---CEEEECCcC--ccCCHhHHHHHHHCCCEEeC
Confidence            8665433233444555553   233333222  112 2222 24556777655

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.041  Score=49.70  Aligned_cols=80  Identities=13%  Similarity=0.074  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.    ..+... +  .|..+  .+...+.+.+... -
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999998888888899 9999999887654432    223221 2  23333  1222222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        86 ~~id~vi~~Ag~   97 (263)
T PRK07814         86 GRLDIVVNNVGG   97 (263)
T ss_pred             CCCCEEEECCCC
Confidence            269999998873

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.87  E-value=0.049  Score=50.49  Aligned_cols=107  Identities=10%  Similarity=0.035  Sum_probs=70.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHh-hhcC---CcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKG-KAFG---MTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ......+++|+|+|..|.+.++.+. ..+.++|.+.++++++.+.+ .++.   .....       .+..+.+.      
T Consensus       121 a~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~-------~~~~~av~------  187 (304)
T PRK07340        121 APAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEP-------LDGEAIPE------  187 (304)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEE-------CCHHHHhh------
Confidence            3356678999999999998877776 46777899999998886644 3332   22111       12333331      


Q ss_pred             CccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhh
Q 017201          262 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA  309 (375)
Q Consensus       262 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~  309 (375)
                      +.|+|+.++.+...+-..+  ++++ -.+..+|........++...+.
T Consensus       188 ~aDiVitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p~~~El~~~~~~  232 (304)
T PRK07340        188 AVDLVVTATTSRTPVYPEA--ARAG-RLVVAVGAFTPDMAELAPRTVR  232 (304)
T ss_pred             cCCEEEEccCCCCceeCcc--CCCC-CEEEecCCCCCCcccCCHHHHh
Confidence            6999999997653322333  6886 8899998776445566655443

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.86  E-value=0.19  Score=44.55  Aligned_cols=35  Identities=37%  Similarity=0.504  Sum_probs=30.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus        10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34689999999999999988888999899999855

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.046  Score=48.91  Aligned_cols=80  Identities=18%  Similarity=0.176  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++++..+...++....  .  .|-.+  .+.+.+.+.+... ..++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            5789999998 9999987777777898 8999998876655444432211  1  23322  1233332322211 1268


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|.+.|.
T Consensus        91 d~vi~~ag~   99 (255)
T PRK06841         91 DILVNSAGV   99 (255)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.063  Score=48.23  Aligned_cols=82  Identities=18%  Similarity=0.243  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhh-HHH----hhhcCC-c-EE--eCCCCCCcccHHHHHHh
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWK-KEK----GKAFGM-T-DF--INPDDEPNKSISELVKG  256 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~-~~~----~~~lg~-~-~v--~~~~~~~~~~~~~~i~~  256 (375)
                      +..+.+|||+|+ |++|...++-+... |+ +|+.+++++++ .+.    +++.+. . .+  .|-.+  .++..+.+.+
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~   81 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA   81 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence            456778999998 99999877655444 57 89999988775 332    233332 1 12  23322  1333333333


Q ss_pred             hcCCCCccEEEEccCC
Q 017201          257 ITHGMGVDYCFECTGV  272 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~  272 (375)
                      .....++|++|.+.|.
T Consensus        82 ~~~~g~id~li~~ag~   97 (253)
T PRK07904         82 AFAGGDVDVAIVAFGL   97 (253)
T ss_pred             HHhcCCCCEEEEeeec
Confidence            3222379999887754

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.82  E-value=0.039  Score=56.87  Aligned_cols=78  Identities=24%  Similarity=0.319  Sum_probs=52.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHhhhcCCcEEeCCCCCCc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ..|.+|+|+|+|+.|+.|+..++..|+ +|++++..+.                     ..++++++|.+...+..--.+
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            358899999999999999999999999 8999986532                     244566778765443211000


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCCh
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVP  273 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~  273 (375)
                      ..+ +.+   .  .+||.||.++|..
T Consensus       404 i~~-~~~---~--~~~DavilAtGa~  423 (654)
T PRK12769        404 ISL-ESL---L--EDYDAVFVGVGTY  423 (654)
T ss_pred             CCH-HHH---H--hcCCEEEEeCCCC
Confidence            111 111   1  2699999998853

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.051  Score=47.92  Aligned_cols=80  Identities=19%  Similarity=0.158  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----hhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDF-INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++++...    ++..+...+ .|..+  .+++.+.+.+... -.+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence            4789999998 9999988888888899 89999987765332    222333322 22222  1223222222211 126


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+||++.+.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            8999998863

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.051  Score=49.52  Aligned_cols=80  Identities=14%  Similarity=0.171  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-E---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-D---FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-~---v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.... .   ..|-.+  .+.+.+.+..... -.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            3578999998 9999988888888898 899999998877655443211 1   123333  1223333332211 1258


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        80 d~vv~~ag~   88 (277)
T PRK06180         80 DVLVNNAGY   88 (277)
T ss_pred             CEEEECCCc
Confidence            999999875

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.79  E-value=0.084  Score=46.95  Aligned_cols=105  Identities=18%  Similarity=0.171  Sum_probs=67.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...+..++++||-+|.| .|..++.+|+..+ ..+|++++.+++..+.+++    .|...-+....   .+..+.+.++.
T Consensus        62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l~  137 (234)
T PLN02781         62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQLL  137 (234)
T ss_pred             HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHHH
Confidence            45567788999999875 4666777777653 3499999999988877653    45422111111   23334444432


Q ss_pred             C---CCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEE
Q 017201          259 H---GMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       259 ~---~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .   ...||+||--...   ...++.++++++++ |.++.-
T Consensus       138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d  177 (234)
T PLN02781        138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD  177 (234)
T ss_pred             hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence            1   2479999755432   24678899999997 877653

>PRK04457 spermidine synthase; Provisional

Probab=95.78  E-value=0.13  Score=46.53  Aligned_cols=95  Identities=13%  Similarity=0.129  Sum_probs=64.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CC----c--EEeCCCCCCcccHHHHHHhhcCCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM----T--DFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~----~--~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .++.+||++|+|+ |.++..+++.....+|++++.+++-.+.+++. +.    .  .++.      .|..+.+.+. . .
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~-~  135 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-R-H  135 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-C-C
Confidence            4568999999874 77888888877544999999999998888753 22    1  1222      2333444432 2 3


Q ss_pred             CccEEE-EccCC---------hhhHHHHHHhcccCCeEEEEE
Q 017201          262 GVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       262 g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .||+|+ |....         .+.++.+.+.|+++ |.++.-
T Consensus       136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            699985 43211         35788899999998 988763

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.053  Score=49.18  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=51.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC-CcE-EeCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +.++ ... ..|-.+  .+++.+.+.+... ..++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            578999998 9999988877777899 899999988876544 3344 222 223333  2233333333221 126999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        82 li~~ag~   88 (273)
T PRK07825         82 LVNNAGV   88 (273)
T ss_pred             EEECCCc
Confidence            9999873

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.049  Score=48.76  Aligned_cols=73  Identities=12%  Similarity=0.049  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcCCCC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      +.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.    ..+...   ..|-.+     . +.+.+...+ +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~-~~~~~~~~~-~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-----A-IDRAQAAEW-D   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-----H-HHHHHHhcC-C
Confidence            458999998 9999999988888998 8999998876654443    223221   123322     1 122222233 7


Q ss_pred             ccEEEEccC
Q 017201          263 VDYCFECTG  271 (375)
Q Consensus       263 ~d~vid~~g  271 (375)
                      +|++|++.|
T Consensus        74 id~vi~~ag   82 (257)
T PRK09291         74 VDVLLNNAG   82 (257)
T ss_pred             CCEEEECCC
Confidence            999999987

>PRK07574 formate dehydrogenase; Provisional

Probab=95.71  E-value=0.11  Score=49.53  Aligned_cols=89  Identities=20%  Similarity=0.305  Sum_probs=58.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+..+.++....        .++.+.++      ..|+|+-+
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~------~aDvV~l~  255 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLVS------VCDVVTIH  255 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHhh------cCCEEEEc
Confidence            67889999999999999999999999 99999987644444444553211        12222221      46888777


Q ss_pred             cCChhh----H-HHHHHhcccCCeEEEEEc
Q 017201          270 TGVPSL----L-SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       270 ~g~~~~----~-~~~~~~l~~~~G~iv~~g  294 (375)
                      ....+.    + ...+..++++ ..++.++
T Consensus       256 lPlt~~T~~li~~~~l~~mk~g-a~lIN~a  284 (385)
T PRK07574        256 CPLHPETEHLFDADVLSRMKRG-SYLVNTA  284 (385)
T ss_pred             CCCCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence            753321    1 2456677776 7777665

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.70  E-value=0.034  Score=50.83  Aligned_cols=94  Identities=18%  Similarity=0.151  Sum_probs=58.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      ..+.++||+|+|++|.+++..+...|+.+|++++++.++.+.+. .++....+.. +   .+..    +..  .++|+||
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~----~~~--~~~DivI  190 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQ----EEL--ADFDLII  190 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccch----hcc--ccCCEEE
Confidence            46788999999999999999999999669999999988876553 3332100100 1   0010    111  2689999


Q ss_pred             EccCChhh-----HHHHHHhcccCCeEEEEE
Q 017201          268 ECTGVPSL-----LSEALETTKVGKGKVIVI  293 (375)
Q Consensus       268 d~~g~~~~-----~~~~~~~l~~~~G~iv~~  293 (375)
                      +++.....     .......+.+. ..++.+
T Consensus       191 naTp~g~~~~~~~~~~~~~~l~~~-~~v~Di  220 (278)
T PRK00258        191 NATSAGMSGELPLPPLPLSLLRPG-TIVYDM  220 (278)
T ss_pred             ECCcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence            99864310     01223556665 566555

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.70  E-value=0.11  Score=42.47  Aligned_cols=98  Identities=21%  Similarity=0.239  Sum_probs=65.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC---CcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE---PNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~---~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .+|+|+|+ |.+|.+++++.|..++ -|..++.++...     -.+..+++..+-   .++...+++.+...++++|.||
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            47899988 9999999999999999 888888665433     233344443320   1233445555556777999999


Q ss_pred             EccCChh------------------------h--HHHHHHhcccCCeEEEEEccC
Q 017201          268 ECTGVPS------------------------L--LSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       268 d~~g~~~------------------------~--~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ...|+-.                        .  -..+-..|+++ |-+.+.|..
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk  131 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK  131 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence            8776421                        1  12345678887 887777643

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.67  E-value=0.024  Score=43.40  Aligned_cols=88  Identities=24%  Similarity=0.276  Sum_probs=54.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++...   +..+  +..... .     ..+.    +.  =.++|+||-+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~----~~--l~~~~lV~~a   67 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFE----ED--LDGADLVFAA   67 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-G----GG--CTTESEEEE-
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHH----HH--HhhheEEEec
Confidence            57899999999999999999999998 999998774   1111  111111 1     1121    11  1269999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .+.+..-+......+.. +.++.....
T Consensus        68 t~d~~~n~~i~~~a~~~-~i~vn~~D~   93 (103)
T PF13241_consen   68 TDDPELNEAIYADARAR-GILVNVVDD   93 (103)
T ss_dssp             SS-HHHHHHHHHHHHHT-TSEEEETT-
T ss_pred             CCCHHHHHHHHHHHhhC-CEEEEECCC
Confidence            98874444455555555 777777543

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.65  E-value=0.029  Score=48.71  Aligned_cols=101  Identities=21%  Similarity=0.271  Sum_probs=66.7

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHH
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVK  255 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~  255 (375)
                      ..+.....+||-+|.+ +|..++.+|+.+  +. +|+.++.++++.+.++    +.|...   ++..      +..+.+.
T Consensus        40 l~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g------da~~~l~  111 (205)
T PF01596_consen   40 LVRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIEG------DALEVLP  111 (205)
T ss_dssp             HHHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-------HHHHHH
T ss_pred             HHHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe------ccHhhHH
Confidence            4455677899999985 588889999877  45 9999999999988775    345422   3322      3344444


Q ss_pred             hhcCC---CCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHG---MGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~---~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ++...   ..||+||--....   ..++.++.+|+++ |.++.=.
T Consensus       112 ~l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN  155 (205)
T PF01596_consen  112 ELANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN  155 (205)
T ss_dssp             HHHHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred             HHHhccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence            44322   2699985433332   3577899999996 7766543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK08317 hypothetical protein; Provisional

Probab=95.65  E-value=0.1  Score=46.01  Aligned_cols=102  Identities=24%  Similarity=0.342  Sum_probs=68.7

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhc----CC-cEEeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF----GM-TDFINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l----g~-~~v~~~~~~~~~~~~~~i~  255 (375)
                      +.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++.    +. ..+...+.   ...     
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----   81 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----   81 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence            34567889999999999976 888889998873 33899999999888877654    11 11221111   010     


Q ss_pred             hhcCCCCccEEEEcc-----CC-hhhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHGMGVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .+.. ..+|+|+-..     .. ...+..+.++|+++ |.++...
T Consensus        82 ~~~~-~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  124 (241)
T PRK08317         82 PFPD-GSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD  124 (241)
T ss_pred             CCCC-CCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence            1122 3689987542     22 24678899999998 9888764

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.057  Score=49.76  Aligned_cols=80  Identities=18%  Similarity=0.235  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+...+.+..... -
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  115 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI  115 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4578999988 9999988887777898 9999999887765432    223221 2  23222  1223333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|++.|.
T Consensus       116 g~id~li~~AG~  127 (293)
T PRK05866        116 GGVDILINNAGR  127 (293)
T ss_pred             CCCCEEEECCCC
Confidence            268999999874

>PRK06196 oxidoreductase; Provisional

Probab=95.64  E-value=0.068  Score=49.73  Aligned_cols=79  Identities=18%  Similarity=0.277  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC-CcE-EeCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG-MTD-FINPDDEPNKSISELVKGITH-GMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d  264 (375)
                      .+.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++. ... ..|-.+  .+++.+.+.+... ..++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence            4689999998 9999988877777898 8999999887765432 222 221 123322  1223333333222 13699


Q ss_pred             EEEEccC
Q 017201          265 YCFECTG  271 (375)
Q Consensus       265 ~vid~~g  271 (375)
                      ++|++.|
T Consensus       102 ~li~nAg  108 (315)
T PRK06196        102 ILINNAG  108 (315)
T ss_pred             EEEECCC
Confidence            9999987

>PRK06484 short chain dehydrogenase; Validated

Probab=95.63  E-value=0.14  Score=51.31  Aligned_cols=81  Identities=19%  Similarity=0.226  Sum_probs=53.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcE---EeCCCCCCcccHHHHHHhhcCC-CC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD---FINPDDEPNKSISELVKGITHG-MG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~g  262 (375)
                      ..|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++...   ..|-.+  .++..+.+.+.... ..
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR  343 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence            46788999988 9999988887778898 99999998877765543 44322   123333  12333333332211 25


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus       344 id~li~nAg~  353 (520)
T PRK06484        344 LDVLVNNAGI  353 (520)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.63  E-value=0.22  Score=43.45  Aligned_cols=98  Identities=18%  Similarity=0.242  Sum_probs=63.0

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG  256 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~  256 (375)
                      ....+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.++    +++...  +...+      ..+   .
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~---~  138 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD------GWK---G  138 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC------ccc---C
Confidence            4567889999999999864 55566666664 3 8999999987766554    334322  22111      111   1


Q ss_pred             hcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          257 ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      +.....||+|+-............+.|+++ |+++..
T Consensus       139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~  174 (212)
T PRK00312        139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP  174 (212)
T ss_pred             CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence            112236999876655444566788999997 887754

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.62  E-value=0.077  Score=42.21  Aligned_cols=88  Identities=23%  Similarity=0.311  Sum_probs=55.0

Q ss_pred             EEEECC-CHHHHHHHHHHHHcC--CCeEEEEcCCh--hhH-HHhhhcCCcEEeCCCCCCcccHHHHHH------------
Q 017201          194 VAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNP--WKK-EKGKAFGMTDFINPDDEPNKSISELVK------------  255 (375)
Q Consensus       194 VlI~Ga-g~~G~~ai~la~~~G--~~~V~~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~i~------------  255 (375)
                      |.|+|+ |.+|..++++.+...  + +|++.+-..  +++ +.+++|.+..+...++    ...+.++            
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v   75 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV   75 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence            578899 999999999999997  5 777766433  332 3456788887765543    2222222            


Q ss_pred             --------hhcCCCCccEEEEccCChhhHHHHHHhcccC
Q 017201          256 --------GITHGMGVDYCFECTGVPSLLSEALETTKVG  286 (375)
Q Consensus       256 --------~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~  286 (375)
                              ++.....+|+|+.+..+-..+...+..+..+
T Consensus        76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g  114 (129)
T PF02670_consen   76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG  114 (129)
T ss_dssp             EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred             EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence                    2222236788887776665777777777764

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.07  Score=47.92  Aligned_cols=78  Identities=12%  Similarity=0.058  Sum_probs=49.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cC----CcE-EeCCCCCCcccHHHHHHhhcCC-CC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FG----MTD-FINPDDEPNKSISELVKGITHG-MG  262 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg----~~~-v~~~~~~~~~~~~~~i~~~~~~-~g  262 (375)
                      +.+|||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +.    ... ..|-.+  .+.+.+.+.+.... ..
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence            468999988 9999987777777899 89999998877654432 21    111 123322  12333333332211 24


Q ss_pred             ccEEEEccC
Q 017201          263 VDYCFECTG  271 (375)
Q Consensus       263 ~d~vid~~g  271 (375)
                      +|++|++.|
T Consensus        79 id~lv~~ag   87 (257)
T PRK07024         79 PDVVIANAG   87 (257)
T ss_pred             CCEEEECCC
Confidence            899999886

>PLN02735 carbamoyl-phosphate synthase

Probab=95.58  E-value=0.16  Score=55.40  Aligned_cols=101  Identities=21%  Similarity=0.239  Sum_probs=61.0

Q ss_pred             ccchhhhhhhhhhhcCCCCCCEEEEECCCHH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-
Q 017201          172 SCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV-----------GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-  239 (375)
Q Consensus       172 ~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~-----------G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-  239 (375)
                      ..+.+.||.+.....+-..=.+|||+|+|++           |..+++.++..|+ +|+.+++++........+ ++.+ 
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~y   81 (1102)
T PLN02735          4 ADTVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTY   81 (1102)
T ss_pred             cccceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEE
Confidence            3456677876543333333468999999874           4458888888899 999999887542111111 3332 


Q ss_pred             eCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHH
Q 017201          240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  280 (375)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~  280 (375)
                      +.+.+   .+.   +.++....++|.|+-+.|+...+..+.
T Consensus        82 i~p~~---~e~---v~~ii~~e~~D~Iip~~gg~~gl~la~  116 (1102)
T PLN02735         82 IAPMT---PEL---VEQVIAKERPDALLPTMGGQTALNLAV  116 (1102)
T ss_pred             eCCCC---HHH---HHHHHHHhCCCEEEECCCchhhHHHHH
Confidence            23333   233   333223347999999888765554444

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.57  E-value=0.17  Score=44.40  Aligned_cols=104  Identities=20%  Similarity=0.189  Sum_probs=62.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh------hhH--HHhhhcC---------------C-cEEeCCCCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP------WKK--EKGKAFG---------------M-TDFINPDDE  245 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~------~~~--~~~~~lg---------------~-~~v~~~~~~  245 (375)
                      +..+|+|+|.|++|.+++..+.+.|..+++.++-+.      .|+  ......|               + .+|...++ 
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~-  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND-  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence            567899999999999999999999998888887432      221  1111111               1 11111111 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHH-HhcccCCeEEEEEccCCC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL-ETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~-~~l~~~~G~iv~~g~~~~  298 (375)
                        --..+.+.++... +||+||||.-+-..--.++ .|.+.+ =.++..+..++
T Consensus       108 --f~t~en~~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~  157 (263)
T COG1179         108 --FITEENLEDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG  157 (263)
T ss_pred             --hhCHhHHHHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence              0112344445555 8999999997654433333 455654 56666654443

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.06  Score=48.34  Aligned_cols=82  Identities=20%  Similarity=0.178  Sum_probs=51.1

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH----HhhhcCCcE---EeCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE----KGKAFGMTD---FINPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~----~~~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      -.+.+++|+|+ |.+|...++.+...|+++|+++++++++..    .+++.+...   ..|-.+  .+.+.+.+..... 
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            35788999998 999999888888889944999998876554    223344332   123333  1222222222211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        82 ~g~id~li~~ag~   94 (260)
T PRK06198         82 FGRLDALVNAAGL   94 (260)
T ss_pred             hCCCCEEEECCCc
Confidence            1269999999874

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.069  Score=47.50  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+  .++....+..... ..++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4679999998 9999998888888899 899999887665443 3445432 1  23222  1222222222211 1268


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        82 d~vi~~ag~   90 (249)
T PRK06500         82 DAVFINAGV   90 (249)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.54  E-value=0.091  Score=46.48  Aligned_cols=80  Identities=20%  Similarity=0.238  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.+|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+....   .|..+  ...+...+.+... -
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            3578999998 9999988888888899 799999988775433    23343221   23332  1223333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|.+|.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            258999999864

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.53  E-value=0.098  Score=46.56  Aligned_cols=80  Identities=23%  Similarity=0.288  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD-F--INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      .|+++||+|+ |.+|...++.+...|+ +|+.+++++..  .+.+++++... +  .|-.+  .+++...+.+... ..+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence            5789999998 9999988887778899 89999876522  22333444321 1  23332  2333333333221 126


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus        81 ~d~li~~ag~   90 (248)
T TIGR01832        81 IDILVNNAGI   90 (248)
T ss_pred             CCEEEECCCC
Confidence            9999998864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.53  E-value=0.08  Score=50.84  Aligned_cols=90  Identities=22%  Similarity=0.287  Sum_probs=56.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhh--cC--CcE-EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKA--FG--MTD-FINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~--lg--~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      |+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+  .+  ... .+|..+     .. .+.++..  +.|+||
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~-~l~~~~~--~~dvVi   72 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----PE-SLAELLR--GCDVVI   72 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----HH-HHHHHHT--TSSEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----HH-HHHHHHh--cCCEEE
Confidence            78999999999988888877643 89999999999776643  22  222 233333     22 2444443  469999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEE
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~  292 (375)
                      +|+|.......+-.|+..+ -.++.
T Consensus        73 n~~gp~~~~~v~~~~i~~g-~~yvD   96 (386)
T PF03435_consen   73 NCAGPFFGEPVARACIEAG-VHYVD   96 (386)
T ss_dssp             E-SSGGGHHHHHHHHHHHT--EEEE
T ss_pred             ECCccchhHHHHHHHHHhC-CCeec
Confidence            9998654445555666665 66666

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.05  Score=49.24  Aligned_cols=77  Identities=18%  Similarity=0.287  Sum_probs=49.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEEE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYCF  267 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~vi  267 (375)
                      +.+++|+|+ |.+|...++.+...|+ +|+++++++++.+...  +... ..|-.+  .+++.+.+..... -..+|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence            568999988 9999987777777898 8999998876654321  2222 123332  2333333333221 12589999


Q ss_pred             EccCC
Q 017201          268 ECTGV  272 (375)
Q Consensus       268 d~~g~  272 (375)
                      ++.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99974

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.51  E-value=0.088  Score=49.04  Aligned_cols=70  Identities=21%  Similarity=0.234  Sum_probs=48.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|||+|+ |-+|...++.+...|+ +|++++++.++...+...+.+.+. |..+  ...+.+.+    .  ++|+||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d--~~~l~~al----~--g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL--PETLPPSF----K--GVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC--HHHHHHHH----C--CCCEEEECC
Confidence            6999998 9999998888888898 899999987766555555665433 2222  11222222    2  689999987


Q ss_pred             C
Q 017201          271 G  271 (375)
Q Consensus       271 g  271 (375)
                      +
T Consensus        73 ~   73 (317)
T CHL00194         73 T   73 (317)
T ss_pred             C
Confidence            5

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.22  Score=45.17  Aligned_cols=77  Identities=17%  Similarity=0.236  Sum_probs=48.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE----EeCCCCCCcccHHHHHHhhc-CCCC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD----FINPDDEPNKSISELVKGIT-HGMG  262 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~----v~~~~~~~~~~~~~~i~~~~-~~~g  262 (375)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+...    ..|-.+  .+...+.+.+.. ...+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence            6899988 9999998888888898 899998887665433    2233321    233333  122222222221 1125


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            8999999974

>PRK08264 short chain dehydrogenase; Validated

Probab=95.47  E-value=0.092  Score=46.41  Aligned_cols=75  Identities=21%  Similarity=0.300  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDF-INPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .+.++||+|+ |.+|...++.+...|+.+|++++++.++.+.   .+.  ..+ .|-.+   .+-...+.+..  ..+|+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~--~~id~   76 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAA--SDVTI   76 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhc--CCCCE
Confidence            5678999988 9999998888888897679999988776542   222  111 23322   22222222221  25899


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|.+.|.
T Consensus        77 vi~~ag~   83 (238)
T PRK08264         77 LVNNAGI   83 (238)
T ss_pred             EEECCCc
Confidence            9999976

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.074  Score=50.01  Aligned_cols=80  Identities=16%  Similarity=0.138  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.+|||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.|....   .|-.+  .+++.+.+.+... -
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence            4678999998 9999998888888899 899999988776543    23454321   23333  1233332222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|++.|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            269999999874

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.083  Score=47.30  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    ..+...   ..|-.+  .+.+.+.+.+... -
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4789999998 9999988888888899 8999998877665432    223221   123332  1233333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        85 g~id~lv~~ag~   96 (253)
T PRK05867         85 GGIDIAVCNAGI   96 (253)
T ss_pred             CCCCEEEECCCC
Confidence            269999998873

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.076  Score=47.53  Aligned_cols=80  Identities=20%  Similarity=0.161  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+... +  .|-.+  .+...+.+.+... -
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF   81 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4678999988 9999988888888899 8999998887765432    233322 1  23222  1222222332221 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|++.|.
T Consensus        82 ~~id~li~~ag~   93 (254)
T PRK07478         82 GGLDIAFNNAGT   93 (254)
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.44  E-value=0.14  Score=48.48  Aligned_cols=95  Identities=17%  Similarity=0.266  Sum_probs=64.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEc--CChhhH-HHhhhcCCcEEeCCCCCCcccHHHHHHh---------
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMH--GAAKIIGID--KNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKG---------  256 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~--~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~---------  256 (375)
                      .+|.|+|+ |++|..+++..+..  .+ +|++++  ++.+++ +.++++++..+.-.++    .....+++         
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v   76 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV   76 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence            47899997 99999999988766  45 777775  444444 4456788887654432    11222222         


Q ss_pred             ---------hcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEE
Q 017201          257 ---------ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       257 ---------~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~  292 (375)
                               +.....+|+|+.+.++...+...+.+++.+ -++.+
T Consensus        77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence                     222236999999998776788888999875 55444

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.074  Score=47.60  Aligned_cols=79  Identities=15%  Similarity=0.148  Sum_probs=49.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-Ee--CCCCCCcccHHHHHHhhcC-CC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-FI--NPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      |+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... ++  |-.+  .+...+.+.+... ..
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence            568999988 9999998888888899 8999998877655432    223221 22  3222  1233333322211 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      .+|++|++.|.
T Consensus        78 ~id~lI~~ag~   88 (252)
T PRK07677         78 RIDALINNAAG   88 (252)
T ss_pred             CccEEEECCCC
Confidence            58999999873

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.40  E-value=0.11  Score=46.59  Aligned_cols=80  Identities=15%  Similarity=0.158  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    ++.+....   .|-.+  ...+.+.+.+... -
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   82 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 9999988888888899 899999888665432    33444321   13222  1222222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|.+.|.
T Consensus        83 ~~~d~vi~~ag~   94 (262)
T PRK13394         83 GSVDILVSNAGI   94 (262)
T ss_pred             CCCCEEEECCcc
Confidence            258999999874

>PRK06128 oxidoreductase; Provisional

Probab=95.40  E-value=0.21  Score=46.09  Aligned_cols=81  Identities=17%  Similarity=0.092  Sum_probs=47.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--H----HHhhhcCCcEE---eCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--K----EKGKAFGMTDF---INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~----~~~~~lg~~~v---~~~~~~~~~~~~~~i~~~~  258 (375)
                      -.|.++||+|+ |++|...++.....|+ +|+.+.++++.  .    +.+++.+....   .|-.+  .+...+.+.+..
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~  129 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAV  129 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHH
Confidence            35789999988 9999988877777899 88877654322  1    22333443221   23222  122222222221


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . -.++|++|++.|.
T Consensus       130 ~~~g~iD~lV~nAg~  144 (300)
T PRK06128        130 KELGGLDILVNIAGK  144 (300)
T ss_pred             HHhCCCCEEEECCcc
Confidence            1 1269999999873

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.13  Score=46.42  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+..    .+.+... +  .|-.+  .+++.+.+.+... -
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~   84 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF   84 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999988888888899 899999887765432    2223221 1  23332  1233333333221 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|.+.|
T Consensus        85 ~~iD~vi~~ag   95 (264)
T PRK07576         85 GPIDVLVSGAA   95 (264)
T ss_pred             CCCCEEEECCC
Confidence            26899998875

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.37  E-value=0.058  Score=46.49  Aligned_cols=100  Identities=16%  Similarity=0.207  Sum_probs=60.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      +.+.....++.+||-+|+| .|..+..+++. |. +|++++.+++-.+.+++    .+.......     .+...  ...
T Consensus        22 l~~~~~~~~~~~vLDiGcG-~G~~a~~la~~-g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~-----~d~~~--~~~   91 (195)
T TIGR00477        22 VREAVKTVAPCKTLDLGCG-QGRNSLYLSLA-GY-DVRAWDHNPASIASVLDMKARENLPLRTDA-----YDINA--AAL   91 (195)
T ss_pred             HHHHhccCCCCcEEEeCCC-CCHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe-----ccchh--ccc
Confidence            3444455567899999986 37777777764 77 99999999877766543    232211100     11110  011


Q ss_pred             cCCCCccEEEEccC----C----hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vid~~g----~----~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       . ..+|+|+.+..    .    ...+..+.++|+++ |.++.+.
T Consensus        92 -~-~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        92 -N-EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             -c-CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence             2 26999976532    1    23677888999998 9865553

Part of a tellurite-reducing operon tehA and tehB

>PLN02476 O-methyltransferase

Probab=95.37  E-value=0.13  Score=46.78  Aligned_cols=105  Identities=15%  Similarity=0.232  Sum_probs=67.5

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...+..+..+||-+|.+ +|..++.+|+.++ -.+|++++.+++..+.++    +.|...-+.-..   .+..+.+.++.
T Consensus       112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l~  187 (278)
T PLN02476        112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSMI  187 (278)
T ss_pred             HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHH
Confidence            45566788999999884 4777778888763 227999999999887774    456542111111   23334444332


Q ss_pred             ---CCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEE
Q 017201          259 ---HGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       259 ---~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~  293 (375)
                         ....||.||--....   ..++.++++++++ |.++.=
T Consensus       188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D  227 (278)
T PLN02476        188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD  227 (278)
T ss_pred             hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence               123799986544432   4678899999997 877643

>PRK00811 spermidine synthase; Provisional

Probab=95.36  E-value=0.099  Score=47.92  Aligned_cols=96  Identities=13%  Similarity=0.089  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC------C--c---EEeCCCCCCcccHHHHHHhh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG------M--T---DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg------~--~---~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ...++||++|+|. |..+..++++.+..+|++++.+++-.+.+++.-      .  +   .++.      .|..+.+.. 
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE-  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence            4567999998864 667777888767669999999998888877531      1  0   1121      233333433 


Q ss_pred             cCCCCccEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      . ...||+||--...          .+.++.+.+.|+++ |.++...
T Consensus       147 ~-~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        147 T-ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             C-CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            2 3379998754321          23467788999998 9888653

>PRK00536 speE spermidine synthase; Provisional

Probab=95.35  E-value=0.069  Score=48.09  Aligned_cols=99  Identities=8%  Similarity=-0.113  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ...++|||+|+|- |.++=+++|+-.  +|+.++.+++=.+.++++-..  ..++...   -.+...+.+... ..||+|
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~-~~fDVI  143 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDI-KKYDLI  143 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccC-CcCCEE
Confidence            4458999998764 556778888753  999999999888888873221  1222222   122222333222 379996


Q ss_pred             -EEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          267 -FECTGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       267 -id~~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                       +|+.-.++..+...++|+++ |.++.-+.
T Consensus       144 IvDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        144 ICLQEPDIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             EEcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence             56566666788899999998 88876543

>PLN03139 formate dehydrogenase; Provisional

Probab=95.35  E-value=0.14  Score=48.88  Aligned_cols=90  Identities=16%  Similarity=0.186  Sum_probs=59.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+..++.|+..+        .++.+.+.      ..|+|+-
T Consensus       197 L~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~------~sDvV~l  261 (386)
T PLN03139        197 LEGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE--------EDLDAMLP------KCDVVVI  261 (386)
T ss_pred             CCCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec--------CCHHHHHh------hCCEEEE
Confidence            367899999999999999999999999 89999877544444444554321        12322221      3677776


Q ss_pred             ccCChhh----H-HHHHHhcccCCeEEEEEc
Q 017201          269 CTGVPSL----L-SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       269 ~~g~~~~----~-~~~~~~l~~~~G~iv~~g  294 (375)
                      +....+.    + ...+..++++ ..++.++
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~g-a~lIN~a  291 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKG-VLIVNNA  291 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence            6653221    1 2456677775 6666665

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.096  Score=47.08  Aligned_cols=78  Identities=17%  Similarity=0.162  Sum_probs=50.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cC-C--cE-EeCCCCCCcccHHHHHHhhcC--CCCc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FG-M--TD-FINPDDEPNKSISELVKGITH--GMGV  263 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg-~--~~-v~~~~~~~~~~~~~~i~~~~~--~~g~  263 (375)
                      +++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++ .  .. ..|-.+  .+++.+.+.....  ..++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            47999998 9999988887778898 89999998887665432 22 1  11 223333  1333333333221  2369


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.34  E-value=0.086  Score=47.51  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... +  .|-.+  .+++.+.+.+... -..+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4679999988 9999988888888899 999999988765543 3444321 1  23333  2333333333211 1258


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.081  Score=46.59  Aligned_cols=75  Identities=20%  Similarity=0.208  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .++++||+|+ |.+|...++.+...|+ +|+++.+++++.     +.... ..|-.+  .+.+.+.+.+.....+.|++|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi   73 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIV   73 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence            3678999988 9999988888888898 899999876551     11111 123332  133333344433333689999


Q ss_pred             EccCC
Q 017201          268 ECTGV  272 (375)
Q Consensus       268 d~~g~  272 (375)
                      .+.|.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            98874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.32  E-value=0.086  Score=47.22  Aligned_cols=80  Identities=19%  Similarity=0.311  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhc-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-HG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~-~~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    +..|... .  .|-.+  .+++.+.+.+.. .-
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            5789999988 9999988887777899 899999887665432    2223222 1  23333  123333333221 11


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|++.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            268999999974

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.32  E-value=0.095  Score=47.66  Aligned_cols=79  Identities=13%  Similarity=0.270  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEEe--CCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFI--NPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v~--~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .++++||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+.+    +++|....+  |-.+  .++..+.+.+....
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~   82 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK   82 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence            5788999998 4  899988877778899 898888765322222    334533222  3332  22333333333221


Q ss_pred             -CCccEEEEccC
Q 017201          261 -MGVDYCFECTG  271 (375)
Q Consensus       261 -~g~d~vid~~g  271 (375)
                       ..+|++|++.|
T Consensus        83 ~g~iD~lVnnAG   94 (271)
T PRK06505         83 WGKLDFVVHAIG   94 (271)
T ss_pred             hCCCCEEEECCc
Confidence             26999999987

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.32  E-value=0.13  Score=45.39  Aligned_cols=79  Identities=11%  Similarity=0.146  Sum_probs=49.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCC-CCccEE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDF-INPDDEPNKSISELVKGITHG-MGVDYC  266 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~-~g~d~v  266 (375)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++. +.+++.++..+ .|-.+  .++..+.+.+.... .++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence            468999988 9999988887778899 899998876543 33344554322 23322  12333333333221 259999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998874

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.31  E-value=0.16  Score=46.00  Aligned_cols=35  Identities=29%  Similarity=0.425  Sum_probs=31.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            66889999999999999999999998899999855

>PRK06849 hypothetical protein; Provisional

Probab=95.30  E-value=0.72  Score=44.32  Aligned_cols=95  Identities=14%  Similarity=0.052  Sum_probs=60.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ...+|||+|+ .+.|+..++.++..|. +|+++++++........ .++.  .+.....+.+.+.+.+.++....++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            3578999998 6789999999999999 99999987654432211 2222  2322221235577778777777789999


Q ss_pred             EEccCChhhHHHHHHhcccC
Q 017201          267 FECTGVPSLLSEALETTKVG  286 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~  286 (375)
                      |-+......+......+.+.
T Consensus        81 IP~~e~~~~~a~~~~~l~~~  100 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAY  100 (389)
T ss_pred             EECChHHHhHHhhhhhhcCC
Confidence            97765332223333445443

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.29  E-value=0.15  Score=45.75  Aligned_cols=80  Identities=20%  Similarity=0.248  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    ..+...   ..|-.+  .+.+.+.+.++.. .
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5789999988 9999988888778899 8999999887765443    223221   123332  1223222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|.+|.+.|.
T Consensus        88 ~~id~vi~~ag~   99 (259)
T PRK08213         88 GHVDILVNNAGA   99 (259)
T ss_pred             CCCCEEEECCCC
Confidence            268999999873

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.094  Score=47.17  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=49.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-CC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      +.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+    +..+...   ..|-.+  .+.+...+.+... -.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFG   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            357999998 9999998888888898 999999887664432    2233321   123222  1223333332211 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|.+.|.
T Consensus        78 ~id~vi~~ag~   88 (263)
T PRK06181         78 GIDILVNNAGI   88 (263)
T ss_pred             CCCEEEECCCc
Confidence            68999999864

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.27  E-value=0.14  Score=46.08  Aligned_cols=77  Identities=17%  Similarity=0.264  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cCCcE-E--eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTD-F--INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg~~~-v--~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .+.++||+|+ +++|...++.+...|+ +|+++++++++.+.+.    + .+... +  .|-.+  .+++.+.+...  +
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEA--G   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHh--C
Confidence            4789999988 9999988887778899 9999999887665432    1 12211 2  22222  12333323222  2


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                       .+|++|++.|.
T Consensus        81 -~id~lv~~ag~   91 (259)
T PRK06125         81 -DIDILVNNAGA   91 (259)
T ss_pred             -CCCEEEECCCC
Confidence             69999999874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.26  E-value=0.098  Score=49.19  Aligned_cols=36  Identities=19%  Similarity=0.366  Sum_probs=31.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .+.+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            457899999999999999999999988899898763

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.25  E-value=0.11  Score=46.83  Aligned_cols=79  Identities=14%  Similarity=0.248  Sum_probs=47.5

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCeEEEEcCChhhHH---H-hhhcCCcEEe--CCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKE---K-GKAFGMTDFI--NPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Gag---~~G~~ai~la~~~G~~~V~~~~~~~~~~~---~-~~~lg~~~v~--~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .|+++||+|++   ++|.+.++.....|+ +|+.++++++..+   . .++++...++  |-.+  .++..+.+.+....
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   85 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE   85 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence            57899999873   899988777777898 8988887754322   2 2233322222  2222  23333333332221


Q ss_pred             -CCccEEEEccC
Q 017201          261 -MGVDYCFECTG  271 (375)
Q Consensus       261 -~g~d~vid~~g  271 (375)
                       ..+|++|++.|
T Consensus        86 ~g~ld~lv~nAg   97 (258)
T PRK07533         86 WGRLDFLLHSIA   97 (258)
T ss_pred             cCCCCEEEEcCc
Confidence             26999999886

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.25  E-value=0.23  Score=44.70  Aligned_cols=98  Identities=19%  Similarity=0.162  Sum_probs=68.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      +.......++++||=+|+|. |..+..+++.. +. +|++++.+++-.+.+++.+.+.+.       .+..    ++...
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~----~~~~~   87 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR----DWKPK   87 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh----hCCCC
Confidence            34556678899999999875 77788888876 55 899999999888888776554322       1221    11222


Q ss_pred             CCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEE
Q 017201          261 MGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       261 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ..||+|+-...     . ...+..+.+.|+|+ |.++..
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            37999987543     2 23577889999998 988765

>PLN02244 tocopherol O-methyltransferase

Probab=95.25  E-value=0.059  Score=50.80  Aligned_cols=95  Identities=20%  Similarity=0.326  Sum_probs=63.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc---EEeCCCCCCcccHHHHHHhhcCCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      +++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++.    +..   .++..+.   .++     ...+ .
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~-~  185 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFED-G  185 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCC-C
Confidence            7889999999874 6677888888888 999999999877766542    321   1111111   000     1122 3


Q ss_pred             CccEEEEccCC------hhhHHHHHHhcccCCeEEEEEcc
Q 017201          262 GVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       262 g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .||+|+-....      ...+.++.+.|+++ |+++....
T Consensus       186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        186 QFDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             CccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            69999864331      23678899999998 99987653

>PRK05717 oxidoreductase; Validated

Probab=95.24  E-value=0.11  Score=46.55  Aligned_cols=81  Identities=19%  Similarity=0.193  Sum_probs=50.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE---EeCCCCCCcccHHHHHHhhcCC-CC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGITHG-MG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~g  262 (375)
                      ..|.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...   ..|-.+  ..+..+.+.+.... ..
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCC
Confidence            35788999988 9999988887777898 899998877655433 3344221   123222  12232223332211 15


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|.+.|.
T Consensus        85 id~li~~ag~   94 (255)
T PRK05717         85 LDALVCNAAI   94 (255)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.082  Score=46.84  Aligned_cols=40  Identities=23%  Similarity=0.279  Sum_probs=33.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  230 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~  230 (375)
                      ++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~   45 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEK   45 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHH
Confidence            4679999988 9999988888888899 89999998876654

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.1  Score=47.06  Aligned_cols=80  Identities=18%  Similarity=0.190  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cC-CcE---EeCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FG-MTD---FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg-~~~---v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.    + .+ ...   ..|-.+  .+...+.+.+...
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            4789999998 9999988888888899 8999999887765432    1 11 111   123333  1233333333221


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -..+|++|++.|.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence             1259999999873

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.12  Score=45.55  Aligned_cols=79  Identities=16%  Similarity=0.086  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC--
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH--  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~--  259 (375)
                      .|.++||+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+    ++.+.+.   ..|-.+  .++..+.+.+...  
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF   80 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4789999988 8999987777777899 899999888776543    2334322   123222  2333333333222  


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      +..+|++|++.|
T Consensus        81 g~~iD~li~nag   92 (227)
T PRK08862         81 NRAPDVLVNNWT   92 (227)
T ss_pred             CCCCCEEEECCc
Confidence            126999999986

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.12  Score=46.00  Aligned_cols=75  Identities=11%  Similarity=0.085  Sum_probs=47.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC--CcE-EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG--MTD-FINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg--~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+  ... ..|-.+  .+++.+.+.+.. . ..|.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~-~-~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQLP-F-IPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhcc-c-CCCEEE
Confidence            57899988 9999977766667899 8999999988876654432  211 123333  233333333332 2 467776


Q ss_pred             EccC
Q 017201          268 ECTG  271 (375)
Q Consensus       268 d~~g  271 (375)
                      .+.|
T Consensus        77 ~~ag   80 (240)
T PRK06101         77 FNAG   80 (240)
T ss_pred             EcCc
Confidence            6664

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.11  Score=46.18  Aligned_cols=80  Identities=21%  Similarity=0.258  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc--E-EeCCCCCCcccHHHHHHhhc-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT--D-FINPDDEPNKSISELVKGIT-HG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~--~-v~~~~~~~~~~~~~~i~~~~-~~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.    +.+..  . ..|-.+  .+.+...+.+.. ..
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF   81 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            4678999998 9999988887777898 8999998876553332    12221  1 223332  122222222211 11


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        82 ~~id~vi~~ag~   93 (250)
T PRK07774         82 GGIDYLVNNAAI   93 (250)
T ss_pred             CCCCEEEECCCC
Confidence            259999999873

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.18  E-value=0.15  Score=46.92  Aligned_cols=37  Identities=22%  Similarity=0.310  Sum_probs=31.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ..+.+++|+|+|++|.+++..+...|+++|++++++.
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            3578999999999999888888888996799999886

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.17  E-value=0.13  Score=46.74  Aligned_cols=92  Identities=18%  Similarity=0.165  Sum_probs=57.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhc---CCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---g~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ...+.+++|+|+|++|.+.+..+...|+ +|+++++++++.+.+ +.+   +........        +    ... ..+
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--------~----~~~-~~~  179 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD--------E----LPL-HRV  179 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh--------h----hcc-cCc
Confidence            3567899999999999988877777898 999999988776543 332   221121110        0    111 258


Q ss_pred             cEEEEccCCh--hhH---HHHHHhcccCCeEEEEEc
Q 017201          264 DYCFECTGVP--SLL---SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       264 d~vid~~g~~--~~~---~~~~~~l~~~~G~iv~~g  294 (375)
                      |+||++++..  +..   ......++++ ..++.+.
T Consensus       180 DivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~  214 (270)
T TIGR00507       180 DLIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMV  214 (270)
T ss_pred             cEEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEec
Confidence            9999999753  111   1123456665 6666664

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06194 hypothetical protein; Provisional

Probab=95.17  E-value=0.077  Score=48.49  Aligned_cols=80  Identities=18%  Similarity=0.186  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h---cCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMTD-FI--NPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+. +   .+... ++  |-.+  .+++.+.+..... .
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~   81 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF   81 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            3678999988 9999988887778898 8999998876654332 2   23322 12  2222  1233332222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        82 g~id~vi~~Ag~   93 (287)
T PRK06194         82 GAVHLLFNNAGV   93 (287)
T ss_pred             CCCCEEEECCCC
Confidence            258999999974

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.17  E-value=0.095  Score=46.76  Aligned_cols=35  Identities=29%  Similarity=0.415  Sum_probs=30.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus        23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            34789999999999999999999999899998865

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06398 aldose dehydrogenase; Validated

Probab=95.15  E-value=0.03  Score=50.48  Aligned_cols=75  Identities=13%  Similarity=0.184  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      .|.++||+|+ +++|...++.+...|+ +|+.+++++++..     .... ..|-.+  ..++.+.+.+... ...+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 9999998888888899 8999987765432     1111 123322  1233333333221 1259999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998873

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=95.14  E-value=0.76  Score=41.17  Aligned_cols=99  Identities=17%  Similarity=0.219  Sum_probs=64.1

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      +.....++++||-+|+|. |..+..+++ .|. +|++++.+++..+.+++... ..++..+      ... + .. ....
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d------~~~-~-~~-~~~~  103 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGD------IES-L-PL-ATAT  103 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcC------ccc-C-cC-CCCc
Confidence            334445678999999975 666666655 476 99999999998888876432 1222111      111 0 11 2236


Q ss_pred             ccEEEEccCC------hhhHHHHHHhcccCCeEEEEEcc
Q 017201          263 VDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       263 ~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ||+|+....-      ...+..+.+.|+++ |.++....
T Consensus       104 fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~  141 (251)
T PRK10258        104 FDLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL  141 (251)
T ss_pred             EEEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            9999865431      23578899999998 98887643

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.14  E-value=0.1  Score=42.06  Aligned_cols=34  Identities=26%  Similarity=0.430  Sum_probs=28.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ..+|+|+|+|++|...+..+...|..+++.++.+
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence            4689999999999988888888899899999854

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.11  E-value=0.2  Score=46.57  Aligned_cols=90  Identities=13%  Similarity=0.225  Sum_probs=59.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++..     +...+...     .++.+.+.      +.|+|+.
T Consensus       134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~-----~~l~e~l~------~aDvvv~  196 (312)
T PRK15469        134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR-----EELSAFLS------QTRVLIN  196 (312)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc-----ccHHHHHh------cCCEEEE
Confidence            367899999999999999999999999 9999987654321     22222111     12332222      4788888


Q ss_pred             ccCChhh----H-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPSL----L-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~~----~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +....+.    + ...+..++++ ..++.+|..
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~g-a~lIN~aRG  228 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDG-AYLLNLARG  228 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCC-cEEEECCCc
Confidence            7764322    2 2467778886 877777633

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.11  E-value=0.14  Score=43.48  Aligned_cols=92  Identities=22%  Similarity=0.269  Sum_probs=58.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ++++||=+|+|. |..++.+++.....+|++++.+++..++++    +.+.+.  ++..      +..+ +   .....+
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~------d~~~-~---~~~~~f  110 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG------RAED-F---QHEEQF  110 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec------chhh-c---cccCCc
Confidence            488999999863 666667676654348999999988666553    344432  2222      2211 1   223379


Q ss_pred             cEEEEccC--ChhhHHHHHHhcccCCeEEEEE
Q 017201          264 DYCFECTG--VPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       264 d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      |+|+-..-  -+..++.+.+.|+++ |+++..
T Consensus       111 D~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       111 DVITSRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             cEEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            99876531  123566788899998 988866

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.09  E-value=0.18  Score=46.08  Aligned_cols=82  Identities=17%  Similarity=0.322  Sum_probs=54.9

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcCCCeEEEEc-CChhh--HHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGLG-AVDGARMHGAAKIIGID-KNPWK--KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~~-ai~la~~~G~~~V~~~~-~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|.. +..+.+.-+. ++.++. .++++  +++++++|.....+       ++...+.    ..++|+|++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~----~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA----NPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc----CCCCCEEEE
Confidence            6889999999985 4566655566 666554 45544  45677788654432       2222221    237999999


Q ss_pred             ccCChhhHHHHHHhcccC
Q 017201          269 CTGVPSLLSEALETTKVG  286 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~  286 (375)
                      +++...+.+.+..++..+
T Consensus        71 aTp~~~H~e~a~~al~aG   88 (285)
T TIGR03215        71 ATSAKAHARHARLLAELG   88 (285)
T ss_pred             CCCcHHHHHHHHHHHHcC
Confidence            999887777888887774

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK09186 flagellin modification protein A; Provisional

Probab=95.08  E-value=0.15  Score=45.54  Aligned_cols=79  Identities=18%  Similarity=0.241  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhc----CCc---E-EeCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMT---D-FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----g~~---~-v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .+.+|||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ .++    +..   . ..|-.+  .+.+.+.+.+...
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999988888888899 899999887776443 222    221   1 223333  2233333333221


Q ss_pred             -CCCccEEEEccC
Q 017201          260 -GMGVDYCFECTG  271 (375)
Q Consensus       260 -~~g~d~vid~~g  271 (375)
                       -.++|++|++.+
T Consensus        80 ~~~~id~vi~~A~   92 (256)
T PRK09186         80 KYGKIDGAVNCAY   92 (256)
T ss_pred             HcCCccEEEECCc
Confidence             125899999885

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.086  Score=47.29  Aligned_cols=80  Identities=16%  Similarity=0.116  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh---cCCcE---EeCCCCCCcccHHHHHHhhcCC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD---FINPDDEPNKSISELVKGITHG-M  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~  261 (375)
                      +|.++||+|+ |.+|...++.+...|+ +|+.+++++++.+..++   .+...   ..|-.+  .+.+...+.+.... .
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence            4679999998 9999987777777898 88888888776544333   23221   122222  12233333332221 2


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (258)
T PRK08628         83 RIDGLVNNAGV   93 (258)
T ss_pred             CCCEEEECCcc
Confidence            68999999983

>PRK04266 fibrillarin; Provisional

Probab=95.07  E-value=0.35  Score=42.74  Aligned_cols=102  Identities=18%  Similarity=0.161  Sum_probs=62.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      +..++++|++||=+|+|+ |..+..+++..+..+|++++.+++.++.+.    +......+..+.   .+.. ....+ .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~~-~~~~l-~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKPE-RYAHV-V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCcc-hhhhc-c
Confidence            457899999999998863 555666777665338999999997666442    221112221111   1110 00111 1


Q ss_pred             CCCccEEEEccCChh----hHHHHHHhcccCCeEEEEE
Q 017201          260 GMGVDYCFECTGVPS----LLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       260 ~~g~d~vid~~g~~~----~~~~~~~~l~~~~G~iv~~  293 (375)
                      . .+|+|+.....+.    .++.+.+.|+++ |+++..
T Consensus       140 ~-~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        140 E-KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             c-cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            2 5999986544331    367888999998 998874

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.27  Score=42.88  Aligned_cols=74  Identities=12%  Similarity=0.112  Sum_probs=44.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEe--CCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFI--NPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~--~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .++||+|+ |.+|...+..+... + +|+++++++++.+.+.+ +....++  |-.+  .+.+.+.+...   .++|.+|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~---~~id~vi   76 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD--PEAIAAAVEQL---GRLDVLV   76 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC--HHHHHHHHHhc---CCCCEEE
Confidence            57999988 99999766655555 6 89999998877654442 2111222  2222  12222222221   2699999


Q ss_pred             EccCC
Q 017201          268 ECTGV  272 (375)
Q Consensus       268 d~~g~  272 (375)
                      .+.|.
T Consensus        77 ~~ag~   81 (227)
T PRK08219         77 HNAGV   81 (227)
T ss_pred             ECCCc
Confidence            99874

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.05  E-value=0.23  Score=46.27  Aligned_cols=106  Identities=15%  Similarity=0.074  Sum_probs=65.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHhh-hc---CCcEEeCCCCCCcccHHHHHHhhcCC
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGK-AF---GMTDFINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~~-~l---g~~~v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .......+|+|+|+|.+|...++... ..+..+|.+.++++++.+.+. .+   +..... .     .+..+.+      
T Consensus       120 La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~-----~~~~~av------  187 (314)
T PRK06141        120 LARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V-----TDLEAAV------  187 (314)
T ss_pred             hCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e-----CCHHHHH------
Confidence            33456789999999999998775444 467669999999988866543 33   322111 1     1222222      


Q ss_pred             CCccEEEEccCChhh-HHHHHHhcccCCeEEEEEccCCCccccchHH
Q 017201          261 MGVDYCFECTGVPSL-LSEALETTKVGKGKVIVIGVGVDAMVPLNVI  306 (375)
Q Consensus       261 ~g~d~vid~~g~~~~-~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~  306 (375)
                      .+.|+|+.++++... +..  ..++++ -.+..+|........++..
T Consensus       188 ~~aDIVi~aT~s~~pvl~~--~~l~~g-~~i~~ig~~~~~~~El~~~  231 (314)
T PRK06141        188 RQADIISCATLSTEPLVRG--EWLKPG-THLDLVGNFTPDMRECDDE  231 (314)
T ss_pred             hcCCEEEEeeCCCCCEecH--HHcCCC-CEEEeeCCCCcccccCCHH
Confidence            268999988876522 222  567886 6666677554334445543

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.05  E-value=0.16  Score=41.30  Aligned_cols=32  Identities=31%  Similarity=0.378  Sum_probs=28.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      +|+|+|+|++|...++.+.+.|..+++.++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48999999999998898889998889999855

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.03  E-value=0.22  Score=46.79  Aligned_cols=87  Identities=17%  Similarity=0.347  Sum_probs=56.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++++.. .....+...         .++.+.+.      ..|+|+-+
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~---------~~l~ell~------~aDiV~l~  211 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY---------RPLEELLR------ESDFVSLH  211 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe---------cCHHHHHh------hCCEEEEe
Confidence            67899999999999999999999999 999998775443 223344321         12222221      36777766


Q ss_pred             cCChh----hH-HHHHHhcccCCeEEEEEc
Q 017201          270 TGVPS----LL-SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       270 ~g~~~----~~-~~~~~~l~~~~G~iv~~g  294 (375)
                      ....+    .+ ...+..++++ ..++.++
T Consensus       212 lP~t~~T~~~i~~~~~~~mk~g-a~lIN~a  240 (333)
T PRK13243        212 VPLTKETYHMINEERLKLMKPT-AILVNTA  240 (333)
T ss_pred             CCCChHHhhccCHHHHhcCCCC-eEEEECc
Confidence            65322    11 2456666765 6666665

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.03  E-value=0.62  Score=36.05  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=59.7

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP  273 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~  273 (375)
                      |+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|...+. .+. .+.+   .+++. +-..++.++-+.+++
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd~-~~~~---~l~~a-~i~~a~~vv~~~~~d   73 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GDA-TDPE---VLERA-GIEKADAVVILTDDD   73 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-T-TSHH---HHHHT-TGGCESEEEEESSSH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-ccc-hhhh---HHhhc-CccccCEEEEccCCH
Confidence            6788999999999998888665 899999999999999888865443 222 1122   23332 223788888888776


Q ss_pred             hhH---HHHHHhcccCCeEEEEE
Q 017201          274 SLL---SEALETTKVGKGKVIVI  293 (375)
Q Consensus       274 ~~~---~~~~~~l~~~~G~iv~~  293 (375)
                      ..-   -...+.+.+. .+++..
T Consensus        74 ~~n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   74 EENLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHHHCCC-CeEEEE
Confidence            321   2233444554 555544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.03  E-value=0.19  Score=44.48  Aligned_cols=35  Identities=29%  Similarity=0.384  Sum_probs=30.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|...+..+...|..+++.++.+
T Consensus        20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            35799999999999998888889999899888744

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.02  E-value=0.27  Score=36.70  Aligned_cols=85  Identities=22%  Similarity=0.325  Sum_probs=53.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC---CCeEEEE-cCChhhHHHh-hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          193 SVAVLGLGTVGLGAVDGARMHG---AAKIIGI-DKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G---~~~V~~~-~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      +|.|+|+|.+|.+.++-....|   . +|+.+ ++++++.+.+ ++++.....       .+..+.++      ..|+||
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~------~advvi   66 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ------EADVVI   66 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH------HTSEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc------cCCEEE
Confidence            5788899999998777777777   6 78844 9999988776 456644322       12333333      479999


Q ss_pred             EccCChhhHHHHHH---hcccCCeEEEEE
Q 017201          268 ECTGVPSLLSEALE---TTKVGKGKVIVI  293 (375)
Q Consensus       268 d~~g~~~~~~~~~~---~l~~~~G~iv~~  293 (375)
                      -|+-.. .+...+.   .+.++ ..++.+
T Consensus        67 lav~p~-~~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   67 LAVKPQ-QLPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             E-S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred             EEECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence            999765 3343333   34454 555544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.01  E-value=0.17  Score=44.79  Aligned_cols=80  Identities=11%  Similarity=0.067  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+.+.+.+..... .
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4578999988 9999998888888898 9999999887654432    222221 1  23222  1233333332221 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|.+.|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            259999999874

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.01  E-value=0.17  Score=50.16  Aligned_cols=71  Identities=25%  Similarity=0.276  Sum_probs=50.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-----KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~-----~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      -.+.+|+|+|+|.+|+.++.+++..|+ +|++++.++.     ..+.+++.|.........   .          ...++
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~----------~~~~~   79 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T----------LPEDT   79 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c----------ccCCC
Confidence            356799999999999999999999999 8999885542     224456678765544322   1          01258


Q ss_pred             cEEEEccCCh
Q 017201          264 DYCFECTGVP  273 (375)
Q Consensus       264 d~vid~~g~~  273 (375)
                      |+||-+.|-+
T Consensus        80 D~Vv~s~Gi~   89 (480)
T PRK01438         80 DLVVTSPGWR   89 (480)
T ss_pred             CEEEECCCcC
Confidence            8998888754

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.00  E-value=0.1  Score=45.18  Aligned_cols=35  Identities=29%  Similarity=0.421  Sum_probs=30.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|...++.+.+.|..+++.++.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45789999999999988888888898789999877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.00  E-value=0.13  Score=45.88  Aligned_cols=80  Identities=21%  Similarity=0.310  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  ..++.+.+.+... .
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   82 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            4789999998 9999987777777898 899999987765432    2333321 1  22222  1222222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|.+.|.
T Consensus        83 g~id~li~~ag~   94 (253)
T PRK06172         83 GRLDYAFNNAGI   94 (253)
T ss_pred             CCCCEEEECCCC
Confidence            268999998874

>PRK08643 acetoin reductase; Validated

Probab=95.00  E-value=0.15  Score=45.56  Aligned_cols=79  Identities=15%  Similarity=0.147  Sum_probs=49.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      ++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.    +.+... .  .|-.+  .+.+.+.+.+... ..
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            568999988 9999988888888899 8999998877654432    223221 1  23322  1223332332211 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|.+.|.
T Consensus        79 ~id~vi~~ag~   89 (256)
T PRK08643         79 DLNVVVNNAGV   89 (256)
T ss_pred             CCCEEEECCCC
Confidence            69999999864

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.97  E-value=0.21  Score=45.60  Aligned_cols=78  Identities=21%  Similarity=0.218  Sum_probs=56.9

Q ss_pred             CCCCCEEEEECCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          188 VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       188 ~~~g~~VlI~Gag~-~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .-.|.+|+|+|.|. +|...+.++...|+ +|+++.+..                      .++.+.+      +++|++
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~------~~aDIv  206 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV------KQADII  206 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh------ccCCEE
Confidence            46889999999976 99999999999999 888886521                      1222222      268999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      |.++|.+..+.  .+.++++ ..++.+|...
T Consensus       207 I~AtG~~~~v~--~~~lk~g-avViDvg~n~  234 (283)
T PRK14192        207 VGAVGKPELIK--KDWIKQG-AVVVDAGFHP  234 (283)
T ss_pred             EEccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence            99998775433  3557886 8888887553

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.97  E-value=0.14  Score=45.92  Aligned_cols=35  Identities=29%  Similarity=0.404  Sum_probs=30.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45799999999999999999999999899988754

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.15  Score=46.53  Aligned_cols=80  Identities=18%  Similarity=0.195  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+... .  .|-.+  .+++.+.+.+... -
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   81 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL   81 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            4788999988 9999988888788899 899998887665533    2234322 1  23222  1223222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|++.|.
T Consensus        82 g~id~li~nAg~   93 (275)
T PRK05876         82 GHVDVVFSNAGI   93 (275)
T ss_pred             CCCCEEEECCCc
Confidence            258999999873

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.95  E-value=0.16  Score=45.67  Aligned_cols=77  Identities=21%  Similarity=0.211  Sum_probs=48.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE--eCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF--INPDDEPNKSISELVKGITH-GMGVD  264 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v--~~~~~~~~~~~~~~i~~~~~-~~g~d  264 (375)
                      ++||+|+ +++|...++.....|+ +|+.+++++++.+.+.    +.+....  .|-.+  .++..+.+.+... -.++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCCC
Confidence            6899988 9999987777777899 8999998877654332    2232122  23222  1233333333221 12699


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      ++|++.|.
T Consensus        79 ~li~naG~   86 (259)
T PRK08340         79 ALVWNAGN   86 (259)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK01581 speE spermidine synthase; Validated

Probab=94.94  E-value=0.37  Score=45.42  Aligned_cols=103  Identities=12%  Similarity=0.019  Sum_probs=64.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-c----EEeCCCCC--CcccHHHHHHhhcCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-T----DFINPDDE--PNKSISELVKGITHG  260 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~----~v~~~~~~--~~~~~~~~i~~~~~~  260 (375)
                      .....+|||+|+| .|.++..++++.+..+|++++.+++-.+.++++.. .    ..++....  ...|..+.+.+ .. 
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~-  224 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PS-  224 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cC-
Confidence            3445799999976 46677777877666699999999998888885210 0    00000000  01233344443 22 


Q ss_pred             CCccEEEEccCC-----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          261 MGVDYCFECTGV-----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       261 ~g~d~vid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ..||+||--...           .+.+..+.+.|+++ |.++.-.
T Consensus       225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs  268 (374)
T PRK01581        225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS  268 (374)
T ss_pred             CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            369998654322           23577889999998 9887764

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.92  E-value=0.31  Score=42.60  Aligned_cols=102  Identities=17%  Similarity=0.182  Sum_probs=62.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEe---------CCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFI---------NPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~---------~~~~~~~~~~~~~i~~~  257 (375)
                      ..++.+||+.|+|. |.-|+.||. .|. +|++++.++.-.+.+. +.+.....         ...+  ..-....+.++
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~D~~~~  106 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGN--IEIFCGDFFAL  106 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCc--eEEEEccCCCC
Confidence            36788999999974 777888875 698 9999999998777642 22221000         0000  00000011111


Q ss_pred             c--CCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEEcc
Q 017201          258 T--HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       258 ~--~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .  ....||.|+|...-        ...++...++|+|+ |.++.+..
T Consensus       107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence            1  11258999997641        23577899999998 98666654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.91  E-value=0.5  Score=44.08  Aligned_cols=91  Identities=23%  Similarity=0.351  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|+++.|+|.|.+|.+.++.++.+|+ +|+..++++. .+..+.+++.++         ++.+.+.      ..|++.-
T Consensus       144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~---------~l~ell~------~sDii~l  206 (324)
T COG1052         144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV---------DLDELLA------ESDIISL  206 (324)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec---------cHHHHHH------hCCEEEE
Confidence            458999999999999999999999999 9999998775 333444555442         1222222      4788755


Q ss_pred             cc-CChhh----HHHHHHhcccCCeEEEEEccCC
Q 017201          269 CT-GVPSL----LSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       269 ~~-g~~~~----~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .. .++++    -...+..++++ +.++.++-..
T Consensus       207 ~~Plt~~T~hLin~~~l~~mk~g-a~lVNtaRG~  239 (324)
T COG1052         207 HCPLTPETRHLINAEELAKMKPG-AILVNTARGG  239 (324)
T ss_pred             eCCCChHHhhhcCHHHHHhCCCC-eEEEECCCcc
Confidence            54 44432    23578889997 8888887443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.91  E-value=0.13  Score=45.87  Aligned_cols=77  Identities=17%  Similarity=0.207  Sum_probs=49.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcE---EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD---FINPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      +++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ ++...   ..|-.+  .+.+.+.+.+... ..++|.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            6899998 9999998888888899 89999999887765433 33321   123322  1223333332221 1269999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |.+.|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            998863

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.13  Score=45.72  Aligned_cols=80  Identities=18%  Similarity=0.184  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc--CCc-EEe--CCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF--GMT-DFI--NPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l--g~~-~v~--~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+.++.++.+... .+  +.. .++  |-.+  .+...+.+.+... -.
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG   80 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence            4679999988 9999987777667798 8999998876654332 22  221 122  3222  1222222222211 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|.+.|.
T Consensus        81 ~id~vi~~ag~   91 (252)
T PRK06138         81 RLDVLVNNAGF   91 (252)
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.90  E-value=0.12  Score=46.34  Aligned_cols=79  Identities=19%  Similarity=0.222  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh---hcCCcE---EeCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK---AFGMTD---FINPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~---~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++...+..+   ..+.+.   ..|-.+  .++..+.+.+... -.
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence            4688999988 9999988888878898 8999988754333332   233322   123332  1233333333221 12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      ++|++|++.|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            6999999986

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.90  E-value=0.21  Score=45.28  Aligned_cols=104  Identities=16%  Similarity=0.183  Sum_probs=68.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEE-eCCCCCCcccHHHHHHhhc
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDF-INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v-~~~~~~~~~~~~~~i~~~~  258 (375)
                      +....++.++.+||=+|+|. |..+..+++..++ +|++++.+++-.+.+++...  ..+ +...     ++..  ..+ 
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-----D~~~--~~~-  113 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN-----DILK--KDF-  113 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC-----Cccc--CCC-
Confidence            45667889999999999863 6567777777787 99999999888777765321  111 1111     1110  011 


Q ss_pred             CCCCccEEEEcc-----C---ChhhHHHHHHhcccCCeEEEEEccC
Q 017201          259 HGMGVDYCFECT-----G---VPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       259 ~~~g~d~vid~~-----g---~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ....||+|+..-     +   ....+..+.+.|+|+ |+++.....
T Consensus       114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~  158 (263)
T PTZ00098        114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC  158 (263)
T ss_pred             CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            223699998521     1   123677889999998 999877543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.90  E-value=0.14  Score=45.92  Aligned_cols=79  Identities=16%  Similarity=0.244  Sum_probs=47.6

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--E--eCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--F--INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Gag---~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      .|+++||+|++   ++|.+.++.+...|+ +|+.+.++++..+.++++....  .  .|-.+  .++..+.+.+... -.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG   82 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence            57899999874   899987777777899 8999887744333344432211  1  22222  1233333333221 12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      .+|++|++.|
T Consensus        83 ~iD~lv~nAg   92 (252)
T PRK06079         83 KIDGIVHAIA   92 (252)
T ss_pred             CCCEEEEccc
Confidence            6999999887

>PRK07890 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.13  Score=45.97  Aligned_cols=80  Identities=20%  Similarity=0.138  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE---EeCCCCCCcccHHHHHHhhcCC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD---FINPDDEPNKSISELVKGITHG-  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~~i~~~~~~-  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+    .+...   ..|-.+  .+.+...+.+.... 
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF   80 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence            5689999988 9999988888888899 89999988876544321    23211   223322  12333333322111 


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|.+.|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            258999998864

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.89  E-value=0.17  Score=46.03  Aligned_cols=80  Identities=20%  Similarity=0.207  Sum_probs=58.1

Q ss_pred             CCCCEEEEECC-CHHHH-HHHHHHHHcCCCeEEEEcCChhhHHHhh-----hcCCc---EEeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGL-GTVGL-GAVDGARMHGAAKIIGIDKNPWKKEKGK-----AFGMT---DFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~-~ai~la~~~G~~~V~~~~~~~~~~~~~~-----~lg~~---~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +-|++.+|.|+ .++|- .|-+||+ .|. +|+.++|+++|++..+     +.++.   .++|..+ +++ .-+.+++..
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~-~~~-~ye~i~~~l  122 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK-GDE-VYEKLLEKL  122 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC-Cch-hHHHHHHHh
Confidence            56788999998 89997 5888888 899 8999999999997654     44532   2455554 112 345666666


Q ss_pred             CCCCccEEEEccCC
Q 017201          259 HGMGVDYCFECTGV  272 (375)
Q Consensus       259 ~~~g~d~vid~~g~  272 (375)
                      .+..+-+.++++|-
T Consensus       123 ~~~~VgILVNNvG~  136 (312)
T KOG1014|consen  123 AGLDVGILVNNVGM  136 (312)
T ss_pred             cCCceEEEEecccc
Confidence            66577888999984

>PLN00203 glutamyl-tRNA reductase

Probab=94.88  E-value=0.16  Score=50.60  Aligned_cols=98  Identities=17%  Similarity=0.197  Sum_probs=62.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC-CcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG-MTD-FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .+.+|+|+|+|.+|.++++.+...|+.+|+++.++.++.+.+. .++ ... +...     .+..+.+    .  +.|+|
T Consensus       265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl~~al----~--~aDVV  333 (519)
T PLN00203        265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEMLACA----A--EADVV  333 (519)
T ss_pred             CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhHHHHH----h--cCCEE
Confidence            3789999999999999999998899878999999988876654 453 221 1111     1222222    1  68999


Q ss_pred             EEccCChhh--HHHHHHhccc----CC--eEEEEEccCCC
Q 017201          267 FECTGVPSL--LSEALETTKV----GK--GKVIVIGVGVD  298 (375)
Q Consensus       267 id~~g~~~~--~~~~~~~l~~----~~--G~iv~~g~~~~  298 (375)
                      |.+++.+..  ....++.+.+    .+  -.++.++.+.+
T Consensus       334 IsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRd  373 (519)
T PLN00203        334 FTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRN  373 (519)
T ss_pred             EEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCC
Confidence            999876532  2233333321    10  15777777753

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.87  E-value=0.25  Score=44.17  Aligned_cols=103  Identities=17%  Similarity=0.188  Sum_probs=67.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ...+.....+||-+|.+ +|..++.+|+.+  +. +|+.++.++++.+.++    +.|...-+....   .+..+.+.++
T Consensus        73 ~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l  147 (247)
T PLN02589         73 MLLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQM  147 (247)
T ss_pred             HHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHH
Confidence            34456677899999874 588888888876  44 8999999998887764    345422221111   2344445444


Q ss_pred             cC----CCCccEEEEccCCh---hhHHHHHHhcccCCeEEEE
Q 017201          258 TH----GMGVDYCFECTGVP---SLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       258 ~~----~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~  292 (375)
                      ..    ...||+||--....   ..++.++++++++ |.++.
T Consensus       148 ~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~  188 (247)
T PLN02589        148 IEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY  188 (247)
T ss_pred             HhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence            32    13799986544332   4577889999997 77653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.86  E-value=0.15  Score=45.98  Aligned_cols=79  Identities=18%  Similarity=0.263  Sum_probs=46.8

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE--eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .|+++||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+.+    ++++...+  .|-.+  .++..+.+.+....
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence            5788999988 4  799987777777899 888887764222222    22343222  23333  23333333333221


Q ss_pred             -CCccEEEEccC
Q 017201          261 -MGVDYCFECTG  271 (375)
Q Consensus       261 -~g~d~vid~~g  271 (375)
                       ..+|++|++.|
T Consensus        84 ~g~iDilVnnag   95 (260)
T PRK06603         84 WGSFDFLLHGMA   95 (260)
T ss_pred             cCCccEEEEccc
Confidence             26999999886

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.86  E-value=0.62  Score=39.68  Aligned_cols=98  Identities=17%  Similarity=0.274  Sum_probs=64.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG  256 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~  256 (375)
                      .....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...  ++.. +     ...   .
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-d-----~~~---~   93 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-E-----API---E   93 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-C-----chh---h
Confidence            3455678899999998864 7777777776643499999999987776643    33322  2221 1     111   1


Q ss_pred             hcCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEE
Q 017201          257 ITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      + . ..+|+|+.....   ...+..+.+.|+++ |+++..
T Consensus        94 ~-~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~  130 (187)
T PRK08287         94 L-P-GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT  130 (187)
T ss_pred             c-C-cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence            1 1 269999864321   23567889999997 988764

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.12  Score=46.15  Aligned_cols=79  Identities=16%  Similarity=0.096  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    +.+... .  .|..+  ..+..+.+.+... -
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   83 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH   83 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999988 9999998888888899 9999998876654332    223221 1  23322  1223322332221 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      ..+|+++++.+
T Consensus        84 ~~id~li~~ag   94 (252)
T PRK07035         84 GRLDILVNNAA   94 (252)
T ss_pred             CCCCEEEECCC
Confidence            25899999887

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.85  E-value=0.23  Score=43.90  Aligned_cols=73  Identities=19%  Similarity=0.265  Sum_probs=53.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh--cCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA--FGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~--lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .++|+|+|.+|...++.+...|. .|++++.++++.+...+  +....+. +..+   .+   .++++ +=..+|+++-+
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~---~~---~L~~a-gi~~aD~vva~   73 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGDATD---ED---VLEEA-GIDDADAVVAA   73 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEecCCC---HH---HHHhc-CCCcCCEEEEe
Confidence            68899999999999999999998 99999999999777333  5554332 2222   22   33333 33379999999


Q ss_pred             cCCh
Q 017201          270 TGVP  273 (375)
Q Consensus       270 ~g~~  273 (375)
                      ++++
T Consensus        74 t~~d   77 (225)
T COG0569          74 TGND   77 (225)
T ss_pred             eCCC
Confidence            9886

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.16  Score=45.99  Aligned_cols=39  Identities=26%  Similarity=0.370  Sum_probs=33.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE  229 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~  229 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~   45 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLA   45 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHH
Confidence            4689999998 9999999998888999 8999998876643

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.85  E-value=0.16  Score=47.77  Aligned_cols=35  Identities=20%  Similarity=0.425  Sum_probs=31.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999999999998888888899899999975

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.84  E-value=0.14  Score=47.77  Aligned_cols=79  Identities=23%  Similarity=0.254  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC---Cc-EE--eCCCCCCcccHHHHHHhhc-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MT-DF--INPDDEPNKSISELVKGIT-HG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---~~-~v--~~~~~~~~~~~~~~i~~~~-~~  260 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+ +++.   .. .+  .|-.+  .+.+.+.+.+.. ..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            4678999988 9999988887777898 899999888776543 2231   11 11  23322  122222233321 12


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      ..+|++|++.|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            25999999987

>PRK12367 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.18  Score=45.09  Aligned_cols=73  Identities=18%  Similarity=0.329  Sum_probs=45.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHhhhcCCcEE--eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lg~~~v--~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++ ++.+.... +....  .|-.+     .. .+.+.. + ++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~-----~~-~~~~~~-~-~iDi   82 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK-----EE-SLDKQL-A-SLDV   82 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC-----HH-HHHHhc-C-CCCE
Confidence            3689999998 9999998888888898 899988776 22221111 11111  23222     11 222222 2 5999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        83 lVnnAG~   89 (245)
T PRK12367         83 LILNHGI   89 (245)
T ss_pred             EEECCcc
Confidence            9999874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.82  E-value=0.12  Score=42.77  Aligned_cols=80  Identities=21%  Similarity=0.244  Sum_probs=46.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHh----hhcCCcE-Ee--CCCCCCcccHHHHHHhhc-CC
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN--PWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGIT-HG  260 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~--~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~~i~~~~-~~  260 (375)
                      +++||+|+ +++|...++.....|..+|+.+.++  .++.+.+    +..+... ++  |-.+  .++..+.+.+.. ..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD--PESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS--HHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc--ccccccccccccccc
Confidence            37899988 9999975555555566588888888  3443322    3344322 22  2222  233333443333 22


Q ss_pred             CCccEEEEccCCh
Q 017201          261 MGVDYCFECTGVP  273 (375)
Q Consensus       261 ~g~d~vid~~g~~  273 (375)
                      ..+|++|.+.|..
T Consensus        79 ~~ld~li~~ag~~   91 (167)
T PF00106_consen   79 GPLDILINNAGIF   91 (167)
T ss_dssp             SSESEEEEECSCT
T ss_pred             ccccccccccccc
Confidence            3699999998753

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.82  E-value=0.17  Score=43.84  Aligned_cols=97  Identities=19%  Similarity=0.199  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .+..  .++.      .+..+.+........+
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~  112 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL  112 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence            678899999974 7777888887654489999999988887753    2322  1222      1232233322223369


Q ss_pred             cEEEEccC--------------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          264 DYCFECTG--------------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       264 d~vid~~g--------------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      |.|+-...              ....++.+.+.|+++ |.++...
T Consensus       113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            99875432              134688899999998 9888663

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.81  E-value=0.22  Score=44.62  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcE---EeCCCCCCcccHHHHHHhhcC-CCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD---FINPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++...  .+.+++.+...   ..|-.+  .++..+.+.+... -.+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence            5789999988 9999998888888999 88888765422  22333444322   123333  2333333333221 125


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+++++.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            9999999873

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.80  E-value=0.18  Score=45.08  Aligned_cols=80  Identities=18%  Similarity=0.200  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      +|.+++|+|+ |.+|...++.....|+ +|+.+++++++.+.+    ++.+... .  .|-.+  .+++...+.+... -
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            5889999988 9999988877777899 899999987665432    2333211 1  23332  1233333333221 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|.+|.+.|.
T Consensus        87 ~~id~vi~~ag~   98 (256)
T PRK06124         87 GRLDILVNNVGA   98 (256)
T ss_pred             CCCCEEEECCCC
Confidence            268999998874

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.80  E-value=0.021  Score=46.90  Aligned_cols=97  Identities=18%  Similarity=0.177  Sum_probs=55.7

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC---CcccHHHHHHhhcCCCCccEEEEcc
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE---PNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~---~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      |+|+|+|++|...+..++..|. +|..+.+++ +.+.+++.|........+.   ........   ......+|+||-|+
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v   75 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV   75 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence            6899999999876666666898 899999887 7776665554322111000   00000000   01123799999998


Q ss_pred             CCh---hhHHHHHHhcccCCeEEEEEccC
Q 017201          271 GVP---SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       271 g~~---~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      =+.   +.++.....+.+. ..++.+...
T Consensus        76 Ka~~~~~~l~~l~~~~~~~-t~iv~~qNG  103 (151)
T PF02558_consen   76 KAYQLEQALQSLKPYLDPN-TTIVSLQNG  103 (151)
T ss_dssp             SGGGHHHHHHHHCTGEETT-EEEEEESSS
T ss_pred             cccchHHHHHHHhhccCCC-cEEEEEeCC
Confidence            554   2344444455554 677766433

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PLN03075 nicotianamine synthase; Provisional

Probab=94.79  E-value=0.17  Score=46.34  Aligned_cols=98  Identities=12%  Similarity=0.143  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcC-----CcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFG-----MTDFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg-----~~~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      .+.++|+-+|+|+.++.++.+++.+. ..+++.++.+++..+.+++.-     ...-+....   .+..+.   .....+
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~---~~~l~~  195 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDV---TESLKE  195 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhc---ccccCC
Confidence            37899999999999998888887553 338999999999888876532     111111110   112111   111237


Q ss_pred             ccEEEEcc-------CChhhHHHHHHhcccCCeEEEEE
Q 017201          263 VDYCFECT-------GVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       263 ~d~vid~~-------g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ||+||-.+       .-...+....+.|+++ |.++.=
T Consensus       196 FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr  232 (296)
T PLN03075        196 YDVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR  232 (296)
T ss_pred             cCEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence            99998765       1124678899999997 776644

>PRK07063 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.17  Score=45.50  Aligned_cols=80  Identities=19%  Similarity=0.184  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc-----CCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----GMTD-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +... +  .|-.+  .+++...+.+...
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   82 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE   82 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4789999988 9999988888888899 8999998877655432 21     2211 1  23322  1233333332211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -..+|++|++.|.
T Consensus        83 ~~g~id~li~~ag~   96 (260)
T PRK07063         83 AFGPLDVLVNNAGI   96 (260)
T ss_pred             HhCCCcEEEECCCc
Confidence             1269999999873

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.77  E-value=0.18  Score=44.78  Aligned_cols=79  Identities=25%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-FI--NPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    +.+... ++  |..+  .+...+.+.++.. -
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4788999998 9999998888888898 8999988877654432    223211 22  2222  1223333333221 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|.+.|
T Consensus        79 ~~~d~vi~~ag   89 (250)
T TIGR03206        79 GPVDVLVNNAG   89 (250)
T ss_pred             CCCCEEEECCC
Confidence            25899999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08589 short chain dehydrogenase; Validated

Probab=94.75  E-value=0.15  Score=46.25  Aligned_cols=79  Identities=16%  Similarity=0.236  Sum_probs=48.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-Hhh---hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGK---AFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~---~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++ ++.+ .++   +.+...   ..|-.+  .++..+.+.+... -
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   80 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999987777777898 89999988 4432 222   223211   123332  1233333333221 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|++.|.
T Consensus        81 g~id~li~~Ag~   92 (272)
T PRK08589         81 GRVDVLFNNAGV   92 (272)
T ss_pred             CCcCEEEECCCC
Confidence            258999998863

>PRK09242 tropinone reductase; Provisional

Probab=94.74  E-value=0.17  Score=45.34  Aligned_cols=80  Identities=11%  Similarity=0.126  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h---c--CCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---F--GMTD-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---l--g~~~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|+++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +   .  +... .  .|-.+  .++....+.+...
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   84 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            4789999988 9999998888888899 8999998887654432 1   1  2221 1  23322  1222222222211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -.++|++|.+.|.
T Consensus        85 ~~g~id~li~~ag~   98 (257)
T PRK09242         85 HWDGLHILVNNAGG   98 (257)
T ss_pred             HcCCCCEEEECCCC
Confidence             1269999999974

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.71  E-value=0.19  Score=45.32  Aligned_cols=94  Identities=20%  Similarity=0.196  Sum_probs=62.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc---EEeCCCCCCcccHHHHHHhhcCCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    |..   .++..      +.. .+..... .
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~-~l~~~~~-~  111 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQ-DIAQHLE-T  111 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHH-HHhhhcC-C
Confidence            5667999998874 7788888875 76 999999999888877642    321   12211      121 1222222 3


Q ss_pred             CccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEc
Q 017201          262 GVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       262 g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .||+|+....     . ...+..+.+.|+|+ |.++.+-
T Consensus       112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (255)
T PRK11036        112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF  149 (255)
T ss_pred             CCCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            7999985432     2 23578899999998 9987653

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.70  E-value=0.2  Score=44.03  Aligned_cols=96  Identities=24%  Similarity=0.254  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      -+|.+||=+|+|+ |+++.-+|+. |+ +|++++-+++-.+.++.-....  -+++..    ...+.+.+  .+..||+|
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~--~~~~FDvV  128 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLAS--AGGQFDVV  128 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHh--cCCCccEE
Confidence            5899999999963 6777777765 57 9999999998888876322211  144543    22333322  22479998


Q ss_pred             EE-----ccCChh-hHHHHHHhcccCCeEEEEEc
Q 017201          267 FE-----CTGVPS-LLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       267 id-----~~g~~~-~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +.     .+..++ .+..+.++++|+ |.++..-
T Consensus       129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST  161 (243)
T COG2227         129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLST  161 (243)
T ss_pred             EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence            64     445543 466789999997 8776553

>PRK12937 short chain dehydrogenase; Provisional

Probab=94.70  E-value=0.45  Score=42.05  Aligned_cols=80  Identities=14%  Similarity=0.094  Sum_probs=46.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKE----KGKAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~-~~~----~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      ++.++||+|+ |.+|...++.....|+ +|+.+.++.+ +.+    .++..+... .  .|-.+  .+++.+.+.+... 
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   80 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA   80 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            5689999988 9999998888888899 7777665432 221    222333321 1  22222  1223333322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|.+.|.
T Consensus        81 ~~~id~vi~~ag~   93 (245)
T PRK12937         81 FGRIDVLVNNAGV   93 (245)
T ss_pred             cCCCCEEEECCCC
Confidence            1268999998874

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.69  E-value=0.2  Score=44.05  Aligned_cols=74  Identities=19%  Similarity=0.180  Sum_probs=48.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+  .+++.+.+.+.. + .+|++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~-~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-H-HLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-h-cCcEEEEC
Confidence            5899988 9999988888878898 899999988776544 34444332 23333  123333333332 2 58999988


Q ss_pred             cC
Q 017201          270 TG  271 (375)
Q Consensus       270 ~g  271 (375)
                      .|
T Consensus        77 ag   78 (223)
T PRK05884         77 PA   78 (223)
T ss_pred             CC
Confidence            65

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.69  E-value=0.21  Score=47.78  Aligned_cols=35  Identities=20%  Similarity=0.224  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            66789999999999999999999999899999876

>PRK05854 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.21  Score=46.44  Aligned_cols=40  Identities=30%  Similarity=0.346  Sum_probs=33.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  230 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~  230 (375)
                      .|.+++|+|+ +++|...++.+...|+ +|+.+++++++.+.
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~   53 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEA   53 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            4689999998 9999988777777898 99999998876543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.68  E-value=0.15  Score=46.33  Aligned_cols=81  Identities=17%  Similarity=0.140  Sum_probs=52.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc------EEeCCCCCCcccHHHHHHhh
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT------DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~------~v~~~~~~~~~~~~~~i~~~  257 (375)
                      -.|..+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+...    ..+..      .+.|-.+  +++..+.+...
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~   82 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA   82 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence            46788999988 8999998888889999 9999999988865543    22221      1223322  12332222222


Q ss_pred             cC--CCCccEEEEccCC
Q 017201          258 TH--GMGVDYCFECTGV  272 (375)
Q Consensus       258 ~~--~~g~d~vid~~g~  272 (375)
                      ..  ..+.|+.+++.|.
T Consensus        83 ~~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHHhCCCCCEEEEcCCc
Confidence            21  1269999998874

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.16  Score=45.33  Aligned_cols=78  Identities=18%  Similarity=0.163  Sum_probs=47.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++..  ....... ..|..+  .+++.+.+..... ...+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~~--~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPETV--DGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhhh--cCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999988 9999988888878898 8999998776511  1111211 123322  1233333322211 1258999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |.+.|.
T Consensus        80 i~~ag~   85 (252)
T PRK07856         80 VNNAGG   85 (252)
T ss_pred             EECCCC
Confidence            998873

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.68  E-value=0.23  Score=45.67  Aligned_cols=92  Identities=17%  Similarity=0.263  Sum_probs=56.6

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHcCCCeEEEEc-CChh--hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGLGTVGLG-AVDGARMHGAAKIIGID-KNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Gag~~G~~-ai~la~~~G~~~V~~~~-~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -+|.|+|.|.+|.. +..+.+.-+. ++.++. .+++  .+++++++|.....+       ++...+ +...-.++|+||
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~~-------~ie~LL-~~~~~~dIDiVf   75 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSAE-------GIDGLL-AMPEFDDIDIVF   75 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCcccC-------CHHHHH-hCcCCCCCCEEE
Confidence            47899999999986 5555554456 666554 4443  335677788643221       222222 211124799999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEE
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ++++...+.+.+..++..+ -.++..
T Consensus        76 ~AT~a~~H~e~a~~a~eaG-k~VID~  100 (302)
T PRK08300         76 DATSAGAHVRHAAKLREAG-IRAIDL  100 (302)
T ss_pred             ECCCHHHHHHHHHHHHHcC-CeEEEC
Confidence            9999886777777777764 444443

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.66  E-value=0.31  Score=44.83  Aligned_cols=70  Identities=16%  Similarity=0.158  Sum_probs=47.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....        .+..+.+.      ..|+||.++..
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~------~aDivi~~vp~   65 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE------QADVIFTMVPD   65 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh------cCCEEEEecCC
Confidence            37889999999976666667788 89999999999888877765321        11222121      46788887766


Q ss_pred             hhhHH
Q 017201          273 PSLLS  277 (375)
Q Consensus       273 ~~~~~  277 (375)
                      ...+.
T Consensus        66 ~~~~~   70 (291)
T TIGR01505        66 SPQVE   70 (291)
T ss_pred             HHHHH
Confidence            53333

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.2  Score=44.80  Aligned_cols=80  Identities=15%  Similarity=0.125  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH-H---hhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE-K---GKAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~-~---~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++.++ .+ .   ++..+... .  .|-.+  .+++.+.+.+... 
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~   83 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE   83 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4779999988 9999998888888899 89988876532 12 2   22334221 1  23322  2333333333221 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -..+|++|++.|.
T Consensus        84 ~g~id~li~~ag~   96 (254)
T PRK06114         84 LGALTLAVNAAGI   96 (254)
T ss_pred             cCCCCEEEECCCC
Confidence            1258999999974

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.66  E-value=0.44  Score=43.89  Aligned_cols=56  Identities=23%  Similarity=0.232  Sum_probs=47.5

Q ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEe
Q 017201          184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~  240 (375)
                      ..+.+.||.++||=.. |.+|...+-+|...|+ +++++..   +.||...+++||+..+.
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            4567899999999987 9999999999999999 8888875   35788888999997764

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.36  Score=44.35  Aligned_cols=83  Identities=13%  Similarity=0.058  Sum_probs=48.4

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HhhhcCCcE-E--eCCCCCCcccHHHHHHhh
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE----KGKAFGMTD-F--INPDDEPNKSISELVKGI  257 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~----~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~  257 (375)
                      ..-++.++||+|+ |.+|...++.+...|+ +|+.+.+++++ .+    .++..+... +  .|-.+  .+.+.+.+.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i  118 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEET  118 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHH
Confidence            3445789999998 9999987777777898 88888776432 21    222234322 1  23322  12232223222


Q ss_pred             cC-CCCccEEEEccCC
Q 017201          258 TH-GMGVDYCFECTGV  272 (375)
Q Consensus       258 ~~-~~g~d~vid~~g~  272 (375)
                      .. ..++|++|.+.|.
T Consensus       119 ~~~~~~iD~lI~~Ag~  134 (290)
T PRK06701        119 VRELGRLDILVNNAAF  134 (290)
T ss_pred             HHHcCCCCEEEECCcc
Confidence            11 1268999998864

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=94.65  E-value=0.65  Score=39.26  Aligned_cols=45  Identities=29%  Similarity=0.350  Sum_probs=32.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      ....++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++
T Consensus        15 l~~~~~~~vLdlG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~   59 (179)
T TIGR00537        15 LRELKPDDVLEIGAGT-GLVAIRLKGK-GK-CILTTDINPFAVKELRE   59 (179)
T ss_pred             HHhcCCCeEEEeCCCh-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHH
Confidence            3455678899998863 5666666664 45 89999999988776653

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.62  E-value=0.3  Score=43.71  Aligned_cols=80  Identities=21%  Similarity=0.219  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD-F--INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++..  .+.+++++... .  .|-.+  .+++.+.+.+... ..+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence            4789999988 9999998888888899 88888754322  22333344321 1  22222  1233333333211 126


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus        86 ~D~li~~Ag~   95 (253)
T PRK08993         86 IDILVNNAGL   95 (253)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.60  E-value=0.35  Score=45.06  Aligned_cols=39  Identities=28%  Similarity=0.433  Sum_probs=32.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      .+|.|+|+|.+|..-++.+...|+ +|+..+.+++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence            579999999999876666667899 999999998766543

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.60  E-value=0.21  Score=46.18  Aligned_cols=80  Identities=15%  Similarity=0.185  Sum_probs=49.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hh----c-CCcE-E--eCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA----F-GMTD-F--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~----l-g~~~-v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      ..|.+|||+|+ |++|...++.....|+ +|+.++++.++.+.+ +.    . +... +  .|-.+  .++..+.+.++.
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~   90 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALR   90 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHH
Confidence            36789999998 9999988777777798 899999887765432 11    1 1111 1  23322  123333333332


Q ss_pred             C-CCCccEEEEccC
Q 017201          259 H-GMGVDYCFECTG  271 (375)
Q Consensus       259 ~-~~g~d~vid~~g  271 (375)
                      . -.++|++|++.|
T Consensus        91 ~~~~~iD~li~nAg  104 (306)
T PRK06197         91 AAYPRIDLLINNAG  104 (306)
T ss_pred             hhCCCCCEEEECCc
Confidence            1 126999999987

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=94.60  E-value=0.67  Score=42.41  Aligned_cols=59  Identities=17%  Similarity=0.276  Sum_probs=46.3

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEeCCC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ....++||++|+=-=+|..|.+.+.+|+..|+ +++.+..   +++|.++++.+|+..+..+.
T Consensus        55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            45669999965554449999999999999999 5655543   57889999999998876655

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.56  E-value=0.22  Score=45.28  Aligned_cols=79  Identities=24%  Similarity=0.208  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.    ..+... .  .|-.+  ..+....+.+... -
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   85 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF   85 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4788999988 9999988888888899 8999998876554322    223221 1  23222  1223333332221 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      ..+|++|++.|
T Consensus        86 g~id~li~~ag   96 (278)
T PRK08277         86 GPCDILINGAG   96 (278)
T ss_pred             CCCCEEEECCC
Confidence            26999999987

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.55  E-value=0.24  Score=44.39  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=48.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC---CcE-EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG---MTD-FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg---~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      +.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. .+.   +.. ..|-.+  .+.+...+.+... -.++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            468999998 9999987777777898 8999998887765432 221   211 123322  1222223322211 1258


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|.+.|.
T Consensus        79 d~vi~~ag~   87 (257)
T PRK07074         79 DVLVANAGA   87 (257)
T ss_pred             CEEEECCCC
Confidence            999999974

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.55  E-value=0.25  Score=45.15  Aligned_cols=87  Identities=17%  Similarity=0.252  Sum_probs=55.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|.....   .   .+. +.+      .+.|+||-|+..
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~------~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL------KDCDLVILALPI   67 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh------cCCCEEEEcCCH
Confidence            68899999999877777677788 899999999988888777742111   1   111 111      258999998875


Q ss_pred             hhh---HHHHHHhcccCCeEEEEEc
Q 017201          273 PSL---LSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       273 ~~~---~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...   ++.....+.++ ..+..++
T Consensus        68 ~~~~~~~~~l~~~l~~~-~ii~d~~   91 (279)
T PRK07417         68 GLLLPPSEQLIPALPPE-AIVTDVG   91 (279)
T ss_pred             HHHHHHHHHHHHhCCCC-cEEEeCc
Confidence            422   23333444544 4444444

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.22  Score=45.32  Aligned_cols=78  Identities=19%  Similarity=0.199  Sum_probs=49.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC--c-EE--eCCCCCCcccHHHHHHhhcC-
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--T-DF--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~--~-~v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.    ..+.  . .+  .|..+  .+++.+ +.+... 
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~   78 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE   78 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence            568999998 9999988888778899 8999998877654432    2221  1 11  23333  223333 333221 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|+++.+.|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence            1268999999864

>PRK06482 short chain dehydrogenase; Provisional

Probab=94.51  E-value=0.25  Score=44.76  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=49.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCc--E-EeCCCCCCcccHHHHHHhhc-CCCCccE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMT--D-FINPDDEPNKSISELVKGIT-HGMGVDY  265 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~--~-v~~~~~~~~~~~~~~i~~~~-~~~g~d~  265 (375)
                      .++||+|+ |.+|...++.+...|+ +|+++++++++.+.+++. +..  . ..|-.+  .+.+.+.+.+.. ...++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            57999988 9999987777777898 899999988776655432 221  1 123322  122333333221 1226899


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9999863

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.51  E-value=0.22  Score=45.32  Aligned_cols=104  Identities=14%  Similarity=0.195  Sum_probs=62.7

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHh-hhcCCcEE--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKG-KAFGMTDF--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga---g~~G~~ai~la~~~G~~~V~~~~~~~~---~~~~~-~~lg~~~v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+   +++|.+.++.+...|+ +|+.+.++.+   +.+.+ ++++....  .|-.+  .+...+.+.+... 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence            4789999987   4899988877777899 8988887742   22222 33443222  23333  2333333333322 


Q ss_pred             CCCccEEEEccCCh--------------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          260 GMGVDYCFECTGVP--------------S---------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       260 ~~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ...+|++|++.|..              +               ..+.++..+..+ |+++.++...
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~  146 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG  146 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence            12699999998731              0               223455566666 8888886543

>PRK06720 hypothetical protein; Provisional

Probab=94.51  E-value=0.28  Score=41.23  Aligned_cols=80  Identities=18%  Similarity=0.174  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhc-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-HG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~-~~  260 (375)
                      ++..++|.|+ +++|...+......|+ +|+.++++.+..+..    ++.+... +  .|..+  .+++.+.+.+.. .-
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~v~~~~~~~   91 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK--QGDWQRVISITLNAF   91 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 8899987777777898 899999876654322    2234322 1  22222  122222222211 11


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        92 G~iDilVnnAG~  103 (169)
T PRK06720         92 SRIDMLFQNAGL  103 (169)
T ss_pred             CCCCEEEECCCc
Confidence            268999988774

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.51  E-value=0.2  Score=44.26  Aligned_cols=69  Identities=25%  Similarity=0.322  Sum_probs=49.1

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          194 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       194 VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      |+|+|+ |.+|...++.+...+. +|.++.++..+  .+.+++.|+..+. |..+   .   +.+.+...  |+|.||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~---~---~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYDD---P---ESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT----H---HHHHHHHT--TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccCC---H---HHHHHHHc--CCceEEee
Confidence            789998 9999999988888888 89999988643  4556778887553 2222   2   22322222  79999998


Q ss_pred             cC
Q 017201          270 TG  271 (375)
Q Consensus       270 ~g  271 (375)
                      .+
T Consensus        72 ~~   73 (233)
T PF05368_consen   72 TP   73 (233)
T ss_dssp             SS
T ss_pred             cC
Confidence            88

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.49  E-value=0.68  Score=40.64  Aligned_cols=116  Identities=9%  Similarity=-0.052  Sum_probs=64.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      ..+.+|||+|+|.++.-=++.+...|+ +|++++..-. ....+.+.+....+ .+++...+    +      .++++||
T Consensus        23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~d----l------~g~~LVi   90 (223)
T PRK05562         23 SNKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKEF----I------KDKHLIV   90 (223)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChHH----h------CCCcEEE
Confidence            357899999999999887777778898 8888875432 22222223332222 12211111    1      2789999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEE
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGT  318 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~  318 (375)
                      -+++.+ .++..+...+...+.++...... ...++-...++.+ .+++.-|
T Consensus        91 aATdD~-~vN~~I~~~a~~~~~lvn~vd~p-~~~dFi~PAiv~rg~l~IaIS  140 (223)
T PRK05562         91 IATDDE-KLNNKIRKHCDRLYKLYIDCSDY-KKGLCIIPYQRSTKNFVFALN  140 (223)
T ss_pred             ECCCCH-HHHHHHHHHHHHcCCeEEEcCCc-ccCeEEeeeEEecCCEEEEEE
Confidence            999887 55555555543225555554322 2233333334434 3555444

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.49  E-value=0.52  Score=42.03  Aligned_cols=38  Identities=18%  Similarity=0.117  Sum_probs=29.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKK  228 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~  228 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+.+. +++++.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~   42 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA   42 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence            4689999988 9999998888888898 787764 444443

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.48  E-value=0.26  Score=44.00  Aligned_cols=80  Identities=19%  Similarity=0.256  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    +..+... .  .|-.+  .+.+.+.+..... .
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   84 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence            4778999988 9999988887778898 899999887765433    2223221 1  23332  1233333322211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|.+.|.
T Consensus        85 ~~id~vi~~ag~   96 (254)
T PRK08085         85 GPIDVLINNAGI   96 (254)
T ss_pred             CCCCEEEECCCc
Confidence            269999999974

>PRK08328 hypothetical protein; Provisional

Probab=94.48  E-value=0.24  Score=43.88  Aligned_cols=35  Identities=31%  Similarity=0.438  Sum_probs=30.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45789999999999999999999999899998854

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.47  E-value=0.15  Score=45.30  Aligned_cols=80  Identities=18%  Similarity=0.133  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.+|||+|+ |.+|...+..+...|+ +|+++++++++...+    ++.+... ++  |-.+  .+.+.+.+.+... -
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            4678999998 9999988877777898 899999886654332    2233221 12  3222  1223333322221 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|.+.+.
T Consensus        82 ~~~d~vi~~ag~   93 (251)
T PRK12826         82 GRLDILVANAGI   93 (251)
T ss_pred             CCCCEEEECCCC
Confidence            258999999854

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.47  E-value=0.24  Score=44.30  Aligned_cols=80  Identities=14%  Similarity=0.162  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.++ ++..+.++..+...+ .|-.+  .++..+.+.+... -.++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4688999988 9999998888878898 78776544 333344443343222 23333  2333333333221 126999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998864

>PLN02928 oxidoreductase family protein

Probab=94.45  E-value=0.32  Score=45.97  Aligned_cols=96  Identities=20%  Similarity=0.364  Sum_probs=59.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-----CcEEeCC-CCCCcccHHHHHHhhcCCCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-----MTDFINP-DDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-----~~~v~~~-~~~~~~~~~~~i~~~~~~~g  262 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.+++..+... ..++     ...+.+. ..  ..++.+.+.      .
T Consensus       157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~L~ell~------~  226 (347)
T PLN02928        157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGG--HEDIYEFAG------E  226 (347)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCc--ccCHHHHHh------h
Confidence            357899999999999999999999999 99999876332211 1110     0001100 01  023333332      4


Q ss_pred             ccEEEEccCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201          263 VDYCFECTGVPS----LL-SEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       263 ~d~vid~~g~~~----~~-~~~~~~l~~~~G~iv~~g~  295 (375)
                      .|+|+.+....+    .+ ...+..++++ ..++.++.
T Consensus       227 aDiVvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR  263 (347)
T PLN02928        227 ADIVVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR  263 (347)
T ss_pred             CCEEEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence            799888875321    12 3677888887 88888763

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.44  E-value=0.38  Score=48.62  Aligned_cols=75  Identities=13%  Similarity=0.151  Sum_probs=56.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      ++++|.|.|.+|...++..+..|. .+++++.++++.+.+++.|...+.-...  +++.   +++ .+=..+|.++-+++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~--~~~~---L~~-a~i~~a~~viv~~~  490 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA--NEEI---MQL-AHLDCARWLLLTIP  490 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC--CHHH---HHh-cCccccCEEEEEcC
Confidence            689999999999999999999998 8999999999999999888765542221  1222   222 22237888877776


Q ss_pred             Ch
Q 017201          272 VP  273 (375)
Q Consensus       272 ~~  273 (375)
                      ++
T Consensus       491 ~~  492 (558)
T PRK10669        491 NG  492 (558)
T ss_pred             Ch
Confidence            64

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.44  E-value=0.2  Score=43.24  Aligned_cols=35  Identities=14%  Similarity=0.357  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|.-.++.+-..|..+++.++.+
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            56789999999999999999999999889999854

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.44  E-value=0.22  Score=44.65  Aligned_cols=79  Identities=20%  Similarity=0.223  Sum_probs=48.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h----cCC--cEEe--CCCCCCcccHHHHHHhhcC-
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A----FGM--TDFI--NPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~----lg~--~~v~--~~~~~~~~~~~~~i~~~~~-  259 (375)
                      ++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +    .+.  ...+  |-.+  .++....+.+... 
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~   78 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI   78 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence            568999988 9999988877777898 8999998876554332 1    221  1111  3222  1223322322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -..+|++|++.|.
T Consensus        79 ~~~id~vv~~ag~   91 (259)
T PRK12384         79 FGRVDLLVYNAGI   91 (259)
T ss_pred             cCCCCEEEECCCc
Confidence            1268999998873

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.40  E-value=0.24  Score=43.75  Aligned_cols=80  Identities=11%  Similarity=0.224  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+    +..+... ++  |-.+  ...+.+.+.+... -
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD--YEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            3678999988 9999988887778899 999999987665432    2223222 11  2222  1233333333221 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|.+.|.
T Consensus        83 ~~id~vi~~ag~   94 (239)
T PRK07666         83 GSIDILINNAGI   94 (239)
T ss_pred             CCccEEEEcCcc
Confidence            268999998864

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.39  E-value=0.86  Score=35.43  Aligned_cols=90  Identities=19%  Similarity=0.313  Sum_probs=60.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGLGAVDGARMH--GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~--G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|+|+|+|.+|.....-.+..  +. +++ ++++++++.+. .++++.. .+.       ++.+.+..    .++|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~~-------~~~~ll~~----~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VYT-------DLEELLAD----EDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EES-------SHHHHHHH----TTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-chh-------HHHHHHHh----hcCCEEEE
Confidence            688999999998776555544  44 555 45566666655 4567777 332       23333322    27999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++....+.+.+..++..+  +-+.+..+.
T Consensus        69 ~tp~~~h~~~~~~~l~~g--~~v~~EKP~   95 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAG--KHVLVEKPL   95 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTT--SEEEEESSS
T ss_pred             ecCCcchHHHHHHHHHcC--CEEEEEcCC
Confidence            999887888888888875  456665443

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK08226 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.22  Score=44.77  Aligned_cols=80  Identities=21%  Similarity=0.275  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh---cCCcE---EeCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD---FINPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+++   .+...   ..|-.+  .+++.+.+.+... -.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            4689999988 9999988888888899 89999887654333322   23221   123322  1222222222211 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      .+|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (263)
T PRK08226         82 RIDILVNNAGV   92 (263)
T ss_pred             CCCEEEECCCc
Confidence            58999998873

>TIGR00417 speE spermidine synthase

Probab=94.37  E-value=0.55  Score=42.69  Aligned_cols=102  Identities=12%  Similarity=0.007  Sum_probs=60.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCC--CcccHHHHHHhhcCCCCcc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDE--PNKSISELVKGITHGMGVD  264 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~--~~~~~~~~i~~~~~~~g~d  264 (375)
                      ...++||++|+|. |..+..++++....++++++.+++-.+.+++.-.  ...++....  ...+..+.+++.  ...||
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~--~~~yD  147 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT--ENTFD  147 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC--CCCcc
Confidence            3456999998865 5456677776656689999999877776665210  000100000  001233333332  23799


Q ss_pred             EEEEccC----------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          265 YCFECTG----------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       265 ~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +||-...          ..+.++.+.+.|+++ |.++...
T Consensus       148 vIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       148 VIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             EEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            9865332          223567888999998 9988763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.36  E-value=0.27  Score=44.07  Aligned_cols=79  Identities=18%  Similarity=0.285  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD---FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++...   ..|-.+  .++..+.+.+... ...+
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            3678999998 9999988888888899 8999999887765443 233211   122222  1233333332211 1258


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |++|.+.+
T Consensus        82 d~li~~ag   89 (257)
T PRK07067         82 DILFNNAA   89 (257)
T ss_pred             CEEEECCC
Confidence            99999886

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.35  E-value=0.52  Score=43.40  Aligned_cols=70  Identities=17%  Similarity=0.182  Sum_probs=47.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....        .+..+.+      ...|+||.++..
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~------~~~d~vi~~vp~   68 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVA------EQCDVIITMLPN   68 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHH------hcCCEEEEeCCC
Confidence            68999999999876666666788 89999999988887776665321        1122211      146788777765


Q ss_pred             hhhHH
Q 017201          273 PSLLS  277 (375)
Q Consensus       273 ~~~~~  277 (375)
                      .....
T Consensus        69 ~~~~~   73 (296)
T PRK11559         69 SPHVK   73 (296)
T ss_pred             HHHHH
Confidence            44333

>PLN02253 xanthoxin dehydrogenase

Probab=94.35  E-value=0.22  Score=45.32  Aligned_cols=80  Identities=19%  Similarity=0.124  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC----cE-EeCCCCCCcccHHHHHHhhcCC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM----TD-FINPDDEPNKSISELVKGITHG-M  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~----~~-v~~~~~~~~~~~~~~i~~~~~~-~  261 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ..++.    .. ..|-.+  .+.+.+.+...... .
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            4688999988 9999987777777898 899998876654332 22321    11 123332  12333333322111 2


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            59999998863

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.34  E-value=0.22  Score=45.23  Aligned_cols=79  Identities=11%  Similarity=0.108  Sum_probs=49.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD-F--INPDDEPNKSISELVKGITH-GMGVD  264 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~d  264 (375)
                      +.+|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ ++... .  .|..+  .+.+...+..... -.++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence            468999998 9999988777777798 89999998877655433 22111 1  22222  1223222222211 12689


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      .+|.+.|.
T Consensus        80 ~vi~~ag~   87 (275)
T PRK08263         80 IVVNNAGY   87 (275)
T ss_pred             EEEECCCC
Confidence            99999874

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.33  E-value=0.19  Score=44.36  Aligned_cols=101  Identities=24%  Similarity=0.326  Sum_probs=64.8

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG  256 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~  256 (375)
                      ....++++++||=+|+|. |..+..+++..+. .+|++++.+++..+.+++    .+.+.  ++..+      ... + .
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~-~-~  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGN------AME-L-P  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEec------hhc-C-C
Confidence            455778999999999864 6677788887642 289999999887766653    22221  22111      110 0 1


Q ss_pred             hcCCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEcc
Q 017201          257 ITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       257 ~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      . ....+|+|+-+..     . ...+..+.+.|+++ |.++....
T Consensus       110 ~-~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  152 (231)
T TIGR02752       110 F-DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET  152 (231)
T ss_pred             C-CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence            1 2236999875422     1 23577889999997 99987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.33  E-value=0.43  Score=43.16  Aligned_cols=103  Identities=17%  Similarity=0.157  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcC-------Cc--EEeCCCCCCcccHHHH
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFG-------MT--DFINPDDEPNKSISEL  253 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg-------~~--~v~~~~~~~~~~~~~~  253 (375)
                      +..+++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++..       ..  .++..+.   .+    
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~----  138 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TD----  138 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---cc----
Confidence            345778999999999864 6677788887652 38999999998887775321       11  1121111   01    


Q ss_pred             HHhhcCCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEccCC
Q 017201          254 VKGITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      + .+ ....||.|+-+.+     . ...+.++.+.|+|+ |+++.+....
T Consensus       139 l-p~-~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~  185 (261)
T PLN02233        139 L-PF-DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK  185 (261)
T ss_pred             C-CC-CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence            1 11 2236999875432     1 23688999999998 9998875443

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.32  E-value=0.24  Score=44.00  Aligned_cols=78  Identities=17%  Similarity=0.228  Sum_probs=48.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----c--CCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----F--GMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----l--g~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .  +... +  .|..+  .+++.+.+.+... 
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            568999988 9999976666666788 89999988877654321    1  2111 1  23333  2233333333221 


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      -.++|++|.+.|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence            126999999886

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.31  E-value=0.19  Score=45.60  Aligned_cols=79  Identities=24%  Similarity=0.246  Sum_probs=48.2

Q ss_pred             CCCCCEEEEECC-CHHHHH-HHHHHHHcCCCeEEEEcCChhhH----HHhhhcC-C-cEEeCCCCCCcccHH---HHHHh
Q 017201          188 VEKGSSVAVLGL-GTVGLG-AVDGARMHGAAKIIGIDKNPWKK----EKGKAFG-M-TDFINPDDEPNKSIS---ELVKG  256 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~-ai~la~~~G~~~V~~~~~~~~~~----~~~~~lg-~-~~v~~~~~~~~~~~~---~~i~~  256 (375)
                      --.|+.|||+|+ +++|.+ |.++|+ .|+ +++..+.+++..    +.+++.| + .+..|-.+  .++..   +.+++
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~-rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAK-RGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKK  110 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHH-hCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHH
Confidence            357899999988 899985 555555 566 788888765443    3444444 2 22334333  13333   33433


Q ss_pred             hcCCCCccEEEEccCC
Q 017201          257 ITHGMGVDYCFECTGV  272 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~  272 (375)
                      .-+  .+|++++++|-
T Consensus       111 e~G--~V~ILVNNAGI  124 (300)
T KOG1201|consen  111 EVG--DVDILVNNAGI  124 (300)
T ss_pred             hcC--CceEEEecccc
Confidence            332  69999999873

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.30  E-value=0.15  Score=46.29  Aligned_cols=46  Identities=17%  Similarity=0.096  Sum_probs=38.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      +...+++++|+|+|+.+.+++..++..|+.+|+++.++++|.+.+.
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la  163 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA  163 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            4455679999999999999888888899878999999998876554

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.30  E-value=0.39  Score=46.82  Aligned_cols=105  Identities=12%  Similarity=0.160  Sum_probs=65.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKG  256 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~  256 (375)
                      ....+++|++||=+|+|+ |..+.++++..+..+|++++.++++.+.++    .+|... +  .+.+.   ...    ..
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~~  303 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----SQ  303 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----cc
Confidence            456788999999998754 445556666665339999999999987654    456542 2  22111   111    00


Q ss_pred             hcCCCCccEEEE---ccCC-------------------------hhhHHHHHHhcccCCeEEEEEccCC
Q 017201          257 ITHGMGVDYCFE---CTGV-------------------------PSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       257 ~~~~~g~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ......||.||-   |+|.                         ...+..++++|+++ |+++..-.+-
T Consensus       304 ~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs~  371 (426)
T TIGR00563       304 WAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCSV  371 (426)
T ss_pred             cccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCCC
Confidence            112336999863   3432                         13567799999998 9988664443

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.29  E-value=0.27  Score=47.33  Aligned_cols=82  Identities=21%  Similarity=0.271  Sum_probs=51.4

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-------Hhhhc-CCcEE-eCCCCCCcccHHHHHH
Q 017201          186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-------KGKAF-GMTDF-INPDDEPNKSISELVK  255 (375)
Q Consensus       186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~-------~~~~l-g~~~v-~~~~~~~~~~~~~~i~  255 (375)
                      .....+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+       ..... ++..+ .|..+  .+.+.+.++
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~  131 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF  131 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence            34567789999998 9999998888888898 8999998765431       11112 23322 23333  122333333


Q ss_pred             hhcCCCCccEEEEccCC
Q 017201          256 GITHGMGVDYCFECTGV  272 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~  272 (375)
                      ..  +.++|+||+|.+.
T Consensus       132 ~~--~~~~D~Vi~~aa~  146 (390)
T PLN02657        132 SE--GDPVDVVVSCLAS  146 (390)
T ss_pred             Hh--CCCCcEEEECCcc
Confidence            22  1169999998864

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.28  E-value=0.24  Score=43.31  Aligned_cols=35  Identities=20%  Similarity=0.296  Sum_probs=30.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            55789999999999988888888899889999876

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.28  E-value=0.33  Score=43.20  Aligned_cols=42  Identities=26%  Similarity=0.261  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE  229 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~  229 (375)
                      ...++.++||+|+ |.+|...++.+...|+ +|++++++.++.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~   50 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLE   50 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHH
Confidence            4568899999988 9999987777777898 9999998876643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.26  E-value=0.23  Score=44.43  Aligned_cols=80  Identities=16%  Similarity=0.089  Sum_probs=49.6

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc--CCcEE-eCCCCCCcccHHHHHHhhcCCC
Q 017201          186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF--GMTDF-INPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l--g~~~v-~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      +.-..+.+|||+|+ |.+|...++.+...|+ +|+++.+++++.......  ++..+ .|..+   . . ..+.+... .
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~-~-~~l~~~~~-~   84 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G-S-DKLVEAIG-D   84 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C-H-HHHHHHhh-c
Confidence            33445689999998 9999988887777898 899998887765433211  23222 23222   1 1 12222221 2


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|+||.+.|.
T Consensus        85 ~~d~vi~~~g~   95 (251)
T PLN00141         85 DSDAVICATGF   95 (251)
T ss_pred             CCCEEEECCCC
Confidence            69999988764

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.24  E-value=0.56  Score=42.78  Aligned_cols=87  Identities=23%  Similarity=0.225  Sum_probs=58.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|.++|.|.+|.-.++=+...|+ .|.+.++++++ .+++++.|+...-+        ..+.+.      ..|+||-++.
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s--------~~eaa~------~aDvVitmv~   66 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS--------PAEAAA------EADVVITMLP   66 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC--------HHHHHH------hCCEEEEecC
Confidence            67889999999976666667788 99999999999 88888888764321        222221      4778887777


Q ss_pred             ChhhHHHHH-------HhcccCCeEEEEEcc
Q 017201          272 VPSLLSEAL-------ETTKVGKGKVIVIGV  295 (375)
Q Consensus       272 ~~~~~~~~~-------~~l~~~~G~iv~~g~  295 (375)
                      +++.....+       ..++++ ..++.++.
T Consensus        67 ~~~~V~~V~~g~~g~~~~~~~G-~i~IDmST   96 (286)
T COG2084          67 DDAAVRAVLFGENGLLEGLKPG-AIVIDMST   96 (286)
T ss_pred             CHHHHHHHHhCccchhhcCCCC-CEEEECCC
Confidence            765544433       233454 56665543

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=94.24  E-value=0.74  Score=40.12  Aligned_cols=98  Identities=19%  Similarity=0.238  Sum_probs=60.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +++|++||=+|+|+ |..+..+++..+. .+|++++.++..    ..-++ .++..+- ........+.+......+|+|
T Consensus        49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~-~~~~~~~~i~~~~~~~~~D~V  121 (209)
T PRK11188         49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDF-RDELVLKALLERVGDSKVQVV  121 (209)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCC-CChHHHHHHHHHhCCCCCCEE
Confidence            58899999999864 5566666676653 389999987621    11122 2332221 112233444443344579999


Q ss_pred             EEcc-----CC------------hhhHHHHHHhcccCCeEEEEE
Q 017201          267 FECT-----GV------------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       267 id~~-----g~------------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      +...     +.            ...++.+.+.|+++ |.++..
T Consensus       122 ~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~  164 (209)
T PRK11188        122 MSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK  164 (209)
T ss_pred             ecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence            8644     22            12567889999998 988874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.22  E-value=0.25  Score=44.09  Aligned_cols=80  Identities=23%  Similarity=0.233  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.+|||+|+ |.+|...++.....|+ +|+++++++++.+.+.    +.+...   ..|-.+  .+++.+.+.++.. .
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   79 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4679999998 9999988887777898 8999999887765432    223221   123332  1223232322211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|.+.+.
T Consensus        80 ~~~d~vi~~a~~   91 (258)
T PRK12429         80 GGVDILVNNAGI   91 (258)
T ss_pred             CCCCEEEECCCC
Confidence            269999998863

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.22  E-value=0.32  Score=44.22  Aligned_cols=81  Identities=17%  Similarity=0.254  Sum_probs=48.6

Q ss_pred             CCCCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHh-hhcCCcEE--eCCCCCCcccHHHHHHhhc
Q 017201          188 VEKGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       188 ~~~g~~VlI~Ga---g~~G~~ai~la~~~G~~~V~~~~~~~---~~~~~~-~~lg~~~v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      .-.|+++||+|+   +++|.+.++.+...|+ +|+.+.+++   ++.+.+ ++++....  .|-.+  .++..+.+.++.
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~   83 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLE   83 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHH
Confidence            446789999987   5899987777777899 888887653   233222 33453222  23222  233333333332


Q ss_pred             CC-CCccEEEEccC
Q 017201          259 HG-MGVDYCFECTG  271 (375)
Q Consensus       259 ~~-~g~d~vid~~g  271 (375)
                      .. ..+|++|++.|
T Consensus        84 ~~~g~iD~lv~nAG   97 (272)
T PRK08159         84 KKWGKLDFVVHAIG   97 (272)
T ss_pred             HhcCCCcEEEECCc
Confidence            21 26999999986

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.20  E-value=0.27  Score=44.32  Aligned_cols=80  Identities=14%  Similarity=0.227  Sum_probs=46.9

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga---g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +|.++||+|+   +++|.+.++.+...|+ +|+.+.+++...+.++    +++....  .|-.+  .++..+.+.+... 
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   81 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH   81 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence            5789999984   5899987777777899 8888765532222222    2232222  23322  2333333333322 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus        82 ~g~iD~lVnnAG~   94 (261)
T PRK08690         82 WDGLDGLVHSIGF   94 (261)
T ss_pred             hCCCcEEEECCcc
Confidence            1269999999863

>PRK06484 short chain dehydrogenase; Validated

Probab=94.18  E-value=0.24  Score=49.50  Aligned_cols=80  Identities=20%  Similarity=0.273  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      +|+++||+|+ +++|...++.+...|+ +|+.++++.++.+.+ ++++...   ..|-.+  .+++.+.+.+... ..++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            5789999988 9999998888888899 999999888876544 3455322   233333  2333333333221 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999999864

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.17  E-value=0.59  Score=42.95  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=33.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      .+|.|+|+|.+|...++.+...|. +|+..+.++++.+.+
T Consensus         4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~   42 (291)
T PRK06035          4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA   42 (291)
T ss_pred             cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence            579999999999987777777898 899999999887654

>PRK06940 short chain dehydrogenase; Provisional

Probab=94.15  E-value=0.3  Score=44.44  Aligned_cols=78  Identities=21%  Similarity=0.229  Sum_probs=47.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcCCCCc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      +++++|.|+|++|...++.+. .|+ +|+.+++++++.+.+    +..+... +  .|-.+  .+.+.+.+.+...-.++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence            356788899999998777664 688 999999887665433    2223321 1  23333  23333333332111269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        78 d~li~nAG~   86 (275)
T PRK06940         78 TGLVHTAGV   86 (275)
T ss_pred             CEEEECCCc
Confidence            999999974

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=94.15  E-value=0.27  Score=45.62  Aligned_cols=96  Identities=11%  Similarity=0.114  Sum_probs=55.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcEEeCCCCCCcccHHHHHHhhc--CCCCccEEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGIT--HGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~~~i~~~~--~~~g~d~vid  268 (375)
                      .+|+|+|+|++|....-.+...|. .|+.+++++++.+.+++- |.. +.....   .... ......  ....+|+||-
T Consensus         3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~---~~~~-~~~~~~~~~~~~~D~viv   76 (305)
T PRK05708          3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ---ASLY-AIPAETADAAEPIHRLLL   76 (305)
T ss_pred             ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc---ceee-ccCCCCcccccccCEEEE
Confidence            369999999999865555555687 899999887777766543 432 211111   0000 000000  1126899998


Q ss_pred             ccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          269 CTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       269 ~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      |+=+.   +.+......+.++ ..++.+.
T Consensus        77 ~vK~~~~~~al~~l~~~l~~~-t~vv~lQ  104 (305)
T PRK05708         77 ACKAYDAEPAVASLAHRLAPG-AELLLLQ  104 (305)
T ss_pred             ECCHHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence            87433   2344455556666 6666664

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.14  E-value=0.33  Score=43.05  Aligned_cols=38  Identities=11%  Similarity=0.219  Sum_probs=32.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  230 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~  230 (375)
                      .+++|+|+ |.+|...++.+...|+ +|+++++++++.+.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~   40 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER   40 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            47899988 9999988887778898 89999998876643

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.14  E-value=0.25  Score=47.62  Aligned_cols=74  Identities=23%  Similarity=0.305  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC--CcE-EeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG--MTD-FINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg--~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      .|++++|+|+ |++|.+.++.....|+ +|+++++++++.+... ...  ... ..|-.+   .   +.+.+..+  ++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~---~~v~~~l~--~ID  247 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---E---AALAELLE--KVD  247 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---H---HHHHHHhC--CCC
Confidence            4789999998 9999988887777898 8999988876653221 111  111 123322   1   12222222  699


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      ++|++.|.
T Consensus       248 iLInnAGi  255 (406)
T PRK07424        248 ILIINHGI  255 (406)
T ss_pred             EEEECCCc
Confidence            99998763

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.09  E-value=0.57  Score=43.87  Aligned_cols=95  Identities=19%  Similarity=0.078  Sum_probs=61.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCC----C-CcccHHHHHHhhcCCCCccE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDD----E-PNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~----~-~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .+|.|+|+|.+|.+.+..+...|. +|+..++++++.+.+.+.+..... +...    . ...+..+.+      ...|+
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~------~~aD~   77 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL------AGADF   77 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH------cCCCE
Confidence            479999999999987777777788 899999988887766543211000 0000    0 001222221      15899


Q ss_pred             EEEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          266 CFECTGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ||-++.+. .+...+..++++ -.++.+..
T Consensus        78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence            99999887 567787888886 66665643

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.08  E-value=0.52  Score=43.13  Aligned_cols=36  Identities=25%  Similarity=0.301  Sum_probs=29.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      -.+.++||+|+ +++|...++.+...|+ +|++++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            45789999988 9999987777777898 888887654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.06  E-value=0.21  Score=47.23  Aligned_cols=76  Identities=17%  Similarity=0.150  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC----CcEE-eCCCCCCcccHHHHHHhhcCCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG----MTDF-INPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg----~~~v-~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      .|.+|||+|+ |.+|...++.+...|+ +|++++++++..... ..++    ...+ .|-.+   .   +.+.++....+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~---~~~~~~~~~~~   75 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---A---AKLRKAIAEFK   75 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---H---HHHHHHHhhcC
Confidence            4689999988 9999998888888898 899998776543221 1121    1111 12222   1   12333322336


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+||++.+.
T Consensus        76 ~d~vih~A~~   85 (349)
T TIGR02622        76 PEIVFHLAAQ   85 (349)
T ss_pred             CCEEEECCcc
Confidence            8999999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK14982 acyl-ACP reductase; Provisional

Probab=94.05  E-value=0.29  Score=45.85  Aligned_cols=95  Identities=18%  Similarity=0.163  Sum_probs=61.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      -.+.+|+|+|+ |.+|..+++.+. ..|.++++.+.+++++...+. +++...+        .++.    +...  +.|+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i--------~~l~----~~l~--~aDi  218 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI--------LSLE----EALP--EADI  218 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH--------HhHH----HHHc--cCCE
Confidence            46789999999 999987776665 457669999998887776553 3321111        1222    2222  5899


Q ss_pred             EEEccCChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201          266 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      |+.+++.+..+..--..+++. -.++.++.+.+
T Consensus       219 Vv~~ts~~~~~~I~~~~l~~~-~~viDiAvPRD  250 (340)
T PRK14982        219 VVWVASMPKGVEIDPETLKKP-CLMIDGGYPKN  250 (340)
T ss_pred             EEECCcCCcCCcCCHHHhCCC-eEEEEecCCCC
Confidence            999998754421111344665 78888887764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.04  E-value=0.37  Score=43.59  Aligned_cols=79  Identities=16%  Similarity=0.228  Sum_probs=46.4

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEE--eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDF--INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v--~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .|+++||+|+ +  ++|.+.++.....|+ +|+.+.+++...+.+++    .+....  .|-.+  .+++.+.+.+....
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   81 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV   81 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence            5789999988 3  799987777777898 88888776321122222    222112  23322  23344444333221


Q ss_pred             -CCccEEEEccC
Q 017201          261 -MGVDYCFECTG  271 (375)
Q Consensus       261 -~g~d~vid~~g  271 (375)
                       ..+|++|++.|
T Consensus        82 ~g~iD~linnAg   93 (262)
T PRK07984         82 WPKFDGFVHSIG   93 (262)
T ss_pred             cCCCCEEEECCc
Confidence             25899999997

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=94.03  E-value=0.45  Score=43.43  Aligned_cols=101  Identities=13%  Similarity=0.104  Sum_probs=65.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-E--EeCCCC-CCcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-D--FINPDD-EPNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-~--v~~~~~-~~~~~~~~~i~~~~~~~g~  263 (375)
                      .+| .+|||+|+|. |-.+-.++|+....++++++.+++=.++++++=.. .  ..|++- ....|-.+.+++...  +|
T Consensus        75 ~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~--~f  150 (282)
T COG0421          75 PNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE--KF  150 (282)
T ss_pred             CCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC--cC
Confidence            344 6999997763 55677888888888999999999988888763211 0  001110 001234445554433  79


Q ss_pred             cEEE-EccCC---------hhhHHHHHHhcccCCeEEEEE
Q 017201          264 DYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       264 d~vi-d~~g~---------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      |+|| |+...         .+..+..-++|+++ |.++.-
T Consensus       151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence            9974 44432         34678899999998 888776

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.02  E-value=0.6  Score=43.81  Aligned_cols=87  Identities=23%  Similarity=0.263  Sum_probs=57.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++++.....    ..    ..    .++.+.+.      ..|+|+-+
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~----~~l~ell~------~aDiVil~  205 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YK----DSVKEAIK------DADIISLH  205 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----cc----CCHHHHHh------cCCEEEEe
Confidence            67789999999999999999999999 999999876543211    00    10    12222221      47888888


Q ss_pred             cCChh-----hHHHHHHhcccCCeEEEEEccC
Q 017201          270 TGVPS-----LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g~~~-----~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ....+     .....+..++++ ..++.++..
T Consensus       206 lP~t~~t~~li~~~~l~~mk~g-avlIN~aRG  236 (330)
T PRK12480        206 VPANKESYHLFDKAMFDHVKKG-AILVNAARG  236 (330)
T ss_pred             CCCcHHHHHHHhHHHHhcCCCC-cEEEEcCCc
Confidence            76442     123456677776 777777633

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.02  E-value=0.23  Score=44.56  Aligned_cols=79  Identities=19%  Similarity=0.144  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |++|...++.....|+ +|+++.++ ++.+.+    .+.+...   ..|-.+  .+.....+.+... .
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999988888888899 88888876 333222    2333221   123332  1233333333221 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|.+.|.
T Consensus        90 g~id~li~~ag~  101 (258)
T PRK06935         90 GKIDILVNNAGT  101 (258)
T ss_pred             CCCCEEEECCCC
Confidence            258999998874

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.02  E-value=0.31  Score=45.17  Aligned_cols=34  Identities=21%  Similarity=0.267  Sum_probs=29.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            5789999988 8999998888888899 89998876

>PRK07985 oxidoreductase; Provisional

Probab=94.00  E-value=0.68  Score=42.57  Aligned_cols=81  Identities=19%  Similarity=0.051  Sum_probs=47.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~--~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~  258 (375)
                      -.+.++||+|+ |++|...++.+...|+ +|+.+.++.  ++.+.+    ++.+...   ..|-.+  .+.+.+.+.+..
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~  123 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAH  123 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHH
Confidence            35679999998 9999988887778899 888876543  222222    2233322   123332  123333333322


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . ..++|+++.+.|.
T Consensus       124 ~~~g~id~lv~~Ag~  138 (294)
T PRK07985        124 KALGGLDIMALVAGK  138 (294)
T ss_pred             HHhCCCCEEEECCCC
Confidence            1 1268999998763

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.97  E-value=0.27  Score=44.62  Aligned_cols=36  Identities=25%  Similarity=0.306  Sum_probs=30.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4678999998 9999988887778898 8999987654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.97  E-value=0.32  Score=43.31  Aligned_cols=79  Identities=18%  Similarity=0.266  Sum_probs=49.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE-E--eCCCCCCcccHHHHHHhhc-CCC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD-F--INPDDEPNKSISELVKGIT-HGM  261 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~~i~~~~-~~~  261 (375)
                      +.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+    .+... +  .|-.+  .+++...+.+.. .-.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence            357999998 9999988888778899 89999998877655432    22221 1  23333  223333232221 112


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|.+.+.
T Consensus        78 ~~d~vi~~a~~   88 (255)
T TIGR01963        78 GLDILVNNAGI   88 (255)
T ss_pred             CCCEEEECCCC
Confidence            58999988863

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR00452 methyltransferase, putative

Probab=93.97  E-value=0.23  Score=46.13  Aligned_cols=99  Identities=16%  Similarity=0.185  Sum_probs=61.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH---hhhc-CC---cEEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK---GKAF-GM---TDFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~---~~~l-g~---~~v~~~~~~~~~~~~~~i  254 (375)
                      +.......+|++||-+|+|. |..+..+++. |+..|++++.++.-...   ++++ +.   ..+...      ++    
T Consensus       113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~i----  180 (314)
T TIGR00452       113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------GI----  180 (314)
T ss_pred             HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------CH----
Confidence            34455678899999999975 7666677654 66589999988754332   2222 11   112111      11    


Q ss_pred             HhhcCCCCccEEEEcc-----CCh-hhHHHHHHhcccCCeEEEEE
Q 017201          255 KGITHGMGVDYCFECT-----GVP-SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~-----g~~-~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .++.....||+|+-..     .++ ..+.++.++|+++ |.++..
T Consensus       181 e~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle  224 (314)
T TIGR00452       181 EQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE  224 (314)
T ss_pred             HHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence            1222223699998543     122 4788999999998 998864

Known examples to date are restricted to the proteobacteria.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=93.95  E-value=0.25  Score=44.54  Aligned_cols=80  Identities=21%  Similarity=0.315  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcCC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITHG-  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~-  260 (375)
                      .+.++||+|+ +++|...+..+...|+ +|+.+++++++.+.+    ++.+...   ..|-.+  .+.....+.+.... 
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   85 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence            5678999988 9999987777777899 899988887765433    2334322   123332  12222323222111 


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|++.|.
T Consensus        86 ~~id~li~~ag~   97 (265)
T PRK07097         86 GVIDILVNNAGI   97 (265)
T ss_pred             CCCCEEEECCCC
Confidence            258999999874

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.94  E-value=0.26  Score=46.76  Aligned_cols=36  Identities=31%  Similarity=0.315  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ...+|||+|+|++|..+++.+...|..+++.++.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            457999999999999999999999998999998653

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.92  E-value=0.54  Score=37.20  Aligned_cols=92  Identities=22%  Similarity=0.347  Sum_probs=49.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHH-cCCCeEEEEc-CChh-h--HHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARM-HGAAKIIGID-KNPW-K--KEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~-~G~~~V~~~~-~~~~-~--~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      +|+|+|+ |-+|...++.+.. -+. +++++. ++++ .  .+.-.-.+.  ..+...     .++.    +...  .+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~~l~----~~~~--~~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----DDLE----ELLE--EAD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-HH----HHTT--H-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc-----hhHH----Hhcc--cCC
Confidence            6899999 9999999999987 566 555544 4331 1  111111111  111101     1222    2222  389


Q ss_pred             EEEEccCChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201          265 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       265 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      ++||++. ++.....++.+... |.-+.+|.++.
T Consensus        70 VvIDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG~  101 (124)
T PF01113_consen   70 VVIDFTN-PDAVYDNLEYALKH-GVPLVIGTTGF  101 (124)
T ss_dssp             EEEEES--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred             EEEEcCC-hHHhHHHHHHHHhC-CCCEEEECCCC
Confidence            9999994 44555555555554 67777887764

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.91  E-value=0.52  Score=43.30  Aligned_cols=95  Identities=17%  Similarity=0.215  Sum_probs=66.1

Q ss_pred             ccccchhhhhhhhhhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          170 FLSCGFTTGYGAAWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      .+||+....+. +.+.-++ -.|++|.|+|. +.+|.-.+.++...|+ +|++..+...                     
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------  194 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------  194 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence            45665444444 3344443 57999999998 5999988888888899 8988864322                     


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       +..+.++      ..|+||-++|.+..+...+  ++++ ..++.+|...
T Consensus       195 -~l~e~~~------~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~  234 (301)
T PRK14194        195 -DAKALCR------QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR  234 (301)
T ss_pred             -CHHHHHh------cCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence             1222221      4899999999886666554  8887 8888888553

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=93.91  E-value=0.49  Score=41.78  Aligned_cols=80  Identities=21%  Similarity=0.175  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      ++.++||+|+ |.+|...++.+...|+ .|+...++.++.+.+. .++... +  .|-.+  .+.+.+.+.+... -.++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            4679999998 9999988888878898 8888888777665442 333211 1  22222  1223222222211 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |.+|.+.|.
T Consensus        82 d~vi~~ag~   90 (245)
T PRK12936         82 DILVNNAGI   90 (245)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.88  E-value=0.52  Score=43.29  Aligned_cols=94  Identities=16%  Similarity=0.228  Sum_probs=64.1

Q ss_pred             ccccchhhhhhhhhhhcC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHhhhcCCcEEeCCCCCC
Q 017201          170 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      .+||+....+. +.+.-+ --.|.+|+|+|- +.+|.-.+.++...|+ .|++.. +++                     
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------  193 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------  193 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence            45665444444 334334 368999999995 9999987777778898 888884 322                     


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                        ++.+.++      ..|+|+-++|.+..+...+  ++++ ..++.+|...
T Consensus       194 --~l~e~~~------~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~  233 (296)
T PRK14188        194 --DLPAVCR------RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR  233 (296)
T ss_pred             --CHHHHHh------cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence              1111111      4899999999986665544  8887 8888888653

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.87  E-value=0.34  Score=47.49  Aligned_cols=71  Identities=20%  Similarity=0.276  Sum_probs=48.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh----HHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK----KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~----~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .|.+++|+|+|.+|.++++++...|+ +|++.+.+...    .+.+++.|.........   .+.   +     ..++|+
T Consensus         4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~---~-----~~~~d~   71 (447)
T PRK02472          4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LEL---L-----DEDFDL   71 (447)
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHH---h-----cCcCCE
Confidence            46789999998899999999999999 89999865422    23345567654332222   111   1     114899


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      ||.+.|-
T Consensus        72 vV~s~gi   78 (447)
T PRK02472         72 MVKNPGI   78 (447)
T ss_pred             EEECCCC
Confidence            9988764

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.87  E-value=0.82  Score=44.68  Aligned_cols=87  Identities=16%  Similarity=0.221  Sum_probs=54.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|+|+|+ |.+|.+.+..++..|. +|++.++++++. +.+.++|+...        .+..+.+      ...|+||-|+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv~~~--------~~~~e~~------~~aDvVIlav   66 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGVEYA--------NDNIDAA------KDADIVIISV   66 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCCeec--------cCHHHHh------ccCCEEEEec
Confidence            6899984 9999999898898998 899999888774 55666775311        1122211      1467777777


Q ss_pred             CChh---hHHHHHHhcccCCeEEEEEcc
Q 017201          271 GVPS---LLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       271 g~~~---~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ....   .+......++++ ..++.++.
T Consensus        67 p~~~~~~vl~~l~~~l~~~-~iViDvsS   93 (437)
T PRK08655         67 PINVTEDVIKEVAPHVKEG-SLLMDVTS   93 (437)
T ss_pred             CHHHHHHHHHHHHhhCCCC-CEEEEccc
Confidence            6442   222333344554 55665553

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.87  E-value=0.69  Score=40.59  Aligned_cols=102  Identities=16%  Similarity=0.159  Sum_probs=60.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE---------eCCCCCCcccHHHHHH
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF---------INPDDEPNKSISELVK  255 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v---------~~~~~~~~~~~~~~i~  255 (375)
                      ....++.+||+.|+| .|.-++.||. .|+ +|++++.++.-.+.+. +.+....         ....+  ..-....+.
T Consensus        33 ~~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~  107 (218)
T PRK13255         33 LALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFF  107 (218)
T ss_pred             hCCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECccc
Confidence            345678899999987 4777777775 698 9999999998777642 2222110         00000  000001111


Q ss_pred             hhc--CCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEE
Q 017201          256 GIT--HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       256 ~~~--~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ++.  ....||.|+|...-        ...+....++|+++ |++..+
T Consensus       108 ~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        108 ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence            111  11268999986631        23578889999997 865543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.85  E-value=0.34  Score=49.61  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=58.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ |..+   .+.   +++ .+=..+|.++-+
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~---~~~---L~~-agi~~A~~vvv~  471 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDATR---MDL---LES-AGAAKAEVLINA  471 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCCC---HHH---HHh-cCCCcCCEEEEE
Confidence            3679999999999999999999998 899999999999999998875443 3332   232   222 333378999989


Q ss_pred             cCChh
Q 017201          270 TGVPS  274 (375)
Q Consensus       270 ~g~~~  274 (375)
                      +.+++
T Consensus       472 ~~d~~  476 (621)
T PRK03562        472 IDDPQ  476 (621)
T ss_pred             eCCHH
Confidence            88764

>PRK11579 putative oxidoreductase; Provisional

Probab=93.85  E-value=0.66  Score=43.84  Aligned_cols=128  Identities=16%  Similarity=0.149  Sum_probs=74.7

Q ss_pred             CEEEEECCCHHHH-HHHH-HHHHcCCCeEEEEcC-ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGLGTVGL-GAVD-GARMHGAAKIIGIDK-NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Gag~~G~-~ai~-la~~~G~~~V~~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      =+|.|+|+|.+|. ..+. +.+.-++ +++++.. ++++.  ..+++...++       .++.+.+    ...++|+|+-
T Consensus         5 irvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~--~~~~~~~~~~-------~~~~ell----~~~~vD~V~I   70 (346)
T PRK11579          5 IRVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKV--KADWPTVTVV-------SEPQHLF----NDPNIDLIVI   70 (346)
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHH--HhhCCCCcee-------CCHHHHh----cCCCCCEEEE
Confidence            3789999999986 3444 3444466 7776553 43332  2334322222       2333322    2347999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH---Hh----hcCCceEEEEeeccccCCCCHHHHHHHHHcCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI---AL----ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  341 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (375)
                      ++....+.+.+..++..+  +=|++..+-.    .+..   .+    -.+++.+.-.+  +.+....+..+.+++++|.+
T Consensus        71 ~tp~~~H~~~~~~al~aG--khVl~EKPla----~t~~ea~~l~~~a~~~g~~l~v~~--~~R~~p~~~~~k~~i~~g~i  142 (346)
T PRK11579         71 PTPNDTHFPLAKAALEAG--KHVVVDKPFT----VTLSQARELDALAKSAGRVLSVFH--NRRWDSDFLTLKALLAEGVL  142 (346)
T ss_pred             cCCcHHHHHHHHHHHHCC--CeEEEeCCCC----CCHHHHHHHHHHHHHhCCEEEEEe--eccCCHHHHHHHHHHhcCCC
Confidence            999888889999999874  5566765532    2221   11    12344443222  23334467788888988876

>PRK06523 short chain dehydrogenase; Provisional

Probab=93.84  E-value=0.24  Score=44.36  Aligned_cols=76  Identities=16%  Similarity=0.178  Sum_probs=46.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      +|.++||+|+ |++|...++.+...|+ +|+++++++++..   .-.... ..|-.+  .+...+.+.+... ..++|++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            5789999998 9999988887778899 8999988765421   111111 123322  1222222222211 1269999


Q ss_pred             EEccC
Q 017201          267 FECTG  271 (375)
Q Consensus       267 id~~g  271 (375)
                      |++.|
T Consensus        82 i~~ag   86 (260)
T PRK06523         82 VHVLG   86 (260)
T ss_pred             EECCc
Confidence            99987

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=93.83  E-value=0.84  Score=42.79  Aligned_cols=131  Identities=18%  Similarity=0.242  Sum_probs=80.1

Q ss_pred             EEEEECCCHHH-HHHHHHHHHcC--CCeEEEEcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVG-LGAVDGARMHG--AAKIIGIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G-~~ai~la~~~G--~~~V~~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.++ ...+...+..+  ..-|-++++++++.+ .+++++...++       .++.+.+    ....+|+|+-
T Consensus         5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll----~~~~iD~V~I   73 (342)
T COG0673           5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY-------TDLEELL----ADPDIDAVYI   73 (342)
T ss_pred             EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc-------CCHHHHh----cCCCCCEEEE
Confidence            68899997555 44555555554  334555577888755 45678876332       2233322    2336999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHH------hh-cCCceEEEEeeccccCCCCHHHHHHHHHcCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA------LA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  341 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (375)
                      ++.+..+.+.+...|..  |+=|++..+-    ..++..      +- .+++.+.-.+  +.+....+..+.+++.+|.+
T Consensus        74 atp~~~H~e~~~~AL~a--GkhVl~EKPl----a~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~l  145 (342)
T COG0673          74 ATPNALHAELALAALEA--GKHVLCEKPL----ALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGAL  145 (342)
T ss_pred             cCCChhhHHHHHHHHhc--CCEEEEcCCC----CCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCc
Confidence            99988889999999998  4667776553    222222      22 1233333222  23334567888899998866


Q ss_pred             C
Q 017201          342 K  342 (375)
Q Consensus       342 ~  342 (375)
                      -
T Consensus       146 G  146 (342)
T COG0673         146 G  146 (342)
T ss_pred             C
Confidence            4

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=93.82  E-value=0.78  Score=39.97  Aligned_cols=115  Identities=13%  Similarity=0.058  Sum_probs=66.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .|.+|||+|+|.+|.-=+.+....|+ +|++++..- +....+..-+-...+. +.     +...   ..  .++++||-
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~-----~~~~---~~--~~~~lvia   78 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE-----FDAE---DL--DDAFLVIA   78 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc-----cChh---hh--cCceEEEE
Confidence            57899999999999998889989999 888887654 3332222222211111 11     1111   01  14899999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhh-cCCceEEEE
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA-CGGRTLKGT  318 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~~~  318 (375)
                      +++++..-+...+..++. +.++...... ...++-....+ ...+++.-+
T Consensus        79 At~d~~ln~~i~~~a~~~-~i~vNv~D~p-~~~~f~~Pa~~~r~~l~iaIs  127 (210)
T COG1648          79 ATDDEELNERIAKAARER-RILVNVVDDP-ELCDFIFPAIVDRGPLQIAIS  127 (210)
T ss_pred             eCCCHHHHHHHHHHHHHh-CCceeccCCc-ccCceecceeeccCCeEEEEE
Confidence            999884444555555554 7777665333 22333333333 234554433

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.81  E-value=0.39  Score=42.39  Aligned_cols=80  Identities=20%  Similarity=0.220  Sum_probs=46.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHH----hhhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KEK----GKAFGMTD-FI--NPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~~----~~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++.+++++ .+.    ++..+... .+  |-.+  .+.+.+.+.+... 
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   80 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4578999998 9999998888888899 78776665442 221    22223322 22  3332  1222222222221 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|.+|.+.|.
T Consensus        81 ~~~id~vi~~ag~   93 (248)
T PRK05557         81 FGGVDILVNNAGI   93 (248)
T ss_pred             cCCCCEEEECCCc
Confidence            1268999998874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.81  E-value=0.25  Score=43.80  Aligned_cols=80  Identities=19%  Similarity=0.152  Sum_probs=46.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhH-HHh---hhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKK-EKG---KAFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~-~~~---~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +++++||+|+ |.+|...++.+...|+ +|++.. +++.+. +.+   +..+....   .|-.+  .+++.+.+.+... 
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   78 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999988 9999998888888898 777643 333222 222   23344332   23332  2233333332211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus        79 ~~~id~li~~ag~   91 (246)
T PRK12938         79 VGEIDVLVNNAGI   91 (246)
T ss_pred             hCCCCEEEECCCC
Confidence            1269999999974

>PLN02256 arogenate dehydrogenase

Probab=93.80  E-value=0.93  Score=41.97  Aligned_cols=95  Identities=12%  Similarity=0.217  Sum_probs=59.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      +...--.+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+.. .  .     +..+.+    . ...
T Consensus        29 ~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~--~-----~~~e~~----~-~~a   93 (304)
T PLN02256         29 EELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F--R-----DPDDFC----E-EHP   93 (304)
T ss_pred             HhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e--C-----CHHHHh----h-CCC
Confidence            33444466789999999999988888888887 8999988764 35566677632 1  1     222211    1 147


Q ss_pred             cEEEEccCChhhHHHHHH-----hcccCCeEEEEEcc
Q 017201          264 DYCFECTGVPSLLSEALE-----TTKVGKGKVIVIGV  295 (375)
Q Consensus       264 d~vid~~g~~~~~~~~~~-----~l~~~~G~iv~~g~  295 (375)
                      |+||-|+... .+...+.     .+.++ ..++.++.
T Consensus        94 DvVilavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         94 DVVLLCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             CEEEEecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence            8988888754 3333322     24454 56666654

>PRK05650 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.32  Score=44.00  Aligned_cols=77  Identities=19%  Similarity=0.209  Sum_probs=47.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      +|||+|+ |.+|...++.+...|+ +|+.++++.++.+.+    +..+.+..   .|-.+  .+++.+.+..... ..++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI   78 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            6899988 9999987777777898 899999887765432    22232221   12222  1222222222211 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        79 d~lI~~ag~   87 (270)
T PRK05650         79 DVIVNNAGV   87 (270)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.79  E-value=0.21  Score=45.72  Aligned_cols=44  Identities=25%  Similarity=0.234  Sum_probs=37.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      ..+.++||+|+|+.+.+++.-+...|+.+++++.++.+|.+.+.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            45789999999999998888777899889999999988876553

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.76  E-value=0.32  Score=47.68  Aligned_cols=71  Identities=30%  Similarity=0.363  Sum_probs=48.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhH----HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKK----EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~-~~~----~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      .+++|+|+|+|.+|+.+++.+...|+ +|++++.+. +..    +.+.+.|...+.....    +   ..   .  .++|
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~----~---~~---~--~~~d   70 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVLGEYP----E---EF---L--EGVD   70 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcc----h---hH---h--hcCC
Confidence            47899999998899999999999999 999998764 222    3344556553322211    1   11   1  2689


Q ss_pred             EEEEccCCh
Q 017201          265 YCFECTGVP  273 (375)
Q Consensus       265 ~vid~~g~~  273 (375)
                      +||.+.|..
T Consensus        71 ~vv~~~g~~   79 (450)
T PRK14106         71 LVVVSPGVP   79 (450)
T ss_pred             EEEECCCCC
Confidence            999988753

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=93.74  E-value=0.078  Score=28.30  Aligned_cols=22  Identities=36%  Similarity=0.418  Sum_probs=15.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP   31 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~   31 (375)
                      |||++++++++ ++++++|.|.+
T Consensus         1 MkAv~y~G~~~-v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD-VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE-EEEEEE----S
T ss_pred             CcceEEeCCCc-eEEEECCCccc
Confidence            89999999985 99999998864

>PRK12743 oxidoreductase; Provisional

Probab=93.73  E-value=0.4  Score=42.95  Aligned_cols=79  Identities=10%  Similarity=0.038  Sum_probs=46.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----hhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEK----GKAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~----~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++++||+|+ |.+|...++.+...|+ +|+.+.+ +.++.+.    ++..+... +  .|-.+  .+.....+.+... -
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            468999988 9999998888888899 8877754 4443322    23344322 1  23322  1222222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ..+|++|.+.|.
T Consensus        79 ~~id~li~~ag~   90 (256)
T PRK12743         79 GRIDVLVNNAGA   90 (256)
T ss_pred             CCCCEEEECCCC
Confidence            258999998873

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.71  E-value=0.49  Score=43.79  Aligned_cols=82  Identities=21%  Similarity=0.231  Sum_probs=46.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HhhhcCCcEEeCCCCCC-cccHHHHHHhhcCCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKE----KGKAFGMTDFINPDDEP-NKSISELVKGITHGMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~----~~~~lg~~~v~~~~~~~-~~~~~~~i~~~~~~~g  262 (375)
                      .|.++||+|+ +++|...++.+...|+ +|+.++++. ++.+    .++..|....+..-+.. .+...+.+........
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            5788999988 9999987777777798 888887643 2222    22333433222111111 1222222222111226


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=93.69  E-value=0.42  Score=44.85  Aligned_cols=96  Identities=21%  Similarity=0.262  Sum_probs=62.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-c--EEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-T--DFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .++.+||-+|+|. |..+..+++..+..+|++++.+++-.+.+++... .  .++.      .+..+ + .. ....||+
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~------gD~e~-l-p~-~~~sFDv  181 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE------GDAED-L-PF-PTDYADR  181 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe------ccHHh-C-CC-CCCceeE
Confidence            5788999999875 7777788887754589999998887777665321 1  1111      11211 1 11 1236999


Q ss_pred             EEEccC-----C-hhhHHHHHHhcccCCeEEEEEcc
Q 017201          266 CFECTG-----V-PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       266 vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      |+.+..     . ...+.++.+.|+++ |+++.++.
T Consensus       182 VIs~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        182 YVSAGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             EEEcChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            876432     1 23678899999998 99887753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.68  E-value=0.74  Score=40.87  Aligned_cols=103  Identities=16%  Similarity=0.099  Sum_probs=57.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHH----HhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKE----KGKAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~----~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      +.++||+|+ |.+|...++-....|+ +|+.+.++ .++..    .+++.+... .  .|..+  ..+....+.+... -
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY   82 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence            678999988 9999987777778898 77666543 22221    222333321 1  23322  1222222222211 1


Q ss_pred             CCccEEEEccCCh----------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          261 MGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       261 ~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .++|++|.+.|..          +               ..+.+...++.. |+++.++...
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~  143 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA  143 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence            2689999999731          0               123345555665 8888887543

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=93.68  E-value=0.65  Score=40.95  Aligned_cols=102  Identities=23%  Similarity=0.303  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcCC-------cEEeCCCCCCcccHHHHHH
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGM-------TDFINPDDEPNKSISELVK  255 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg~-------~~v~~~~~~~~~~~~~~i~  255 (375)
                      ......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.       ..++..+.   .+.     
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----  115 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDA---EAL-----  115 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEeccc---ccC-----
Confidence            344566889999999986 888888888875 2399999999888777765321       11221111   011     


Q ss_pred             hhcCCCCccEEEEccC------ChhhHHHHHHhcccCCeEEEEEccC
Q 017201          256 GITHGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .. ....+|+|+-...      ....+..+.++|+++ |.++.+...
T Consensus       116 ~~-~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~  160 (239)
T PRK00216        116 PF-PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS  160 (239)
T ss_pred             CC-CCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence            01 2236899875322      124577889999998 998877543

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=93.65  E-value=0.39  Score=48.99  Aligned_cols=92  Identities=9%  Similarity=0.083  Sum_probs=65.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      ++|+|.|.|.+|+..++..+..|. ++++++.++++.+.+++.|...++ |..+   .+.   + +..+=...|.++-+.
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat~---~~~---L-~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDATQ---LEL---L-RAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeCCC---HHH---H-HhcCCccCCEEEEEe
Confidence            579999999999999999999998 899999999999999998875443 3332   232   2 223333789999999


Q ss_pred             CChhhHH---HHHHhcccCCeEEEE
Q 017201          271 GVPSLLS---EALETTKVGKGKVIV  292 (375)
Q Consensus       271 g~~~~~~---~~~~~l~~~~G~iv~  292 (375)
                      ++++.-.   ...+...|. .+++.
T Consensus       473 ~d~~~n~~i~~~~r~~~p~-~~Iia  496 (601)
T PRK03659        473 NEPEDTMKIVELCQQHFPH-LHILA  496 (601)
T ss_pred             CCHHHHHHHHHHHHHHCCC-CeEEE
Confidence            8864322   233444554 55554

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.61  E-value=0.83  Score=42.80  Aligned_cols=105  Identities=16%  Similarity=0.174  Sum_probs=66.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHh-hhc----CCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKG-KAF----GMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~-~~l----g~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .+...+++|+|+|..+.+.+..+. ..+.++|.+..++++|.+.+ +.+    +.. +...     ++..+.+.      
T Consensus       126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av~------  193 (326)
T TIGR02992       126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAMS------  193 (326)
T ss_pred             CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHhc------
Confidence            345678999999999987766665 57877999999998887644 322    432 2111     12333331      


Q ss_pred             CccEEEEccCChh-hHHHHHHhcccCCeEEEEEccCCCccccchHHH
Q 017201          262 GVDYCFECTGVPS-LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA  307 (375)
Q Consensus       262 g~d~vid~~g~~~-~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~  307 (375)
                      +.|+|+.++++.. .+.  .+.++++ -.+..+|........+++.-
T Consensus       194 ~aDiVvtaT~s~~p~i~--~~~l~~g-~~i~~vg~~~p~~rEld~~~  237 (326)
T TIGR02992       194 GADIIVTTTPSETPILH--AEWLEPG-QHVTAMGSDAEHKNEIDPAV  237 (326)
T ss_pred             cCCEEEEecCCCCcEec--HHHcCCC-cEEEeeCCCCCCceecCHHH
Confidence            6999999997652 222  2357886 77777876543344555444

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=93.59  E-value=1.1  Score=41.79  Aligned_cols=88  Identities=26%  Similarity=0.430  Sum_probs=55.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.++...+. .....+...   .     .++.+-+.      ..|++.-.
T Consensus       141 ~gkTvGIiG~G~IG~~va~~l~afgm-~v~~~d~~~~~~-~~~~~~~~~---~-----~~Ld~lL~------~sDiv~lh  204 (324)
T COG0111         141 AGKTVGIIGLGRIGRAVAKRLKAFGM-KVIGYDPYSPRE-RAGVDGVVG---V-----DSLDELLA------EADILTLH  204 (324)
T ss_pred             cCCEEEEECCCHHHHHHHHHHHhCCC-eEEEECCCCchh-hhcccccee---c-----ccHHHHHh------hCCEEEEc
Confidence            37899999999999999999999999 999999732221 111122111   1     12322222      36887766


Q ss_pred             cCC-hh---hH-HHHHHhcccCCeEEEEEc
Q 017201          270 TGV-PS---LL-SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       270 ~g~-~~---~~-~~~~~~l~~~~G~iv~~g  294 (375)
                      +.. ++   .+ ...+..++++ ..++.++
T Consensus       205 ~PlT~eT~g~i~~~~~a~MK~g-ailIN~a  233 (324)
T COG0111         205 LPLTPETRGLINAEELAKMKPG-AILINAA  233 (324)
T ss_pred             CCCCcchhcccCHHHHhhCCCC-eEEEECC
Confidence            642 21   12 3567777776 7666665

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=93.58  E-value=0.31  Score=37.75  Aligned_cols=93  Identities=24%  Similarity=0.300  Sum_probs=56.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC---cEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM---TDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~---~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      |.+||-.|+| .|...+.+++.. ..++++++.++...++++.    .+.   ..++.      .|+.+....+ ....+
T Consensus         1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~-~~~~~   71 (117)
T PF13659_consen    1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPL-PDGKF   71 (117)
T ss_dssp             TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTC-TTT-E
T ss_pred             CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE------Cchhhchhhc-cCcee
Confidence            5678888764 244555555554 3499999999998887753    332   12221      2443333233 33489


Q ss_pred             cEEEEccCC--------------hhhHHHHHHhcccCCeEEEEE
Q 017201          264 DYCFECTGV--------------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       264 d~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      |+|+-+..-              ...+..+.+.|+++ |.++.+
T Consensus        72 D~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~  114 (117)
T PF13659_consen   72 DLIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI  114 (117)
T ss_dssp             EEEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            999875421              12478899999997 988765

...

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.53  E-value=0.4  Score=42.39  Aligned_cols=79  Identities=20%  Similarity=0.223  Sum_probs=47.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      +.++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+.    ..+... +  .|-.+  .+.+.+.+.+... -
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVEKF   81 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            568999988 9999987777777798 88888 88776654332    222221 1  23222  1222222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (247)
T PRK05565         82 GKIDILVNNAGI   93 (247)
T ss_pred             CCCCEEEECCCc
Confidence            259999998874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.53  E-value=0.43  Score=42.40  Aligned_cols=80  Identities=19%  Similarity=0.134  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----hhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG-IDKNPWKKEK----GKAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~-~~~~~~~~~~----~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+. ..++.++.+.    ++..+... .  .|-.+  .++....+.+... 
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999988 9999988888888898 7665 4556555432    22334322 1  23222  2233333333221 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        80 ~~~id~vi~~ag~   92 (250)
T PRK08063         80 FGRLDVFVNNAAS   92 (250)
T ss_pred             cCCCCEEEECCCC
Confidence            1258999998873

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.51  E-value=0.37  Score=45.93  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=31.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|||+|+|++|..+++.+...|..+++.++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            56789999999999999999999998899999865

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=93.50  E-value=0.26  Score=43.78  Aligned_cols=103  Identities=23%  Similarity=0.351  Sum_probs=62.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHHh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~~  256 (375)
                      +....++|++||=+|+|. |.++..+++..+. .+|++++.+++=++.+++    .+..  ..+..+.   +++     .
T Consensus        41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l-----p  111 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL-----P  111 (233)
T ss_dssp             HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB-------
T ss_pred             hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----c
Confidence            445788999999998863 7788888988752 389999999888777653    2221  1222211   111     1


Q ss_pred             hcCCCCccEEEEccCCh------hhHHHHHHhcccCCeEEEEEccCC
Q 017201          257 ITHGMGVDYCFECTGVP------SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ..+ ..||.|.-+.|-.      ..+.+..+.|+|+ |+++.+....
T Consensus       112 ~~d-~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~  156 (233)
T PF01209_consen  112 FPD-NSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSK  156 (233)
T ss_dssp             S-T-T-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB
T ss_pred             CCC-CceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccC
Confidence            122 3699998776632      4688999999998 9988886543

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=93.49  E-value=1.7  Score=39.32  Aligned_cols=103  Identities=12%  Similarity=0.144  Sum_probs=62.8

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.++    .+|...+.....    +.. .+.. ..
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~----D~~-~~~~-~~  138 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF----DGR-VFGA-AV  138 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC----CHH-Hhhh-hc
Confidence            34678999999888764 555556666553 238999999999987664    456543211111    111 1111 11


Q ss_pred             CCCccEEE-E--ccCC-------------------------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          260 GMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       260 ~~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      + .||.|| |  |+|.                         .+.+..++++++++ |+++....+
T Consensus       139 ~-~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstcs  201 (264)
T TIGR00446       139 P-KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTCS  201 (264)
T ss_pred             c-CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeCC
Confidence            2 599986 3  2332                         12677889999997 988755433

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.47  E-value=0.23  Score=45.84  Aligned_cols=94  Identities=13%  Similarity=0.077  Sum_probs=55.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC-cccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|+|+|+|.+|...+..+...|. +|+.+++++++.+.+++.|...  +..+.. .........+.   ..+|+||-++-
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~---~~~d~vila~k   75 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL---GPQDLVILAVK   75 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc---CCCCEEEEecc
Confidence            68999999999977776667787 8999998888877776655421  100000 00000001111   36899999987


Q ss_pred             ChhhHHHHHHhc----ccCCeEEEEEc
Q 017201          272 VPSLLSEALETT----KVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~~~l----~~~~G~iv~~g  294 (375)
                      .. .+..++..+    .++ ..++.+.
T Consensus        76 ~~-~~~~~~~~l~~~l~~~-~~iv~~~  100 (304)
T PRK06522         76 AY-QLPAALPSLAPLLGPD-TPVLFLQ  100 (304)
T ss_pred             cc-cHHHHHHHHhhhcCCC-CEEEEec
Confidence            55 334444433    343 4565553

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=93.45  E-value=0.79  Score=43.62  Aligned_cols=61  Identities=26%  Similarity=0.309  Sum_probs=44.0

Q ss_pred             CCcccccccccchhhhhhhhhhhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~-~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      ....+|.+..+.+.+- . +.+..+. -.|.+|.|-|-|.+|..+++.+...|+ +|++++.+..
T Consensus       180 ~~r~~aTg~Gv~~~~~-~-a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g  241 (411)
T COG0334         180 LGRSEATGYGVFYAIR-E-ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG  241 (411)
T ss_pred             CCCCcccceehHHHHH-H-HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            3445555555443333 2 2333444 599999999999999999999998899 8999987665

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=93.45  E-value=0.44  Score=42.60  Aligned_cols=80  Identities=16%  Similarity=0.113  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.+|||+|+ +.+|...++.....|+ +|+.++++.++.+.+    +..+.+. +  .|-.+  .++..+.+..... -
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4789999988 9999988888778899 888888877665433    2223221 1  23332  1223232322211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|.+.|.
T Consensus        87 ~~~d~li~~ag~   98 (255)
T PRK06113         87 GKVDILVNNAGG   98 (255)
T ss_pred             CCCCEEEECCCC
Confidence            268999999873

>PRK13984 putative oxidoreductase; Provisional

Probab=93.45  E-value=0.38  Score=49.15  Aligned_cols=78  Identities=22%  Similarity=0.215  Sum_probs=53.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHhhhcCCcEEeCCCCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lg~~~v~~~~~~~  246 (375)
                      .+.+++|+|+|+|+.|+.++..++..|. +|++++..+.                     ..+.++++|++..++..-..
T Consensus       280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~  358 (604)
T PRK13984        280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK  358 (604)
T ss_pred             ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence            5678999999999999999999999999 8888875431                     13455677876554432100


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +... +.+.     ..+|.+|-++|.
T Consensus       359 ~~~~-~~~~-----~~yD~vilAtGa  378 (604)
T PRK13984        359 DIPL-EELR-----EKHDAVFLSTGF  378 (604)
T ss_pred             cCCH-HHHH-----hcCCEEEEEcCc
Confidence            0111 2221     269999999985

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=93.39  E-value=0.94  Score=36.70  Aligned_cols=95  Identities=21%  Similarity=0.147  Sum_probs=62.7

Q ss_pred             ccccchhhhhhhhhhhcC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          170 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      .+|++...... +.+.-+ --.|.+|+|+|- ..+|.-.+.++...|+ .|+.+.++..                     
T Consensus         7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------   63 (140)
T cd05212           7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------   63 (140)
T ss_pred             ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence            34544333333 233334 358999999998 8899988888888898 8888875321                     


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       ++.+.++      ..|+|+-++|.++.+.  -+.++++ ..++.+|...
T Consensus        64 -~l~~~v~------~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~  103 (140)
T cd05212          64 -QLQSKVH------DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK  103 (140)
T ss_pred             -CHHHHHh------hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence             1222222      5899999999875444  3558886 7877776443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.38  E-value=0.84  Score=42.14  Aligned_cols=43  Identities=21%  Similarity=0.302  Sum_probs=34.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.+.
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~   44 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT   44 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence            58899999999866555566788 89999999999888777664

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=93.37  E-value=0.51  Score=43.90  Aligned_cols=39  Identities=18%  Similarity=0.188  Sum_probs=31.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE  229 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~  229 (375)
                      .|.+|||+|+ |.+|...++.+...|+ +|+++.++.++.+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence            4789999998 9999988887777898 8988887765543

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional

Probab=93.34  E-value=0.46  Score=49.04  Aligned_cols=77  Identities=23%  Similarity=0.235  Sum_probs=52.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh---------------------HHHhhhcCCcEEeCCCCCCc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK---------------------KEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~---------------------~~~~~~lg~~~v~~~~~~~~  247 (375)
                      ..+++|+|+|+|+.|+.|+..+...|. +|++++.++.-                     .+.++++|.+..++..-  .
T Consensus       191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v--~  267 (652)
T PRK12814        191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVF--G  267 (652)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcc--c
Confidence            467899999999999999999999998 89999865431                     33455677765554321  0


Q ss_pred             ccH-HHHHHhhcCCCCccEEEEccCCh
Q 017201          248 KSI-SELVKGITHGMGVDYCFECTGVP  273 (375)
Q Consensus       248 ~~~-~~~i~~~~~~~g~d~vid~~g~~  273 (375)
                      .++ .+.+.     ..+|.||-++|..
T Consensus       268 ~dv~~~~~~-----~~~DaVilAtGa~  289 (652)
T PRK12814        268 RDITLEELQ-----KEFDAVLLAVGAQ  289 (652)
T ss_pred             CccCHHHHH-----hhcCEEEEEcCCC
Confidence            111 11121     1489999988864

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.33  E-value=0.37  Score=40.67  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=28.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +|+|+|+|++|...++.+.+.|..+++.++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999888888888997899998764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08223 hypothetical protein; Validated

Probab=93.31  E-value=0.32  Score=44.33  Aligned_cols=36  Identities=31%  Similarity=0.242  Sum_probs=31.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      -...+|||+|+|++|..+++.+.+.|..++..++.+
T Consensus        25 L~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         25 LRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            356899999999999999999999999899998855

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=93.31  E-value=0.64  Score=45.98  Aligned_cols=100  Identities=22%  Similarity=0.273  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc--CCc---EEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF--GMT---DFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l--g~~---~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +...++++++||-+|+|. |..++.+++..|+ +|++++.+++-.+.+++.  +..   .+... +     +..  ..+ 
T Consensus       260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~-d-----~~~--~~~-  328 (475)
T PLN02336        260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVA-D-----CTK--KTY-  328 (475)
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEc-C-----ccc--CCC-
Confidence            344567899999999865 6677788888888 999999998887777542  211   11111 1     110  011 


Q ss_pred             CCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEcc
Q 017201          259 HGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       259 ~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ....||+|+....     . ...+..+.+.|+|+ |+++....
T Consensus       329 ~~~~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~~  370 (475)
T PLN02336        329 PDNSFDVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISDY  370 (475)
T ss_pred             CCCCEEEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            2236999986422     1 24688999999997 99887643

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.29  E-value=1.3  Score=43.20  Aligned_cols=102  Identities=17%  Similarity=0.188  Sum_probs=64.4

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHhh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~~  257 (375)
                      ..++++|++||=.|+|+ |..+.+++..++ ..+|++++.++++++.++    .+|.+.  ++..+.   .++    ...
T Consensus       232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~~  303 (431)
T PRK14903        232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TEY  303 (431)
T ss_pred             HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hhh
Confidence            45788999999988764 555666677662 238999999999988774    456543  222211   111    111


Q ss_pred             cCCCCccEEEE---ccCCh-------------------------hhHHHHHHhcccCCeEEEEEccC
Q 017201          258 THGMGVDYCFE---CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       258 ~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ..+ .||.|+-   |+|..                         +.+..+++.|+++ |.++..-.+
T Consensus       304 ~~~-~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs  368 (431)
T PRK14903        304 VQD-TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT  368 (431)
T ss_pred             hhc-cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence            122 6999863   33321                         1366889999997 987765444

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.29  E-value=0.68  Score=38.31  Aligned_cols=85  Identities=14%  Similarity=0.097  Sum_probs=52.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC------cEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM------TDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~------~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +|.|+|+|..|.+.+..+...|. +|..-.++++..+.+++-+.      ...+...-.-..++.+.++      +.|++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~------~ad~I   73 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE------DADII   73 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT------T-SEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC------cccEE
Confidence            58899999999999999999997 99999999887776654221      1101000000123444442      68999


Q ss_pred             EEccCChhhHHHHHHhccc
Q 017201          267 FECTGVPSLLSEALETTKV  285 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~  285 (375)
                      +-++.+. .+...++.+++
T Consensus        74 iiavPs~-~~~~~~~~l~~   91 (157)
T PF01210_consen   74 IIAVPSQ-AHREVLEQLAP   91 (157)
T ss_dssp             EE-S-GG-GHHHHHHHHTT
T ss_pred             EecccHH-HHHHHHHHHhh
Confidence            9998876 44555555544

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=93.27  E-value=0.97  Score=44.06  Aligned_cols=103  Identities=16%  Similarity=0.231  Sum_probs=63.8

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc-EEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...++++|++||=+|+|+ |..+..+++..+..+|++++.++++.+.++    .+|.. .++..+.   .+.    ....
T Consensus       238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~---~~~----~~~~  309 (427)
T PRK10901        238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA---RDP----AQWW  309 (427)
T ss_pred             HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc---ccc----hhhc
Confidence            345778999999998754 445566666654239999999999887764    34543 2332221   111    1111


Q ss_pred             CCCCccEEE-E--ccCC-------------------------hhhHHHHHHhcccCCeEEEEEcc
Q 017201          259 HGMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       259 ~~~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ....||.|+ |  |++.                         ...+..+.+.|+++ |+++..-.
T Consensus       310 ~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvystc  373 (427)
T PRK10901        310 DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYATC  373 (427)
T ss_pred             ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence            223699986 3  2221                         13577899999998 98876543

>PRK07775 short chain dehydrogenase; Provisional

Probab=93.27  E-value=0.53  Score=42.73  Aligned_cols=80  Identities=15%  Similarity=0.081  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      +..++||+|+ |.+|...++.+...|+ +|++++++.++.+.+    +..+....   .|-.+  .+.+.+.+.+... -
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   85 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhc
Confidence            3468999998 9999988887778898 898888877654432    22343221   13222  1233333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|.+.|.
T Consensus        86 ~~id~vi~~Ag~   97 (274)
T PRK07775         86 GEIEVLVSGAGD   97 (274)
T ss_pred             CCCCEEEECCCc
Confidence            268999999874

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=93.27  E-value=1.2  Score=41.36  Aligned_cols=90  Identities=22%  Similarity=0.269  Sum_probs=60.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ..-.|++|.|+|-|.+|...++.++..|. +|++..+.....+.+...|+.. .        ++.+.++      ..|+|
T Consensus        12 ~~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~v-~--------sl~Eaak------~ADVV   75 (335)
T PRK13403         12 ELLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFEV-M--------SVSEAVR------TAQVV   75 (335)
T ss_pred             hhhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCEE-C--------CHHHHHh------cCCEE
Confidence            44578999999999999999999999999 8988866544445566666632 1        1222222      57999


Q ss_pred             EEccCChhh---H-HHHHHhcccCCeEEEEEc
Q 017201          267 FECTGVPSL---L-SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       267 id~~g~~~~---~-~~~~~~l~~~~G~iv~~g  294 (375)
                      +-+...+..   + ...+..++++  .++.++
T Consensus        76 ~llLPd~~t~~V~~~eil~~MK~G--aiL~f~  105 (335)
T PRK13403         76 QMLLPDEQQAHVYKAEVEENLREG--QMLLFS  105 (335)
T ss_pred             EEeCCChHHHHHHHHHHHhcCCCC--CEEEEC
Confidence            888875432   2 2456666774  444443

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=93.22  E-value=0.59  Score=43.30  Aligned_cols=75  Identities=20%  Similarity=0.288  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH---HhhhcC-Cc---EEeCCCCCCcccHHHHHHhhcCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE---KGKAFG-MT---DFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~---~~~~lg-~~---~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .+..|+|+|| |-+|...+..+...|+ +|.+++|+++..+   .+++|. +.   .++..+=.+...+.+.+.      
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh------
Confidence            6789999999 9999999999999999 8999999987743   466654 21   122111101123444332      


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      |.|.||.+..
T Consensus        78 gcdgVfH~As   87 (327)
T KOG1502|consen   78 GCDGVFHTAS   87 (327)
T ss_pred             CCCEEEEeCc
Confidence            6999998775

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=93.21  E-value=0.54  Score=44.70  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=46.5

Q ss_pred             CCCCEEEEECC-CHHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHhhhcCCcE-Ee--CCCCCC
Q 017201          189 EKGSSVAVLGL-GTVGLG--AVDGARMHGAAKIIGIDKNPW--K--------------KEKGKAFGMTD-FI--NPDDEP  246 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~--ai~la~~~G~~~V~~~~~~~~--~--------------~~~~~~lg~~~-v~--~~~~~~  246 (375)
                      ..|+++||+|+ +++|++  .++.+ ..|+ +|+++....+  +              .+.++++|... .+  |-.+  
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss--  114 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS--  114 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC--
Confidence            45678999988 899988  34444 7898 7777763221  1              22344556432 22  2222  


Q ss_pred             cccHHHHHHhhcCC-CCccEEEEccCCh
Q 017201          247 NKSISELVKGITHG-MGVDYCFECTGVP  273 (375)
Q Consensus       247 ~~~~~~~i~~~~~~-~g~d~vid~~g~~  273 (375)
                      .+...+.+.++... .++|+++++.+.+
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            22333333332221 2699999999876

>PRK03612 spermidine synthase; Provisional

Probab=93.20  E-value=0.72  Score=46.20  Aligned_cols=102  Identities=15%  Similarity=0.141  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-CcE----EeCCCCC--CcccHHHHHHhhcCCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-MTD----FINPDDE--PNKSISELVKGITHGM  261 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-~~~----v~~~~~~--~~~~~~~~i~~~~~~~  261 (375)
                      .+.++||++|+| .|..+..++++-...+|++++.+++-.+.+++.. ...    .++....  ...|..+.+++. . .
T Consensus       296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~-~-~  372 (521)
T PRK03612        296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKL-A-E  372 (521)
T ss_pred             CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhC-C-C
Confidence            567899999886 3666777777655359999999999888887621 000    0110000  012333334332 2 3


Q ss_pred             CccEEEEccCCh-----------hhHHHHHHhcccCCeEEEEEc
Q 017201          262 GVDYCFECTGVP-----------SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       262 g~d~vid~~g~~-----------~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .||+|+-....+           +.++.+.+.|+++ |.++.-.
T Consensus       373 ~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~  415 (521)
T PRK03612        373 KFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS  415 (521)
T ss_pred             CCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence            799986544321           2467888999998 9887654

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=93.19  E-value=0.84  Score=44.76  Aligned_cols=101  Identities=28%  Similarity=0.295  Sum_probs=62.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG  256 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~  256 (375)
                      ......+|++||=+|+|+ |..+..+++.++ ..+|++++.++++.+.++    .+|...  ++..+.   .++      
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da---~~~------  313 (445)
T PRK14904        244 LLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDA---RSF------  313 (445)
T ss_pred             HhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcc---ccc------
Confidence            345678999999998753 434445555442 238999999999987664    456543  222211   111      


Q ss_pred             hcCCCCccEEEE---ccCCh-------------------------hhHHHHHHhcccCCeEEEEEccC
Q 017201          257 ITHGMGVDYCFE---CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       257 ~~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                       .....||.|+-   |+|..                         ..+..+.++++++ |+++..-.+
T Consensus       314 -~~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvystcs  379 (445)
T PRK14904        314 -SPEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPG-GVLVYATCS  379 (445)
T ss_pred             -ccCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence             12236999863   44321                         2477889999997 988876444

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=93.19  E-value=0.93  Score=41.50  Aligned_cols=110  Identities=13%  Similarity=0.074  Sum_probs=70.7

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-C---cE-EeCCCC-CCcccHHHHHHhhcCC
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-M---TD-FINPDD-EPNKSISELVKGITHG  260 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-~---~~-v~~~~~-~~~~~~~~~i~~~~~~  260 (375)
                      ...+..|||+|+ ++.|...+.-+-..|. +|++.+-.++..+.++..- .   .. -+|--+ .......+.+++..+.
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            346667999999 9999988777788899 8999987777765554211 1   11 122211 0112334555666666


Q ss_pred             CCccEEEEccCCh--------------------------hhHHHHHHhcccCCeEEEEEccCCC
Q 017201          261 MGVDYCFECTGVP--------------------------SLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       261 ~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      .+.--+|+++|-.                          ......+.++++..||++.++...+
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G  168 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG  168 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence            6777788888711                          1234456667776799999986654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	375
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		2e-71
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		2e-70
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		8e-66
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-65
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-65
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		3e-65
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-64
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		5e-64
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		1e-62
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-62
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		5e-62
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		6e-62
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-58
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-58
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-57
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		1e-57
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		2e-57
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		3e-57
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		3e-57
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		3e-57
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		4e-57
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		4e-57
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		5e-57
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		6e-57
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		6e-57
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-56
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		1e-56
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-56
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		5e-56
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		8e-56
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		4e-53
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		3e-28
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-17
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		2e-16
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		8e-16
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		5e-14
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-13
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-13
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		4e-13
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		5e-13
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-12
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		4e-12
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		6e-12
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-11
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		2e-11
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		2e-11
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		4e-11
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		8e-11
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		1e-10
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		2e-10
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		2e-10
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-10
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-10
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		1e-09
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-09
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		2e-09
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		2e-09
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		2e-09
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		3e-09
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		5e-09
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		4e-08
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		5e-08
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		8e-08
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		2e-07
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		2e-07
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		4e-06
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		8e-06
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		1e-05
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		1e-05
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		1e-05
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		2e-05
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		7e-05
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		7e-05
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		7e-05
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		2e-04
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		2e-04
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		3e-04
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		4e-04
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		9e-04

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  266 bits (680), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 151/379 (39%), Positives = 211/379 (55%), Gaps = 13/379 (3%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
           +  Q ITCKA V W   +PL +E++QV PP++ EVRVK+LY ++CHTD     G  P  L
Sbjct: 20  TQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGL 79
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN- 119
           +P VLGHE  G+VES G+ V EV+ GD VIP Y  EC+EC+ C S  TNLC K   A   
Sbjct: 80  FPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGV 139
Query: 120 GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
           G+M+ D  SR S+ G+ +YH    ST+S+Y V+    V K+DP         L CG  TG
Sbjct: 140 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTG 199
Query: 179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            GA W  AKVE                     +  GA++IIGID +  K ++ K FG+T+
Sbjct: 200 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTE 259
Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD 298
           FINP  E  + I +++  +T G GVDY FEC G  S++  ALE                 
Sbjct: 260 FINP-KEHEQPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 317
Query: 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
               +  P  ++     GR  KGT FGG K++S +P+L+DK   KE K+ + +TH++ L 
Sbjct: 318 GQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA 373
Query: 355 EIDKAIQLLKQPDCVKVLI 373
           +I+KA  L+   DC++V++
Sbjct: 374 DINKAFDLMHDGDCLRVVL 392

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  262 bits (670), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 149/379 (39%), Positives = 210/379 (55%), Gaps = 13/379 (3%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
           +  Q ITCKA V +   +PL +E++QV PP++ EVR+K+LY ++CHTD     G  P  L
Sbjct: 2   TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL 61
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN- 119
           +P +LGHE  G+VES G+ V EV+ GD VIP Y  EC+EC+ C S  TNLC K   A   
Sbjct: 62  FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 121
Query: 120 GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
           G+M+ D  SR SV G+ +YH    ST+S+Y V+    V K+DP+        L CG  TG
Sbjct: 122 GIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTG 181
Query: 179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            GA W  AKVE                     +  GA++IIGID +  K E  K FG+ +
Sbjct: 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE 241
Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD 298
           F+NP D  +K I E++  +T G GVDY FEC G  S++  ALE                 
Sbjct: 242 FVNPKDH-DKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 299
Query: 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
               +  P  ++     GR  KGT FGG K+++ +P L++K  NKE K+ + +TH++ L 
Sbjct: 300 GQEISTRPFQLVT----GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG 355
Query: 355 EIDKAIQLLKQPDCVKVLI 373
           EI+KA  LL +  C++ ++
Sbjct: 356 EINKAFDLLHEGTCLRCVL 374

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  247 bits (630), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 144/380 (37%), Positives = 207/380 (54%), Gaps = 12/380 (3%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPL 60
           S ++ I CKA V W  G+PL +EEI+V PPK+ EVR+K++  +VCHTD     G  P   
Sbjct: 1   SANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN- 119
           +P +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
           GLM D TSR + +G+ + H    ST+SEY V+    V K+DP         L CG +TGY
Sbjct: 121 GLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 180 GAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
           GAA   AK+E                     ++ GA++IIG+D N  K  + K FG T+ 
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240
Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD- 298
           INP D  +K I E++  +T G GVDY FEC G   ++  ALE                  
Sbjct: 241 INPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG 298
Query: 299 ---AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 355
              A  P  ++     GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +E
Sbjct: 299 EEIATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDE 354
Query: 356 IDKAIQLLKQPDCVKVLITI 375
           I+KA +L+     ++ ++ I
Sbjct: 355 INKAFELMHSGKSIRTVVKI 374

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/381 (38%), Positives = 208/381 (54%), Gaps = 13/381 (3%)
Query: 1   MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAP 59
           M+N + I CKA V W  G+PL +EEI+V PPK+ EVR+K++  +VCHTD     G  P  
Sbjct: 1   MAN-EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG 59
Query: 60  LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
            +P +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +   
Sbjct: 60  CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119
Query: 120 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
            GLM D TSR + +G+ + H    ST+SEY V+    V K+DP         L CG +TG
Sbjct: 120 KGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
           YGAA   AK+E                     ++ GA++IIG+D N  K  + K FG T+
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD 298
            INP D  +K I E++  +T G GVDY FEC G   ++  ALE                 
Sbjct: 240 CINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS 297
Query: 299 ----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 354
               A  P  ++     GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +
Sbjct: 298 GEEIATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD 353
Query: 355 EIDKAIQLLKQPDCVKVLITI 375
           EI+KA +L+     ++ ++ I
Sbjct: 354 EINKAFELMHSGKSIRTVVKI 374

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/378 (37%), Positives = 206/378 (54%), Gaps = 12/378 (3%)
Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYP 62
           ++ I CKA V W  G+PL +EEI+V PPK+ EVR+K++  +VCHTD     G  P   +P
Sbjct: 2   NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61
Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GL 121
            +LGHEG G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GL
Sbjct: 62  VILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121
Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D TSR + +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGA
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 182 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           A   AK+E                     ++ GA++IIG+D N  K  + K FG T+ IN
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD--- 298
           P D  +K I E++  +T G GVDY FEC G   ++  ALE                    
Sbjct: 242 PQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 299
Query: 299 -AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
            A  P  ++     GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+
Sbjct: 300 IATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEIN 355
Query: 358 KAIQLLKQPDCVKVLITI 375
           KA +L+     ++ ++ I
Sbjct: 356 KAFELMHSGKSIRTVVKI 373

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  245 bits (625), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/380 (36%), Positives = 202/380 (53%), Gaps = 11/380 (2%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           +  + I CKA + W  G PL +EEI+V PPK+ EVR++++   VCHTDI  ++     L+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF 61
Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC-----LKYPI 116
           P VLGHE  G+VES G  V   K GD VIP +  +CK C+ C S +TNLC      KYP 
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 117 ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFT 176
               LM D TSR + +G+ +YH    S++S+Y V+    + +VD   +      + CGF+
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFS 181
Query: 177 TGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGM 236
           +GYGAA   AKV                      ++ GA++II ID N  K  K KA G 
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXX 296
           TD +NP  E +K + +++  +T G GVDY  +C G    L  A++ T             
Sbjct: 242 TDCLNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK 299
Query: 297 XDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 355
            D M +P   + L   GR++ GT FGG K+   +P L+   KNK+F L  L+TH +  E 
Sbjct: 300 VDEMTIPTVDVIL---GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFES 356
Query: 356 IDKAIQLLKQPDCVKVLITI 375
           I+ AI L+K+   ++ ++T 
Sbjct: 357 INDAIDLMKEGKSIRTILTF 376

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  243 bits (620), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/378 (37%), Positives = 205/378 (54%), Gaps = 12/378 (3%)
Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYP 62
           ++ I CKA V W  G+PL +EEI+V PPK+ EVR+K++  +VCHTD     G  P   +P
Sbjct: 2   NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61
Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GL 121
            +LGH G G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GL
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121
Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D TSR + +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGA
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181
Query: 182 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           A   AK+E                     ++ GA++IIG+D N  K  + K FG T+ IN
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241
Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD--- 298
           P D  +K I E++  +T G GVDY FEC G   ++  ALE                    
Sbjct: 242 PQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 299
Query: 299 -AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
            A  P  ++     GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+
Sbjct: 300 IATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEIN 355
Query: 358 KAIQLLKQPDCVKVLITI 375
           KA +L+     ++ ++ I
Sbjct: 356 KAFELMHSGKSIRTVVKI 373

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/380 (36%), Positives = 201/380 (52%), Gaps = 11/380 (2%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           +  + I CKA + W  G PL +EEI+V PPK+ EVR++++   VC TDI  ++     L+
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF 61
Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC-----LKYPI 116
           P VLGHE  G+VES G  V   K GD VIP +  +CK C+ C S +TNLC      KYP 
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 117 ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFT 176
               LM D TSR + +G+ +YH    S++S+Y V+    + +VD   +      + CGF+
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFS 181
Query: 177 TGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGM 236
           +GYGAA   AKV                      ++ GA++II ID N  K  K KA G 
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241
Query: 237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXX 296
           TD +NP  E +K + +++  +T G GVDY  +C G    L  A++ T             
Sbjct: 242 TDCLNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK 299
Query: 297 XDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 355
            D M +P   + L   GR++ GT FGG K+   +P L+   KNK+F L  L+TH +  E 
Sbjct: 300 VDEMTIPTVDVIL---GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFES 356
Query: 356 IDKAIQLLKQPDCVKVLITI 375
           I+ AI L+K+   ++ ++T 
Sbjct: 357 INDAIDLMKEGKSIRTILTF 376

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  237 bits (604), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/382 (36%), Positives = 202/382 (52%), Gaps = 16/382 (4%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTD-ILCSEGFPAPL 60
           +  + I CKA + W  G+PL +EE++V PPK+ EVR++++  S+CHTD  +    F    
Sbjct: 4   TKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLA 63
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC-----LKYP 115
           +P ++GHE  G+VES G  V  VK GD VIP Y   C++C+ C S +TNLC     LK P
Sbjct: 64  FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 116 IALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 175
            +   LM D TSR + +G+ +YH F  ST+S+Y V+    + K+D   +      L CGF
Sbjct: 124 ASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGF 183
Query: 176 TTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFG 235
           +TGYGAA   AKV                      +  GA++IIGID N  K  K KA G
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXX 295
            TD +NP D  +K I E++  +T G GVD+  +C G    +  AL+ T            
Sbjct: 244 ATDCLNPRDL-HKPIQEVIIELTKG-GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGV 301
Query: 296 XXDA----MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHV 351
              +    + P  +I     GRT+ GT FGG K+   +P L+   KNK+F L  L+TH +
Sbjct: 302 AAGSKGLTVFPEELII----GRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTL 357
Query: 352 KLEEIDKAIQLLKQPDCVKVLI 373
             ++I +A  L+ Q   ++ ++
Sbjct: 358 PFDKISEAFDLMNQGKSIRTIL 379

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/376 (36%), Positives = 203/376 (53%), Gaps = 11/376 (2%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPR 63
           + I CKA V W   +PL +EEI+V+ P + E+R+K++   VCHTD+    EG     +P 
Sbjct: 5   KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64
Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK-YPIALNGLM 122
           VLGHEG G+VES G  V E + G+ VIP +I +C EC  C S  TN C+K +      +M
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124
Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
               +R + +G+K+      ST+S+Y V++   V K+DPS        L CG +TG+GAA
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAA 184
Query: 183 WKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
              AKVE                        GA +II +D NP K EK K FG TDF+NP
Sbjct: 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 244
Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXX---XXXXXXXXXXXXDA 299
           +D  ++ IS+++  +T+G GVD+  EC G   ++  ALE+                   A
Sbjct: 245 NDH-SEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA 302
Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
             P+ +IA    GRT KG+ FGG K K  +P ++    +K+ KL + +TH + LE ++ A
Sbjct: 303 TRPIQLIA----GRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDA 358
Query: 360 IQLLKQPDCVKVLITI 375
           I L+K   C++ ++++
Sbjct: 359 IDLMKHGKCIRTVLSL 374

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  234 bits (598), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 200/374 (53%), Gaps = 2/374 (0%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           +  + I CKA V W   +P  +EEI+V PPK+ EVR+K+L   +C TD    +G     +
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKF 61
Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
           P ++GHE  G+VES G+ V  VK GD VIP ++ +C+EC  C +   NLC++  I   G+
Sbjct: 62  PVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGV 121
Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           + D T+R + +G+ ++H  + ST++EY V+D + V K+D +  P     + CGF+TGYGA
Sbjct: 122 LADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGA 181
Query: 182 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           A K  KV+                     +  GA++IIGID N  K EK  A G T+ I+
Sbjct: 182 AVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS 241
Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMV 301
           P D   K ISE++  +T G  V Y FE  G    + +AL +                A +
Sbjct: 242 PKDS-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKM 299
Query: 302 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 361
                 L   GRT KG  FGG+K++ D+P L+ +   K+F L QL+TH +  ++I +  +
Sbjct: 300 LTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFE 359
Query: 362 LLKQPDCVKVLITI 375
           LL     ++ ++T 
Sbjct: 360 LLNSGQSIRTVLTF 373

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  234 bits (597), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 131/371 (35%), Positives = 199/371 (53%), Gaps = 2/371 (0%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EEI+V PPK+ EVR+K+L   +C TD    +G     +P +
Sbjct: 5   KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           +GHE  G+VES G+ V  VK GD VIP ++ +C+EC  C +   NLC++  I   G++ D
Sbjct: 65  VGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLAD 124
Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
            T+R + +G+ ++H  + ST++EY V+D + V K+D +  P     + CGF+TGYGAA K
Sbjct: 125 GTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVK 184
Query: 185 EAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
             KV+                     +  GA++IIGID N  K EK  A G T+ I+P D
Sbjct: 185 TGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD 244
Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLN 304
              K ISE++  +T G  V Y FE  G    + +AL +                A +   
Sbjct: 245 S-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTY 302
Query: 305 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 364
              L   GRT KG  FGG+K++ D+P L+ +   K+F L QL+TH +  ++I +  +LL 
Sbjct: 303 DPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLN 362
Query: 365 QPDCVKVLITI 375
               ++ ++T 
Sbjct: 363 SGQSIRTVLTF 373

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/372 (35%), Positives = 191/372 (51%), Gaps = 4/372 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+ A +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
            GHE  G+VES G+ V  V+ GD VIP +I +C +C  C     NLCLK      G M D
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQD 124
Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
            TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A K
Sbjct: 125 GTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVK 184
Query: 185 EAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
            AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP D
Sbjct: 185 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQD 244
Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VPL 303
              K I E++  +++G GVD+ FE  G    +  AL                 D+  + +
Sbjct: 245 Y-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSM 302
Query: 304 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 363
           N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   LL
Sbjct: 303 NPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLL 361
Query: 364 KQPDCVKVLITI 375
           +    ++ ++T 
Sbjct: 362 RSGKSIRTILTF 373

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 192/375 (51%), Gaps = 4/375 (1%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           +  + I CKA V W   +P  +EE++V PPK+ EVR+KM+ A +C +D     G      
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL 61
Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
           P + GHE  G+VES G+ V  V+ GD VIP +I +C +C  C     NLCLK      G 
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGT 121
Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+
Sbjct: 122 MQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGS 181
Query: 182 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +N
Sbjct: 182 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 241
Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM- 300
           P D   K I E++  +++G GVD+ FE  G    +  AL                 D+  
Sbjct: 242 PQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQN 299
Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
           + +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++  
Sbjct: 300 LSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 358
Query: 361 QLLKQPDCVKVLITI 375
            LL+    ++ ++T 
Sbjct: 359 DLLRSGKSIRTILTF 373

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 192/379 (50%), Gaps = 17/379 (4%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +CHTD     G      P +
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLML 123
           LGHE  G+VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
             AKV                      +  GAA+II +D N  K  K K  G T+ INP 
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXX 296
           D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+             
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 297 XDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
            + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 303 INPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKI 355
Query: 357 DKAIQLLKQPDCVKVLITI 375
           ++   LL     ++ ++T 
Sbjct: 356 NEGFDLLHSGKSIRTVLTF 374

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  219 bits (557), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  219 bits (557), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  219 bits (557), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  218 bits (556), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  218 bits (556), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  +  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  218 bits (555), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  218 bits (554), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/379 (35%), Positives = 193/379 (50%), Gaps = 17/379 (4%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W L +P  +EE++V PPK+ EVR+KM+ A +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLML 123
           LGHE  G+VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D T R +  G+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV                      +  GAA+II +D N  K  K K  G T+ INP 
Sbjct: 185 KVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXX 296
           D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+             
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLS 302
Query: 297 XDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
            + M+ L        GRT KG  FGG K+K  +P L+     K+F L  L+T+ +  E+I
Sbjct: 303 INPMLLLT-------GRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKI 355
Query: 357 DKAIQLLKQPDCVKVLITI 375
           ++   LL+    ++ ++T 
Sbjct: 356 NEGFDLLRSGKSIRTVLTF 374

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 193/376 (51%), Gaps = 5/376 (1%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           +  + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      
Sbjct: 2   TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL 61
Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 120
           P + GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 180
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 181 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM 300
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+ 
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 301 -VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
            + +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++ 
Sbjct: 300 NLSMNPMLLL-SGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEG 358
Query: 360 IQLLKQPDCVKVLITI 375
             LL+  + ++ ++T 
Sbjct: 359 FDLLRSGESIRTILTF 374

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  217 bits (552), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 191/379 (50%), Gaps = 17/379 (4%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +C TD     G      P +
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLML 123
           LGHE  G+VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
             AKV                      +  GAA+II +D N  K  K K  G T+ INP 
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXX 296
           D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+             
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 297 XDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
            + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 303 INPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKI 355
Query: 357 DKAIQLLKQPDCVKVLITI 375
           ++   LL     ++ ++T 
Sbjct: 356 NEGFDLLHSGKSIRTVLTF 374

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  216 bits (551), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 191/373 (51%), Gaps = 5/373 (1%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP    +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM-VP 302
           D   K I E++  +++G GVD+ FE  G    +  AL                 D+  + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302
Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361
Query: 363 LKQPDCVKVLITI 375
           L+  + ++ ++T 
Sbjct: 362 LRSGESIRTILTF 374

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 191/379 (50%), Gaps = 17/379 (4%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +C TD     G      P +
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLML 123
           LGHE  G+VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
             AKV                      +  GAA+II +D N  K  K K  G T+ INP 
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXX 296
           D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+             
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 297 XDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
            + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 303 INPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKI 355
Query: 357 DKAIQLLKQPDCVKVLITI 375
           ++   LL     ++ ++T 
Sbjct: 356 NEGFDLLHSGKSIRTVLTF 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  214 bits (546), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/379 (34%), Positives = 190/379 (50%), Gaps = 17/379 (4%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +C TD     G      P +
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLML 123
           LGHE  G+VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
             AKV                      +  GAA+II +D N  K  K K  G T+ INP 
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXX 296
           D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+             
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLS 302
Query: 297 XDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
            + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 303 INPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKI 355
Query: 357 DKAIQLLKQPDCVKVLITI 375
           ++   LL     +  ++T 
Sbjct: 356 NEGFDLLHSGKSICTVLTF 374

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  214 bits (544), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 190/377 (50%), Gaps = 17/377 (4%)
Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W L +P  +EE++V PPK+ EVR+KM+   +C TD     G      P +
Sbjct: 5   KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTPLPVI 64
Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLML 123
           LGHE  G+VES G+ V  VK GD VIP  I +C +C  C +  +N CLK  ++   G + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQ 124
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + R + ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 184 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
             AKV                      +  GAA+II +D N  K  K K  G T+ INP 
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 244 DEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXXXXX 296
           D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+             
Sbjct: 245 DY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLS 302
Query: 297 XDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 356
            + M+ L        GRT KG   GG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 303 MNPMLLLT-------GRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKI 355
Query: 357 DKAIQLLKQPDCVKVLI 373
           ++   LL     ++ ++
Sbjct: 356 NEGFDLLHSGKSIRTIL 372

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  204 bits (520), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 191/368 (51%), Gaps = 5/368 (1%)
Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           ITCKA V W   +PL +E I V PPK+ EVR+K+L + +C +D    +      +P +LG
Sbjct: 8   ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILG 67
Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLMLDS 125
           HE VGVVES G  V  VK GD VIP ++ +C  C  C S  +N C K  + A  GLM D 
Sbjct: 68  HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADM 127
Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
           TSR + RG+ +Y++   ST++EY V+    V K+DP   P ++  + CGF TGYGAA   
Sbjct: 128 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA-PLESCLIGCGFATGYGAAVNT 186
Query: 186 AKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           AKV                      +  GA++IIG+  +  K  K    G T+ +NP D 
Sbjct: 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY 246
Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNV 305
            +K I E++   T+G GVDY  EC G    +  AL++T                      
Sbjct: 247 -DKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLD 304
Query: 306 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
             L   GR+LKG+ FGG K + ++  L+D    K+  ++ L++  + L++I+KA +LL  
Sbjct: 305 PLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSS 363
Query: 366 PDCVKVLI 373
              V+ ++
Sbjct: 364 GQGVRSIM 371

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 153/348 (43%), Gaps = 15/348 (4%)
Query: 18  GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC-SEGFPAPLYPRVLGHEGVGVVESA 76
           G   +++ +++  P+  EV VK++   +CHTD++   + +P PL P VLGHEG G++E+ 
Sbjct: 16  GADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL-PAVLGHEGSGIIEAI 74
Query: 77  GDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV----R 132
           G  V E++ GD V+ +Y G C +C  C +     C ++    N    DS    ++    +
Sbjct: 75  GPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEF-FGRNFSGADSEGNHALCTHDQ 132
Query: 133 GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXX 192
           G    H F+ S+++ Y +   N  VKV   +       L CG  TG GA     KV    
Sbjct: 133 GVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPAS 192
Query: 193 XXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD-DEPNKSIS 251
                             ++ GA+ II +D    + E  K  G T  IN    +P  +I 
Sbjct: 193 SFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIK 252
Query: 252 ELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG 311
           E+  G     GV++  E TG P +L + ++                      +V  L  G
Sbjct: 253 EITDG-----GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLG 307
Query: 312 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
           G+T+ G   G    K  +P L+   +  +F   QL+  +   +EI++A
Sbjct: 308 GKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFYA-FDEINQA 354

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 147/368 (39%), Gaps = 40/368 (10%)
Query: 3   NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PL 60
            S A T KA V    G+PL ++E+ +  P   +++V +  + VCHTD+  +EG +P  P 
Sbjct: 20  GSMAKTMKAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPN 79
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALN 119
            P + GHEGVG V + G  VK VKEGD V IP     C  C +C      LC +    LN
Sbjct: 80  PPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQ---LN 136
Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
                  +  SV G           ++EY+V D N+V  +  +ID ++ + + C   T Y
Sbjct: 137 -------TGYSVNG----------GFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVY 179
Query: 180 GAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
               K    +                     R  G   +  +D +  K +  +  G T  
Sbjct: 180 -KGLKVTDTKPGDWVVISGIGGLGHMAVQYARAMG-LNVAAVDIDDRKLDLARRLGATVT 237
Query: 240 INPDD--EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXX 297
           +N     +P   I +   G   G+ V         P    +AL                 
Sbjct: 238 VNAKTVADPAAYIRKETDGGAQGVLVTAV-----SPKAFEQALGMVARGGTVSLNGLPPG 292
Query: 298 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
           D   PL++  +   G T++G+  G   T+ DL   LD   + + K         KLE+I+
Sbjct: 293 D--FPLSIFNMVLNGVTVRGSIVG---TRLDLQESLDFAADGKVK---ATIQTGKLEDIN 344
Query: 358 KAIQLLKQ 365
                ++Q
Sbjct: 345 AIFDDMRQ 352

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 23/175 (13%)
Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVL 65
           T KA V    G PL++EE++V  P   +V VK+  + VCHTD+  +EG +P  P  P + 
Sbjct: 6   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 65
Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHEGVG V + G  V  VKEGD V IP     C  CE+C +    LC             
Sbjct: 66  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES----------Q 115
Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
             +  SV G           ++EY++ D NYV  +  +++ ++ + + C   T Y
Sbjct: 116 QNTGYSVNG----------GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVY 160

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVLGH 67
           KA V    G PL ++E+ V  P   +V+VK+  + VCHTD+  ++G +P  P  P + GH
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGH 63
Query: 68  EGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           EGVG V + G  V  VKEGD V +P     C  CE+C      LC K             
Sbjct: 64  EGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK----------QQN 113
Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYV 156
           +  SV G           + EY+V D NYV
Sbjct: 114 TGYSVNG----------GYGEYVVADPNYV 133

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 150/381 (39%), Gaps = 32/381 (8%)
Query: 6   AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRV 64
            +   A+V     +PL  +E ++       + V++L A VC +D+    G  P    P +
Sbjct: 15  GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 74
Query: 65  LGHEGVGVVESAGDEVKEV-----KEGDIVIPTYIGECKECENC-TSEMTNLCLKYPI-A 117
           LGHEG G V     E +++     K GD+++      C EC  C  S+   LC    +  
Sbjct: 75  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 134
Query: 118 LNGLMLDSTSRMSVRGQKLY-HIFSCSTWSEYMVIDANY-VVKVDPSIDPSDASFLSCGF 175
           +N            RG   Y H+  C  +S ++V+D    V+KV    D    +   C  
Sbjct: 135 IN------------RGCSEYPHLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSG 180
Query: 176 TTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFG 235
            T Y A  +  +                       R  GA  +I I  +P + +  +  G
Sbjct: 181 ATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG 240
Query: 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXX 295
               +N  +   +   + +  ITHG G D+  E TG    L E  E              
Sbjct: 241 ADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVA 300
Query: 296 XXDAMVPLNVIALACGGRTLKGTTFGGI---KTKSDLPTLLDKCKNKEFKLHQLLTHHVK 352
                VP  V         LK  TF GI    T   + T+    +N +  L +L+TH + 
Sbjct: 301 VPQDPVPFKVYEWL----VLKNATFKGIWVSDTSHFVKTVSITSRNYQL-LSKLITHRLP 355
Query: 353 LEEIDKAIQLLKQPDCVKVLI 373
           L+E +KA++L++  + +KV++
Sbjct: 356 LKEANKALELMESREALKVIL 376

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVLGH 67
           KA V     EPLK++E++       EV V++    VCHTD+  + G +P  P  P + GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 68  EGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           EGVG+VE  G  V  +K GD V IP     C  C+ C S    LC               
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH----------QKN 111
Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           +  SV G           ++EY    A+YVVK+  ++   +A+ + C   T Y A
Sbjct: 112 AGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA 156

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVLGH 67
           KA V     EPLK++E++       EV V++    VCHTD+  + G +P  P  P + GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 68  EGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           EGVG+VE  G  V  +K GD V IP     C  C+ C S    LC               
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH----------QKN 111
Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           +  SV G           ++EY    A+YVVK+  ++   +A+ + C   T Y A
Sbjct: 112 AGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA 156

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 134/359 (37%), Gaps = 37/359 (10%)
Query: 21  LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRVLGHEGVGVVESAGDE 79
           L + E ++  P + EVRVK+  A +C +D     G  P   YPRV+GHE  GV+++ G+ 
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 80  VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 139
           V+  + G+ V    +  C  C  C+    N+C    +A+ G+  D               
Sbjct: 92  VESARVGERVAVDPVVSCGHCYPCSIGKPNVCTT--LAVLGVHAD--------------- 134
Query: 140 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXX 199
                +SEY V+ A    K+  ++    A  +   FT            E          
Sbjct: 135 ---GGFSEYAVVPAKNAWKIPEAVADQYAVMIEP-FTIAANVTGHGQPTENDTVLVYGAG 190
Query: 200 XXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP-NKSISELVKGIT 258
                       ++    +I  D+   + EK K  G    IN    P  +S +E  KGI 
Sbjct: 191 PIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAE--KGIK 248
Query: 259 HGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGT 318
             + +D        PS+L EA+                     P  VI     G+ L  +
Sbjct: 249 PTLIIDAACH----PSILKEAVTLASPAARIVLMGFSSE----PSEVIQQGITGKEL--S 298
Query: 319 TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL--LKQPDCVKVLITI 375
            F      +  P ++D       K  +L+TH    + +  AI L  L Q  C KVL+T 
Sbjct: 299 IFSSRLNANKFPVVIDWLSKGLIKPEKLITHTFDFQHVADAISLFELDQKHCCKVLLTF 357

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 98/248 (39%), Gaps = 27/248 (10%)
Query: 25  EIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK 84
           E ++   K  E  + M Y  VCHTD+  + G        VLGHEG+G+V+  G +V  ++
Sbjct: 18  EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGTVLGHEGIGIVKEIGADVSSLQ 77
Query: 85  EGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCS 143
            GD V   +  E C  CE C S     C +             +  SV G          
Sbjct: 78  VGDRVSVAWFFEGCGHCEYCVSGNETFCREV----------KNAGYSVDG---------- 117
Query: 144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXX 203
             +E  ++ A+Y VKV   +DP +AS ++C   T Y  A K + V+              
Sbjct: 118 GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY-KAIKVSGVKPGDWQVIFGAGGLG 176
Query: 204 XXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD-EPNKSISELVKGITHGMG 262
                  +    AK+I +D N  K    K  G    IN  D  P   I    K IT G+G
Sbjct: 177 NLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEI----KKITGGLG 232
Query: 263 VDYCFECT 270
           V     C 
Sbjct: 233 VQSAIVCA 240

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 98/248 (39%), Gaps = 27/248 (10%)
Query: 25  EIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK 84
           E ++   K  E  + M Y  VCHTD+  + G        VLGHEG+G+V+  G +V  ++
Sbjct: 18  EKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQ 77
Query: 85  EGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCS 143
            GD V   +  E C  CE C S     C +             +  SV G          
Sbjct: 78  VGDRVSVAWFFEGCGHCEYCVSGNETFCREV----------KNAGYSVDG---------- 117
Query: 144 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXX 203
             +E  ++ A+Y VKV   +DP +AS ++C   T Y  A K + V+              
Sbjct: 118 GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY-KAIKVSGVKPGDWQVIFGAGGLG 176
Query: 204 XXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD-EPNKSISELVKGITHGMG 262
                  +    AK+I +D N  K    K  G    IN  D  P   I    K IT G+G
Sbjct: 177 NLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEI----KKITGGLG 232
Query: 263 VDYCFECT 270
           V     C 
Sbjct: 233 VQSAIVCA 240

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 151/365 (41%), Gaps = 35/365 (9%)
Query: 22  KVEEIQVEPP--KSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGD 78
           K+  I+ E P   S +  V+ L  S C +DI    EG        +LGHE VG V   G 
Sbjct: 11  KLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGS 70
Query: 79  EVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
           EVK+ K GD +++P    + +  E        +   +P   NG++          G K  
Sbjct: 71  EVKDFKPGDRVIVPCTTPDWRSLE--------VQAGFPQHSNGML---------AGWKFS 113
Query: 138 HIFSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXX 195
           + F    + EY  V DA+  + + P   P  +A  ++   TTG+  A + A ++      
Sbjct: 114 N-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVV 171
Query: 196 XXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK 255
                          ++ GA +IIG+   P   E  K +G TD +N     N  I + V 
Sbjct: 172 VIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVM 228
Query: 256 GITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GR 313
            +T+G GVD      G    LS+A+                    + +  +   CG   +
Sbjct: 229 KLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 314 TLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVK 370
           T+KG    G + ++++  L D        L +L+TH +   + I++A+ L+K    D +K
Sbjct: 289 TIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIK 346
Query: 371 VLITI 375
            ++ +
Sbjct: 347 AVVIL 351

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 22/229 (9%)
Query: 35  EVRVKMLYASVCHTDILCSE---GFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-I 90
           +VR K+LY  VCH+D+   +   GF   +YP V GHE VG V   G +VK+V  GD V +
Sbjct: 43  DVRFKVLYCGVCHSDLHSIKNDWGFS--MYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGV 100
Query: 91  PTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMV 150
              +G C  CE+C +++ N C K  +    +  D T              +   +S +MV
Sbjct: 101 GCLVGACHSCESCANDLENYCPKMILTYASIYHDGT-------------ITYGGYSNHMV 147
Query: 151 IDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXX 210
            +  Y+++   ++     + L C   T Y         E                     
Sbjct: 148 ANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFA 207
Query: 211 RMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGI 257
           +  G +K+  I  +P KKE+  K FG   F ++ D E  ++ +  + GI
Sbjct: 208 KAFG-SKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGI 255

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 35/365 (9%)
Query: 22  KVEEIQVEPP--KSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGD 78
           K+  I+ E P   S +  V+ L  S C +DI    EG        +LGHE VG V   G 
Sbjct: 11  KLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGS 70
Query: 79  EVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
           EVK+ K GD +++P    + +  E        +   +    NG++          G K  
Sbjct: 71  EVKDFKPGDRVIVPCTTPDWRSLE--------VQAGFQQHSNGML---------AGWKFS 113
Query: 138 HIFSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXX 195
           + F    + EY  V DA+  + + P   P  +A  ++   TTG+  A + A +E      
Sbjct: 114 N-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIELGATVA 171
Query: 196 XXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK 255
                          ++ GA +II +   P   +  K +G TD +N  D P   I   + 
Sbjct: 172 VLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGP---IESQIM 228
Query: 256 GITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GR 313
            +T G GVD      G   +++ A++                  ++P+  +   CG   +
Sbjct: 229 NLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHK 288
Query: 314 TLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVK 370
           T+KG    G + ++++  L D        L +L+TH +   + I++A+ L+K    D +K
Sbjct: 289 TIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIK 346
Query: 371 VLITI 375
            ++ +
Sbjct: 347 AVVIL 351

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 18/188 (9%)
Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVL 65
           +  K    +   E  K  +         +V + +LYA +CH+DI  +   +   +YP + 
Sbjct: 3   VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIP 62
Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGL--M 122
           GHE  G+++  G  VK+ K GD+V +  ++  CK C+ C       C K     + L   
Sbjct: 63  GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSF 122
Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
            D+   M               +S  +V+D NYV+ VD +      + L C   T Y + 
Sbjct: 123 HDNEPHM-------------GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTY-SP 168
Query: 183 WKEAKVEK 190
            K +KV K
Sbjct: 169 LKFSKVTK 176

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 150/365 (41%), Gaps = 35/365 (9%)
Query: 22  KVEEIQVEPP--KSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGD 78
           K+  I+ E P   S +  V+ L  S C +DI    EG        +LGHE VG V   G 
Sbjct: 11  KLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGS 70
Query: 79  EVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
           EVK+ K GD +++P    + +  E        +   +    NG++          G K  
Sbjct: 71  EVKDFKPGDRVIVPCTTPDWRSLE--------VQAGFQQHSNGML---------AGWKFS 113
Query: 138 HIFSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXX 195
           + F    + EY  V DA+  + + P   P  +A  ++   TTG+  A + A +E      
Sbjct: 114 N-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVV 171
Query: 196 XXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK 255
                          ++ GA +IIG+   P   E  K +G TD +N     N  I + V 
Sbjct: 172 VIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIEDQVM 228
Query: 256 GITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GR 313
            +T+G GVD      G    LS+A++                   + +  +   CG   +
Sbjct: 229 KLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 314 TLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVK 370
           T+KG    G + +++   L D        L +L+TH +   + I++A+ L+K    D +K
Sbjct: 289 TIKGGLCPGGRLRAE--RLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIK 346
Query: 371 VLITI 375
            ++ +
Sbjct: 347 AVVIL 351

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 150/365 (41%), Gaps = 35/365 (9%)
Query: 22  KVEEIQVEPP--KSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGD 78
           K+  I+ E P   S +  V+ L  S C +DI    EG        +LGHE VG V   G 
Sbjct: 11  KLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGS 70
Query: 79  EVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
           EVK+ K GD +++P    + +  E        +   +    NG++          G K  
Sbjct: 71  EVKDFKPGDRVIVPCTTPDWRSLE--------VQAGFQQHSNGML---------AGWKFS 113
Query: 138 HIFSCSTWSEYM-VIDANYVVKVDPSIDP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXX 195
           + F    + EY  V DA+  + + P   P  +A  ++   TTG+  A + A ++      
Sbjct: 114 N-FKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVV 171
Query: 196 XXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK 255
                          ++ GA +IIG+   P   E  K +G TD +N     N  I + V 
Sbjct: 172 VIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVM 228
Query: 256 GITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GR 313
            +T+G GVD      G    LS+A+                    + +  +   CG   +
Sbjct: 229 KLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHK 288
Query: 314 TLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVK 370
           T+KG    G + ++++  L D        L +L+TH +   + I++A+ L+K    D +K
Sbjct: 289 TIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIK 346
Query: 371 VLITI 375
            ++ +
Sbjct: 347 AVVIL 351

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 120/332 (36%), Gaps = 33/332 (9%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHE 68
           KAV  +   +PL+  +I    P   +V++++ Y  VCH+D+      +   +YP V GHE
Sbjct: 24  KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 83
Query: 69  GVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
            VG V + GD+V++   GD+V +   +  CK CE C   + N C       N    D   
Sbjct: 84  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPG 143
Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV-DPSIDPSDASFLSCGFTTGYG--AAWK 184
                        +   +S+ +V+   YV+++  P    +  + L C   T Y     W+
Sbjct: 144 H------------TLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQ 191
Query: 185 EAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
               +K                      H    ++    +  K+E  KA G  + +N   
Sbjct: 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAH----VVAFTTSEAKREAAKALGADEVVN--- 244
Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLN 304
             +++  E+     H    D+       P  L +                       P  
Sbjct: 245 --SRNADEMA---AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSP-E 298
Query: 305 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKC 336
           V  L    R + G+  GGI    +   +LD C
Sbjct: 299 VFNLIMKRRAIAGSMIGGIPETQE---MLDFC 327

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/353 (23%), Positives = 144/353 (40%), Gaps = 31/353 (8%)
Query: 31  PKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD-I 88
           P   +  V+ L  + C +DI    EG     +  +LGHE VG V   G EVK+ K GD +
Sbjct: 22  PGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRV 81
Query: 89  VIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY 148
           V+P    + +     TSE+     ++    +G ML         G K  ++        +
Sbjct: 82  VVPAITPDWR-----TSEVQRGYHQH----SGGML--------AGWKFSNVKDGVFGEFF 124
Query: 149 MVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXX 207
            V DA+  +   P   P +A+ +     TTG+  A + A +E                  
Sbjct: 125 HVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAV 183
Query: 208 XXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267
              ++ GA +II +   P   +  K +G TD +N  D P   I   +  +T G GVD   
Sbjct: 184 AGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGP---IESQIMNLTEGKGVDAAI 240
Query: 268 ECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKT 325
              G   +++ A++                  ++P+  +   CG   +T+KG    G + 
Sbjct: 241 IAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRL 300
Query: 326 KSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQ--PDCVKVLITI 375
           +  +  L+D    K     +L+TH  +  + I+KA  L+K    D +K ++ +
Sbjct: 301 R--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL 351

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYP--RVL 65
           +AVV    G P  L+V ++ V  P   EVRV++  A++ H D+   +G  +P  P   VL
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61
Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI 116
           G +G GVV++ G  V+    GD V+      C  CE C +   NLC +Y I
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQI 112

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 144/353 (40%), Gaps = 31/353 (8%)
Query: 31  PKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD-I 88
           P   +  V+ L  + C +DI    EG     +  +LGHE VG V   G EVK+ K GD +
Sbjct: 22  PGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRV 81
Query: 89  VIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY 148
           V+P    + +     TSE+     ++    +G ML         G K  ++        +
Sbjct: 82  VVPAITPDWR-----TSEVQRGYHQH----SGGML--------AGWKFSNVKDGVFGEFF 124
Query: 149 MVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXX 207
            V DA+  +   P   P +A+ +     TTG+  A + A +E                  
Sbjct: 125 HVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGI 183
Query: 208 XXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267
              ++ GA +IIG+   P   E  K +G TD +N     N  I + V  +T+G GVD   
Sbjct: 184 AGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVMKLTNGKGVDRVI 240
Query: 268 ECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKT 325
              G    LS+A++                   + +  +   CG   +T+KG    G + 
Sbjct: 241 MAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL 300
Query: 326 KSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQ--PDCVKVLITI 375
           +  +  L+D    K     +L+TH  +  + I+KA  L+K    D +K ++ +
Sbjct: 301 R--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL 351

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 108/272 (39%), Gaps = 36/272 (13%)
Query: 17  LGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL---------YPRVLGH 67
           +G+PLK+E+I +  PK ++V +K+  A VCH+D+   +G    L          P  LGH
Sbjct: 9   IGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGH 68
Query: 68  EGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           E  G +E  GDEV    +GD+V +  + GE   C  C     +LC            DS 
Sbjct: 69  EIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGN-CYYCRIGEEHLC------------DSP 115
Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
             + +     Y        +EY+++    Y+ K+   +   +A+ L+C   T Y A  K 
Sbjct: 116 RWLGINYDGAY--------AEYVLVPHYKYLYKLR-RLSAVEAAPLTCSGVTTYRAVRKA 166
Query: 186 AKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           +                        +    A IIG+D      E  K  G    IN   +
Sbjct: 167 SLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQ 226
Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLS 277
               +SE ++ IT G G D   +       LS
Sbjct: 227 --DPVSE-IRRITQGKGADAVIDLNNSEKTLS 255

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 143/353 (40%), Gaps = 31/353 (8%)
Query: 31  PKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD-I 88
           P   +  V+ L  + C +DI    EG     +  +LGHE VG V   G EVK+ K GD +
Sbjct: 22  PGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRV 81
Query: 89  VIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY 148
           V+P    + +     TSE+     ++    +G ML         G K  ++        +
Sbjct: 82  VVPAITPDWR-----TSEVQRGYHQH----SGGML--------AGWKFSNVKDGVFGEFF 124
Query: 149 MVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXX 207
            V DA+  +   P   P +A+ +     TTG+  A + A ++                  
Sbjct: 125 HVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGI 183
Query: 208 XXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267
              ++ GA +IIG+   P   E  K +G TD +N     N  I + V  +T+G GVD   
Sbjct: 184 AGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN---YKNGHIVDQVMKLTNGKGVDRVI 240
Query: 268 ECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKT 325
              G    LS+A+                    + +  +   CG   +T+KG    G + 
Sbjct: 241 MAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL 300
Query: 326 KSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQ--PDCVKVLITI 375
           +  +  L+D    K     +L+TH  +  + I+KA  L+K    D +K ++ +
Sbjct: 301 R--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL 351

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 143/353 (40%), Gaps = 31/353 (8%)
Query: 31  PKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD-I 88
           P   +  V+ L  + C +DI    EG     +  +LGHE VG V   G EVK+ K GD +
Sbjct: 22  PGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRV 81
Query: 89  VIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEY 148
           V+P    + +     TSE+     ++    +G ML         G K  ++        +
Sbjct: 82  VVPAITPDWR-----TSEVQRGYHQH----SGGML--------AGWKFSNVKDGVFGEFF 124
Query: 149 MVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXX 207
            V DA+  +   P   P +A+ +     TTG+  A + A +E                  
Sbjct: 125 HVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAV 183
Query: 208 XXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF 267
              ++ GA +II +   P   +  K +G TD +N  D P   I   +  +T G GVD   
Sbjct: 184 AGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDGP---IESQIMNLTEGKGVDAAI 240
Query: 268 ECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKT 325
              G   +++ A++                  ++ +  +   CG   +T+KG    G + 
Sbjct: 241 IAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPGGRL 300
Query: 326 KSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQ--PDCVKVLITI 375
           +  +  L+D    K     +L+TH  +  + I+KA  L+K    D +K ++ +
Sbjct: 301 R--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL 351

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 110/279 (39%), Gaps = 36/279 (12%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--------- 60
           +AV    +G+PL ++EI V  PK  +V +K+  A VCH+D+   +G    L         
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALN 119
            P  LGHE  G +E  GDEV    +GD+V +  + GE   C  C     +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN-CYYCRIGEEHLC-------- 112
Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSDASFLSCGFTTG 178
               DS   + +     Y        +EY+++    Y+ K+   ++  +A+ L+C   T 
Sbjct: 113 ----DSPRWLGINFDGAY--------AEYVIVPHYKYMYKLR-RLNAVEAAPLTCSGITT 159
Query: 179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
           Y A  K +                        +    A IIG+D      E  K  G   
Sbjct: 160 YRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY 219
Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS 277
            IN   +    ++E ++ IT   GVD   +       LS
Sbjct: 220 VINASMQ--DPLAE-IRRITESKGVDAVIDLNNSEKTLS 255

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAP---LYPR 63
           +  KA +     EPL +E++ +  P+  EV +++  A VC TD+   +G  A      P 
Sbjct: 2   VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61
Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           +LGHE  G +   G E+ +VK+GD V+         C  C     N+C            
Sbjct: 62  ILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNIC------------ 108
Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
                   + Q +    +   +SEYM++  + ++VK++ S+ P +A+ L+   TT  GA
Sbjct: 109 --------KNQIIPGQTTNGGFSEYMLVKSSRWLVKLN-SLSPVEAAPLADAGTTSMGA 158

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 105/271 (38%), Gaps = 34/271 (12%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--------- 60
           +AV    +G+PL ++EI V  PK  +V +K+  A VCH+D+   +G    L         
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
            P  LGHE  G +E  GDEV    +GD+V    +     C  C     +LC         
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLC--------- 112
Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSDASFLSCGFTTGY 179
              DS   + +             ++EY+++    Y+ K+   ++  +A+ L+C   T Y
Sbjct: 113 ---DSPRWLGINFD--------GAYAEYVIVPHYKYMYKLR-RLNAVEAAPLTCSGITTY 160
Query: 180 GAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
            A  K +                        +    A IIG+D      E  K  G    
Sbjct: 161 RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV 220
Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECT 270
           IN   +    ++E ++ IT   GVD   +  
Sbjct: 221 INASMQ--DPLAE-IRRITESKGVDAVIDLN 248

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPL-YPRVL 65
           T K V+ +     L+ ++I V  PK+ E+ + + Y+ VCHTD+    G +P P+  P V 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYI-GECKECENC 103
           GHEG GVV   G+ VK  K GD     ++ G C  CE C
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYC 103

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 108/272 (39%), Gaps = 36/272 (13%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--------- 60
           +AV    +G+PL ++EI V  PK  +V +K+  A VCH+D+   +G    L         
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALN 119
            P  LGHE  G +E  GDEV    +GD+V +  + GE   C  C     +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN-CYYCRIGEEHLC-------- 112
Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSDASFLSCGFTTG 178
               DS   + +     Y        +EY+++    Y+ K+   ++  +A+ L+C   T 
Sbjct: 113 ----DSPRWLGINFDGAY--------AEYVIVPHYKYMYKLR-RLNAVEAAPLTCSGITT 159
Query: 179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
           Y A  K +                        +    A IIG+D      E  K  G   
Sbjct: 160 YRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY 219
Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECT 270
            IN   +    ++E ++ IT   GVD   +  
Sbjct: 220 VINASMQ--DPLAE-IRRITESKGVDAVIDLN 248

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 110/279 (39%), Gaps = 36/279 (12%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--------- 60
           +AV    +G+PL ++EI V  PK  +V +K+  A VCH+D+   +G    L         
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVK 61
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALN 119
            P  LGHE  G +E  GDEV    +GD+V +  + GE   C  C     +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGN-CYYCRIGEEHLC-------- 112
Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSDASFLSCGFTTG 178
               DS   + +     Y        +EY+++    Y  K+   ++  +A+ L+C   T 
Sbjct: 113 ----DSPRWLGINFDGAY--------AEYVIVPHYKYXYKLR-RLNAVEAAPLTCSGITT 159
Query: 179 YGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
           Y A  K +                        +    A IIG+D      E  K  G   
Sbjct: 160 YRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY 219
Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS 277
            IN   +    ++E ++ IT   GVD   +       LS
Sbjct: 220 VINASMQ--DPLAE-IRRITESKGVDAVIDLNNSEKTLS 255

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 101/269 (37%), Gaps = 28/269 (10%)
Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY----PRVLGHEGVGVVE 74
           EP+ V+ I    P   E+ +K+  A +CH+DI   +  PA  Y    P  LGHEGVG V 
Sbjct: 12  EPVVVD-IPTPTPGPGEILLKVTAAGLCHSDIFVMD-MPAAQYAYGLPLTLGHEGVGTVA 69
Query: 75  SAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQ 134
             G+ V     GD V       C  C  C     N C               +R +  G 
Sbjct: 70  ELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYC---------------TRAADLGI 114
Query: 135 KLYHIFSCSTWSEYMVID-ANYVVKVDPSIDPSDASFLS-CGFTTGYGAAWKEAKVEKXX 192
               + S  + +EYM++D A ++V +   +DP  A+ L+  G T  +  +     +    
Sbjct: 115 TPPGLGSPGSMAEYMIVDSARHLVPIG-DLDPVAAAPLTDAGLTPYHAISRVLPLLGPGS 173
Query: 193 XXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISE 252
                             R   AA++I +D +  +    +  G    +        +I E
Sbjct: 174 TAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRE 233
Query: 253 LVKGITHGMGVDYCFECTGVPSLLSEALE 281
           L    T G G    F+  G  S +  A +
Sbjct: 234 L----TGGQGATAVFDFVGAQSTIDTAQQ 258

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/368 (21%), Positives = 139/368 (37%), Gaps = 49/368 (13%)
Query: 21  LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSE-GFPAPLY---PRVLGHEGVGVVESA 76
           L++E+  +  PK  EV ++M Y  +C +D+   E G  A      P V+GHE  G V   
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 77  GDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL 136
           G  VK +K+GD V       C+ C+ C     NLC                         
Sbjct: 76  GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF-------------------- 115
Query: 137 YHIFSCST------WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 190
                C+T       + Y V  A++  K+  ++   + + L    + G   A + A V+ 
Sbjct: 116 -----CATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLE-PLSVGV-HACRRAGVQL 168
Query: 191 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFG--MTDFINPDDEPNK 248
                               + +GA  ++   ++P + E  K  G  +T  ++P  E   
Sbjct: 169 GTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEES 227
Query: 249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIAL 308
           SI E ++     +  +   +C+G    ++  +  T                 VPL     
Sbjct: 228 SIIERIRSAIGDLP-NVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPL---VN 283
Query: 309 ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP-- 366
           AC       + F   +  +D P  L+   +    + QL+TH  KLE+   A +  ++   
Sbjct: 284 ACAREIDIKSVF---RYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKAD 340
Query: 367 DCVKVLIT 374
           + +KV+I+
Sbjct: 341 NTIKVMIS 348

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 137/369 (37%), Gaps = 54/369 (14%)
Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI------LCSEGFPAPLYPRVLGHEGVGV 72
           E L + +  V  P   E+ V++  AS+C TD+        + G   P  P V GHE  GV
Sbjct: 11  EGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRP--PLVTGHEFSGV 68
Query: 73  VESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 131
           VE+ G  V+  + GD + + ++I  C  C  C +   ++CL   I    L +D       
Sbjct: 69  VEAVGPGVRRPQVGDHVSLESHI-VCHACPACRTGNYHVCLNTQI----LGVDRD----- 118
Query: 132 RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKX 191
                        ++EY+V+ A      +  ++P D  F        +G A         
Sbjct: 119 -----------GGFAEYVVVPAE-----NAWVNPKDLPFEVAAILEPFGNAVHTVYAGSG 162
Query: 192 XXXXXXXXXXX---XXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 248
                                 R  GA  I+  D NP++    + +     +NP +E   
Sbjct: 163 VSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLEE--- 218
Query: 249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIAL 308
            + E+V+ +T G GV+   E +G  + + + L                    +P + I  
Sbjct: 219 DLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILG-------IPSDPIRF 270
Query: 309 ACGGR-TLKGTTFGGIKTKSDLPTLLDKCK---NKEFKLHQLLTHHVKLEEIDKAIQLLK 364
              G   ++G T  GI  +    T +       +    L  LLTH + L    +A  LL 
Sbjct: 271 DLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLA 330
Query: 365 QPDCVKVLI 373
               VKV++
Sbjct: 331 SGQAVKVIL 339

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 133/360 (36%), Gaps = 42/360 (11%)
Query: 25  EIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY----PRVLGHEGVGVVESAGDEV 80
           E+ V  P   EV +K+L  S+C TD+   E           P++ GHE  G V   G  V
Sbjct: 20  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 79
Query: 81  KEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 139
           + ++ GD V + T+I  C +C  C     ++C                    +  K++ +
Sbjct: 80  EGIEVGDYVSVETHI-VCGKCYACRRGQYHVC--------------------QNTKIFGV 118
Query: 140 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXX 199
            +   ++EY V+ A  + K   SI P  A+        G       A             
Sbjct: 119 DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE---PLGNAVDTVLAGPISGKSVLITGA 175
Query: 200 XXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH 259
                      +  GA  +I  + + +++E  K  G    INP +E    + + V  IT 
Sbjct: 176 GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEE---DVVKEVXDITD 232
Query: 260 GMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTT 319
           G GVD   E +G P  L + L+                   +  N + +       K  T
Sbjct: 233 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLII------FKALT 286
Query: 320 FGGIKTK---SDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQPDCVKVLITI 375
             GI  +       T+    ++ +  L  ++TH  K  ++ ++A +L +     KV+  +
Sbjct: 287 IYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 133/360 (36%), Gaps = 42/360 (11%)
Query: 25  EIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY----PRVLGHEGVGVVESAGDEV 80
           E+ V  P   EV +K+L  S+C TD+   E           P++ GHE  G V   G  V
Sbjct: 21  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGV 80
Query: 81  KEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 139
           + ++ GD V + T+I  C +C  C     ++C                    +  K++ +
Sbjct: 81  EGIEVGDYVSVETHI-VCGKCYACRRGQYHVC--------------------QNTKIFGV 119
Query: 140 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXX 199
            +   ++EY V+ A  + K   SI P  A+        G       A             
Sbjct: 120 DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE---PLGNAVDTVLAGPISGKSVLITGA 176
Query: 200 XXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH 259
                      +  GA  +I  + + +++E  K  G    INP +E    + + V  IT 
Sbjct: 177 GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEE---DVVKEVXDITD 233
Query: 260 GMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTT 319
           G GVD   E +G P  L + L+                   +  N + +       K  T
Sbjct: 234 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLII------FKALT 287
Query: 320 FGGIKTK---SDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQPDCVKVLITI 375
             GI  +       T+    ++ +  L  ++TH  K  ++ ++A +L +     KV+  +
Sbjct: 288 IYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 347

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 101/272 (37%), Gaps = 42/272 (15%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHE 68
           KAV    +G  + V  + +  P   ++ VK+    +C TD     G FP+   P  LGHE
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPS-TPPVTLGHE 82
Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
             G+V  AG  V+++  G  +       C  C  C +   NLC                 
Sbjct: 83  FCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLC----------------- 125
Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAWKE 185
              R  +   I     ++EY+++      ++  ++DP   +F   L+C     +G     
Sbjct: 126 ---RNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL---HGVDL-- 177
Query: 186 AKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           + ++                     R+ GA  +I   +   K+   +  G T  ++P   
Sbjct: 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDP--- 234
Query: 246 PNKSISELVKGITHGM-----GVDYCFECTGV 272
              S  ++V+ I   +     GVD   EC GV
Sbjct: 235 ---SAGDVVEAIAGPVGLVPGGVDVVIECAGV 263

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 2   SNSQAITCKAVVCWGLGEPLKVEEI---QVEPPKSTEVRVKMLYASVCHTDILCSEGFPA 58
           ++++    +A+V    G+P KV E+   ++   + ++VRVKML A +  +DI   +G   
Sbjct: 7   ASAEPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG 66
Query: 59  --PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIG 95
             P  P V G+EGV  V + G  V  +K GD VIP   G
Sbjct: 67  LLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG 105

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 3   NSQAITCKAVVCWGLGEPLKVEEI---QVEPPKSTEVRVKMLYASVCHTDILCSEGFPA- 58
            S     +A+V    G+P KV E+   ++   + ++VRVKML A +  +DI   +G    
Sbjct: 21  QSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL 80
Query: 59  -PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIG 95
            P  P V G+EGV  V + G  V  +K GD VIP   G
Sbjct: 81  LPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG 118

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 17 LGEPLKVEEIQVEP----PKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVG 71
          +G P  +E +  EP    P++  VR K +   +   D     G +PAP  P  LG EG G
Sbjct: 10 VGGPEVLEYVDFEPEAPGPQAVVVRNKAI--GLNFIDTYYRSGLYPAPFLPSGLGAEGAG 67
Query: 72 VVESAGDEVKEVKEGDIV 89
          VVE+ GDEV   K GD V
Sbjct: 68 VVEAVGDEVTRFKVGDRV 85

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 108/277 (38%), Gaps = 43/277 (15%)
Query: 9   CKAVVCWGLGEPLKVEEIQVEPPK---STEVRVKMLYASVCHTDILCSEG----FPAPLY 61
            KA       +PL++E+  V+ P+     +V V++  A VCHTD+   +G       P  
Sbjct: 16  LKAARLHEYNKPLRIED--VDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 73
Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVI--PTYI-GECKECENCTSEMTNLCLKYPIAL 118
           P  LGHE VG +E   + V+ +++GD VI  P    G C  C     +M    L++P   
Sbjct: 74  PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLAC-RAGEDMHCENLEFP--- 129
Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS---DASFLSCGF 175
            GL +D                    ++E+M      V+K+   I      + + L+   
Sbjct: 130 -GLNID------------------GGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAG 170
Query: 176 TTGYGAAWKEAK-VEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAF 234
            T Y A  K A+ +                      ++   A +I +D    K +  +  
Sbjct: 171 ITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL 230
Query: 235 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG 271
           G    ++   +P K + EL    T G GV+   +  G
Sbjct: 231 GADHVVDARRDPVKQVMEL----TRGRGVNVAMDFVG 263

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 95/263 (36%), Gaps = 57/263 (21%)
Query: 17  LGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPA---PLYPRVLGHEGV 70
            G P   L+VE   +EP K  EV V+ML   +  +D++   G  A   PL P + G+EGV
Sbjct: 13  FGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPL-PNIPGYEGV 71
Query: 71  GVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 130
           G+VE+ G  V     G  V+P                                       
Sbjct: 72  GIVENVGAFVSRELIGKRVLP--------------------------------------- 92
Query: 131 VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 190
           +RG+         TW EY+   A++VV +  SID   A+ +     T +    +   +++
Sbjct: 93  LRGE--------GTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQR 144
Query: 191 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 250
                                     ++I + +N    E+    G    I+    P   +
Sbjct: 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAP---L 201
Query: 251 SELVKGITHGMGVDYCFECTGVP 273
            E V  +T+G+G D   +  G P
Sbjct: 202 YETVMELTNGIGADAAIDSIGGP 224

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%)
Query: 24  EEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV 83
           E +  E     EVRVK+  + +C +D+       A  YP  LGHE  G +++ G  V ++
Sbjct: 16  ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDL 75
Query: 84  KEGDIVIPTYIGECKECENCTSEMTNLCLKY 114
             GD V    +  C  C  C     + C KY
Sbjct: 76  HPGDAVACVPLLPCFTCPECLKGFYSQCAKY 106

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 13 VCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTD--ILCSE--GFPAPLYPRVLGHE 68
          V  G   P+ +E+ + EP +S E  V+ L   VC TD  ++     GFP      VLGHE
Sbjct: 6  VKRGEDRPVVIEKPRPEP-ESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHE 64
Query: 69 GVGVVESAGDEVKEVKEGDIVIPT 92
           VGVV    D   E++EGDIV+PT
Sbjct: 65 AVGVVVDPND--TELEEGDIVVPT 86

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/356 (19%), Positives = 132/356 (37%), Gaps = 38/356 (10%)
Query: 25  EIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY----PRVLGHEGVGVVESAGDEV 80
           E+ V  P   EV +K+L  S+C TD+   E           P+++GHE  G V   G  V
Sbjct: 21  EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGV 80
Query: 81  KEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI 139
           ++++ GD I + T+I  C +C  C     ++C                    +  K++ +
Sbjct: 81  EDLQVGDYISVETHI-VCGKCYACKHNRYHVC--------------------QNTKIFGV 119
Query: 140 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXX 199
                ++ Y ++ A    K    + P  A+        G       A             
Sbjct: 120 DMDGVFAHYAIVPAKNAWKNPKDMPPEYAALQE---PLGNAVDTVLAGPIAGRSTLITGA 176
Query: 200 XXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-DDEPNKSISELVKGIT 258
                      +  GA  +I  + + ++++  K  G    +NP +++P K     V  IT
Sbjct: 177 GPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDPVK----FVMDIT 232
Query: 259 HGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGT 318
            G GV+   E +G P  L + L+                +  +  N + +    + L+  
Sbjct: 233 DGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIF---KALEVH 289
Query: 319 TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQPDCVKVLI 373
              G        T+    ++ +  L  ++TH  K  ++ ++A +L++     KV+ 
Sbjct: 290 GITGRHLWETWYTVSSLIQSGKLNLDPIITHKYKGFDKFEEAFELMRAGKTGKVVF 345

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 123/325 (37%), Gaps = 36/325 (11%)
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
           +  +LGHE VG +   G  VK +K GD +++P    +  E E+           YP+   
Sbjct: 53  HDMILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRG--------YPMHSG 104
Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFT 176
           G++          G   +  F    +SE   +   DAN  + +   I P DA  LS   T
Sbjct: 105 GML----------GGWKFSNFKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVT 153
Query: 177 TGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGM 236
           TG+  A + A ++                        GA +I  +       +    +G 
Sbjct: 154 TGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA 212
Query: 237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTX--XXXXXXXXXX 294
           TD IN     N  I E +   T G GVD      G     ++A++               
Sbjct: 213 TDIIN---YKNGDIVEQILKATDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLG 269
Query: 295 XXXDAMVPLNVIALACGGRTLK-GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK- 352
              +  +P +   +  G + +  G T GG      L +L+   K       +L+TH  + 
Sbjct: 270 EGDNIDIPRSEWGVGMGHKHIHGGLTPGGRVRMEKLASLISTGK---LDTSKLITHRFEG 326
Query: 353 LEEIDKAIQLLKQ--PDCVKVLITI 375
           LE+++ A+ L+K    D +K ++ I
Sbjct: 327 LEKVEDALMLMKNKPADLIKPVVRI 351

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 18 GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAG 77
          G   K   + +  PK  E+ VK+   SV   D            PRVLG + +GVVES G
Sbjct: 17 GNLFKTFNLDIPEPKVHEILVKIQSISVNPVDT-KQRLMDVSKAPRVLGFDAIGVVESVG 75
Query: 78 DEVKEVKEGDIV 89
          +EV    +GDIV
Sbjct: 76 NEVTMFNQGDIV 87

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 123/325 (37%), Gaps = 36/325 (11%)
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
           +  +LGHE VG +   G  VK +K GD +++P    +  E E+           YP+   
Sbjct: 53  HDMILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRG--------YPMHSG 104
Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFT 176
           G++          G   +  F    +SE   +   DAN  + +   I P DA  LS   T
Sbjct: 105 GML----------GGWKFSNFKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVT 153
Query: 177 TGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGM 236
           TG+  A + A ++                        GA +I  +       +    +G 
Sbjct: 154 TGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA 212
Query: 237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXX 296
           TD IN     N  I E +   T G GVD      G     ++A++               
Sbjct: 213 TDIIN---YKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG 269
Query: 297 XDAMVPL--NVIALACGGRTLK-GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK- 352
               +P+  +   +  G + +  G T GG      L +L+   K       +L+TH  + 
Sbjct: 270 EGDNIPIPRSEWGVGMGHKHIHGGLTPGGRVRMEKLASLISTGK---LDTSKLITHRFEG 326
Query: 353 LEEIDKAIQLLKQ--PDCVKVLITI 375
           LE+++ A+ L+K    D +K ++ I
Sbjct: 327 LEKVEDALMLMKNKPADLIKPVVRI 351

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/284 (22%), Positives = 104/284 (36%), Gaps = 47/284 (16%)
Query: 21  LKVEEIQVEP--PKSTEVRVKMLYASVCHTDILCSEG-------FPAPL-YPRVLGHEGV 70
           ++VEE+  EP   K TE+ +K+    +C +D+  ++        +P    +P  LGHE  
Sbjct: 42  VRVEEVP-EPRIEKPTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFS 100
Query: 71  GVVESAGDEV------KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GVV  AG E       K  + G+ V       C  C  C     N C      LN L  +
Sbjct: 101 GVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCEN----LNELGFN 156
Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYV--VKVDPSIDPSDASFLSCGFTTGYGAA 182
                               ++EY+ +DA Y   ++    +   D  FL+         A
Sbjct: 157 VD----------------GAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVA 200
Query: 183 W-----KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMT 237
           +     +   +                      +  GA+K+I  + +  ++   K  G  
Sbjct: 201 YNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD 260
Query: 238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 281
             I+P  E   +  E V   T+G+G     E TGVP L+   +E
Sbjct: 261 HVIDPTKE---NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIE 301

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVR---------VKMLYASVCHTDILCSEGFPAPL 60
           + VV  G G   KVE  +++ PK  + R         +K++  ++C +D     G     
Sbjct: 4   RGVVYLGSG---KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ 60
Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL 112
              VLGHE  G V   G +V+ ++ GD+V   +   C  C +C    T +CL
Sbjct: 61  VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCL 112

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	375
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-172
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-170
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-170
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-169
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-169
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-142
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-124
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-78
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	6e-72
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-68
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	3e-67
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-67
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	4e-67
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	3e-64
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-63
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-60
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	8e-58
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	4e-56
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-55
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	6e-55
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-53
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-53
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-53
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	9e-53
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	7e-48
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	4e-47
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	8e-42
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	1e-41
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-38
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-36
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	4e-36
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-35
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	4e-34
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-33
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	8e-33
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	3e-32
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-30
3gms_A	340	Putative NADPH:quinone reductase; structural genom	5e-29
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-23
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	4e-23
4eye_A	342	Probable oxidoreductase; structural genomics, niai	6e-23
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	7e-23
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-20
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	4e-20
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-17
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-16
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	6e-15
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-12
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	5e-12
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	9e-07
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	7e-12
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	5e-11
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	7e-11
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	8e-11
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-10
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-10
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	4e-09
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	8e-10
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-07
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	4e-08
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-08
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-07
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	1e-04
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-04
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	6e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  484 bits (1247), Expect = e-172
 Identities = 157/375 (41%), Positives = 222/375 (59%), Gaps = 6/375 (1%)

Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYP 62
           ++ I CKA V W  G+PL +EEI+V PPK+ EVR+K++  +VCHTD     G  P   +P
Sbjct: 2   NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGL 121
            +LGH G G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GL
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D TSR + +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGA
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 181

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           A   AK+E GS  AV GLG VGL  + G ++ GA++IIG+D N  K  + K FG T+ IN
Sbjct: 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 241

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAM 300
           P D  +K I E++  +T G GVDY FEC G   ++  ALE    G G  +V+GV      
Sbjct: 242 PQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 299

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
           +      L   GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+KA 
Sbjct: 300 IATRPFQLVT-GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAF 358

Query: 361 QLLKQPDCVKVLITI 375
           +L+     ++ ++ I
Sbjct: 359 ELMHSGKSIRTVVKI 373

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  478 bits (1233), Expect = e-170
 Identities = 148/375 (39%), Positives = 217/375 (57%), Gaps = 9/375 (2%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA + W  G PL +EEI+V PPK+ EVR++++   VC TDI  ++     L+P V
Sbjct: 5   KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVV 64

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-----PIALN 119
           LGHE  G+VES G  V   K GD VIP +  +CK C+ C S +TNLC K      P    
Sbjct: 65  LGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124

Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
            LM D TSR + +G+ +YH    S++S+Y V+    + +VD   +      + CGF++GY
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGY 184

Query: 180 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
           GAA   AKV  GS+ AV GLG VGL A+ G ++ GA++II ID N  K  K KA G TD 
Sbjct: 185 GAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC 244

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 299
           +NP +  +K + +++  +T G GVDY  +C G    L  A++ T +G G   V+G     
Sbjct: 245 LNPREL-DKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK-VD 301

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
            + +  + +   GR++ GT FGG K+   +P L+   KNK+F L  L+TH +  E I+ A
Sbjct: 302 EMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDA 360

Query: 360 IQLLKQPDCVKVLIT 374
           I L+K+   ++ ++T
Sbjct: 361 IDLMKEGKSIRTILT 375

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  477 bits (1230), Expect = e-170
 Identities = 147/377 (38%), Positives = 219/377 (58%), Gaps = 8/377 (2%)

Query: 1   MSNS-QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAP 59
           M  + + ITCKA V W   +PL +E I V PPK+ EVR+K+L + +C +D    +     
Sbjct: 1   MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS 60

Query: 60  LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-L 118
            +P +LGHE VGVVES G  V  VK GD VIP ++ +C  C  C S  +N C K  +   
Sbjct: 61  KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 178
            GLM D TSR + RG+ +Y++   ST++EY V+    V K+DP   P ++  + CGF TG
Sbjct: 121 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA-PLESCLIGCGFATG 179

Query: 179 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
           YGAA   AKV  GS+ AV GLG VG  A+ G +  GA++IIG+  +  K  K    G T+
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GV 297
            +NP D  +K I E++   T+G GVDY  EC G    +  AL++T  G G  +V+G+   
Sbjct: 240 CLNPKDY-DKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 297

Query: 298 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
           +  +PL+ + L   GR+LKG+ FGG K + ++  L+D    K+  ++ L++  + L++I+
Sbjct: 298 NERLPLDPLLLLT-GRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQIN 355

Query: 358 KAIQLLKQPDCVKVLIT 374
           KA +LL     V+ ++ 
Sbjct: 356 KAFELLSSGQGVRSIMI 372

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  475 bits (1226), Expect = e-169
 Identities = 151/376 (40%), Positives = 220/376 (58%), Gaps = 5/376 (1%)

Query: 2   SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPL 60
           +  + I CKA V W   +PL +EEI+V+ P + E+R+K++   VCHTD+    EG     
Sbjct: 2   TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-N 119
           +P VLGHEG G+VES G  V E + G+ VIP +I +C EC  C S  TN C+K       
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121

Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
            +M    +R + +G+K+      ST+S+Y V++   V K+DPS        L CG +TG+
Sbjct: 122 DVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGF 181

Query: 180 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
           GAA   AKVE GS+ AV GLG VGL AV G    GA +II +D NP K EK K FG TDF
Sbjct: 182 GAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF 241

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 299
           +NP+D  ++ IS+++  +T+G GVD+  EC G   ++  ALE+   G G  +++G     
Sbjct: 242 VNPNDH-SEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH 299

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
            V    I L   GRT KG+ FGG K K  +P ++    +K+ KL + +TH + LE ++ A
Sbjct: 300 DVATRPIQLIA-GRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDA 358

Query: 360 IQLLKQPDCVKVLITI 375
           I L+K   C++ ++++
Sbjct: 359 IDLMKHGKCIRTVLSL 374

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  475 bits (1225), Expect = e-169
 Identities = 141/372 (37%), Positives = 210/372 (56%), Gaps = 5/372 (1%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A 
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAV 184

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           K AKV +GS+ AV GLG VGL  + G +  GAA+IIG+D N  K  K K  G T+ +NP 
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVP 302
           D   K I E++  +++G GVD+ FE  G    +  AL   +   G  +++GV      + 
Sbjct: 245 DY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLS 302

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   L
Sbjct: 303 MNPMLLLS-GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL 361

Query: 363 LKQPDCVKVLIT 374
           L+  + ++ ++T
Sbjct: 362 LRSGESIRTILT 373

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  408 bits (1050), Expect = e-142
 Identities = 107/376 (28%), Positives = 175/376 (46%), Gaps = 11/376 (2%)

Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPR 63
           S+     A V    G   +++ +++  P+  EV VK++   +CHTD++  +       P 
Sbjct: 2   SELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPA 61

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLM 122
           VLGHEG G++E+ G  V E++ GD V+ +Y G C +C  C +     C ++     +G  
Sbjct: 62  VLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD 120

Query: 123 LDSTSRMSVRGQKLY--HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 180
            +    +    Q +   H F+ S+++ Y +   N  VKV   +       L CG  TG G
Sbjct: 121 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAG 180

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
           A     KV   SS    G G VGL A+  A++ GA+ II +D    + E  K  G T  I
Sbjct: 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI 240

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDA 299
           N   +        +K IT G GV++  E TG P +L + ++   +  GK+ V+G   +  
Sbjct: 241 NSKTQD---PVAAIKEITDG-GVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGT 295

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 359
               +V  L  GG+T+ G   G    K  +P L+   +  +F   QL+      +EI++A
Sbjct: 296 TAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVK-FYAFDEINQA 354

Query: 360 IQLLKQPDCVKVLITI 375
               ++   +K +I I
Sbjct: 355 AIDSRKGITLKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  361 bits (930), Expect = e-124
 Identities = 97/381 (25%), Positives = 153/381 (40%), Gaps = 26/381 (6%)

Query: 3   NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLY 61
           +   +   A+V     +PL  +E ++       + V++L A VC +D+    G  P    
Sbjct: 12  HMMGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPL 71

Query: 62  PRVLGHEGVGVVESAGDEVK-----EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI 116
           P +LGHEG G V     E +      +K GD+++      C EC  C             
Sbjct: 72  PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCP--- 128

Query: 117 ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDPSIDPSDASFLSCGF 175
                  +       RG   Y       +S ++V+D    V+KV    D    +   C  
Sbjct: 129 -------NRKVYGINRGCSEYPHLR-GCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSG 180

Query: 176 TTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235
            T Y A  +  +   G +V + G G +GL  V  AR  GA  +I I  +P + +  +  G
Sbjct: 181 ATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG 240

Query: 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 295
               +N  +   +   + +  ITHG G D+  E TG    L E  E  + G G   V GV
Sbjct: 241 ADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGV 299

Query: 296 -GVDAMVPLNVIALACGGRTLKGTTFGGI--KTKSDLPTLLDKCKNKEFKLHQLLTHHVK 352
                 VP  V         LK  TF GI     S     +         L +L+TH + 
Sbjct: 300 AVPQDPVPFKVYE----WLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLP 355

Query: 353 LEEIDKAIQLLKQPDCVKVLI 373
           L+E +KA++L++  + +KV++
Sbjct: 356 LKEANKALELMESREALKVIL 376

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  244 bits (624), Expect = 2e-78
 Identities = 82/360 (22%), Positives = 143/360 (39%), Gaps = 31/360 (8%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL---YPRVLG 66
           KAV    +G    V +I    P   E+ +K+  A +CH+DI   +   A      P  LG
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           HEGVG V   G+ V     GD V       C  C  C     N C               
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYC--------------- 106

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSC-GFTTGYGAAWKE 185
           +R +  G     + S  + +EYM++D+   +     +DP  A+ L+  G T  +  +   
Sbjct: 107 TRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVL 166

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
             +  GS+  V+G+G +G   +   R   AA++I +D +  +    +  G    +     
Sbjct: 167 PLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAG 226

Query: 246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 305
                ++ ++ +T G G    F+  G  S +  A +   V  G + V+G+   A      
Sbjct: 227 A----ADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAH-AKVG 280

Query: 306 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
             +   G ++    +G   T+S+L  ++   +     +H   T    L+E   A + L++
Sbjct: 281 FFMIPFGASVVTPYWG---TRSELMEVVALARAGRLDIH---TETFTLDEGPAAYRRLRE 334

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  227 bits (581), Expect = 6e-72
 Identities = 81/375 (21%), Positives = 150/375 (40%), Gaps = 43/375 (11%)

Query: 1   MSNSQAI-TCKAVVCWGLGEPLKVEEIQV-EPPKSTEVRVKMLYASVCHTDILCSEGF-- 56
            S S  +   KA       +PL++E++         +V V++  A VCHTD+   +G   
Sbjct: 7   FSQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWH 66

Query: 57  --PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY 114
               P  P  LGHE VG +E   + V+ +++GD VI         C  C +     C   
Sbjct: 67  ELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCEN- 125

Query: 115 PIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS---DASFL 171
            +   GL +D        G           ++E+M      V+K+   I      + + L
Sbjct: 126 -LEFPGLNID--------G----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPL 166

Query: 172 SCGFTTGYGAAWK-EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 230
           +    T Y A  K    +  G+ VA++G+G +G  AV   ++   A +I +D    K + 
Sbjct: 167 ADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKL 226

Query: 231 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 290
            +  G    ++   +P     + V  +T G GV+   +  G  + +           G++
Sbjct: 227 AERLGADHVVDARRDP----VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRL 281

Query: 291 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHH 350
           I++G G    +    I +     + +G+  G      +L  L+      + ++       
Sbjct: 282 IIVGYG--GELRFPTIRVISSEVSFEGSLVG---NYVELHELVTLALQGKVRVE---VDI 333

Query: 351 VKLEEIDKAIQLLKQ 365
            KL+EI+  ++ L++
Sbjct: 334 HKLDEINDVLERLEK 348

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  218 bits (557), Expect = 2e-68
 Identities = 90/367 (24%), Positives = 153/367 (41%), Gaps = 43/367 (11%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF---------PAPL 60
           +AV    +G+PL ++EI V  PK  +V +K+  A VCH+D+   +G              
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALN 119
            P  LGHE  G +E  GDEV    +GD+V +  + G    C  C     +LC        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQG-EGNCYYCRIGEEHLCDSP--RWL 118

Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
           G+  D        G           ++EY+++     +     ++  +A+ L+C   T Y
Sbjct: 119 GINFD--------G----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTY 160

Query: 180 GAAWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
            A  ++A ++   ++ V+G  G +G  AV  A+    A IIG+D      E  K  G   
Sbjct: 161 RAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY 219

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
            IN   +        ++ IT   GVD   +       LS   +      GK +++G+   
Sbjct: 220 VINASMQ---DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLF-G 274

Query: 299 AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 358
           A +  +   +        G+  G    +SD   ++     +  K+  ++T  +KLEE ++
Sbjct: 275 ADLHYHAPLITLSEIQFVGSLVG---NQSDFLGIMRLA--EAGKVKPMITKTMKLEEANE 329

Query: 359 AIQLLKQ 365
           AI  L+ 
Sbjct: 330 AIDNLEN 336

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  215 bits (549), Expect = 3e-67
 Identities = 79/365 (21%), Positives = 145/365 (39%), Gaps = 41/365 (11%)

Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL---YPRV 64
             KA +     EPL +E++ +  P+  EV +++  A VC TD+   +G  A      P +
Sbjct: 3   KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPII 62

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           LGHE  G +   G E+ +VK+GD V+         C  C     N+C      + G   +
Sbjct: 63  LGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKN--QIIPGQTTN 119

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA--- 181
                   G           +SEYM++ ++  +    S+ P +A+ L+   TT  GA   
Sbjct: 120 --------G----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQ 161

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
           A           V V G+G + +  +   + +     I+GI ++   ++     G     
Sbjct: 162 ALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVS 221

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 300
              D        L+  +T G+G     +  G         +      G +I++G+    +
Sbjct: 222 EMKD-----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRV 275

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
             L     A   + L G+ +G   + +DL  ++   ++ + K +      V L++I+KA 
Sbjct: 276 -SLEAFDTAVWNKKLLGSNYG---SLNDLEDVVRLSESGKIKPY---IIKVPLDDINKAF 328

Query: 361 QLLKQ 365
             L +
Sbjct: 329 TNLDE 333

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  214 bits (548), Expect = 4e-67
 Identities = 81/374 (21%), Positives = 142/374 (37%), Gaps = 41/374 (10%)

Query: 10  KAVVCWGLGEPLKVEEIQV-EPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHE 68
           K+VV    G  ++V E  + E     EVRVK+  + +C +D+       A  YP  LGHE
Sbjct: 2   KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
             G +++ G  V ++  GD V     +  C  C  C     + C KY     G   D   
Sbjct: 61  FSGYIDAVGSGVDDLHPGDAVACVPLLP-CFTCPECLKGFYSQCAKYDFI--GSRRD--- 114

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAWK 184
                G           ++EY+V+    V  +   +   D +F   ++ G       A+ 
Sbjct: 115 -----G----------GFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL-----HAFH 154

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
            A+  +  +V ++G GT+GL A+  A   GA  +  ID +  K    K+FG     N  +
Sbjct: 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE 214

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD--AMVP 302
               S  ++   +          E  GVP  +  A+E       ++ ++G       +  
Sbjct: 215 M---SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTS 270

Query: 303 LNVIALACGGRTLKGT--TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
                +     T+ G+   +       +  T       ++  L  L+ H    E   +A+
Sbjct: 271 ATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAV 330

Query: 361 QLL-KQPDCVKVLI 373
           + + +     KVL+
Sbjct: 331 RDIARNAMPGKVLL 344

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  215 bits (550), Expect = 4e-67
 Identities = 86/372 (23%), Positives = 145/372 (38%), Gaps = 42/372 (11%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEG 69
           KAV    +G  + V  + +  P   ++ VK+    +C TD     G      P  LGHE 
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTLGHEF 83

Query: 70  VGVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            G+V  AG  V+++  G  I     I  C  C  C +   NLC        G+  D    
Sbjct: 84  CGIVVEAGSAVRDIAPGARITGDPNIS-CGRCPQCQAGRVNLCRNLRAI--GIHRD---- 136

Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAWKE 185
               G           ++EY+++      ++  ++DP   +F   L+C            
Sbjct: 137 ----G----------GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-----HGVDL 177

Query: 186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 245
           + ++ GS+VA+LG G +GL  V  AR+ GA  +I   +   K+   +  G T  ++P   
Sbjct: 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG 237

Query: 246 PNKSISELVKGIT--HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAMVP 302
               + E + G       GVD   EC GV   + ++    K G G V+++GV      V 
Sbjct: 238 ---DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVE 293

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +    +      + G +F             D       ++ ++++  + L+E    I  
Sbjct: 294 IEPFDILFRELRVLG-SFIN---PFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISN 349

Query: 363 LKQPDCVKVLIT 374
                 VKVL+ 
Sbjct: 350 PAAAGEVKVLVI 361

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  208 bits (532), Expect = 1e-64
 Identities = 89/378 (23%), Positives = 146/378 (38%), Gaps = 40/378 (10%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRVLGHE 68
           K      +G+ +   E +   P   +  V+ L  + C +DI    EG     +  +LGHE
Sbjct: 2   KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            VG V   G EVK+ K GD V+   I                                  
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHS----------------- 103

Query: 129 MSVRGQKLYHIFSCS---TWSEYM-VIDANY-VVKVDPSIDPSDASFLSCGFTTGYGAAW 183
               G      FS      + E+  V DA+  +  +   I    A  +    TTG+  A 
Sbjct: 104 ---GGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA- 159

Query: 184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
           + A ++ G +V V+G+G VGL +V GA   GA +I  +       +    +G TD IN  
Sbjct: 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK 219

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV---GVDAM 300
           +     I E +   T G GVD      G     ++A++  K G   +  +     G +  
Sbjct: 220 NG---DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNID 275

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKA 359
           +P +   +  G + + G    G   +  +  L+D    K     +L+TH  +  + I+KA
Sbjct: 276 IPRSEWGVGMGHKHIHGGLCPG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333

Query: 360 IQLL--KQPDCVKVLITI 375
             L+  K  D +K ++ +
Sbjct: 334 FMLMKDKPKDLIKPVVIL 351

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  207 bits (529), Expect = 3e-64
 Identities = 91/377 (24%), Positives = 155/377 (41%), Gaps = 46/377 (12%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL----YPRVL 65
            A++    G   ++ E+ V  P   EV +K+L  S+C TD+   E           P+++
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           GHE  G V   G  V+ ++ GD V      +  C +C  C     ++C    I   G+  
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYVSVETHIV--CGKCYACRRGQYHVCQNTKIF--GVDT 121

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYG 180
           D        G           ++EY V+ A  + K   SI P  A+    L         
Sbjct: 122 D--------G----------VFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV---DT 160

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
                A    G SV + G G +GL  +  A+  GA  +I  + + +++E  K  G    I
Sbjct: 161 V---LAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI 217

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DA 299
           NP +E    + + V  IT G GVD   E +G P  L + L+      G+V ++G+     
Sbjct: 218 NPFEE---DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKV 273

Query: 300 MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDK 358
            +  N + +     T+ G T  G        T+    ++ +  L  ++TH  K  ++ ++
Sbjct: 274 TIDFNNLIIF-KALTIYGIT--GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEE 330

Query: 359 AIQLLKQPDCVKVLITI 375
           A +L++     KV+  +
Sbjct: 331 AFELMRAGKTGKVVFML 347

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  203 bits (520), Expect = 7e-63
 Identities = 89/373 (23%), Positives = 142/373 (38%), Gaps = 44/373 (11%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPL---YPRVL 65
           +A+      E L + +  V  P   E+ V++  AS+C TD+ +      A      P V 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           GHE  GVVE+ G  V+  + GD V      +  C  C  C +   ++CL   I   G+  
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHVSLESHIV--CHACPACRTGNYHVCLNTQIL--GVDR 117

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYG 180
           D        G           ++EY+V+ A         +    A+              
Sbjct: 118 D--------G----------GFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV----- 154

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
                     G SV + G G +GL A    R  GA  I+  D NP++    + +     +
Sbjct: 155 HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLV 213

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 300
           NP +E    + E+V+ +T G GV+   E +G  + + + L     G G+  ++G+  D +
Sbjct: 214 NPLEE---DLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPI 268

Query: 301 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 360
                  L   G T  G    G +             +    L  LLTH + L    +A 
Sbjct: 269 RFDLAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAF 326

Query: 361 QLLKQPDCVKVLI 373
            LL     VKV++
Sbjct: 327 GLLASGQAVKVIL 339

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  199 bits (509), Expect = 1e-60
 Identities = 87/394 (22%), Positives = 144/394 (36%), Gaps = 59/394 (14%)

Query: 10  KAVVCWGLGEPLKVEEIQV-EPPKSTEVRVKMLYASVCHTDILCSEGFP--------APL 60
                W   E ++VEE+      K TE+ +K+    +C +D+  ++              
Sbjct: 32  LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90

Query: 61  YPRVLGHEGVGVVESAGDEV------KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY 114
           +P  LGHE  GVV  AG E       K  + G+ V    +  C  C  C     N C   
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENL 150

Query: 115 PIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---- 170
                G  +D        G           ++EY+ +DA Y   +       +       
Sbjct: 151 NEL--GFNVD--------G----------AFAEYVKVDAKYAWSLRELEGVYEGDRLFLA 190

Query: 171 ------LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224
                  S  +        +   +  G +V +LG G +GL AV   +  GA+K+I  + +
Sbjct: 191 GSLVEPTSVAY---NAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPS 247

Query: 225 PWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 284
             ++   K  G    I+P  E   +  E V   T+G+G     E TGVP L+   +E   
Sbjct: 248 EVRRNLAKELGADHVIDPTKE---NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304

Query: 285 VGK--GKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF 341
                    V  V   DA +PL           + G+   G       P ++    +   
Sbjct: 305 WRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQ--GHSGHGTFPRVISLMASG-M 361

Query: 342 KLHQLLTHHVKLEEIDKAIQLLKQ-PDCVKVLIT 374
            + ++++  V +EEI + I+ L+     VKV + 
Sbjct: 362 DMTKIISKTVSMEEIPEYIKRLQTDKSLVKVTML 395

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  190 bits (486), Expect = 8e-58
 Identities = 83/378 (21%), Positives = 148/378 (39%), Gaps = 53/378 (14%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSE----GFPAPLYPRVL 65
            ++V  G G+ L++E   +  P   EV ++M    +C +D+   E    G      P VL
Sbjct: 9   LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-----IPTYIGECKECENCTSEMTNLCLKYPIALNG 120
           GHE  G VE  G  VK +K GD V      P      +  E C     NL          
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAP-----RENDEFCKMGRYNLSPS------- 115

Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTT 177
                   +                  +   +A +  K+  ++   + +    LS G   
Sbjct: 116 --------IFFCATPPDD----GNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI-- 161

Query: 178 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 237
               A +   V  G  V V G G +G+  +  A+  GAA+++  D +  +  K K  G  
Sbjct: 162 ---HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD 218

Query: 238 DFINPDDEPNKSISELVKGITHGMG--VDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 295
             +    E   S  E+ + +   +G   +   ECTG  + +   +  T+ G G ++++G+
Sbjct: 219 LVLQISKE---SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL 274

Query: 296 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 355
           G + M  + ++  A     +KG  F      +  P  +    +K   +  L+TH   LE+
Sbjct: 275 GSE-MTTVPLLHAAIREVDIKG-VFRY---CNTWPVAISMLASKSVNVKPLVTHRFPLEK 329

Query: 356 IDKAIQLLKQPDCVKVLI 373
             +A +  K+   +K+++
Sbjct: 330 ALEAFETFKKGLGLKIML 347

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  186 bits (474), Expect = 4e-56
 Identities = 90/366 (24%), Positives = 143/366 (39%), Gaps = 40/366 (10%)

Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPL-YPRVL 65
           T K V+ +     L+ ++I V  PK+ E+ + + Y+ VCHTD+    G +P P+  P V 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64

Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHEG GVV   G+ VK  K GD   I    G C  CE C     + C             
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHA---------- 114

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSC-GFTTGYGAAW 183
             S  +  G          ++ +Y   DA     +    D +  + + C G T  Y  A 
Sbjct: 115 DLSGYTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-Y-KAL 162

Query: 184 KEAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 241
           K A +  G  VA+ G    GLG  AV  A+  G  +++GID    K+E  ++ G   FI+
Sbjct: 163 KSANLMAGHWVAISGAAG-GLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSIGGEVFID 220

Query: 242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 301
              E +  I   V   T G G       +   + +  +    +   G  +++G+   A  
Sbjct: 221 FTKEKD--IVGAVLKATDG-GAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKC 276

Query: 302 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 361
             +V        ++ G+  G      D    LD       K        V L  + +  +
Sbjct: 277 CSDVFNQVVKSISIVGSYVGNRA---DTREALDFFARGLVKSP---IKVVGLSTLPEIYE 330

Query: 362 LLKQPD 367
            +++  
Sbjct: 331 KMEKGQ 336

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  185 bits (472), Expect = 1e-55
 Identities = 67/393 (17%), Positives = 124/393 (31%), Gaps = 58/393 (14%)

Query: 10  KAVVCWGLGEPLKVEEIQV-EPPKSTEVRVKMLYASVCHTDI------LCSEGFPAPLYP 62
           KA++       ++V+++   +     +++++ +Y  +C  D       L     P     
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
            VLGHE +GVVE   +      +GD+V+P     C  C NC     + C           
Sbjct: 62  LVLGHEAIGVVE---ESYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCE---------- 108

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF--LSCG------ 174
              T      G             E+   D  Y+VK+  SI+        L+        
Sbjct: 109 ---TGEFGEAGIHKMD----GFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEE 161

Query: 175 ---FTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231
                        +        V V+G G +G+      R +G    +   + P + E+ 
Sbjct: 162 ILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQT 221

Query: 232 KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKV 290
                             + + V         D   + TG   ++L   +       G +
Sbjct: 222 VIEETKTNYYNSSNGYDKLKDSVG------KFDVIIDATGADVNILGNVIPLLGRN-GVL 274

Query: 291 IVIGVGVDAMVPLNVIALA---CGGRTLKGTTFGGIKTKSDLPTLLD----KCKNKEFKL 343
            + G      VPL+   L       +T+ G   G    K      +              
Sbjct: 275 GLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASWKTLYPKAA 331

Query: 344 HQLLTHHVKLEEIDKAIQLL--KQPDCVKVLIT 374
             L+T  V + +  + +++L  K+   +K+ I 
Sbjct: 332 KMLITKTVSINDEKELLKVLREKEHGEIKIRIL 364

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  183 bits (466), Expect = 6e-55
 Identities = 93/363 (25%), Positives = 147/363 (40%), Gaps = 42/363 (11%)

Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVL 65
             KA V    G PL ++E+ V  P   +V+VK+  + VCHTD+  ++G +P  P  P + 
Sbjct: 2   MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIP 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHEGVG V + G  V  VKEGD V +P     C  CE+C      LC K      G  ++
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK--QQNTGYSVN 119

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                   G           + EY+V D NYV  +   +   + + + C   T Y    K
Sbjct: 120 --------G----------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVY-KGLK 160

Query: 185 EAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
                 G  V + G+G  GLG  AV  AR  G  ++  +D +  K    +  G    +N 
Sbjct: 161 VTDTRPGQWVVISGIG--GLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGAEVAVNA 217

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
            D      +  ++    G            P   S+A+   + G G + + G+       
Sbjct: 218 RDTD---PAAWLQKEIGGA--HGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDF-G 270

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
             +  +   G T++G+  G      DL   LD   + + K         KL++++     
Sbjct: 271 TPIFDVVLKGITIRGSIVGTRS---DLQESLDFAAHGDVKAT---VSTAKLDDVNDVFGR 324

Query: 363 LKQ 365
           L++
Sbjct: 325 LRE 327

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  180 bits (458), Expect = 1e-53
 Identities = 86/400 (21%), Positives = 145/400 (36%), Gaps = 68/400 (17%)

Query: 1   MSNSQAITCKAVVC------WGLGEPLKVEEIQVEP-PKSTEVRVKMLYASVCHTDI-LC 52
           M++S + T   V        W       +E +Q     K  EV V +    +C +D+   
Sbjct: 1   MASSASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFW 60

Query: 53  SEGFPAPL---YPRVLGHEGVGVVESAGDEVKEVKEGDIV-----IPTYIGECKECENCT 104
             G   P+      VLGHE  G V +    VK +K GD V     +      C  CE C 
Sbjct: 61  KHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVI-----CNACEPCL 115

Query: 105 SEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID 164
           +   N C +               +                  Y+   A +  K+  ++ 
Sbjct: 116 TGRYNGCER---------------VDFLSTPPVP----GLLRRYVNHPAVWCHKI-GNMS 155

Query: 165 PSDASF---LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI 221
             + +    LS        A  + A V  G  V + G G +GL  +  A+  GA  ++  
Sbjct: 156 YENGAMLEPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVIT 210

Query: 222 DKNPWKKEKGKAFGMTDFINPDDEPN-KSISELVKGITHGMGVDYCFECTGVPSLLSEAL 280
           D +  + +  K        +  +  + +  ++ +     G+      ECTGV S ++ A+
Sbjct: 211 DIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAI 270

Query: 281 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT-----TFGGIKTKSDLPTLLDK 335
              K G GKV VIGVG +  + +  +  +     L+       T+         P  +  
Sbjct: 271 WAVKFG-GKVFVIGVGKN-EIQIPFMRASVREVDLQFQYRYCNTW---------PRAIRL 319

Query: 336 CKNKEFKLHQLLTHHVKLEEIDKAIQLLK--QPDCVKVLI 373
            +N    L +L+TH   LE+  KA +     +   +KV I
Sbjct: 320 VENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQI 359

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  179 bits (457), Expect = 2e-53
 Identities = 86/379 (22%), Positives = 161/379 (42%), Gaps = 48/379 (12%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI----LCSEGFPAPLYPRVL 65
            + V +   + L++E+  +  PK  EV ++M Y  +C +D+               P V+
Sbjct: 6   LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           GHE  G V   G  VK +K+GD V   P     C+ C+ C     NLC            
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLCPD---------- 112

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYG 180
                ++               + Y V  A++  K+  ++   + +    LS G      
Sbjct: 113 -----LTFCATPPDD----GNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV----- 158

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
            A + A V+ G++V V+G G +GL +V  A+ +G A ++   ++P + E  K  G    +
Sbjct: 159 HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAKNCGADVTL 217

Query: 241 NPDDEPNKSISELVKGITHGMG--VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
             D    +  S +++ I   +G   +   +C+G    ++  +  T+ G G ++++G+G  
Sbjct: 218 VVDP-AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQ 275

Query: 299 AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 358
            MV + ++        +K       +  +D P  L+   +    + QL+TH  KLE+   
Sbjct: 276 -MVTVPLVNACAREIDIKSV----FRYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVD 330

Query: 359 AIQLL--KQPDCVKVLITI 375
           A +    K  + +KV+I+ 
Sbjct: 331 AFEAARKKADNTIKVMISC 349

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  178 bits (454), Expect = 4e-53
 Identities = 73/393 (18%), Positives = 133/393 (33%), Gaps = 67/393 (17%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTD--ILCSE--GFPAPLYPRVL 65
           KA+      +   V E     P+S E  V+ L   VC TD  ++     GFP      VL
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIV--IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           GHE VGVV        E++EGDIV             E    +  ++             
Sbjct: 62  GHEAVGVVV--DPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPD---------- 109

Query: 124 DSTSRMSVRGQKLYHI---FSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTT 177
                     + +            SE+      Y+V++  S           +S     
Sbjct: 110 -----GMYFERGIVGAHGYM-----SEFFTSPEKYLVRIPRSQAE-LGFLIEPISITE-- 156

Query: 178 GYGAAWKEAKVEK------GSSVAVLGLGTVGLGAVDGARMH--GAAKIIGI---DKNPW 226
               A + A   +       SS  VLG G++GL  +   ++   G   +  +   D+   
Sbjct: 157 ---KALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDP 213

Query: 227 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 286
             +  +    T +++    P + + ++ +       +D+ +E TG P    ++++     
Sbjct: 214 TIDIIEELDAT-YVDSRQTPVEDVPDVYE------QMDFIYEATGFPKHAIQSVQALAPN 266

Query: 287 KGKVIVIGVGVDAMVPLNVIA----LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 342
            G   ++GV  D    ++  A    +    + L G+    ++        +   K  ++ 
Sbjct: 267 -GVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEH--FEAATVTFTKLPKWF 323

Query: 343 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 375
           L  L+T    L E + A         +K  I  
Sbjct: 324 LEDLVTGVHPLSEFEAAFD--DDDTTIKTAIEF 354

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  177 bits (451), Expect = 9e-53
 Identities = 99/361 (27%), Positives = 149/361 (41%), Gaps = 42/361 (11%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPA-PLYPRVLGH 67
           KA V     EPLK++E++       EV V++    VCHTD+  + G +P  P  P + GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 68  EGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           EGVG+VE  G  V  +K GD V IP     C  C+ C S    LC        G      
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH--QKNAG------ 113

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 186
              SV G           ++EY    A+YVVK+  ++   +A+ + C   T Y  A K  
Sbjct: 114 --YSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY-KALKVT 160

Query: 187 KVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
             + G  VA+ G+G  GLG  AV  A+  G   ++ +D    K E  K  G    +NP  
Sbjct: 161 GAKPGEWVAIYGIG--GLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNPLK 217

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 304
           E     ++ +K      GV               A  + + G G  +++G+  + M P+ 
Sbjct: 218 ED---AAKFMKEKVG--GVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEM-PIP 270

Query: 305 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 364
           +      G  + G+  G  K   DL   L      + K          LE+I++    + 
Sbjct: 271 IFDTVLNGIKIIGSIVGTRK---DLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRML 324

Query: 365 Q 365
           +
Sbjct: 325 K 325

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  166 bits (422), Expect = 7e-48
 Identities = 77/411 (18%), Positives = 130/411 (31%), Gaps = 70/411 (17%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPK--------STEVRVKMLYASVCHTDILCSEGFPAPLY 61
           K+VV  G      +    V  PK           V +K++  ++C +D     G      
Sbjct: 4   KSVVYHG---TRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPK 60

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
             VLGHE  G V   G +V+ +  GD + +P  +  C  C NC    +++C         
Sbjct: 61  GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVA-CGRCRNCKEARSDVCE-------- 111

Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWS------EYMVI---DANYVV---KVDPSIDPSDA 168
                     V        F            EY+++   D   +    K        D 
Sbjct: 112 -------NNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDL 164

Query: 169 SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK 228
           + +S    TG+      A V+ GS V + G G VG  A  GAR+ GAA +I  D+NP + 
Sbjct: 165 TLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL 223

Query: 229 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP--------------S 274
           +     G       +  P   + + +  I     VD   +  G                 
Sbjct: 224 KLLSDAGFETIDLRNSAP---LRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNG 280

Query: 275 LLSEALETTKVGKGKVIVIGV-------GVDAMVPLNVIALACGGRTLKGTTFGGIKT-- 325
            L+   +  + G G + + G+        V+       + L  G    K           
Sbjct: 281 ALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV 339

Query: 326 KSDLPTLLDKCKNKEFKLH--QLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 374
            +    L +     +       +    + L++         +    K +I 
Sbjct: 340 TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVID 390

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  163 bits (416), Expect = 4e-47
 Identities = 94/408 (23%), Positives = 153/408 (37%), Gaps = 64/408 (15%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPK---------STEVRVKMLYASVCHTDILCSEGFPAPL 60
           + VV  G     KVE  +++ PK            V +K++  ++C +D     G     
Sbjct: 4   RGVVYLG---SGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ 60

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
              VLGHE  G V   G +V+ ++ GD + +P  +  C  C +C    T +CL    A  
Sbjct: 61  VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVA-CGRCRSCKEMHTGVCLTVNPARA 119

Query: 120 GLMLDSTSRMSVRG-QKLYHIFSCSTWSEY-MVIDANY-VVKVDPSIDPSDAS-----FL 171
           G            G Q           +EY +V  A++ ++K+ P  D +         L
Sbjct: 120 GGAYGYVDMGDWTGGQ-----------AEYVLVPYADFNLLKL-PDRDKAMEKIRDLTCL 167

Query: 172 SCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231
           S    TGY  A   A V  GS+V V G G VGL A   AR+ GAA +I  D NP +    
Sbjct: 168 SDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHA 226

Query: 232 KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---------------SLL 276
           KA G        D P   + E +  +     VD   +  G                 ++L
Sbjct: 227 KAQGFEIADLSLDTP---LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 283

Query: 277 SEALETTKVGKGKVIVIGV-------GVDAMVPLNVIALACGGRTLKGTTFGG--IKTKS 327
           +  ++ T+V  GK+ + G+        VDA   +  +++  G    K  +F         
Sbjct: 284 NSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMK 342

Query: 328 DLPTLLDKCKNKEFKLHQLL-THHVKLEEIDKAIQLLKQPDCVKVLIT 374
               L+         + +++    + L++  +           K +I 
Sbjct: 343 YNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVID 390

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  148 bits (377), Expect = 8e-42
 Identities = 74/395 (18%), Positives = 129/395 (32%), Gaps = 78/395 (19%)

Query: 2   SNSQAITCKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG--- 55
             S     +A+V    G+P   ++++ +++   + ++VRVKML A +  +DI   +G   
Sbjct: 20  FQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG 79

Query: 56  FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP 115
               L P V G+EGV  V + G  V  +K GD VIP   G                    
Sbjct: 80  LLPEL-PAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG-------------------- 118

Query: 116 IALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 175
               G                       TW    V     +++V   I    A+ L    
Sbjct: 119 ---LG-----------------------TWRTEAVFSEEALIQVPSDIPLQSAATLGVNP 152

Query: 176 TTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI----DKNPWKKEK 230
            T Y       +++ G SV        VG   +  A   G  + I +           ++
Sbjct: 153 CTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKLSDR 211

Query: 231 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 290
            K+ G    I  ++       E+               C G  S  +E L     G G +
Sbjct: 212 LKSLGAEHVITEEELRRP---EMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTM 266

Query: 291 IVIGV--GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSD-------LPTLLDKCKNKEF 341
           +  G       +  ++++        L+G      K           + TL D  +  + 
Sbjct: 267 VTYGGMAKQPVVASVSLLIF--KDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQL 324

Query: 342 KLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 375
                    V L++   A++   +P    K ++T+
Sbjct: 325 TAP--ACSQVPLQDYQSALEASMKPFISSKQILTM 357

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  148 bits (375), Expect = 1e-41
 Identities = 90/372 (24%), Positives = 156/372 (41%), Gaps = 37/372 (9%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRVL 65
           +AVV    G P  L+V ++ V  P   EVRV++  A++ H D+   +G   P    P VL
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           G +G GVV++ G  V+    GD V+      C  CE C +   NLC +Y I   G     
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQIL--GEHRH- 118

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
                  G          T++EY+V+    +     ++   +A+ +   F T +     +
Sbjct: 119 -------G----------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDK 161

Query: 186 AKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
             V  G  V V+     V + A+  A++ G A++I    +  K  + KA G  + +N   
Sbjct: 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKALGADETVNYTH 220

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 304
                  + V+ +T G G D   + TG        ++ T  G G++ + G        L 
Sbjct: 221 P---DWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAIAGASSGYEGTLP 275

Query: 305 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 364
              +     ++ G+T     +KS L  +L   +    KL  ++   + LE   +  +LL+
Sbjct: 276 FAHVFYRQLSILGSTMA---SKSRLFPILRFVEEG--KLKPVVGQVLPLEAAAEGHRLLE 330

Query: 365 QPDCV-KVLITI 375
           +     KV++ +
Sbjct: 331 ERRVFGKVVLQV 342

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  139 bits (353), Expect = 3e-38
 Identities = 83/363 (22%), Positives = 138/363 (38%), Gaps = 41/363 (11%)

Query: 8   TCKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRV 64
             +      +    LK+ E  V      ++ V+ L  S+ + D L  E        +P V
Sbjct: 27  WMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFV 86

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
              +  GVVE+ G  V   + GD VI T+     +     +  T        A  G    
Sbjct: 87  PASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPG---- 142

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                                SEY+V+   + V    S+D ++AS L C   T + A  +
Sbjct: 143 -------------------VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVE 183

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
           +  +  G  V V G G V L  +  A+  G A++I    +  K ++  A G    IN  +
Sbjct: 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFALGADHGINRLE 242

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVP 302
           E      E V  +T   G D+  E  G  + L ++L+      G++ VIGV  G +   P
Sbjct: 243 E---DWVERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPD-GRISVIGVLEGFEVSGP 297

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 362
           +  + L      ++G + G  +   DL   +D        L  ++    K  E+ +A+  
Sbjct: 298 VGPLLL--KSPVVQGISVGHRRALEDLVGAVD-----RLGLKPVIDMRYKFTEVPEALAH 350

Query: 363 LKQ 365
           L +
Sbjct: 351 LDR 353

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  134 bits (340), Expect = 2e-36
 Identities = 76/329 (23%), Positives = 131/329 (39%), Gaps = 30/329 (9%)

Query: 1   MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAP 59
           +     +  KAV  +   +PL+  +I    P   +V++++ Y  VCH+D+      +   
Sbjct: 15  LYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT 74

Query: 60  LYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIAL 118
           +YP V GHE VG V + GD+V++   GD+V +   +  CK CE C   + N C       
Sbjct: 75  VYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTY 134

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTT 177
           N    D                +   +S+ +V+   YV+++    +     + L C   T
Sbjct: 135 NSPTPDEPGH------------TLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGIT 182

Query: 178 GYGAAWKEAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235
            Y +  +  +   G  V V+G+G  GLG   +  A   G A ++    +  K+E  KA G
Sbjct: 183 TY-SPLRHWQAGPGKKVGVVGIG--GLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKALG 238

Query: 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 295
             + +N  +       + +    H    D+       P  L +     K   G + ++G 
Sbjct: 239 ADEVVNSRNA------DEMA--AHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGA 289

Query: 296 GVDAMVPLNVIALACGGRTLKGTTFGGIK 324
                    V  L    R + G+  GGI 
Sbjct: 290 PATPHKSPEVFNLIMKRRAIAGSMIGGIP 318

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  135 bits (342), Expect = 4e-36
 Identities = 65/401 (16%), Positives = 133/401 (33%), Gaps = 67/401 (16%)

Query: 4   SQAITCKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPA-- 58
                  A +     +P   + ++++ V      E  V ++ +SV +  +  S   P   
Sbjct: 38  KDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLST 97

Query: 59  -----------------PLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECE 101
                             L   V+G +  GVV   G  V   + GD V+   +    E  
Sbjct: 98  FGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESS 157

Query: 102 NCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP 161
           +  ++                        + G +          +E  ++ +N ++    
Sbjct: 158 DGHNDTM----------------LDPEQRIWGFETNF----GGLAEIALVKSNQLMPKPD 197

Query: 162 SIDPSDASFLSCGFTTGYGA--AWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKI 218
            +   +A+      +T Y    +   A +++G +V + G  G +G  A   A   G A  
Sbjct: 198 HLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGG-ANP 256

Query: 219 IGIDKNPWKKEKGKAFGMTDFIN--------------PDDEPNKSISELVKGITHGMGVD 264
           I +  +P K E  +A G    I+               D +  K   + ++ +T G  +D
Sbjct: 257 ICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDID 316

Query: 265 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324
             FE  G       ++  T+ G G +         M   +   L    + + G+ F   +
Sbjct: 317 IVFEHPG-RETFGASVFVTRKG-GTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYR 374

Query: 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 365
              +   L+      + ++H  L+    LE+  +A   + +
Sbjct: 375 EAWEANRLIA-----KGRIHPTLSKVYSLEDTGQAAYDVHR 410

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  134 bits (338), Expect = 1e-35
 Identities = 67/412 (16%), Positives = 133/412 (32%), Gaps = 65/412 (15%)

Query: 1   MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL 60
           +    A   K V    + + L++ E+ +      EV V ++ +S+ +  +  +   P P 
Sbjct: 30  LRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPT 89

Query: 61  Y-------------------PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECE 101
           +                     VLG +  GVV   G  V+  K GD VI  +     E E
Sbjct: 90  FHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQE 148

Query: 102 NCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP 161
             T     L  +                +  G            +EY V+ A+ ++    
Sbjct: 149 PATHGDGMLGTEQRAWGFE---------TNFG----------GLAEYGVVRASQLLPKPA 189

Query: 162 SIDPSDASFLSCGFTTGYGA--AWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKI 218
            +   +A+       T Y    + + A++++G  V + G  G +G  A+   +  G    
Sbjct: 190 HLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGG-GIP 248

Query: 219 IGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISEL--------------VKGITHGMGVD 264
           + +  +  K+   +A G    IN  +                       +     G   D
Sbjct: 249 VAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPD 308

Query: 265 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324
             FE TG       ++   + G G V+  G     +   +   L    + + G+      
Sbjct: 309 IVFEHTG-RVTFGLSVIVARRG-GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGA--- 363

Query: 325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 375
              +        ++    +   ++    L E  +A ++++    V KV +  
Sbjct: 364 NHEEQQATNRLFESG--AVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  128 bits (324), Expect = 4e-34
 Identities = 86/334 (25%), Positives = 140/334 (41%), Gaps = 37/334 (11%)

Query: 1   MSNSQA----ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEG 55
           MS S      +             L             +VR K+LY  VCH+D+      
Sbjct: 5   MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64

Query: 56  FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKY 114
           +   +YP V GHE VG V   G +VK+V  GD V +   +G C  CE+C +++ N C K 
Sbjct: 65  WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124

Query: 115 PIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCG 174
            +    +  D        G   Y  +     S +MV +  Y+++   ++     + L C 
Sbjct: 125 ILTYASIYHD--------GTITYGGY-----SNHMVANERYIIRFPDNMPLDGGAPLLCA 171

Query: 175 FTTGYGAAWKEAKVEK-GSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKG 231
             T Y +  K   +++ G  + ++GLG  GLG  AV  A+  G +K+  I  +P KKE+ 
Sbjct: 172 GITVY-SPLKYFGLDEPGKHIGIVGLG--GLGHVAVKFAKAFG-SKVTVISTSPSKKEEA 227

Query: 232 -KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 290
            K FG   F+   D+      E ++       +D   +       L       K   GK+
Sbjct: 228 LKNFGADSFLVSRDQ------EQMQ--AAAGTLDGIIDTVSAVHPLLPLFGLLKSH-GKL 278

Query: 291 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324
           I++G   +  + L   +L  G + + G+  GG+K
Sbjct: 279 ILVGA-PEKPLELPAFSLIAGRKIVAGSGIGGMK 311

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  126 bits (320), Expect = 1e-33
 Identities = 79/324 (24%), Positives = 133/324 (41%), Gaps = 35/324 (10%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC-SEGFPAPLYPRVL 65
           +  K    +   E  K  +         +V + +LYA +CH+DI      +   +YP + 
Sbjct: 3   VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIP 62

Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHE  G+++  G  VK+ K GD+V +  ++  CK C+ C       C K     + L   
Sbjct: 63  GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSF 122

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
             +   + G           +S  +V+D NYV+ VD +      + L C   T Y +  K
Sbjct: 123 HDNEPHMGG-----------YSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTY-SPLK 170

Query: 185 EAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
            +KV KG+ V V G G  GLG  AV  A   G A++    +N  KK+   + G+  F   
Sbjct: 171 FSKVTKGTKVGVAGFG--GLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSMGVKHFYTD 227

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
             +  + +             D+          L + L+      G + ++G+    + P
Sbjct: 228 PKQCKEEL-------------DFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAP 273

Query: 303 LNVIA--LACGGRTLKGTTFGGIK 324
           +  +   +  G R + G+  GGIK
Sbjct: 274 VLSVFDFIHLGNRKVYGSLIGGIK 297

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  124 bits (315), Expect = 8e-33
 Identities = 67/331 (20%), Positives = 126/331 (38%), Gaps = 33/331 (9%)

Query: 1   MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAP 59
           MS  +     A+      +  K  +   +P    ++ +K+    VC +DI   +  +   
Sbjct: 1   MSYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM 60

Query: 60  LYPRVLGHEGVGVVESAGDEV-KEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIA 117
             P V+GHE VG V   G +    +K G  V +   +  C EC+ C ++    C K+   
Sbjct: 61  KMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTT 120

Query: 118 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT 177
            +    D    +S  G           ++ Y+ +  ++VV +  +I    A+ L CG  T
Sbjct: 121 YSQPYEDGY--VSQGG-----------YANYVRVHEHFVVPIPENIPSHLAAPLLCGGLT 167

Query: 178 GYGAAWKEAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235
            Y +         G  V ++GLG  G+G      ++  G A+   I ++  K+E     G
Sbjct: 168 VY-SPLVRNGCGPGKKVGIVGLG--GIGSMGTLISKAMG-AETYVISRSSRKREDAMKMG 223

Query: 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA--LETTKVGKGKVIVI 293
              +I   +E +           +    D    C    + +      +  KVG G+++ I
Sbjct: 224 ADHYIATLEEGDWGEK-------YFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSI 275

Query: 294 GVGVDAMVPLNVIALACGGRTLKGTTFGGIK 324
            +  +    L++        ++  +  G IK
Sbjct: 276 SI-PEQHEMLSLKPYGLKAVSISYSALGSIK 305

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  123 bits (310), Expect = 3e-32
 Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 35/314 (11%)

Query: 18  GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC-SEGFPAPLYPRVLGHEGVGVVESA 76
              L      +      +V ++++   +CHTD+           YP V GHE VG V   
Sbjct: 19  SGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEV 78

Query: 77  GDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK 135
           G +V +   GDIV +   +G C  C  C  ++   C K   + N + ++        GQ 
Sbjct: 79  GSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYIN--------GQP 130

Query: 136 LYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG--AAWKEAKVEKGSS 193
               F     ++  V+   +VVK+   +    A+ L C   T Y   + +   +   G  
Sbjct: 131 TQGGF-----AKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQ--PGLR 183

Query: 194 VAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSI 250
             +LGLG  G+G   V  A+  G   +  I  +  K+E+  +  G  D++   D+     
Sbjct: 184 GGILGLG--GVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGADDYVIGSDQ----- 235

Query: 251 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC 310
              +        +DY  +   V   L   L   K+  GK+I++GV ++  +      L  
Sbjct: 236 -AKMS--ELADSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGV-INNPLQFLTPLLML 290

Query: 311 GGRTLKGTTFGGIK 324
           G + + G+  G +K
Sbjct: 291 GRKVITGSFIGSMK 304

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  118 bits (297), Expect = 2e-30
 Identities = 65/415 (15%), Positives = 112/415 (26%), Gaps = 100/415 (24%)

Query: 7   ITCKAVVCWGLGEPLKV-----EEIQVEPPKSTEVRVKMLYASVCHTDILCSEG------ 55
           IT +AV+    GEP  V      EI  +     EV VK L + V  +DI   +G      
Sbjct: 2   ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP 61

Query: 56  -----FPAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNL 110
                F         G+EG+  V   G  V  ++ GD VIP+++                
Sbjct: 62  AKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG------------- 108

Query: 111 CLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD---------- 160
                                            TW  + + + +  +K+           
Sbjct: 109 ---------------------------------TWRTHALGNDDDFIKLPNPAQSKANGK 135

Query: 161 -PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL--GLGTVGLGAVDGARMHGAAK 217
              +  +  + +S    T Y       K+  G    +   G   VG  A    ++     
Sbjct: 136 PNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN-FN 194

Query: 218 IIGI----DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT--HGMGVDYCFECTG 271
            I +              K  G T  I  D   ++     +K      G        C G
Sbjct: 195 SISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG 254

Query: 272 VPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIALACGGRTLKGTTFGGIKTKS-- 327
             S  +          G ++  G        +P ++        T  G     +   +  
Sbjct: 255 GKS-STGIARKLNNN-GLMLTYGGMSFQPVTIPTSLYIF--KNFTSAGFWVTELLKNNKE 310

Query: 328 ----DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV----KVLIT 374
                L  ++   +  +       +     +      +L +         K LIT
Sbjct: 311 LKTSTLNQIIAWYEEGKLTDA--KSIETLYDGTKPLHELYQDGVANSKDGKQLIT 363

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  114 bits (287), Expect = 5e-29
 Identities = 74/385 (19%), Positives = 135/385 (35%), Gaps = 72/385 (18%)

Query: 6   AITCKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG---FPAP 59
           ++  K +     G P   L+VE   +EP K  EV V+ML   +  +D++   G      P
Sbjct: 2   SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIP 61

Query: 60  LYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN 119
           L P + G+EGVG+VE+ G  V     G  V+P                            
Sbjct: 62  L-PNIPGYEGVGIVENVGAFVSRELIGKRVLP---------------------------- 92

Query: 120 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 179
                    +   G          TW EY+   A++VV +  SID   A+ +     T +
Sbjct: 93  ---------LRGEG----------TWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAW 133

Query: 180 GAAWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 238
               +   +++   + V      +G      +++    ++I + +N    E+    G   
Sbjct: 134 VTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGAAY 192

Query: 239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 298
            I+    P   + E V  +T+G+G D   +  G P   +E   + +   G  + IG+   
Sbjct: 193 VIDTSTAP---LYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG 247

Query: 299 AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF------KLHQLLTHHV- 351
             V    I                   +   P    +            +L  +  H   
Sbjct: 248 IQVNWAEIVTK-AKVHANIFHLRHWNDEVS-PYKWQETFRHLIRLVENEQLRFMKVHSTY 305

Query: 352 KLEEIDKAIQLLKQPDCV--KVLIT 374
           +L ++  A+ +++  +    KV +T
Sbjct: 306 ELADVKAAVDVVQSAEKTKGKVFLT 330

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 98.8 bits (247), Expect = 1e-23
 Identities = 73/361 (20%), Positives = 119/361 (32%), Gaps = 64/361 (17%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLG 66
             +     G P  L+  E     P   E++V+     +   D     G +P P  P  LG
Sbjct: 3   TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLG 62

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
            E  G+V   G  VK +K GD V+                       Y  +  G      
Sbjct: 63  TEAAGIVSKVGSGVKHIKAGDRVV-----------------------YAQSALG------ 93

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAAWKE 185
                             +S    I A+    +  +I     A+    G T  Y    K 
Sbjct: 94  -----------------AYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYY-LLRKT 135

Query: 186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
            +++           G VGL A   A+  G AK+IG      K +     G    IN  +
Sbjct: 136 YEIKPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKAGAWQVINYRE 194

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 304
           E    + E +K IT G  V   ++  G  +    +L+  +  +G ++  G    A+  +N
Sbjct: 195 E---DLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQR-RGLMVSFGNSSGAVTGVN 249

Query: 305 VIAL-ACGGRTLKGTTFGG-IKTKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDK 358
           +  L   G   +   +  G I T+ +L      L     +   K+         L++  +
Sbjct: 250 LGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQR 309

Query: 359 A 359
           A
Sbjct: 310 A 310

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 97.3 bits (243), Expect = 4e-23
 Identities = 72/308 (23%), Positives = 111/308 (36%), Gaps = 58/308 (18%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLG 66
           K +    +G P  L+  + + E P    V V+     +   D     G +PAP  P  LG
Sbjct: 3   KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLG 62

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
            EG GVVE+ GDEV   K GD V                        Y     G      
Sbjct: 63  AEGAGVVEAVGDEVTRFKVGDRVA-----------------------YGTGPLG------ 93

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAAWKE 185
                             +SE  V+    +VK+  S+     A+ +  G T  Y    + 
Sbjct: 94  -----------------AYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQY-LLRQT 135

Query: 186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 244
            +V+ G  +      G VG  A   A+  G AK+IG   +P K    KA G  + I+   
Sbjct: 136 YQVKPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGAWETIDYSH 194

Query: 245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 304
           E    +++ V  +T G      ++  G       +L++    +G V+  G     +  +N
Sbjct: 195 E---DVAKRVLELTDGKKCPVVYDGVG-QDTWLTSLDSVAP-RGLVVSFGNASGPVSGVN 249

Query: 305 VIALACGG 312
           +  LA   
Sbjct: 250 LGILAQKD 257

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 79/379 (20%), Positives = 138/379 (36%), Gaps = 74/379 (19%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG---FPAPLYPRV 64
           KA+    L  P  L   +++        V V +  A VC  D L ++G         P V
Sbjct: 23  KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP-PFV 81

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
            G E  GVV SA  E   +K GD V+                          A N +   
Sbjct: 82  PGIETAGVVRSAP-EGSGIKPGDRVM--------------------------AFNFI--- 111

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                               ++E + +  + ++   P +D ++A  L   + T Y A  +
Sbjct: 112 ------------------GGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYAR 153

Query: 185 EAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 243
             ++  G +V VLG  G +G  A+  A+  G AK+I +       E  K+ G    +  +
Sbjct: 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGADIVLPLE 212

Query: 244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMV 301
           +      ++ V+  T G GVD   +  G      +A+ T     G+++V+G   G    +
Sbjct: 213 EG----WAKAVREATGGAGVDMVVDPIG-GPAFDDAVRTLASE-GRLLVVGFAAGGIPTI 266

Query: 302 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQ-----LLTHHVKLEEI 356
            +N + L     +L G  +G           L + +    KL        ++  + L E 
Sbjct: 267 KVNRLLL--RNASLIGVAWGEFLRTH--ADYLYETQAGLEKLVAEGMRPPVSARIPLSEG 322

Query: 357 DKAIQLLKQPDCV-KVLIT 374
            +A+Q         K+++ 
Sbjct: 323 RQALQDFADGKVYGKMVLV 341

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 96.9 bits (242), Expect = 7e-23
 Identities = 76/377 (20%), Positives = 119/377 (31%), Gaps = 72/377 (19%)

Query: 1   MSNSQAITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FP 57
           M  +     K ++   +G    +K E+  V      E+ +K  Y  V + +    +G +P
Sbjct: 1   MKCTIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP 60

Query: 58  APLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA 117
               P VLG E  G V + G  V   + GD V   YI                       
Sbjct: 61  CEK-PYVLGREASGTVVAKGKGVTNFEVGDQV--AYISN--------------------- 96

Query: 118 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSD----ASFLS 172
                                    ST+++Y  I     V+K+       +    A+ L 
Sbjct: 97  -------------------------STFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLL 131

Query: 173 CGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG 231
              T       +   V+KG  V +    G VGL      +M G A  I +     K +  
Sbjct: 132 QVLTALS-FTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIA 189

Query: 232 KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI 291
           K +G    IN   E    I   V   T+G GVD  F+  G       +L   K  KG  +
Sbjct: 190 KEYGAEYLINASKE---DILRQVLKFTNGKGVDASFDSVG-KDTFEISLAALKR-KGVFV 244

Query: 292 VIGVGVDAMVPLNVIALACGGRTLKGTTFGG-IKTKSDL----PTLLDKCKNKEFKLHQL 346
             G     + P ++  L+    TL      G I    +             +K+  +   
Sbjct: 245 SFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK-- 302

Query: 347 LTHHVKLEEIDKAIQLL 363
           +     L +   A   +
Sbjct: 303 IYKTYPLRDYRTAAADI 319

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 90.4 bits (225), Expect = 2e-20
 Identities = 72/319 (22%), Positives = 108/319 (33%), Gaps = 63/319 (19%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL----YPR 63
            A V    G P     EE++V  P   +VR++     V   D     G P PL     P 
Sbjct: 3   MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62

Query: 64  VLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 123
           V+G E   VVE  G  V +   G+ V                          +   G   
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERVC-----------------------TCLPPLG--- 96

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSC---GFTTGYG 180
                                +S+  +  A  ++KV   +D  D         G T  Y 
Sbjct: 97  --------------------AYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQY- 135

Query: 181 AAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 239
              +  KV+ G  V +    G +G   V  AR  G A +IG      K E  +  G    
Sbjct: 136 LLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKLGCHHT 194

Query: 240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 299
           IN   +     +E+V+ IT G GVD  ++  G  + L ++L+  +  +G     G     
Sbjct: 195 INYSTQ---DFAEVVREITGGKGVDVVYDSIGKDT-LQKSLDCLRP-RGMCAAYGHASGV 249

Query: 300 MVPLNVIALACGGRTLKGT 318
             P+ V+       +L  T
Sbjct: 250 ADPIRVVEDLGVRGSLFIT 268

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 89.2 bits (222), Expect = 4e-20
 Identities = 51/333 (15%), Positives = 96/333 (28%), Gaps = 70/333 (21%)

Query: 8   TCKAVVCWGLGEP--------------LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCS 53
             KA++  G G                L+   I V  P  ++V +K+  AS+  +D+   
Sbjct: 10  EMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFI 69

Query: 54  EGF--PAPLYPRVLGHEGVGVVESAGDEVK-EVKEGDIVIPTYIGECKECENCTSEMTNL 110
           +G      +  R  G EGVG + + GDE   +   G  V                     
Sbjct: 70  KGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRV--------------------- 108

Query: 111 CLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF 170
                ++  G                       +W+EY V +A   + +  ++   D + 
Sbjct: 109 AFATGLSNWG-----------------------SWAEYAVAEAAACIPLLDTVRDEDGAA 145

Query: 171 LSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKE 229
           +     T   A +   K E   +  +      +    +  A+  G  + I   +   +  
Sbjct: 146 MIVNPLTAI-AMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIA 203

Query: 230 KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGK 289
             K  G    +N            ++ +          +      L S           +
Sbjct: 204 LLKDIGAAHVLNEKAPD---FEATLREVMKAEQPRIFLDAVT-GPLASAIFNAMPKR-AR 258

Query: 290 VIVIGV-GVDAMVPLNVIALACGGRTLKGTTFG 321
            I+ G    DA V      L    + ++G    
Sbjct: 259 WIIYGRLDPDATVIREPGQLIFQHKHIEGFWLS 291

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 81.7 bits (202), Expect = 2e-17
 Identities = 54/383 (14%), Positives = 109/383 (28%), Gaps = 74/383 (19%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEG 69
            A+      E               +V V++   ++  +D      F  P     LG + 
Sbjct: 13  TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATP--WAFLGTDY 70

Query: 70  VGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM 129
            G V + G +V  ++ GD V                              G   +   R 
Sbjct: 71  AGTVVAVGSDVTHIQVGDRVY-----------------------------GAQNEMCPRT 101

Query: 130 SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA-------- 181
             +G           +S+Y V       K+   +    A+ L  G +T   A        
Sbjct: 102 PDQG----------AFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPL 151

Query: 182 ----AWKEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 236
               A +     K   V V G  T      +   R+ G   I     +P   +  K+ G 
Sbjct: 152 PSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC--SPHNFDLAKSRGA 209

Query: 237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI-GV 295
            +  +       ++++ ++  T    + Y  +C       +          G  + +   
Sbjct: 210 EEVFDYRAP---NLAQTIRTYTKN-NLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPF 265

Query: 296 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF--KLHQLL------ 347
              A     V      G T+ G             +  ++   ++      QL+      
Sbjct: 266 PEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLV 325

Query: 348 THHVK-----LEEIDKAIQLLKQ 365
            H ++      + I + ++L+++
Sbjct: 326 HHPLRVVQGGFDHIKQGMELVRK 348

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 78.8 bits (194), Expect = 2e-16
 Identities = 45/323 (13%), Positives = 85/323 (26%), Gaps = 91/323 (28%)

Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF------- 56
             A+  ++ +       L ++ I    P   EV +++  + +  +D+    G        
Sbjct: 3   HSALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAK 62

Query: 57  -----------------------PAPLYPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTY 93
                                          +G+EG GVV  AG            +   
Sbjct: 63  ASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV--- 119

Query: 94  IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA 153
                                  A  G                      + +S+Y  I A
Sbjct: 120 -----------------------AAIGG---------------------AMYSQYRCIPA 135

Query: 154 NYVVKVDPSIDPSD-ASFLSCGFTTGYGAAW---KEAKVEKGSSVAVLGL-GTVGLGAVD 208
           +  + +     P+D AS      T     A    +  ++E  S++        +G     
Sbjct: 136 DQCLVLPEGATPADGASSFVNPLT-----ALGMVETMRLEGHSALVHTAAASNLGQMLNQ 190

Query: 209 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE 268
                G  K++ I +   + +  KA G     N       +  + +       G    F+
Sbjct: 191 ICLKDG-IKLVNIVRKQEQADLLKAQGAVHVCNAASP---TFMQDLTEALVSTGATIAFD 246

Query: 269 CTGVPSLLSEALETTKVGKGKVI 291
            TG   L  + L   +    K  
Sbjct: 247 ATGGGKLGGQILTCMEAALNKSA 269

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 74.2 bits (183), Expect = 6e-15
 Identities = 57/294 (19%), Positives = 95/294 (32%), Gaps = 61/294 (20%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYP 62
           Q +    +            +  V  P   ++ V+  +  V  +DI  S G   P+   P
Sbjct: 25  QKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPP 84

Query: 63  RVLGHEGVGVVESAGDEVKE-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
             +G EG+G V + G         G  V     G                          
Sbjct: 85  FDIGFEGIGEVVALGLSASARYTVGQAVAYMAPG-------------------------- 118

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
                                 +++EY V+ A+    V         + L  G  T Y +
Sbjct: 119 ----------------------SFAEYTVVPASIATPVPSVKPEY-LTLLVSGT-TAYIS 154

Query: 182 AWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 240
             +   + +G  V V    G  G  A+  ++      +IG   +  K    K+ G    I
Sbjct: 155 LKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSLGCDRPI 213

Query: 241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
           N   EP   +  ++K   +  GVD  +E  G   +   A++     KG++IVIG
Sbjct: 214 NYKTEP---VGTVLK-QEYPEGVDVVYESVGGA-MFDLAVDALAT-KGRLIVIG 261

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 67.2 bits (165), Expect = 1e-12
 Identities = 44/371 (11%), Positives = 100/371 (26%), Gaps = 84/371 (22%)

Query: 10  KAVVCWGLG---EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL-YPRVL 65
           +    W        + +  + +    + ++ V+     +   D    +  P       V 
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           G +G GV+   G +V     G  V   Y                      +  +G     
Sbjct: 63  GVDGAGVIVKVGAKVDSKMLGRRVA--YHT-------------------SLKRHG----- 96

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW-- 183
                             +++E+ V++ + V+ +  ++    A+ L C   T    AW  
Sbjct: 97  ------------------SFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLT----AWQA 134

Query: 184 -KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 242
            ++  + K   V ++G G V           G   +  +      +      G    +  
Sbjct: 135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNAG-YVVDLVS-ASLSQALAAKRG-VRHLYR 191

Query: 243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 302
           +                       F+     +  +  + + K   G +I I       +P
Sbjct: 192 EPSQVTQ------------KYFAIFDAVNSQN-AAALVPSLKAN-GHIICI----QDRIP 233

Query: 303 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF--------KLHQLLTHHVKLE 354
             +        +      G +    D        +  E         K+        + E
Sbjct: 234 APIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFE 293

Query: 355 EIDKAIQLLKQ 365
           ++ +A+   +Q
Sbjct: 294 QMIEALDHSEQ 304

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 65.3 bits (160), Expect = 5e-12
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 10 KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRVL 65
          +AVV  G G    L++    +  P+  E+++++    +   D++  +G     P  P V 
Sbjct: 5  RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVP 64

Query: 66 GHEGVGVVESAGDEVKEVKEGDIVI 90
          G E  G+VE+ GD VK  + GD V+
Sbjct: 65 GFECSGIVEALGDSVKGYEIGDRVM 89

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 48/255 (18%), Positives = 89/255 (34%), Gaps = 33/255 (12%)

Query: 145 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVG 203
           W+E +     +V K+   +  S+A+     F T Y   ++ A + +G SV V    G VG
Sbjct: 97  WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVG 156

Query: 204 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 263
                         + G   + +K E  K    T   + + +      + VK I+   GV
Sbjct: 157 QAVAQLCSTVPNVTVFGTA-STFKHEAIKDSV-THLFDRNAD----YVQEVKRIS-AEGV 209

Query: 264 DYCFECTGVPSLLSEALETTKVGKGKVIVIGV----------------GVDAMVPLNVIA 307
           D   +C        + L   K   G  I+ G                     +  +N I 
Sbjct: 210 DIVLDCLCG-DNTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIK 267

Query: 308 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQ------LLTHHVKLEEIDKAIQ 361
           L    + + G +   +  K     L+     K   L+       ++     LEE+ +A+Q
Sbjct: 268 LYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQ 327

Query: 362 LLKQPDCV-KVLITI 375
            +     + K+++ +
Sbjct: 328 RIHDRGNIGKLILDV 342

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 64.9 bits (159), Expect = 7e-12
 Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 61/219 (27%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-------FPAPL 60
           KA+     G P  LK+ +      +  ++ +K+  AS+   D     G           L
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
            P  LG++  G V   G +V  V  GD V+                              
Sbjct: 68  -PSGLGYDFSGEVIELGSDVNNVNIGDKVM------------------------------ 96

Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 180
                 +                 ++EY+    + +++    +    A+ L     T   
Sbjct: 97  ----GIAGFPDHP---------CCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLT--- 140

Query: 181 AAW---KEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGA 215
            A     +A+V++G  V +    G VG  A+  A+  G 
Sbjct: 141 -ALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT 178

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 62.3 bits (152), Expect = 5e-11
 Identities = 57/299 (19%), Positives = 94/299 (31%), Gaps = 58/299 (19%)

Query: 1   MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL 60
           MS +   T  A V      P  + ++    P   +V V++  +     D     G     
Sbjct: 1   MSLTTP-TMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHA 59

Query: 61  ---YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA 117
               P +LG +  G V + G EV   + GD V                            
Sbjct: 60  QQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFG-------------------LTGGVGG 100

Query: 118 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT 177
           L G                       T +++  +DA  +     ++    AS L   F T
Sbjct: 101 LQG-----------------------THAQFAAVDARLLASKPAALTMRQASVLPLVFIT 137

Query: 178 GYGAAWKEAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235
            +      A+V+ G +V + G G  G+G  A+  A   G A++    +     E  +  G
Sbjct: 138 AWEGLVDRAQVQDGQTVLIQG-GGGGVGHVAIQIALARG-ARVFATARGS-DLEYVRDLG 194

Query: 236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 294
            T         ++   +     T G G D  ++  G P  L  +    K   G V+   
Sbjct: 195 ATPIDA-----SREPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRF-GHVVSCL 246

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 62.8 bits (153), Expect = 7e-11
 Identities = 52/247 (21%), Positives = 73/247 (29%), Gaps = 67/247 (27%)

Query: 24  EEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYP--RVLGHEGVGVVESAGDEVK 81
           E     P    EVR+ M  A V   D L + G    +YP    LG EG GVV   G  V 
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDALIALG----MYPGVASLGSEGAGVVVETGPGVT 284

Query: 82  EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFS 141
            +  GD V+                                                   
Sbjct: 285 GLAPGDRVM------------------------------------------------GMI 296

Query: 142 CSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-GLG 200
              +    V D   V ++      + A+ +   F T Y A    A +  G S+ V    G
Sbjct: 297 PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAG 356

Query: 201 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD---FINPDDEPNKSISELVKGI 257
            VG+ A+  AR  G A++             +A  ++                 +   G 
Sbjct: 357 GVGMAAIQLARHLG-AEVYATASEDKW----QAVELSREHLA----SSRTCDFEQQFLGA 407

Query: 258 THGMGVD 264
           T G GVD
Sbjct: 408 TGGRGVD 414

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 66/315 (20%), Positives = 101/315 (32%), Gaps = 70/315 (22%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           +AI  +       G   K   + +  PK  E+ VK+   SV   D        +   PRV
Sbjct: 4   KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA-PRV 62

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           LG + +GVVES G+EV    +GDIV   Y G                       NG    
Sbjct: 63  LGFDAIGVVESVGNEVTMFNQGDIVY--YSGS-------------------PDQNG---- 97

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW- 183
                              + +EY +I+   V K   +I    A  L     T    A+ 
Sbjct: 98  -------------------SNAEYQLINERLVAKAPKNISAEQAVSLPLTGIT----AYE 134

Query: 184 ---------KEAKVEKGSSVAVL-GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA 233
                    +     +G ++ ++ G G VG  A   A+ +G  ++I         E  K 
Sbjct: 135 TLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKK 193

Query: 234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 293
            G    +N  +                  VDY F          + ++  K   G +  I
Sbjct: 194 MGADIVLNHKESLLNQFKT-----QGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATI 247

Query: 294 GVGVDAMVPLNVIAL 308
              V      ++ AL
Sbjct: 248 ---VAFENDQDLNAL 259

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 57/306 (18%), Positives = 101/306 (33%), Gaps = 61/306 (19%)

Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLGHEGVGVVESAG 77
             L   E+    P   ++ V++   SV   D        P     +V+G++  G+V + G
Sbjct: 38  ASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVG 97

Query: 78  DEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY 137
            +V   + GD V   Y G                    I   G                 
Sbjct: 98  PDVTLFRPGDEVF--YAGS-------------------IIRPG----------------- 119

Query: 138 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVA-- 195
                 T +E+ ++D   V +   ++D ++A+ L     T + A +    V K    A  
Sbjct: 120 ------TNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAP 173

Query: 196 -VL---GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 251
            +L   G G VG  AV  AR      +I     P  +E  K+ G    I+     +K ++
Sbjct: 174 AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVID----HSKPLA 229

Query: 252 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 311
             V  +  G    + F  T      +E  +      G+  +I    D     +++     
Sbjct: 230 AEVAALGLG-APAFVFSTTHTDKHAAEIADLIAPQ-GRFCLI----DDPSAFDIMLFKRK 283

Query: 312 GRTLKG 317
             ++  
Sbjct: 284 AVSIHH 289

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 58.7 bits (143), Expect = 7e-10
 Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 27/238 (11%)

Query: 147 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLG 205
           E + +    ++ +   + P +A+     F T Y  A K A+   G  V V    G +G  
Sbjct: 83  ERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAY-LALKRAQARPGEKVLVQAAAGALGTA 141

Query: 206 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 265
           AV  AR  G  +++     P K     A G  +     +          +      G+D 
Sbjct: 142 AVQVARAMG-LRVLAAASRPEKLALPLALGAEEAATYAEV--------PERAKAWGGLDL 192

Query: 266 CFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIALACGGRTLKGTTFGGI 323
             E  G    + E+L     G G+++ IG   G  A +P   +        + G     +
Sbjct: 193 VLEVRG--KEVEESLGLLAHG-GRLVYIGAAEGEVAPIPPLRLMR--RNLAVLGFWLTPL 247

Query: 324 KTKSDLPTLLDKCKNKEFKLHQ-----LLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 375
             +     L+++               ++       E + A + L       KV++ +
Sbjct: 248 LRE---GALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 56.0 bits (136), Expect = 4e-09
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG---FPAPLYPRVLG 66
          KA V   LG PL++ ++     +  EV +++    +   D L   G         P + G
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-PFIPG 60

Query: 67 HEGVGVVESAGDEV 80
           E VGVVE  G   
Sbjct: 61 MEVVGVVE--GRRY 72

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 10  KAVVCWGLGEP--LKVE-EIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRV 64
           +AV  +  G P  LK+  +I V  PK  +V +K+    V   +     G     PL P  
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 90

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVI 90
            G +  GV+E+ GD     K+GD V 
Sbjct: 91  PGSDVAGVIEAVGDNASAFKKGDRVF 116

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 9/176 (5%)

Query: 147 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLG 205
           EY +   + V K+   +D    + +   + T Y A    A V+ G SV V G  G VGL 
Sbjct: 127 EYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLA 186

Query: 206 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 265
           A   AR +G  KI+G       ++     G  +  N  +       + +K      G+D 
Sbjct: 187 ACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVN---YIDKIKKYVGEKGIDI 242

Query: 266 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 321
             E       LS+ L     G G+VIV+G      + +N         ++ G T  
Sbjct: 243 IIEMLA-NVNLSKDLSLLSHG-GRVIVVGSR--GTIEINPRDTMAKESSIIGVTLF 294

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 4/85 (4%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRVL 65
           + V     G P  + + +  +      EV V+     V   DI   +G   P      +L
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPIL 89

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVI 90
           G E  G +   G  V     GD V 
Sbjct: 90  GLELSGEIVGVGPGVSGYAVGDKVC 114

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 64/312 (20%), Positives = 99/312 (31%), Gaps = 78/312 (25%)

Query: 10  KAVVC--WGLGEPLKV-EEIQV-EPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY---- 61
            A V   +G  E L+  + + +       EV VK+  ASV   D+    G+ A       
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 62  ------------PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTN 109
                       P  LG +  GVV   G +VK  K GD V                    
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVW------------------- 123

Query: 110 LCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS 169
                            + +    Q         T SE++V+  N V     S+  + A+
Sbjct: 124 -----------------AAVPPWKQ--------GTLSEFVVVSGNEVSHKPKSLTHTQAA 158

Query: 170 FLSCGFTTGYGAAWKEAKVE----KGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKN 224
            L     T + A  K   +      G  V +LG  G VG  A+   +    A +  +  +
Sbjct: 159 SLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-S 216

Query: 225 PWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 284
               E  +  G  D I+       S+ E +K        D+  +  G  +  + A +  K
Sbjct: 217 QDASELVRKLGADDVIDYKSG---SVEEQLKS---LKPFDFILDNVGGST-ETWAPDFLK 269

Query: 285 VGKGKVIVIGVG 296
              G   V  V 
Sbjct: 270 KWSGATYVTLVT 281

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF--PAPLYPRVL 65
            AV     G P  L V+E+    P   EV +K+  +++   D++  +G   P P    +L
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNIL 83

Query: 66  GHEGVGVVESAGDEVK-EVKEGDIV 89
           G E  G V   G   +   K GD  
Sbjct: 84  GLEASGHVAELGPGCQGHWKIGDTA 108

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 10/176 (5%)

Query: 147 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT--VGL 204
           +Y+ +    ++ +   +  + A+ +   + T +        V+ G  V +   G   VG 
Sbjct: 119 QYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHA-GLSGVGT 177

Query: 205 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 264
            A+   RM GA   +    +  K +  +  G     N   E     SE     T G GV+
Sbjct: 178 AAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKE---DFSEATLKFTKGAGVN 233

Query: 265 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR-TLKGTT 319
              +C G  S   + +    +  G+ ++ G+     +   + +     R +L  + 
Sbjct: 234 LILDCIG-GSYWEKNVNCLALD-GRWVLYGLMGGGDINGPLFSKLLFKRGSLITSL 287

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 40/314 (12%), Positives = 73/314 (23%), Gaps = 120/314 (38%)

Query: 15  WGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY--PR--------- 63
           + L  P+K E+ Q  P   T      +Y      D L ++      Y   R         
Sbjct: 93  F-LMSPIKTEQRQ--PSMMTR-----MYIE-QR-DRLYNDNQVFAKYNVSRLQPYLKLRQ 142

Query: 64  ------------VLGHEGVG----VVESAGDE-VKEVKEGDIVIPTY---IGECKECENC 103
                       + G  G G     ++      V+   +  I    +   +  C   E  
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI----FWLNLKNCNSPETV 198

Query: 104 TSEMTNLCLK----------------------------------YPIALNGLMLDSTSRM 129
              +  L  +                                  Y   L  L+L      
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL--LVLL----- 251

Query: 130 SVRGQKLYHIF--SCS---TWSEYMVIDA-NYVVKVDPSIDPSDASFLSCGFTTGYG--- 180
           +V+  K ++ F  SC    T     V D  +       S+D       S   T       
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH-----HSMTLTPDEVKSL 306

Query: 181 -AAWKEAKVEKGSSVAV----LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 235
              + + + +      +      L  +         +           + WK        
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSII------AESIRDGLATW----DNWKHVNCDKLT 356

Query: 236 MT-----DFINPDD 244
                  + + P +
Sbjct: 357 TIIESSLNVLEPAE 370

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 21/121 (17%)

Query: 153 ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV-LGLGTVGLGAVDGAR 211
           ++ VV +  ++  ++A+     + T + +  +  ++  G  V +    G VG+ AV  A+
Sbjct: 1   SDLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK 60

Query: 212 MHGAAKIIGIDKNPWKKEKGKAFGM--------TDFINPDDEPNKSISELVKGITHGMGV 263
           M G A+I     +  K+E     G+         DF           ++ +  +T G GV
Sbjct: 61  MIG-ARIYTTAGSDAKREMLSRLGVEYVGDSRSVDF-----------ADEILELTDGYGV 108

Query: 264 D 264
           D
Sbjct: 109 D 109

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 36/247 (14%), Positives = 69/247 (27%), Gaps = 60/247 (24%)

Query: 29   EPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYP--RVLGHEGVGVVESAGDEVKEVKEG 86
             P    +    + Y S+   D++ + G          + G           +       G
Sbjct: 1555 LPASCQDRLCSVYYTSLNFRDVMLATG----KLSPDSIPGKWLTRDCMLGMEFSGRDASG 1610

Query: 87   DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWS 146
              V+                             G+                        +
Sbjct: 1611 RRVM-----------------------------GM------------------VPAEGLA 1623

Query: 147  EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-GLGTVGLG 205
              +++  +   +V  +    +A+ +   +TT Y +     +++ G SV +  G G VG  
Sbjct: 1624 TSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQA 1683

Query: 206  AVDGARMHGA---AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG 262
            A+  A   G      +   +K  + + +      T F N  D    S  + V   T G G
Sbjct: 1684 AIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRD---TSFEQHVLRHTAGKG 1740

Query: 263  VDYCFEC 269
            VD     
Sbjct: 1741 VDLVLNS 1747

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 75/366 (20%), Positives = 122/366 (33%), Gaps = 92/366 (25%)

Query: 22  KVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL---YPRVLGHEGVGVVESAGD 78
            V+ I  E      V +K+ Y+ + + D L  +     +   YP +LG +  G V S+ D
Sbjct: 20  HVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKA-GGNIVREYPLILGIDAAGTVVSSND 78

Query: 79  EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 138
                 EGD VI                                              Y 
Sbjct: 79  P--RFAEGDEVI---------------------------ATS----------------YE 93

Query: 139 IFSCSTW---SEYMVIDANYVVKVDPSIDPSDASFL-SCGFTTGYGAAWKEAK--VEKGS 192
           +   S     SEY  +  +++V +  ++   +A    + GFT        E      +  
Sbjct: 94  L-GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKG 152

Query: 193 SVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 251
           SV V G  G VG  AV      G   ++    N    +  K  G ++ I+ +D  + ++ 
Sbjct: 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQLGASEVISREDVYDGTLK 211

Query: 252 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV---IAL 308
            L K    G  VD      G    L+  L   + G G V V G+     VP  V   I  
Sbjct: 212 ALSKQQWQG-AVD----PVG-GKQLASLLSKIQYG-GSVAVSGLTGGGEVPATVYPFI-- 262

Query: 309 ACGGRTLKGTTFGGI-------KTKSD----LPTLLDKCKNKEFKLHQLLTHHVKLEEID 357
                 L+G +  GI         ++     + + L        +L  ++   V LEE  
Sbjct: 263 ------LRGVSLLGIDSVYCPMDVRAAVWERMSSDLKP-----DQLLTIVDREVSLEETP 311

Query: 358 KAIQLL 363
            A++ +
Sbjct: 312 GALKDI 317

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	375
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.89
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.25
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.97
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.83
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.74
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.72
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.65
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.61
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.61
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.33
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.22
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.2
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.14
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.05
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.04
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.97
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.96
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.91
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.8
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.79
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.77
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.71
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.71
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.71
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.65
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.64
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.63
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.55
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.46
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.44
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.44
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.41
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.36
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.35
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.28
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.26
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.22
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.19
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.19
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.13
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.12
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.12
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.1
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.02
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.0
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.98
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.98
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.97
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.96
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.95
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.94
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.92
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.89
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.88
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.88
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.87
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.85
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.83
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.83
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.81
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.8
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.8
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.8
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.75
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.75
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.74
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.71
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.71
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.71
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.71
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.71
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.7
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.7
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.69
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.69
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.69
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.69
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.68
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.68
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.66
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.66
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.66
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.65
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.65
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.64
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.63
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.63
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.61
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.61
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.61
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.57
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.56
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.56
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.55
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.55
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.54
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.54
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.53
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.52
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.52
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.51
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.5
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.5
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.5
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.5
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.49
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.49
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.49
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.48
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.48
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.47
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.46
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.45
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.45
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.44
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.44
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.44
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.44
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.42
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.42
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.42
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.41
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.41
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.4
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.4
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.4
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.4
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.4
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.39
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.38
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.38
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.37
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.37
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.37
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.37
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.35
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.35
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.35
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.34
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.34
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.34
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.34
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.33
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.33
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.32
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.32
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.32
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.32
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.32
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.31
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.31
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.31
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.31
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.3
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.3
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.29
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.29
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.28
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.28
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.27
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.27
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.27
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.27
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.26
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.26
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.26
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.26
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.25
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.25
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.25
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.25
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.23
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.22
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.21
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.2
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.19
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.19
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.18
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.17
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.17
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.16
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.16
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.15
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.15
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.15
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.15
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.14
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.14
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.14
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.14
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.14
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.13
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.13
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.12
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.11
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	96.11
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.11
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.1
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.1
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.1
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.09
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.09
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.08
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.08
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.08
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.08
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.07
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.07
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.07
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.06
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.06
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.06
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.05
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.05
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.04
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.04
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.04
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.04
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.03
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.03
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.03
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.02
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.02
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.02
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.01
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.01
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.01
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.99
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	95.99
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.99
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.98
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	95.97
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.97
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.97
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.96
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	95.96
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.96
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.95
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	95.93
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.93
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.93
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.92
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	95.92
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.91
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.91
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.91
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.9
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.89
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.89
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.89
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.89
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.89
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.88
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.87
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.87
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.86
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.86
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.86
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.85
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.85
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.85
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.85
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.84
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.84
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.84
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.83
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.83
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.83
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.83
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.82
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.82
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.81
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.8
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	95.78
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.78
1spx_A	278	Short-chain reductase family member (5L265); paral	95.78
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.76
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.76
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.75
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.74
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.73
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.73
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.72
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.71
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.71
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.7
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.7
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.7
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.7
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.7
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.7
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.69
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.69
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.68
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.68
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.68
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.67
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.66
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.66
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.65
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.64
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.64
4had_A	350	Probable oxidoreductase protein; structural genomi	95.64
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.63
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.63
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.63
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.63
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.62
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.62
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.6
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.58
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.58
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.57
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.57
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.57
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.57
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.56
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.56
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.56
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.56
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.55
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.54
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.54
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.53
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	95.52
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.52
3k6r_A	278	Putative transferase PH0793; structural genomics,	95.51
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.51
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.5
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.5
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.5
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.49
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.49
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.49
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.49
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.48
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.48
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.48
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.48
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.47
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	95.47
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.47
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.46
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.45
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.44
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.44
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.44
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.43
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.43
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.42
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.42
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.41
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.41
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	95.4
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.4
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.4
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.4
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.39
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.39
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.38
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.38
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.38
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.37
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.37
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.34
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.34
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.34
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.34
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.34
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	95.33
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.32
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.32
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.32
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.32
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.31
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.3
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.26
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.26
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.25
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.25
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.25
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.24
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.24
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.24
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.22
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.21
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.19
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	95.19
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	95.18
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	95.18
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	95.18
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.17
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	95.17
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	95.16
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.15
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.13
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.12
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.12
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.12
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.11
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.11
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.11
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.11
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.1
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.08
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.08
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.06
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.05
3f4l_A	345	Putative oxidoreductase YHHX; structural genomics,	95.04
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.03
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	95.02
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.01
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.01
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.01
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.0
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.0
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	94.99
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	94.99
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	94.98
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	94.98
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.97
2o07_A	304	Spermidine synthase; structural genomics, structur	94.97
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	94.97
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	94.97

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=4.3e-65  Score=486.00  Aligned_cols=372  Identities=45%  Similarity=0.809  Sum_probs=332.4

Q ss_pred             CCCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201            1 MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         1 m~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      |+..+|++|||+++++++++++++++|.|+|+++||+|||.+++||++|++ +.|..+...+|.++|||++|+|+++|++
T Consensus         1 ~~~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~   80 (378)
T 3uko_A            1 ATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG   80 (378)
T ss_dssp             CCTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTT
T ss_pred             CCcccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCC
Confidence            456788999999999999889999999999999999999999999999999 9888777788999999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCccccccccccc-cccc-CCCcccccccCcceecccccCceeeeEEeecccEE
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV  157 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  157 (375)
                      |++|++||||++.+..+|+.|++|++|++++|++..... .|+. .+|...++.+|...++..+.|+|+||++++++.++
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  160 (378)
T 3uko_A           81 VTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVA  160 (378)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheE
Confidence            999999999999999999999999999999999865421 2433 55655667777777777788899999999999999


Q ss_pred             EcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      ++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+||++|+++|++++++++|+++++++|++
T Consensus       161 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~  240 (378)
T 3uko_A          161 KIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN  240 (378)
T ss_dssp             ECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCC
T ss_pred             ECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999999988889999999999999999999999999999997899999999999999999999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEE
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLK  316 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~  316 (375)
                      .++++.+ ...++.+.+++++++ ++|+|||++|+++.++.+++++++++|+++.+|.... ....+++..++ +++++.
T Consensus       241 ~vi~~~~-~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~-~~~~i~  317 (378)
T 3uko_A          241 EFVNPKD-HDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWK  317 (378)
T ss_dssp             EEECGGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH-TTCEEE
T ss_pred             EEEcccc-CchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh-cCcEEE
Confidence            9999872 126899999999988 9999999999987899999999993299999997653 45666777666 589999


Q ss_pred             EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ++.++.+...++++++++++.+|++++.++++++|||+++++||+.+.+++..|+||++
T Consensus       318 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~  376 (378)
T 3uko_A          318 GTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDT  376 (378)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEET
T ss_pred             EEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEec
Confidence            98766554556789999999999999989999999999999999999998888999975

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.1e-62  Score=468.65  Aligned_cols=368  Identities=40%  Similarity=0.713  Sum_probs=315.1

Q ss_pred             CCC-CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCC
Q 017201            1 MSN-SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         1 m~~-~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      |++ ++|++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++ +.|..+ ..+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECT
T ss_pred             CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECC
Confidence            776 679999999999998789999999999999999999999999999999 888665 56899999999999999999


Q ss_pred             CCCCCCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEE
Q 017201           79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV  157 (375)
Q Consensus        79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  157 (375)
                      +|++|++||||++.+..+|+.|++|++|+++.|++..... .|+..+|...++.+|....+....|+|+||++++++.++
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVA  159 (373)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEE
T ss_pred             CCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEE
Confidence            9999999999999999999999999999999999764310 133333322222333322223334799999999999999


Q ss_pred             EcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      ++|++++++ ||++++++.|||+++.+.+++++|++|||+|+|++|++++|+||++|+++|++++++++|+++++++|++
T Consensus       160 ~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~  238 (373)
T 1p0f_A          160 KIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT  238 (373)
T ss_dssp             EECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred             ECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence            999999999 9999999999999888889999999999999999999999999999987899999999999999999999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCC-eEEEEEccCCC-ccccchHHHhhcCCceE
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK-GKVIVIGVGVD-AMVPLNVIALACGGRTL  315 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~  315 (375)
                      .++++.+ ..+++.+.+++++++ ++|+|||++|+.+.++.+++++++ + |+++.+|.... ....+++..++.++ ++
T Consensus       239 ~vi~~~~-~~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i  314 (373)
T 1p0f_A          239 ECLNPKD-YDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SL  314 (373)
T ss_dssp             EEECGGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EE
T ss_pred             EEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eE
Confidence            9998763 014688889888887 999999999987789999999999 6 89999997653 34567777777677 99


Q ss_pred             EEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          316 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      .++..+.+. .++++++++++++|++++.++++++|||+++++|++.+++++..|+||++
T Consensus       315 ~g~~~~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          315 KGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             EECSGGGCC-GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred             EeeccCCcC-HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence            988654332 25789999999999999888899999999999999999888778999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=5.3e-62  Score=464.47  Aligned_cols=366  Identities=40%  Similarity=0.741  Sum_probs=312.0

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ++|++|||+++.+++.+++++++|.|+|+++||+|||.+++||++|++ +.|. +...+|.++|||++|+|+++|++|++
T Consensus         4 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~   82 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTN   82 (376)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCcc
Confidence            578899999999998789999999999999999999999999999999 8876 44568999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccc----ccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEE
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYP----IAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV  157 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~----~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  157 (375)
                      +++||||++.+..+|+.|++|++|+++.|++..    ... .|+..+|...++.+|....+....|+|+||++++++.++
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  162 (376)
T 1e3i_A           83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA  162 (376)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEE
Confidence            999999999999999999999999999998754    100 133222211111112111122234699999999999999


Q ss_pred             EcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      ++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+||++|+++|++++++++|+++++++|++
T Consensus       163 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~  242 (376)
T 1e3i_A          163 RVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT  242 (376)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred             ECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence            99999999999999999999999888889999999999999999999999999999987899999999999999999999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCC-eEEEEEccCCCccccchHHHhhcCCceEE
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK-GKVIVIGVGVDAMVPLNVIALACGGRTLK  316 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  316 (375)
                      .++++.+ ..+++.+.+++++++ ++|+|||++|+.+.++.+++++++ + |+++.+|... ....+++..++.++ ++.
T Consensus       243 ~vi~~~~-~~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~~-~~~~~~~~~~~~~~-~i~  317 (376)
T 1e3i_A          243 DCLNPRE-LDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAKV-DEMTIPTVDVILGR-SIN  317 (376)
T ss_dssp             EEECGGG-CSSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCSS-SEEEEEHHHHHTTC-EEE
T ss_pred             EEEcccc-ccchHHHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCCC-CccccCHHHhhccC-eEE
Confidence            9998763 114688888888887 999999999987789999999999 5 8999999854 45677777777788 999


Q ss_pred             EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ++..+.+...++++++++++.+|++++.++++++|||+++++|++.+++++..|+||++
T Consensus       318 g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  376 (376)
T 1e3i_A          318 GTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF  376 (376)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence            88654332345788999999999999888899999999999999999888878999975

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3.7e-62  Score=465.15  Aligned_cols=368  Identities=42%  Similarity=0.760  Sum_probs=315.1

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ++|++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++ +.|..+...+|.++|||++|+|+++|++|++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   81 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence            468899999999998789999999999999999999999999999999 8887665578999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +++||||++.+..+|+.|++|++|+++.|++..... .|+..+|...++.+|....+..+.|+|+||++++++.++++|+
T Consensus        82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (373)
T 2fzw_A           82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (373)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCC
Confidence            999999999999999999999999999998754210 1333333222223333222333457999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      ++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.+++
T Consensus       162 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  241 (373)
T 2fzw_A          162 LAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN  241 (373)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            99999999999999999998888889999999999999999999999999999878999999999999999999999998


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCC-eEEEEEccCCC-ccccchHHHhhcCCceEEEEe
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK-GKVIVIGVGVD-AMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      +.+ ..+++.+.+++++++ ++|+|||++|+.+.++.+++++++ + |+++.+|.... ...++++..++.++ ++.++.
T Consensus       242 ~~~-~~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~  317 (373)
T 2fzw_A          242 PQD-FSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTA  317 (373)
T ss_dssp             GGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECS
T ss_pred             ccc-ccccHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEec
Confidence            763 114688888888887 999999999987789999999999 6 89999997653 34567777777677 999886


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      +..+...++++++++++.+|++++.++++++|||+++++|++.+++++..|+||++
T Consensus       318 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          318 FGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence            54332345688999999999999888899999999999999999888778999975

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=9.8e-62  Score=462.30  Aligned_cols=367  Identities=39%  Similarity=0.713  Sum_probs=313.7

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .+|++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++ +.|..+.+ +|.++|||++|+|+++|++|++
T Consensus         4 ~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~   82 (374)
T 2jhf_A            4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTT   82 (374)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCS
T ss_pred             CCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCC
Confidence            578899999999998789999999999999999999999999999999 88866543 8999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +++||||++.+..+|+.|++|++|++++|++..... .|+..+|...++.+|....+....|+|+||++++++.++++|+
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  162 (374)
T 2jhf_A           83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDA  162 (374)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCC
Confidence            999999999999999999999999999999864310 1333233222222332222233347999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      ++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++.+++
T Consensus       163 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  242 (374)
T 2jhf_A          163 ASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN  242 (374)
T ss_dssp             TCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEec
Confidence            99999999999999999998888899999999999999999999999999999878999999999999999999999998


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCC-eEEEEEccCCC-ccccchHHHhhcCCceEEEEe
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK-GKVIVIGVGVD-AMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      +.+ ..+++.+.+++++++ ++|+|||++|..+.++.+++++++ + |+++.+|.... ....+++..++.++ ++.++.
T Consensus       243 ~~~-~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~  318 (374)
T 2jhf_A          243 PQD-YKKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAI  318 (374)
T ss_dssp             GGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECS
T ss_pred             ccc-cchhHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEec
Confidence            763 014688888888887 999999999987789999999999 6 89999997653 34567777777788 999886


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ...+...++++++++++++|++++.++++++|||+++++|++.+.+++..|+||++
T Consensus       319 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          319 FGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence            54433345788999999999999888899999999999999999888778999975

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.2e-61  Score=458.81  Aligned_cols=367  Identities=40%  Similarity=0.721  Sum_probs=313.1

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc--ccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL--CSEGFPAPLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~--~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      .+|++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++  +.|..+ ..+|.++|||++|+|+++|++|+
T Consensus         4 ~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~   82 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVT   82 (374)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCC
T ss_pred             CCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCc
Confidence            578899999999998789999999999999999999999999999997  455544 56899999999999999999999


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      ++++||||++.+..+|+.|++|++|+++.|++..... .|+..+|...+..+|...++....|+|+||++++++.++++|
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P  162 (374)
T 1cdo_A           83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (374)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             cCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECC
Confidence            9999999999999999999999999999999765310 133333322222233322223334799999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++
T Consensus       163 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  242 (374)
T 1cdo_A          163 PSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFV  242 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEE
T ss_pred             CCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEE
Confidence            99999999999999999999888888999999999999999999999999999987899999999999999999999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCC-eEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK-GKVIVIGVGVDAMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      ++.+ ..+++.+.+++++++ ++|+|||++|..+.++.+++++++ + |+++.+|........+++..++.++ ++.++.
T Consensus       243 ~~~~-~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~  318 (374)
T 1cdo_A          243 NPND-HSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSM  318 (374)
T ss_dssp             CGGG-CSSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSSSCEEECHHHHHTTC-EEEECS
T ss_pred             eccc-cchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEe
Confidence            8763 114688888888887 999999999987789999999999 6 8999999775334567777777778 999886


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ...+...++++++++++.+|++++.++++++|||+++++|++.+++++..|+||+|
T Consensus       319 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          319 FGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence            54332345688999999999999888899999999999999999988878999975

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-61  Score=459.85  Aligned_cols=365  Identities=30%  Similarity=0.492  Sum_probs=308.6

Q ss_pred             CCCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201            1 MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         1 m~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      |+.  +++|||+++.+++.+++++++|.|+|+++||+|||.+++||++|++ +.|.++ ..+|.++|||++|+|+++|++
T Consensus         1 ms~--~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~   77 (371)
T 1f8f_A            1 MSE--LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPN   77 (371)
T ss_dssp             -----CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTT
T ss_pred             CCc--cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCC
Confidence            555  4589999999998779999999999999999999999999999999 888654 457999999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccc-cccccCCCccccc-ccCcce-ecccccCceeeeEEeecccE
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMS-VRGQKL-YHIFSCSTWSEYMVIDANYV  156 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~v~~~~~  156 (375)
                      |++|++||||++.+ .+|+.|++|++|++++|++.... ..|...+|...++ .+|... ......|+|+||++++++.+
T Consensus        78 v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~  156 (371)
T 1f8f_A           78 VTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNT  156 (371)
T ss_dssp             CCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhhe
Confidence            99999999999999 99999999999999999876421 0121122211110 011000 00123469999999999999


Q ss_pred             EEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201          157 VKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       157 ~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+
T Consensus       157 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  236 (371)
T 1f8f_A          157 VKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA  236 (371)
T ss_dssp             EEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC
T ss_pred             EECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence            99999999999999999999999998788899999999999999999999999999999679999999999999999999


Q ss_pred             cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceE
Q 017201          237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTL  315 (375)
Q Consensus       237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~  315 (375)
                      +.++++.+   .++.+.+++++++ ++|+|||++|..+.++.++++++++ |+++.+|.... ....+++..++.|++++
T Consensus       237 ~~vi~~~~---~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  311 (371)
T 1f8f_A          237 THVINSKT---QDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTI  311 (371)
T ss_dssp             SEEEETTT---SCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEE
T ss_pred             CEEecCCc---cCHHHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEE
Confidence            99999877   6888889998888 9999999999877899999999997 99999997753 34577777787899999


Q ss_pred             EEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          316 KGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      .++........++++++++++++|++++.+++++ |||+++++|++.+++++..|+||++
T Consensus       312 ~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~  370 (371)
T 1f8f_A          312 LGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKI  370 (371)
T ss_dssp             EECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             EEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEee
Confidence            9987543322356889999999999998888888 9999999999999887778999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.6e-60  Score=451.39  Aligned_cols=338  Identities=23%  Similarity=0.391  Sum_probs=305.9

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ..|.+|||+++.+++ .++++++|.|+|++|||+|||.+++||++|++ +.|.+ ...+|.++|||++|+|+++|++|++
T Consensus        19 ~~p~~mkA~v~~~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~~   96 (370)
T 4ej6_A           19 YFQSMMKAVRLESVG-NISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVRD   96 (370)
T ss_dssp             --CCEEEEEEEEETT-EEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCCS
T ss_pred             ccchheEEEEEecCC-ceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCCC
Confidence            457789999999987 59999999999999999999999999999999 88876 3567999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      |++||||++.+..+|+.|.+|++|+++.|++...  .|+..+|                  +|+||++++++.++++|++
T Consensus        97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~~P~~  156 (370)
T 4ej6_A           97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA--IGIHRDG------------------GFAEYVLVPRKQAFEIPLT  156 (370)
T ss_dssp             SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE--BTTTBCC------------------SSBSEEEEEGGGEEEECTT
T ss_pred             CCCCCEEEECCCCCCCCChHHhCcCcccCCCccc--cCCCCCC------------------cceEEEEEchhhEEECCCC
Confidence            9999999999999999999999999999998765  3655555                  9999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++++|| ++.+++|||+++ +.+++++|++|||+|+|++|++++|+|++.|+++|++++++++|+++++++|++.++|+
T Consensus       157 ~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~  234 (370)
T 4ej6_A          157 LDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDP  234 (370)
T ss_dssp             SCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECT
T ss_pred             CCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECC
Confidence            9999998 556899999987 78899999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCcccHHHHHHh---hcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEE
Q 017201          243 DDEPNKSISELVKG---ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       243 ~~~~~~~~~~~i~~---~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~  318 (375)
                      .+   .++.+.+++   ++++ ++|+|||++|+...++.++++++++ |+++.+|.... ....++...++.+++++.|+
T Consensus       235 ~~---~~~~~~i~~~~~~~~g-g~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  309 (370)
T 4ej6_A          235 SA---GDVVEAIAGPVGLVPG-GVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGS  309 (370)
T ss_dssp             TS---SCHHHHHHSTTSSSTT-CEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEEC
T ss_pred             CC---cCHHHHHHhhhhccCC-CCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEe
Confidence            87   788888888   7777 9999999999877899999999997 99999997764 46688888888899999998


Q ss_pred             eeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe--eEEEEe
Q 017201          319 TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC--VKVLIT  374 (375)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvi~  374 (375)
                      ...    ..+++++++++++|++++.++++++|||+++++|++.+.+++.  .|++++
T Consensus       310 ~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~  363 (370)
T 4ej6_A          310 FIN----PFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPS  363 (370)
T ss_dssp             CSC----TTCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC
T ss_pred             ccC----hHHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEc
Confidence            643    3579999999999999998999999999999999999987764  477765

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.4e-59  Score=443.03  Aligned_cols=339  Identities=23%  Similarity=0.331  Sum_probs=300.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCC-CCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEP-PKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~-~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||++++++| .++++|+|+|+ +++|||||||.++|||++|++ +.|..+ ..+|.++|||++|+|+++|++|+++++|
T Consensus         1 MkAvv~~~~g-~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDG-IVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSS-CEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCC-CEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            8999999998 59999999998 579999999999999999999 877654 5689999999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|++.+...|+.|.+|+.|+++.|.+...  .|...+|                  +|+||++++++.++++|++++++
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~iP~~l~~~  138 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDF--IGSRRDG------------------GFAEYIVVKRKNVFALPTDMPIE  138 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEE--BTTTBCC------------------SSBSEEEEEGGGEEECCTTSCGG
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCccc--ccCCCCc------------------ccccccccchheEEECCCCCCHH
Confidence            999999999999999999999999998776  3666665                  99999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +||+++ .++++++ +....++++|++|||+|+|++|++++|+|+++|+..+++++++++|+++++++|++.++|+.+  
T Consensus       139 ~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~--  214 (346)
T 4a2c_A          139 DGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--  214 (346)
T ss_dssp             GGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT--
T ss_pred             HHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC--
Confidence            999876 4555555 567889999999999999999999999999999977889999999999999999999999988  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC--ccccchHHHhhcCCceEEEEeeccc-
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD--AMVPLNVIALACGGRTLKGTTFGGI-  323 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-  323 (375)
                       .+..+.++.++++.++|+|+|++|++..++.++++++++ |+++.+|....  ....++...++.|++++.|++.... 
T Consensus       215 -~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~  292 (346)
T 4a2c_A          215 -MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSS  292 (346)
T ss_dssp             -SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCS
T ss_pred             -CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccC
Confidence             778888888888889999999999988899999999998 99999998764  2234455567779999999864322 


Q ss_pred             -cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 -KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                       ...++++++++++.+|++++.++++++|||+++++|++.+.+++. +|+||.+
T Consensus       293 ~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          293 PWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             STTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             cchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence             123468899999999999999999999999999999999988876 5999864

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=2.4e-59  Score=440.28  Aligned_cols=333  Identities=28%  Similarity=0.467  Sum_probs=301.6

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      +|||+++++++++++++++|.|+|++|||+|||.+++||++|++ +.|.++. +.+|.++|||++|+|+++|++|++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            69999999988889999999999999999999999999999999 8887764 578999999999999999999999999


Q ss_pred             CCEEE-eeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           86 GDIVI-PTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        86 Gd~V~-~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      ||||+ ..+..+|+.|.+|++|+++.|++...  .|+..+|                  +|+||++++++.++++|++++
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~iP~~~~  141 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQN--TGYSVNG------------------GYGEYVVADPNYVGLLPDKVG  141 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEE--BTTTBCC------------------SSBSEEEECTTTSEECCTTSC
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCccccc--cCCCCCC------------------cceeEEEechHHEEECCCCCC
Confidence            99995 56788999999999999999998765  3665555                  999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +++||++++++.|||+++ +..++++|++|||+|+|++|++++|+|++.|+ +|++++++++|+++++++|++.++++.+
T Consensus       142 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~  219 (340)
T 3s2e_A          142 FVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD  219 (340)
T ss_dssp             HHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC
Confidence            999999999999999987 67899999999999999999999999999999 9999999999999999999999999887


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                         .++.+.+++ +.+ ++|++||++++.+.++.++++++++ |+++.+|... ....++...++.+++++.++...   
T Consensus       220 ---~~~~~~~~~-~~g-~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~---  289 (340)
T 3s2e_A          220 ---TDPAAWLQK-EIG-GAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPP-GDFGTPIFDVVLKGITIRGSIVG---  289 (340)
T ss_dssp             ---SCHHHHHHH-HHS-SEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCS-SEEEEEHHHHHHTTCEEEECCSC---
T ss_pred             ---cCHHHHHHH-hCC-CCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCC-CCCCCCHHHHHhCCeEEEEEecC---
Confidence               788888888 445 8999999999888999999999997 9999999876 45677777888899999998643   


Q ss_pred             CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          325 TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..++++++++++++|++++.   .++++|+++++|++.+++++. +|+||++
T Consensus       290 ~~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          290 TRSDLQESLDFAAHGDVKAT---VSTAKLDDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             CHHHHHHHHHHHHTTSCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CHHHHHHHHHHHHhCCCCce---EEEEeHHHHHHHHHHHHcCCCceEEEEec
Confidence            24678999999999999863   468899999999999998887 5999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-59  Score=445.32  Aligned_cols=335  Identities=23%  Similarity=0.356  Sum_probs=294.9

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCC-CCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEP-PKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~-~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      .+.+|||+++.+++++++++++|.|+ |+++||+|||.+++||++|++ +.|.++   ...+|.++|||++|+|+++|++
T Consensus        12 ~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           12 GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            35689999999998779999999999 999999999999999999999 888764   3468999999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV  159 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  159 (375)
                      |+++++||||+..+..+|+.|++|++|++++|++...  .|+..+|                  +|+||++++++.++++
T Consensus        92 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~~~G------------------~~aey~~v~~~~~~~i  151 (359)
T 1h2b_A           92 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF--PGLNIDG------------------GFAEFMRTSHRSVIKL  151 (359)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC--BTTTBCC------------------SSBSEEEECGGGEEEC
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc--cccCCCC------------------cccceEEechHhEEEC
Confidence            9999999999999999999999999999999997654  3544444                  9999999999999999


Q ss_pred             CCCCCccccc---ccccchhhhhhhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhc
Q 017201          160 DPSIDPSDAS---FLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAF  234 (375)
Q Consensus       160 p~~~~~~~aa---~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~l  234 (375)
                      |+++++++||   ++++++.|||+++.+. +++++|++|||+|+|++|++++|+||++ |+ +|++++++++|+++++++
T Consensus       152 P~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~l  230 (359)
T 1h2b_A          152 PKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERL  230 (359)
T ss_dssp             CTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHT
T ss_pred             CCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHh
Confidence            9999999999   7888899999987655 8999999999999999999999999999 99 899999999999999999


Q ss_pred             CCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChh--hHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCC
Q 017201          235 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS--LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGG  312 (375)
Q Consensus       235 g~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~--~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~  312 (375)
                      |+++++|+++   + +.+.++++++++++|+|||++|++.  .++.++++  ++ |+++.+|.... . .++...++.++
T Consensus       231 Ga~~vi~~~~---~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~-~-~~~~~~~~~~~  301 (359)
T 1h2b_A          231 GADHVVDARR---D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGE-L-RFPTIRVISSE  301 (359)
T ss_dssp             TCSEEEETTS---C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSC-C-CCCHHHHHHTT
T ss_pred             CCCEEEeccc---h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCC-C-CCCHHHHHhCC
Confidence            9999999887   5 7888888888778999999999986  78888888  76 99999997753 3 67777778899


Q ss_pred             ceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          313 RTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +++.++...   ...+++++++++.+|++++  .+ ++|||+++++|++.+.+++. +|+||++
T Consensus       302 ~~i~g~~~~---~~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          302 VSFEGSLVG---NYVELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             CEEEECCSC---CHHHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             cEEEEecCC---CHHHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            999987643   2356889999999999984  46 89999999999999998876 6999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.9e-59  Score=442.36  Aligned_cols=340  Identities=25%  Similarity=0.374  Sum_probs=290.3

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccC-CCC--CCCCCcccCcceeEEEEEeCCCCC
Q 017201            6 AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSE-GFP--APLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g-~~~--~~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      +++|||+++.+++..++++++|.|+|+++||+|||.+++||++|++ +.| .++  ...+|.++|||++|+|+++|++|+
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            4479999999988679999999999999999999999999999999 887 432  246799999999999999999999


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      ++++||||++.+..+|+.|++|++|++++|++...  +|...+|                  +|+||++++++.++++|+
T Consensus        82 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~iP~  141 (348)
T 2d8a_A           82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI--FGVDTDG------------------VFAEYAVVPAQNIWKNPK  141 (348)
T ss_dssp             SCCTTCEEEECCEECCSCCC------------CEE--TTTSSCC------------------SSBSEEEEEGGGEEECCT
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe--ecCCCCC------------------cCcceEEeChHHeEECCC
Confidence            99999999999999999999999999999998654  3544444                  999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      ++++++||+++ ++.|||+++ +.+++ +|++|||+|+|++|++++|+|+..|+++|++++++++++++++++|++.+++
T Consensus       142 ~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~  218 (348)
T 2d8a_A          142 SIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVIN  218 (348)
T ss_dssp             TSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred             CCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEC
Confidence            99999999886 788999987 67889 9999999999999999999999999878999999999999999999999999


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH-HHhhcCCceEEEEee
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTF  320 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~  320 (375)
                      +.+   +++.+.+++++++.++|+|||++|..+.++.++++++++ |+++.+|.... ...++. ..++.+++++.++..
T Consensus       219 ~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~  293 (348)
T 2d8a_A          219 PFE---EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPG-KVTIDFNNLIIFKALTIYGITG  293 (348)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS-CCCCCHHHHTTTTTCEEEECCC
T ss_pred             CCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC-CcccCchHHHHhCCcEEEEecC
Confidence            877   688889999888879999999999877899999999997 99999998763 556777 677789999998753


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCCCcceeeEee-cccHHHHHHHHcCCCeeEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ..  ..++++++++++++|++++.++++++|| |+++++|++.++++..+|+||++
T Consensus       294 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~  347 (348)
T 2d8a_A          294 RH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFML  347 (348)
T ss_dssp             CC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC
T ss_pred             CC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEee
Confidence            31  1356889999999999988888999999 99999999999875557999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.9e-59  Score=444.80  Aligned_cols=344  Identities=24%  Similarity=0.303  Sum_probs=298.7

Q ss_pred             CCCCccceeeEEEEecCCCCeEEEEeecC--------CCCCCeEEEEEeeeecCCCccc-ccCCC---CCCCCCcccCcc
Q 017201            1 MSNSQAITCKAVVCWGLGEPLKVEEIQVE--------PPKSTEVRVKMLYASVCHTDIL-CSEGF---PAPLYPRVLGHE   68 (375)
Q Consensus         1 m~~~~~~~~~a~~~~~~~~~l~~~~~~~p--------~~~~~ev~V~v~~~~i~~~D~~-~~g~~---~~~~~p~i~G~e   68 (375)
                      |+.+.+++|||+++.+++ .++++++|.|        +|+++||+|||.+++||++|++ +.++.   ....+|.++|||
T Consensus         1 m~~~~~~~mka~~~~~~~-~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E   79 (363)
T 3m6i_A            1 MASSASKTNIGVFTNPQH-DLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHE   79 (363)
T ss_dssp             ----CCSCCEEEEECTTC-CEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCE
T ss_pred             CCCCCcccceeEEEeCCC-cEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcc
Confidence            677778899999999887 5999999999        9999999999999999999999 76432   224679999999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceee
Q 017201           69 GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSE  147 (375)
Q Consensus        69 ~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~  147 (375)
                      ++|+|+++|++|++|++||||++.+..+|+.|++|++|+++.|++....  |.. .+                  |+|+|
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~--g~~~~~------------------G~~ae  139 (363)
T 3m6i_A           80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFL--STPPVP------------------GLLRR  139 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET--TSTTSC------------------CSCBS
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcccc--CCCCCC------------------cccee
Confidence            9999999999999999999999999999999999999999999987653  332 23                  49999


Q ss_pred             eEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017201          148 YMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK  227 (375)
Q Consensus       148 ~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~  227 (375)
                      |++++++.++++|+ +++++||++. +++|||+++ +.+++++|++|||+|+|++|++++|+||.+|+++|++++++++|
T Consensus       140 y~~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~  216 (363)
T 3m6i_A          140 YVNHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGR  216 (363)
T ss_dssp             EEEEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred             EEEEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHH
Confidence            99999999999999 9999999885 788999987 78899999999999999999999999999999559999999999


Q ss_pred             HHHhhhcCCcEEeCCC--CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH
Q 017201          228 KEKGKAFGMTDFINPD--DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV  305 (375)
Q Consensus       228 ~~~~~~lg~~~v~~~~--~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~  305 (375)
                      +++++++ ++.++++.  +...+++.+.+++++++.++|+|||++|++..++.++++++++ |+++.+|... ....++.
T Consensus       217 ~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~  293 (363)
T 3m6i_A          217 LKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGK-NEIQIPF  293 (363)
T ss_dssp             HHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCC-SCCCCCH
T ss_pred             HHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCC-CCccccH
Confidence            9999999 65554432  1012678889999998889999999999987899999999998 9999999776 3556777


Q ss_pred             HHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC-Ce-eEEEEeC
Q 017201          306 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP-DC-VKVLITI  375 (375)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~-~kvvi~~  375 (375)
                      ..++.+++++.++...    .++++++++++++|++++.++++++|||+++++||+.+.++ .. +|+||+.
T Consensus       294 ~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          294 MRASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             HHHHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             HHHHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEec
Confidence            7888899999987532    67899999999999999889999999999999999999886 33 6999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3e-59  Score=440.12  Aligned_cols=336  Identities=26%  Similarity=0.354  Sum_probs=299.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++.+++++++++++|.|+|+++||+|||.+++||++|++ +.|.++   ...+|.++|||++|+|+++|++|++++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            7999999998669999999999999999999999999999999 888654   356799999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||||++.+..+|+.|++|++|++++|++...  +|+..+|                  +|+||++++++.++++|++++
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~iP~~~~  140 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQI--LGVDRDG------------------GFAEYVVVPAENAWVNPKDLP  140 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE--BTTTBCC------------------SSBSEEEEEGGGEEEECTTSC
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcce--ecCCCCC------------------cceeEEEEchHHeEECCCCCC
Confidence            99999999999999999999999999998664  2544444                  999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +++||++. ++.|||+++.+.+++ +|++|||+|+|++|++++|+|+..|+++|++++++++++++++++ ++.++++.+
T Consensus       141 ~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~  217 (343)
T 2dq4_A          141 FEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE  217 (343)
T ss_dssp             HHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT
T ss_pred             HHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc
Confidence            99999884 778999988557889 999999999999999999999999986899999999999999999 999999887


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH-HHhhcCCceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  323 (375)
                         +++.+.+++++ +.++|+|||++|+.+.++.++++++++ |+++.+|... ....++. ..++.|++++.|+...  
T Consensus       218 ---~~~~~~~~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~--  289 (343)
T 2dq4_A          218 ---EDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPS-DPIRFDLAGELVMRGITAFGIAGR--  289 (343)
T ss_dssp             ---SCHHHHHHHHH-SSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCS-SCEEECHHHHTGGGTCEEEECCSC--
T ss_pred             ---cCHHHHHHHhc-CCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC-CCceeCcHHHHHhCceEEEEeecC--
Confidence               68888898888 668999999999976899999999997 9999999865 3566777 7777899999987532  


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ....+++++++++++|++++.++++++|||+++++|++.+.+++.+|+||++
T Consensus       290 ~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~  341 (343)
T 2dq4_A          290 RLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDP  341 (343)
T ss_dssp             CTTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEET
T ss_pred             CCHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEee
Confidence            1345789999999999988888899999999999999999877668999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=8.7e-59  Score=439.02  Aligned_cols=339  Identities=23%  Similarity=0.345  Sum_probs=297.4

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-C--CCCCCcccCcceeEEEEEeCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-P--APLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-~--~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ++|||+++.+++ .++++++|.|+|+++||+|||.++|||++|++ +.+.. .  ...+|.++|||++|+|+++|++|++
T Consensus         6 ~~mka~~~~~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            6 PNNLSLVVHGPG-DLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CCCEEEEEEETT-EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             cCceEEEEecCC-cEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            679999999986 59999999999999999999999999999999 77432 1  1357899999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      |++||||++.+..+|+.|++|++|+++.|++....  |.. .+                  |+|+||++++++.++++|+
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~------------------G~~aey~~v~~~~~~~iP~  144 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC--ATPPDD------------------GNLCRFYKHNAAFCYKLPD  144 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET--TBTTBC------------------CSCBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCcccc--CcCCCC------------------CccccEEEeehHHEEECcC
Confidence            99999999999999999999999999999986542  432 23                  4999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      ++++++||++ .++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.+++
T Consensus       145 ~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  222 (356)
T 1pl8_A          145 NVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ  222 (356)
T ss_dssp             TSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEc
Confidence            9999999876 4788999987 7889999999999999999999999999999878999999999999999999999998


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +++.+..++.+.+++.++ .++|+|||++|+...++.++++++++ |+++.+|... ....+++..++.+++++.++.. 
T Consensus       223 ~~~~~~~~~~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~-  298 (356)
T 1pl8_A          223 ISKESPQEIARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS-EMTTVPLLHAAIREVDIKGVFR-  298 (356)
T ss_dssp             CSSCCHHHHHHHHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC-SCCCCCHHHHHHTTCEEEECCS-
T ss_pred             CcccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCC-CCCccCHHHHHhcceEEEEecc-
Confidence            761001567788888877 58999999999887889999999998 9999999754 3556777778889999998753 


Q ss_pred             cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                         ...+++++++++++|++++.++++++|||+++++|++.+.++..+|+||++
T Consensus       299 ---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  349 (356)
T 1pl8_A          299 ---YCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKC  349 (356)
T ss_dssp             ---CSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             ---cHHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeC
Confidence               256899999999999998888899999999999999999888446999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=7e-59  Score=437.99  Aligned_cols=336  Identities=24%  Similarity=0.367  Sum_probs=296.8

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC--CCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA--PLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~--~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      |||+++++++++++++++|.|+|++|||+|||.+++||++|++ +.|..+.  ..+|.++|||++|+|+++|++|+++++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            8999999999889999999999999999999999999999999 8886542  568999999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccc-c--ccccCCCcccccccCcceecccccCceeeeEEee-cccEEEcCC
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIA-L--NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDP  161 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~--~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~lp~  161 (375)
                      ||+|++.+..+|+.|.+|++|++++|...... .  .|+..+                  |+|+||++++ ++.++++|+
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~------------------G~~aey~~v~~~~~~~~~p~  142 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSP------------------GSMAEYMIVDSARHLVPIGD  142 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBC------------------CSSBSEEEESCGGGEEECTT
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCC------------------ceeeEEEEecchhceEeCCC
Confidence            99999999999999999999999999432221 0  122233                  4999999999 999999999


Q ss_pred             CCCcccccccccchhhhhhhhhh-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWK-EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                       +++++||++++++.|||+++.+ ..++++|++|||+|+|++|++++|+|++.|..+|++++++++|+++++++|++.++
T Consensus       143 -~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i  221 (345)
T 3jv7_A          143 -LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAV  221 (345)
T ss_dssp             -CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred             -CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEE
Confidence             9999999999999999999866 45899999999999999999999999999544999999999999999999999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      ++++    ++.+.++++++++++|+|||++|++..++.++++++++ |+++.+|........++. .++.+++++.++..
T Consensus       222 ~~~~----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~  295 (345)
T 3jv7_A          222 KSGA----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVGF-FMIPFGASVVTPYW  295 (345)
T ss_dssp             ECST----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTTCCEEEST-TTSCTTCEEECCCS
T ss_pred             cCCC----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCcCH-HHHhCCCEEEEEec
Confidence            8754    68888999998889999999999987899999999997 999999987643556664 67779999998864


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .   ..++++++++++++|++++   ++++|+++++++||+.+.+++. +|+||++
T Consensus       296 ~---~~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          296 G---TRSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             C---CHHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             C---CHHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            4   2367899999999999986   3589999999999999988876 6999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.5e-58  Score=436.83  Aligned_cols=340  Identities=23%  Similarity=0.327  Sum_probs=297.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-c-cCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-C-SEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~-~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.++++ ++++++|.|+|+++||+|||.+++||++|++ + .|..+ ..+|.++|||++|+|+++|++|+++++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            89999999986 9999999999999999999999999999999 6 55544 4679999999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeecc--cEEEcCCCC
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSI  163 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lp~~~  163 (375)
                      |||++.+..+|+.|++|++|+++.|...... ..+...+                  |+|+||+++++.  .++++|+++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~------------------G~~aey~~v~~~~~~~~~iP~~~  140 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKD------------------GVFGEFFHVNDADMNLAHLPKEI  140 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBC------------------CSSBSCEEESSHHHHCEECCTTS
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccccCCC------------------CcccceEEeccccCeEEECCCCC
Confidence            9999999999999999999999999764321 0122223                  499999999976  999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++||+++.+++|||+++ +.+++++|++|||+|+|++|++++|+|++.|+++|++++++++|+++++++|++.+++++
T Consensus       141 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~  219 (352)
T 3fpc_A          141 PLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK  219 (352)
T ss_dssp             CHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGG
T ss_pred             CHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCC
Confidence            9999999999999999987 788999999999999999999999999999997899999999999999999999999988


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHH--hhcCCceEEEEee
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIA--LACGGRTLKGTTF  320 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~--~~~~~~~~~~~~~  320 (375)
                      +   .++.+.++++++++++|+|||++|+++.++.++++++++ |+++.+|.... ...+++...  +..+++++.++..
T Consensus       220 ~---~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  295 (352)
T 3fpc_A          220 N---GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC  295 (352)
T ss_dssp             G---SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCC
T ss_pred             C---cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeec
Confidence            7   789999999999889999999999977899999999997 99999997753 333444332  2347888888753


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCCCcceeeEee-cccHHHHHHHHcCCCe--eEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQLLKQPDC--VKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~--~kvvi~~  375 (375)
                      ..  ...+++++++++++|++++.++++++|+ |+++++||+.+.+++.  +|+||++
T Consensus       296 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          296 PG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             CC--HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             cC--chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            21  2346899999999999999889999999 9999999999987543  6999975

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.7e-58  Score=432.88  Aligned_cols=336  Identities=25%  Similarity=0.419  Sum_probs=294.6

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCC-CC--CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEG-FP--APLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~-~~--~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      +|||+++.+++ .++++++|.|+|+++||+|||.+++||++|++ +.++ .+  ...+|.++|||++|+|+++|++|+++
T Consensus         4 ~mka~~~~~~~-~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   82 (352)
T 1e3j_A            4 DNLSAVLYKQN-DLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHL   82 (352)
T ss_dssp             CCEEEEEEETT-EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSC
T ss_pred             cCEEEEEEcCC-cEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCC
Confidence            79999999987 59999999999999999999999999999999 7643 22  13579999999999999999999999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      ++||||++.+..+|+.|++|++|+++.|++....  |.. .+                  |+|+||++++++.++++|++
T Consensus        83 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~------------------G~~aey~~v~~~~~~~iP~~  142 (352)
T 1e3j_A           83 KKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATPPDD------------------GNLARYYVHAADFCHKLPDN  142 (352)
T ss_dssp             CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBTTBC------------------CSCBSEEEEEGGGEEECCTT
T ss_pred             CCCCEEEEcCcCCCCCChhhhCcCcccCCCCccc--CcCCCC------------------ccceeEEEeChHHeEECcCC
Confidence            9999999999999999999999999999986542  332 23                  49999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +++++||++ .++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++
T Consensus       143 ~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~  219 (352)
T 1e3j_A          143 VSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV  219 (352)
T ss_dssp             SCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence            999999876 4788999987 78899999999999999999999999999999 79999999999999999999999987


Q ss_pred             CCCCcccHHHHHHhhcC---CCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201          243 DDEPNKSISELVKGITH---GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      ++  ..++.+.+++.++   +.++|+|||++|+...++.++++++++ |+++.+|... ....+++..++.+++++.++.
T Consensus       220 ~~--~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~  295 (352)
T 1e3j_A          220 DP--AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS-QMVTVPLVNACAREIDIKSVF  295 (352)
T ss_dssp             CT--TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS-SCCCCCHHHHHTTTCEEEECC
T ss_pred             cc--cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC-CCccccHHHHHhcCcEEEEec
Confidence            62  1356677777765   568999999999887889999999997 9999999754 345677777888999999875


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC--eeEEEEeC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvi~~  375 (375)
                      .    ...+++++++++.+|++++.++++++|||+++++|++.+.+++  .+|+||++
T Consensus       296 ~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          296 R----YCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             S----CSSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             c----chHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEec
Confidence            3    2568999999999999988888999999999999999998776  46999975

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3e-58  Score=438.85  Aligned_cols=347  Identities=27%  Similarity=0.371  Sum_probs=299.0

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCC--
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVK--   81 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~--   81 (375)
                      ...+|||++++++++.++++++|.|+|+++||+|||.+++||++|++ +.|.++...+|.++|||++|+|+++| +|+  
T Consensus        14 ~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~   92 (380)
T 1vj0_A           14 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRD   92 (380)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBC
T ss_pred             hhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccccc
Confidence            44589999999998679999999999999999999999999999999 88876545689999999999999999 999  


Q ss_pred             ----CCCCCCEEEeeccCCCCCCchhh-ccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEe-eccc
Q 017201           82 ----EVKEGDIVIPTYIGECKECENCT-SEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANY  155 (375)
Q Consensus        82 ----~~~~Gd~V~~~~~~~~~~c~~~~-~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v-~~~~  155 (375)
                          +|++||||++.+..+|+.|++|+ +|++++|+....  .|...+..       .   .....|+|+||+++ +++.
T Consensus        93 ~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~--~g~~~~~~-------~---~~~~~G~~aey~~v~~~~~  160 (380)
T 1vj0_A           93 LNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV--YGINRGCS-------E---YPHLRGCYSSHIVLDPETD  160 (380)
T ss_dssp             TTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE--TTTTCCSS-------S---TTCCCSSSBSEEEECTTCC
T ss_pred             ccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce--eccccccC-------C---CCCCCccccceEEEcccce
Confidence                99999999999999999999999 999999997654  24310000       0   00012499999999 9999


Q ss_pred             EEEcCCCCCcc-cccccccchhhhhhhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          156 VVKVDPSIDPS-DASFLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       156 ~~~lp~~~~~~-~aa~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      ++++|++++++ +|++++ +++|||+++ +.++ +++|++|||+|+|++|++++|+|+..|+.+|++++++++|++++++
T Consensus       161 ~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~  238 (380)
T 1vj0_A          161 VLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE  238 (380)
T ss_dssp             EEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred             EEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence            99999999999 676666 999999987 5678 9999999999999999999999999994499999999999999999


Q ss_pred             cCCcEEeCCC---CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC-CccccchHHH-h
Q 017201          234 FGMTDFINPD---DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAMVPLNVIA-L  308 (375)
Q Consensus       234 lg~~~v~~~~---~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~-~  308 (375)
                      +|++.++++.   +   +++.+.+++++++.++|+|||++|++..++.++++++++ |+++.+|... .....++... +
T Consensus       239 lGa~~vi~~~~~~~---~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~  314 (380)
T 1vj0_A          239 IGADLTLNRRETSV---EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWL  314 (380)
T ss_dssp             TTCSEEEETTTSCH---HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHT
T ss_pred             cCCcEEEeccccCc---chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEchHHHH
Confidence            9999999887   5   678888999988878999999999876899999999997 9999999775 3345677777 7


Q ss_pred             hcCCceEEEEeeccccCCCCHHHHHHHHHc--CCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          309 ACGGRTLKGTTFGGIKTKSDLPTLLDKCKN--KEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      +.+++++.++...   ..++++++++++++  |+++  ++++++|||+++++|++.+.+++..|+||++
T Consensus       315 ~~~~~~i~g~~~~---~~~~~~~~~~l~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~  378 (380)
T 1vj0_A          315 VLKNATFKGIWVS---DTSHFVKTVSITSRNYQLLS--KLITHRLPLKEANKALELMESREALKVILYP  378 (380)
T ss_dssp             TTTTCEEEECCCC---CHHHHHHHHHHHHTCHHHHG--GGCCEEEEGGGHHHHHHHHHHTSCSCEEEEC
T ss_pred             HhCCeEEEEeecC---CHHHHHHHHHHHHhhcCCee--eEEEEEEeHHHHHHHHHHHhcCCCceEEEEe
Confidence            7899999997643   24578999999999  9885  6688999999999999999776544999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=4.2e-58  Score=433.11  Aligned_cols=336  Identities=24%  Similarity=0.402  Sum_probs=287.9

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      ++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++ +.|.++...+|.++|||++|+|+++|++|+++++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v   82 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI   82 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            589999999998889999999999999999999999999999999 9888777788999999999999999999999999


Q ss_pred             CCEEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           86 GDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        86 Gd~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      ||||++.+ ..+|+.|++|++|++++|+ ...  .++..+.    +.+    .+....|+|+||++++++.++++|++++
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~--~~~~~~~----~~~----~~~~~~G~~aey~~v~~~~~~~iP~~~~  151 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVV--FTYDCLD----SFH----DNEPHMGGYSNNIVVDENYVISVDKNAP  151 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCT-TCE--ESSSSEE----GGG----TTEECCCSSBSEEEEEGGGCEECCTTSC
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCc-ccc--ccccccc----ccc----cCCcCCccccceEEechhhEEECCCCCC
Confidence            99999865 4799999999999999998 332  1332220    000    0011125999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +++||++++++.|||+++. ..++++|++|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.++ .+.
T Consensus       152 ~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~~  228 (348)
T 3two_A          152 LEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TDP  228 (348)
T ss_dssp             HHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SSG
T ss_pred             HHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CCH
Confidence            9999999999999999875 5699999999999999999999999999999 999999999999999999999988 322


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc-chHHHhh-cCCceEEEEeecc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP-LNVIALA-CGGRTLKGTTFGG  322 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~  322 (375)
                         +.+        .. ++|+|||++|++..++.++++++++ |+++.+|........ ++...++ .+++++.++....
T Consensus       229 ---~~~--------~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  295 (348)
T 3two_A          229 ---KQC--------KE-ELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG  295 (348)
T ss_dssp             ---GGC--------CS-CEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC
T ss_pred             ---HHH--------hc-CCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC
Confidence               111        11 7999999999987899999999997 999999987622333 7777776 8999999986543


Q ss_pred             ccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          323 IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                         ..+++++++++++|++++.   .++||++++++|++.+.+++. +|+||++
T Consensus       296 ---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          296 ---IKETQEMVDFSIKHNIYPE---IDLILGKDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             ---HHHHHHHHHHHHHTTCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             ---HHHHHHHHHHHHhCCCCce---EEEEEHHHHHHHHHHHHcCCCceEEEEec
Confidence               3568999999999999863   479999999999999998887 6999974

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.2e-57  Score=429.12  Aligned_cols=336  Identities=26%  Similarity=0.400  Sum_probs=298.6

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|++ +.|.++. ..+|.++|||++|+|+++|++|++++
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            799999998865  8999999999999999999999999999999 8886653 46799999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||||++.+..+|+.|++|++|++++|++...  .|+..+|                  +|+||++++++.++++|++++
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~--~G~~~~G------------------~~aey~~v~~~~~~~~P~~~~  140 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI--LGEHRHG------------------TYAEYVVLPEANLAPKPKNLS  140 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE--TTTSSCC------------------SSBSEEEEEGGGEEECCTTSC
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccc--cCcCCCc------------------cceeEEEeChHHeEECCCCCC
Confidence            99999999999999999999999999998664  3544444                  999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.+++..
T Consensus       141 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~  219 (343)
T 2eih_A          141 FEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYT  219 (343)
T ss_dssp             HHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETT
T ss_pred             HHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCC
Confidence            99999999999999999876679999999999998 9999999999999999 999999999999999999999998887


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      +   .++.+.+.+.+++.++|++||++|. +.++.++++++++ |+++.+|........++...++.+++++.++...  
T Consensus       220 ~---~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~--  292 (343)
T 2eih_A          220 H---PDWPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMA--  292 (343)
T ss_dssp             S---TTHHHHHHHHTTTTCEEEEEESSCS-SSHHHHHHHEEEE-EEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSC--
T ss_pred             c---ccHHHHHHHHhCCCCceEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCCCcCccCHHHHHhCCcEEEEecCc--
Confidence            6   6788888888876789999999994 5899999999997 9999999776433346666777799999987532  


Q ss_pred             cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                       ..++++++++++.+|+++  ++++++|||+++++||+.+++++. +|+||++
T Consensus       293 -~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          293 -SKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             -CGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             -cHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence             346789999999999987  567899999999999999988765 6999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.4e-57  Score=426.33  Aligned_cols=332  Identities=28%  Similarity=0.456  Sum_probs=294.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++++++.+++++++|.|+|+++||+|||.+++||++|++ +.|.++. ..+|.++|||++|+|+++|++|+++++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            7999999998779999999999999999999999999999999 8887653 4679999999999999999999999999


Q ss_pred             CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      |||++.+. .+|+.|++|++|++++|++...  .|+..+|                  +|+||++++++.++++|+++++
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~~P~~~~~  140 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN--AGYSVDG------------------GYAEYCRAAADYVVKIPDNLSF  140 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEE--BTTTBCC------------------SSBSEEEEEGGGCEECCTTSCH
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCcce--eecCCCC------------------cceeeEEechHHEEECCCCCCH
Confidence            99998765 4699999999999999998654  2544444                  9999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++||++++++.|||+++.. .++++|++|||+|+|++|++++|+|+..|+ +|++++++++++++++++|++.++++.+ 
T Consensus       141 ~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~-  217 (339)
T 1rjw_A          141 EEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK-  217 (339)
T ss_dssp             HHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT-
T ss_pred             HHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC-
Confidence            9999999999999998754 589999999999998899999999999999 9999999999999999999999998876 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                        .++.+.+++.+ + ++|++||++|....++.++++++++ |+++.+|.... ...+++..++.+++++.++...   .
T Consensus       218 --~~~~~~~~~~~-~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~---~  288 (339)
T 1rjw_A          218 --EDAAKFMKEKV-G-GVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVG---T  288 (339)
T ss_dssp             --SCHHHHHHHHH-S-SEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS-EEEEEHHHHHHTTCEEEECCSC---C
T ss_pred             --ccHHHHHHHHh-C-CCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCC-CCccCHHHHHhCCcEEEEeccC---C
Confidence              67888888877 4 8999999999877899999999997 99999998764 4677777788899999987543   2


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .++++++++++.+|++++.   +++|||+++++|++.+.+++. +|+||++
T Consensus       289 ~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          289 RKDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            3568899999999999863   478999999999999988865 6999874

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.1e-57  Score=428.57  Aligned_cols=334  Identities=29%  Similarity=0.421  Sum_probs=299.7

Q ss_pred             eeEEEEecC-CCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGL-GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~-~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+. ...++++++|+|+|++|||||||.++|||++|++ +.|.++ .++|.++|||++|+|+++|++|+++++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeecccC
Confidence            899998653 3469999999999999999999999999999999 888765 4689999999999999999999999999


Q ss_pred             CEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           87 DIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        87 d~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      |||++.+. ..|+.|++|..+.++.|......  +...+|                  +|+||+.++++.++++|+++++
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~G------------------~~ae~~~~~~~~~~~iP~~~~~  139 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNA--GYSVDG------------------GMAEEAIVVADYAVKVPDGLDP  139 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB--TTTBCC------------------SSBSEEEEEGGGSCBCCTTSCH
T ss_pred             CeEeecccccccCccccccCCccccccccccc--ccccCC------------------cceeeccccccceeecCCCCCH
Confidence            99997765 56888999999999999987663  555555                  9999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++||++++++.|||+++ +.+++++|++|||+|+|++|.+++|+|+.++..+|++++++++|+++++++|++.++|+.+ 
T Consensus       140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~-  217 (348)
T 4eez_A          140 IEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD-  217 (348)
T ss_dssp             HHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C-
T ss_pred             HHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC-
Confidence            99999999999999976 5778999999999999999999999999875559999999999999999999999999988 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT  325 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (375)
                        .++.+.+++++++.++|++++++++...+..++.+++++ |+++.+|.+. ....++...++.+++++.|+..++   
T Consensus       218 --~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~gs~~~~---  290 (348)
T 4eez_A          218 --VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPN-TEMTLSVPTVVFDGVEVAGSLVGT---  290 (348)
T ss_dssp             --CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCS-CEEEECHHHHHHSCCEEEECCSCC---
T ss_pred             --CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccC-CCCccCHHHHHhCCeEEEEEecCC---
Confidence              789999999999999999999999998999999999997 9999999876 466778888888999999987543   


Q ss_pred             CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          326 KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +.+++++++++++|++++  + .++|||+++++|++.+++++. +|+||+|
T Consensus       291 ~~~~~~~~~l~~~g~i~p--~-~~~~~l~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          291 RLDLAEAFQFGAEGKVKP--I-VATRKLEEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             HHHHHHHHHHHHTTSCCC--C-EEEECGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCEE--E-EEEEeHHHHHHHHHHHHCCCCccEEEEEc
Confidence            457899999999999984  3 478999999999999999887 5999975

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.2e-57  Score=429.40  Aligned_cols=332  Identities=24%  Similarity=0.389  Sum_probs=272.1

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC--CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP--APLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~--~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      .+|||+++.+++++++++++|.|+|+++||+|||.+++||++|++ +.|.++  ...+|.++|||++|+|+++|++ +++
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            479999999998779999999999999999999999999999999 888765  3468999999999999999999 999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEee-cccEEEcCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDPS  162 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~lp~~  162 (375)
                      ++||||+..+..+|+.|++|++|++++|++...  +|...+|                  +|+||++++ ++.++++ ++
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~~~G------------------~~aey~~v~~~~~~~~i-~~  139 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII--PGQTTNG------------------GFSEYMLVKSSRWLVKL-NS  139 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC--BTTTBCC------------------SSBSEEEESCGGGEEEE-SS
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCccc--cccccCC------------------cceeeEEecCcccEEEe-CC
Confidence            999999988889999999999999999997644  3544444                  999999999 9999999 99


Q ss_pred             CCcccccccccchhhhhhhhhhh----cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhhcCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKE----AKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~----~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      +++++||++++++.|||+++...    +++ +|++|||+|+|++|++++|+|+..  |+ +|++++++++|+++++++|+
T Consensus       140 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa  217 (344)
T 2h6e_A          140 LSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGA  217 (344)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTC
T ss_pred             CCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCC
Confidence            99999999999999999987654    288 999999999999999999999999  99 89999999999999999999


Q ss_pred             cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201          237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK  316 (375)
Q Consensus       237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  316 (375)
                      +.++++.+   .  .+.+.+++++.++|+|||++|++..++.++++++++ |+++.+|.... ...++...++.|++++.
T Consensus       218 ~~vi~~~~---~--~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~i~  290 (344)
T 2h6e_A          218 DYVSEMKD---A--ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGK-RVSLEAFDTAVWNKKLL  290 (344)
T ss_dssp             SEEECHHH---H--HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS-CCCCCHHHHHHTTCEEE
T ss_pred             CEEecccc---c--hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCC-CcccCHHHHhhCCcEEE
Confidence            99987642   0  223445555668999999999987899999999997 99999998763 45677777878999999


Q ss_pred             EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ++...   ..++++++++++.+|++++  .+ ++|||+++++|++.+++++. +|+||++
T Consensus       291 g~~~~---~~~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          291 GSNYG---SLNDLEDVVRLSESGKIKP--YI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             ECCSC---CHHHHHHHHHHHHTTSSCC--CE-EEECC----------------CEEEECC
T ss_pred             EEecC---CHHHHHHHHHHHHcCCCCc--ce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            87543   2356889999999999985  36 89999999999999988875 6999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-57  Score=425.20  Aligned_cols=339  Identities=25%  Similarity=0.367  Sum_probs=298.5

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .|.+|||+++++++.+++++++|.|+|+++||+|||.+++||++|++ +.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            45689999999998779999999999999999999999999999999 8886652 467999999999999999999999


Q ss_pred             CCCCCEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +++||||++.+. .+|+.|++|++|++++|++...  .|+..+|                  +|+||++++++.++++|+
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~iP~  141 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDG------------------SFQQYATADAVQAAHIPQ  141 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE--BTTTBCC------------------SSBSEEEEETTTSEEECT
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCccccc--cccCCCC------------------cceeEEEeccccEEECCC
Confidence            999999998765 4699999999999999998654  2544444                  999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      ++++++||++++++.|||+++. ..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++
T Consensus       142 ~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~  219 (347)
T 2hcy_A          142 GTDLAQVAPILCAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFI  219 (347)
T ss_dssp             TCCHHHHGGGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEE
T ss_pred             CCCHHHHHHHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEE
Confidence            9999999999999999999875 458999999999998 9999999999999999 999999999999999999999888


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      |..+  .+++.+.+++.+.+ ++|++||++|....++.++++++++ |+++.+|...+...++++..++.+++++.++..
T Consensus       220 d~~~--~~~~~~~~~~~~~~-~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  295 (347)
T 2hcy_A          220 DFTK--EKDIVGAVLKATDG-GAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYV  295 (347)
T ss_dssp             ETTT--CSCHHHHHHHHHTS-CEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCTTCEEEEEHHHHHHTTCEEEECCC
T ss_pred             ecCc--cHhHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccC
Confidence            8763  25788888888877 8999999999876899999999997 999999987644567777778889999998754


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .   ...+++++++++++|++++.   +++|||+++++|++.+.+++. +|+||++
T Consensus       296 ~---~~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          296 G---NRADTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             C---CHHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             C---CHHHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCcceeEEEec
Confidence            3   23568899999999999863   469999999999999988765 6999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=4.9e-57  Score=428.01  Aligned_cols=336  Identities=24%  Similarity=0.279  Sum_probs=294.9

Q ss_pred             CccceeeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCC
Q 017201            4 SQAITCKAVVCWGLG-EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~-~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      +.+.+|||+++.+++ +.++++++|.|+|++|||+|||.++|||++|++ +.|.++. ..+|.++|||++|+|+++|++|
T Consensus        23 ~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v  102 (363)
T 3uog_A           23 MMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSV  102 (363)
T ss_dssp             CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             cCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCC
Confidence            456689999999764 469999999999999999999999999999999 8887653 5789999999999999999999


Q ss_pred             CCCCCCCEEEeeccCCCCCCchhhccCccccccccc--ccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201           81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI--ALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK  158 (375)
Q Consensus        81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~--~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  158 (375)
                      +++++||||++.+..      +|..|. +.|.....  ...|...+|                  +|+||++++++.+++
T Consensus       103 ~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G------------------~~aey~~v~~~~~~~  157 (363)
T 3uog_A          103 TRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPG------------------VLSEYVVLPEGWFVA  157 (363)
T ss_dssp             CSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCC------------------CCBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCC------------------cceeEEEechHHeEE
Confidence            999999999987654      567777 88874211  002333344                  999999999999999


Q ss_pred             cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+..|+ +|++++++++++++++++|++.
T Consensus       158 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  236 (363)
T 3uog_A          158 APKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADH  236 (363)
T ss_dssp             CCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSE
T ss_pred             CCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCE
Confidence            999999999999999999999998888999999999999999999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (375)
                      +++..+   +++.+.+++++++.++|+|||++|.. .++.++++++++ |+++.+|........++...++.+++++.++
T Consensus       237 vi~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  311 (363)
T 3uog_A          237 GINRLE---EDWVERVYALTGDRGADHILEIAGGA-GLGQSLKAVAPD-GRISVIGVLEGFEVSGPVGPLLLKSPVVQGI  311 (363)
T ss_dssp             EEETTT---SCHHHHHHHHHTTCCEEEEEEETTSS-CHHHHHHHEEEE-EEEEEECCCSSCEECCBTTHHHHTCCEEEEC
T ss_pred             EEcCCc---ccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhhcC-CEEEEEecCCCcccCcCHHHHHhCCcEEEEE
Confidence            998554   68999999999988999999999965 899999999997 9999999876545677777788899999998


Q ss_pred             eeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          319 TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                      ...   ..++++++++++++++++  ++++++|||+++++|++.+.+++.+|+||++
T Consensus       312 ~~~---~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  363 (363)
T 3uog_A          312 SVG---HRRALEDLVGAVDRLGLK--PVIDMRYKFTEVPEALAHLDRGPFGKVVIEF  363 (363)
T ss_dssp             CCC---CHHHHHHHHHHHHHHTCC--CCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred             ecC---CHHHHHHHHHHHHcCCCc--cceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence            644   245788999999999886  5688999999999999999888866999985

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.9e-57  Score=430.49  Aligned_cols=337  Identities=20%  Similarity=0.329  Sum_probs=289.4

Q ss_pred             CCCCccceeeEEEEecCCCCeEEEE--eecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeC
Q 017201            1 MSNSQAITCKAVVCWGLGEPLKVEE--IQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAG   77 (375)
Q Consensus         1 m~~~~~~~~~a~~~~~~~~~l~~~~--~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG   77 (375)
                      |+.  |.+|||+++.+++.++++++  +|.|+|+++||+|||.+++||++|++ +.|.++...+|.++|||++|+|+++|
T Consensus         1 M~~--p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG   78 (360)
T 1piw_A            1 MSY--PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLG   78 (360)
T ss_dssp             CCT--TTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEEC
T ss_pred             CCC--ChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeC
Confidence            553  45899999999887799999  99999999999999999999999999 88876655689999999999999999


Q ss_pred             CCCC-CCCCCCEEEeec-cCCCCCCchhhccCccccccc-ccc-c---ccccCCCcccccccCcceecccccCceeeeEE
Q 017201           78 DEVK-EVKEGDIVIPTY-IGECKECENCTSEMTNLCLKY-PIA-L---NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMV  150 (375)
Q Consensus        78 ~~v~-~~~~Gd~V~~~~-~~~~~~c~~~~~~~~~~c~~~-~~~-~---~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~  150 (375)
                      ++|+ ++++||||++.+ ..+|+.|++|++|++++|++. ... .   .|...+                  |+|+||++
T Consensus        79 ~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~------------------G~~aey~~  140 (360)
T 1piw_A           79 PKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ------------------GGYANYVR  140 (360)
T ss_dssp             TTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC------------------CSSBSEEE
T ss_pred             CCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCC------------------CcceeEEE
Confidence            9999 999999996544 578999999999999999875 111 0   022222                  49999999


Q ss_pred             eecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201          151 IDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  230 (375)
Q Consensus       151 v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~  230 (375)
                      ++++.++++|+++++++||++++++.|||+++.+ +++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++
T Consensus       141 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~  218 (360)
T 1piw_A          141 VHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKRED  218 (360)
T ss_dssp             EEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHH
T ss_pred             EchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHH
Confidence            9999999999999999999999999999998765 899999999999999999999999999999 89999999999999


Q ss_pred             hhhcCCcEEeCCCCCCcc-cHHHHHHhhcCCCCccEEEEccCC--hhhHHHHHHhcccCCeEEEEEccCCCccccchHHH
Q 017201          231 GKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGV--PSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA  307 (375)
Q Consensus       231 ~~~lg~~~v~~~~~~~~~-~~~~~i~~~~~~~g~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~  307 (375)
                      ++++|++.++++.+   . ++.+.+.    + ++|+|||++|.  +..++.++++++++ |+++.+|.... ...++...
T Consensus       219 ~~~lGa~~v~~~~~---~~~~~~~~~----~-~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~  288 (360)
T 1piw_A          219 AMKMGADHYIATLE---EGDWGEKYF----D-TFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-HEMLSLKP  288 (360)
T ss_dssp             HHHHTCSEEEEGGG---TSCHHHHSC----S-CEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-SCCEEECG
T ss_pred             HHHcCCCEEEcCcC---chHHHHHhh----c-CCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-ccccCHHH
Confidence            99999999998876   4 5655443    3 79999999998  55788999999997 99999997763 11566666


Q ss_pred             hhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeeccc--HHHHHHHHcCCCe-eEEEEeC
Q 017201          308 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE--IDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ++.+++++.++...   ...+++++++++.+|++++.  + ++|||++  +++|++.+.+++. +|+||++
T Consensus       289 ~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          289 YGLKAVSISYSALG---SIKELNQLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             GGCBSCEEEECCCC---CHHHHHHHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHhCCeEEEEEecC---CHHHHHHHHHHHHhCCCcce--E-EEEeccHhHHHHHHHHHHCCCCceEEEEec
Confidence            77899999987643   23568999999999999854  5 8999999  9999999987775 6999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=6e-57  Score=433.27  Aligned_cols=319  Identities=25%  Similarity=0.403  Sum_probs=283.5

Q ss_pred             CeEEEEeecCC-CCCCeEEEEEeeeecCCCccc-ccCCC------C-CCCCCcccCcceeEEEEEeCCCC------CCCC
Q 017201           20 PLKVEEIQVEP-PKSTEVRVKMLYASVCHTDIL-CSEGF------P-APLYPRVLGHEGVGVVESAGDEV------KEVK   84 (375)
Q Consensus        20 ~l~~~~~~~p~-~~~~ev~V~v~~~~i~~~D~~-~~g~~------~-~~~~p~i~G~e~~G~Vv~vG~~v------~~~~   84 (375)
                      .++++++|.|+ |+++||+|||.+++||++|++ +.|..      + ...+|.++|||++|+|+++|++|      ++|+
T Consensus        41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~  120 (404)
T 3ip1_A           41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE  120 (404)
T ss_dssp             EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred             ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence            47889999999 999999999999999999999 77642      1 24689999999999999999999      8899


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||||++.+..+|+.|++|++|++++|++...  .|+..+|                  +|+||++++++.++++|++++
T Consensus       121 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~g~~~~G------------------~~aey~~v~~~~~~~iP~~~~  180 (404)
T 3ip1_A          121 IGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE--LGFNVDG------------------AFAEYVKVDAKYAWSLRELEG  180 (404)
T ss_dssp             TTCEEEECSEECCSCSHHHHTTCGGGCTTCEE--BTTTBCC------------------SSBSEEEEEGGGEEECGGGBT
T ss_pred             CCCEEEECCccCCCCCHHHHCcCcccCccccc--cCCCCCC------------------CCcceEEechHHeEecccccc
Confidence            99999999999999999999999999998765  3665555                  999999999999999999886


Q ss_pred             c------ccccccccchhhhhhhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          165 P------SDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       165 ~------~~aa~l~~~~~ta~~~l~~~-~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      .      .++|+++.+++|||+++... +++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++
T Consensus       181 ~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~  260 (404)
T 3ip1_A          181 VYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD  260 (404)
T ss_dssp             TBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS
T ss_pred             ccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC
Confidence            3      45888888999999998655 4899999999999999999999999999998899999999999999999999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh-hhHHHHHHhc----ccCCeEEEEEccCCCccccchHHHhhcCC
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETT----KVGKGKVIVIGVGVDAMVPLNVIALACGG  312 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l----~~~~G~iv~~g~~~~~~~~~~~~~~~~~~  312 (375)
                      .++++.+   .++.+.++++++++++|+|||++|++ ..++.+++++    +++ |+++.+|.... ...++...++.++
T Consensus       261 ~vi~~~~---~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~-~~~~~~~~~~~~~  335 (404)
T 3ip1_A          261 HVIDPTK---ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADA-KIPLTGEVFQVRR  335 (404)
T ss_dssp             EEECTTT---SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCS-CEEECHHHHHHTT
T ss_pred             EEEcCCC---CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCC-CCcccHHHHhccc
Confidence            9999987   78999999999998999999999987 3566777777    997 99999998764 5578888888899


Q ss_pred             ceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC
Q 017201          313 RTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP  366 (375)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  366 (375)
                      +++.|+...  ....+++++++++++| +++.++++++|||+++++||+.+..+
T Consensus       336 ~~i~g~~~~--~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~~G  386 (404)
T 3ip1_A          336 AQIVGSQGH--SGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQTD  386 (404)
T ss_dssp             CEEEECCCC--CSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTTTC
T ss_pred             eEEEEecCC--CchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHhCC
Confidence            999997632  2246789999999999 98888899999999999999999844

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2.2e-56  Score=421.24  Aligned_cols=334  Identities=27%  Similarity=0.394  Sum_probs=295.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC--------CCCCCcccCcceeEEEEEeCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP--------APLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~--------~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      |||+++.+++.+++++++|.|+|+++||+|||.+++||++|++ +.|.++        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            7999999998779999999999999999999999999999999 887654        2467999999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeec-ccEEE
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVK  158 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~  158 (375)
                      |+++++||||+..+..+|+.|++|++|++++|++...  +|+..+|                  +|+||+++++ +.+++
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~~~G------------------~~aey~~v~~~~~~~~  140 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW--LGINFDG------------------AYAEYVIVPHYKYMYK  140 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE--BTTTBCC------------------SSBSEEEESCGGGEEE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc--ccccCCC------------------cceeEEEecCccceEE
Confidence            9999999999988889999999999999999998654  3544444                  9999999999 99999


Q ss_pred             cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCC
Q 017201          159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      + +++++++||++++++.|||+++. .+++++|++|||+|+ |++|++++|+|+.. |+ +|+++++++++++.++++|+
T Consensus       141 i-~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~  217 (347)
T 1jvb_A          141 L-RRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGA  217 (347)
T ss_dssp             C-SSSCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTC
T ss_pred             e-CCCCHHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCC
Confidence            9 99999999999999999999874 589999999999998 59999999999999 99 89999999999999999999


Q ss_pred             cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEE
Q 017201          237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLK  316 (375)
Q Consensus       237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~  316 (375)
                      +.+++..+   .++.+.+.+++...++|++||++|+...++.++++++++ |+++.+|...... .+++..++.+++++.
T Consensus       218 ~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~-~~~~~~~~~~~~~i~  292 (347)
T 1jvb_A          218 DYVINASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL-HYHAPLITLSEIQFV  292 (347)
T ss_dssp             SEEEETTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCC-CCCHHHHHHHTCEEE
T ss_pred             CEEecCCC---ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCC-CCCHHHHHhCceEEE
Confidence            99998876   677777887776228999999999887889999999997 9999999775223 677777777999999


Q ss_pred             EEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          317 GTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ++...   ..++++++++++++|+++  ++++++|||+++++|++.+++++. +|+||++
T Consensus       293 g~~~~---~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          293 GSLVG---NQSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             ECCSC---CHHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEecc---CHHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            87643   235688999999999987  558899999999999999988876 6999975

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.3e-57  Score=426.60  Aligned_cols=341  Identities=23%  Similarity=0.426  Sum_probs=283.7

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      +.++|+|+++.++++.++++++|.|+|+++||+|||.+++||++|++ +.|.++...+|.++|||++|+|+++|++|+++
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence            56789999998887889999999999999999999999999999999 88876555689999999999999999999999


Q ss_pred             CCCCEEEeecc-CCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           84 KEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        84 ~~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      ++||||++.+. .+|+.|++|++|++++|++......+.. ..|             ....|+|+||++++++.++++|+
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g-------------~~~~G~~aeyv~v~~~~~~~~P~  165 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIRH  165 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECCS
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCC-------------CCCCCcccceEEEcchhEEECCC
Confidence            99999998776 5699999999999999987531100000 000             01125999999999999999999


Q ss_pred             C-CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          162 S-IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       162 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      + +++++||++++++.|||+++.+ +++++|++|||+|+|++|++++|+|+..|+ +|++++++++++++++++|++.++
T Consensus       166 ~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi  243 (369)
T 1uuf_A          166 PQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVV  243 (369)
T ss_dssp             CGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEe
Confidence            9 9999999999999999998754 689999999999999999999999999999 799999999999999999999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      ++.+   .++.+   ++.  .++|+|||++|.+..++.++++++++ |+++.+|........++...++.+++++.++..
T Consensus       244 ~~~~---~~~~~---~~~--~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  314 (369)
T 1uuf_A          244 NSRN---ADEMA---AHL--KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMI  314 (369)
T ss_dssp             ETTC---HHHHH---TTT--TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC-------CHHHHHTTTCEEEECCS
T ss_pred             cccc---HHHHH---Hhh--cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCccccCHHHHHhCCcEEEEeec
Confidence            8876   44433   333  37999999999876789999999997 999999977532225677777889999998764


Q ss_pred             ccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..   .++++++++++++|++++.  + ++|||+++++|++.+.+++. +|+||++
T Consensus       315 ~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          315 GG---IPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             CC---HHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             CC---HHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            32   3568899999999999853  4 47999999999999988775 6999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=8e-57  Score=431.68  Aligned_cols=342  Identities=21%  Similarity=0.284  Sum_probs=294.5

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCC-CC-----CeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPP-KS-----TEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~-~~-----~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      +|||+++.+++ .++++++|.|+| ++     +||+|||.+++||++|++ +.|..+ ..+|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~~~~-~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTR-DLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETT-EEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCC-CEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            69999999986 599999999988 68     999999999999999999 887643 4679999999999999999999


Q ss_pred             CCCCCCCEEEeeccCCCCCCchhhccCcccccccccc------cccccCCCcccccccCcceecccccCceeeeEEeecc
Q 017201           81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA------LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN  154 (375)
Q Consensus        81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~------~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  154 (375)
                      ++|++||||++.+..+|+.|++|++|++++|++....      .+|+..               ....|+|+||++++++
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~---------------~~~~G~~aey~~v~~~  144 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDL---------------KGWSGGQAEYVLVPYA  144 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTB---------------SSCCCSSBSEEEESSH
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCcccccccccccccccc---------------CCCCceeeeeEEeccc
Confidence            9999999999999999999999999999999872110      012200               0012599999999987


Q ss_pred             --cEEEcCCCCCccc----ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          155 --YVVKVDPSIDPSD----ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       155 --~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                        .++++|+++++++    ||++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+
T Consensus       145 ~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  223 (398)
T 2dph_A          145 DYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL  223 (398)
T ss_dssp             HHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred             cCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence              8999999999998    888999999999998 688999999999999999999999999999987899999999999


Q ss_pred             HHhhhcCCcEEeCCCCCCcccH-HHHHHhhcCCCCccEEEEccCChh--------------hHHHHHHhcccCCeEEEEE
Q 017201          229 EKGKAFGMTDFINPDDEPNKSI-SELVKGITHGMGVDYCFECTGVPS--------------LLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       229 ~~~~~lg~~~v~~~~~~~~~~~-~~~i~~~~~~~g~d~vid~~g~~~--------------~~~~~~~~l~~~~G~iv~~  293 (375)
                      ++++++|++ ++++.+   .++ .+.+++++++.++|+|||++|+..              .++.++++++++ |+++.+
T Consensus       224 ~~a~~lGa~-~i~~~~---~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~  298 (398)
T 2dph_A          224 KLLSDAGFE-TIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIP  298 (398)
T ss_dssp             HHHHTTTCE-EEETTS---SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECC
T ss_pred             HHHHHcCCc-EEcCCC---cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEe
Confidence            999999996 888776   565 788888888878999999999752              689999999997 999999


Q ss_pred             ccCC------------CccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC--CCcceeeEeecccHHHH
Q 017201          294 GVGV------------DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK--LHQLLTHHVKLEEIDKA  359 (375)
Q Consensus       294 g~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a  359 (375)
                      |...            .....++...++.|++++.++...   ..+.++++++++.+|+++  +.++++++|||+++++|
T Consensus       299 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A  375 (398)
T 2dph_A          299 GIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDG  375 (398)
T ss_dssp             SCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHH
T ss_pred             ccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHH
Confidence            9762            123466777777899999876432   346789999999999998  87778999999999999


Q ss_pred             HHHHcCCCeeEEEEeC
Q 017201          360 IQLLKQPDCVKVLITI  375 (375)
Q Consensus       360 ~~~~~~~~~~kvvi~~  375 (375)
                      |+.+.+++.+|+||++
T Consensus       376 ~~~~~~~~~gKvvv~~  391 (398)
T 2dph_A          376 YAKFDKGSPAKFVIDP  391 (398)
T ss_dssp             HHHHHTTCSCEEEECT
T ss_pred             HHHHhcCCceEEEEec
Confidence            9999887768999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.1e-55  Score=417.89  Aligned_cols=339  Identities=23%  Similarity=0.401  Sum_probs=286.8

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      .+++|+++++.++.+.++++++|.|+|+++||+|||.++|||++|++ +.|.++...+|.++|||++|+|+++|++|++|
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~   85 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKF   85 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            46789999998887789999999999999999999999999999999 88876556789999999999999999999999


Q ss_pred             CCCCEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           84 KEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        84 ~~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      ++||||++.+. .+|+.|++|++|+++.|+.......+....|             ....|+|+||++++++.++++|++
T Consensus        86 ~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~~P~~  152 (357)
T 2cf5_A           86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYING-------------QPTQGGFAKATVVHQKFVVKIPEG  152 (357)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTS-------------CBCCCSSBSCEEEEGGGEEECCSS
T ss_pred             CCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCC-------------CCCCCccccEEEechhhEEECcCC
Confidence            99999987654 6899999999999999975433211110011             112359999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEe
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVE-KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFI  240 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~-~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~  240 (375)
                      +++++||++++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++ ++|++.++
T Consensus       153 ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi  230 (357)
T 2cf5_A          153 MAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYV  230 (357)
T ss_dssp             CCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEE
T ss_pred             CCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceee
Confidence            999999999999999999864 56888 99999999999999999999999999 9999999999999887 99999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc-chHHHhhcCCceEEEEe
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP-LNVIALACGGRTLKGTT  319 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~  319 (375)
                      ++.+   .   +.+++.++  ++|+|||++|.+..++.++++++++ |+++.+|.... ... +++. ++.+++++.++.
T Consensus       231 ~~~~---~---~~~~~~~~--g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~-~~~~~~~i~g~~  299 (357)
T 2cf5_A          231 IGSD---Q---AKMSELAD--SLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINN-PLQFLTPL-LMLGRKVITGSF  299 (357)
T ss_dssp             ETTC---H---HHHHHSTT--TEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSS-CCCCCHHH-HHHHTCEEEECC
T ss_pred             cccc---H---HHHHHhcC--CCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCC-CccccCHH-HHhCccEEEEEc
Confidence            8765   3   24455543  7999999999876789999999997 99999997653 333 6666 777999999876


Q ss_pred             eccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..   ..++++++++++.++++++.  + ++|||+++++|++.+++++. +|+||++
T Consensus       300 ~~---~~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          300 IG---SMKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             SC---CHHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEET
T ss_pred             cC---CHHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEeC
Confidence            43   23568899999999999853  4 69999999999999988776 6999864

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=4.5e-57  Score=427.41  Aligned_cols=330  Identities=22%  Similarity=0.246  Sum_probs=285.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCC---CcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLY---PRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~---p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++.+++++++++++|.|+|+++||+|||.++|||++|++ +.|.++...+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            7999999998779999999999999999999999999999999 8886654456   8999999999 9999999 9999


Q ss_pred             CCCEEEeeccCC--CCCCchhhccCcccccccccccccc-cCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           85 EGDIVIPTYIGE--CKECENCTSEMTNLCLKYPIALNGL-MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        85 ~Gd~V~~~~~~~--~~~c~~~~~~~~~~c~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +||||++.+..+  |+.|++|++|++++|++......|+ ..+                  |+|+||++++++.++++|+
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~------------------G~~aey~~v~~~~~~~iP~  140 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAH------------------GYMSEFFTSPEKYLVRIPR  140 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEEC------------------CSCBSEEEEEGGGEEECCG
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCC------------------cceeeEEEEchHHeEECCC
Confidence            999999988888  9999999999999999754310022 223                  4999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCC------CEEEEECCCHHHHHH-HHHH-HHcCCCeEEEEcCChh---hHHH
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKG------SSVAVLGLGTVGLGA-VDGA-RMHGAAKIIGIDKNPW---KKEK  230 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g------~~VlI~Gag~~G~~a-i~la-~~~G~~~V~~~~~~~~---~~~~  230 (375)
                      +++ ++ |+++.+++|||+++ +.+++++|      ++|||+|+|++|+++ +|+| |.+|+++|++++++++   |+++
T Consensus       141 ~~~-~~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~  217 (357)
T 2b5w_A          141 SQA-EL-GFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI  217 (357)
T ss_dssp             GGS-TT-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred             Ccc-hh-hhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence            999 54 55777999999988 67899999      999999999999999 9999 9999955999999999   9999


Q ss_pred             hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHh--
Q 017201          231 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL--  308 (375)
Q Consensus       231 ~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~--  308 (375)
                      ++++|++.+ ++++   +++.+ ++++ ++ ++|+|||++|++..++.++++++++ |+++.+|........++...+  
T Consensus       218 ~~~lGa~~v-~~~~---~~~~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~  289 (357)
T 2b5w_A          218 IEELDATYV-DSRQ---TPVED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSDWAFEVDAGAFHR  289 (357)
T ss_dssp             HHHTTCEEE-ETTT---SCGGG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCCCCCCCCHHHHHH
T ss_pred             HHHcCCccc-CCCc---cCHHH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCCCCceecHHHHhH
Confidence            999999999 8776   56766 7777 66 8999999999987889999999997 999999977533456777777  


Q ss_pred             --hcCCceEEEEeeccccCCCCHHHHHHHHHcC--CCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          309 --ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       309 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                        +.+++++.++...   ..++++++++++++|  ++ +.++++++|||+++++|++.+  +..+|+||++
T Consensus       290 ~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~  354 (357)
T 2b5w_A          290 EMVLHNKALVGSVNS---HVEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEF  354 (357)
T ss_dssp             HHHHTTCEEEECCCC---CHHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEEC
T ss_pred             HHHhCCeEEEEeccC---CHHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEe
Confidence              7799999987643   245789999999999  85 557788999999999999988  4557999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-56  Score=425.26  Aligned_cols=344  Identities=22%  Similarity=0.287  Sum_probs=289.9

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCC-CCe------EEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPK-STE------VRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~-~~e------v~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      +|||+++.+++ .++++++|.|+|+ ++|      |+|||.+++||++|++ +.|.++ ..+|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~~~~-~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYLGSG-KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEEETT-EEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEecCC-ceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            69999999887 5999999999996 888      9999999999999999 887653 357899999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccc----cccccCCCcccccccCcceecccccCceeeeEEeecc-
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA----LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-  154 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-  154 (375)
                      |++|++||||++.+..+|+.|++|++|++++|++....    .+|+...              ....|+|+||++++++ 
T Consensus        80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~--------------~~~~G~~aey~~v~~~~  145 (398)
T 1kol_A           80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDM--------------GDWTGGQAEYVLVPYAD  145 (398)
T ss_dssp             CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTS--------------CCBCCCSBSEEEESSHH
T ss_pred             CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccC--------------CCCCceeeeEEEecchh
Confidence            99999999999999899999999999999999875311    0121100              0012599999999986 


Q ss_pred             -cEEEcCCCCCccc----ccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201          155 -YVVKVDPSIDPSD----ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE  229 (375)
Q Consensus       155 -~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~  229 (375)
                       .++++|+++++++    +|++++++.|||+++. .+++++|++|||+|+|++|++++|+||++|+++|++++++++|++
T Consensus       146 ~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~  224 (398)
T 1kol_A          146 FNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLA  224 (398)
T ss_dssp             HHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHH
Confidence             8999999999888    7888989999999985 789999999999999999999999999999978999999999999


Q ss_pred             HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh---------------hhHHHHHHhcccCCeEEEEEc
Q 017201          230 KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---------------SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       230 ~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~---------------~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +++++|++ ++++.+  .+++.+.+++++++.++|+|||++|+.               ..++.++++++++ |+++.+|
T Consensus       225 ~a~~lGa~-~i~~~~--~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G  300 (398)
T 1kol_A          225 HAKAQGFE-IADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPG  300 (398)
T ss_dssp             HHHHTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECS
T ss_pred             HHHHcCCc-EEccCC--cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEec
Confidence            99999997 777765  134788899988887999999999975               2689999999997 9999999


Q ss_pred             cC-CCc-----------cccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC-CCcceeeEeecccHHHHHH
Q 017201          295 VG-VDA-----------MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK-LHQLLTHHVKLEEIDKAIQ  361 (375)
Q Consensus       295 ~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~  361 (375)
                      .. .+.           ...++...++.|++++.++...   ....++++++++.+|+++ +.++++++|+|+++++||+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~  377 (398)
T 1kol_A          301 LYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYG  377 (398)
T ss_dssp             CCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHH
T ss_pred             cccCCcccccccccccccccccHHHHhhcccEEEecccC---hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHH
Confidence            75 211           2355666677799999875321   234578899999999998 4456789999999999999


Q ss_pred             HHcCCCeeEEEEeC
Q 017201          362 LLKQPDCVKVLITI  375 (375)
Q Consensus       362 ~~~~~~~~kvvi~~  375 (375)
                      .+.+++.+|+||++
T Consensus       378 ~~~~~~~gKvvi~~  391 (398)
T 1kol_A          378 EFDAGVPKKFVIDP  391 (398)
T ss_dssp             HHHHTCSCEEEECT
T ss_pred             HHhCCCceEEEEEe
Confidence            99877668999864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.2e-54  Score=410.18  Aligned_cols=338  Identities=24%  Similarity=0.426  Sum_probs=283.4

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            6 AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      +|+++++...+..+.++++++|.|+|+++||+|||.++|||++|++ +.|.++...+|.++|||++|+|+++|++|++++
T Consensus        14 ~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~   93 (366)
T 1yqd_A           14 PVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVN   93 (366)
T ss_dssp             SEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcCC
Confidence            4455555555555679999999999999999999999999999999 888765556899999999999999999999999


Q ss_pred             CCCEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCC
Q 017201           85 EGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSI  163 (375)
Q Consensus        85 ~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~  163 (375)
                      +||||++.+. .+|+.|++|++|++++|+.......+....|             ....|+|+||++++++.++++|+++
T Consensus        94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~~P~~l  160 (366)
T 1yqd_A           94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDG-------------TITYGGYSNHMVANERYIIRFPDNM  160 (366)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTS-------------CBCCCSSBSEEEEEGGGCEECCTTS
T ss_pred             CCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCC-------------CcCCCccccEEEEchhhEEECCCCC
Confidence            9999987654 6899999999999999966543211111001             1123599999999999999999999


Q ss_pred             CcccccccccchhhhhhhhhhhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVE-KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFIN  241 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~-~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~  241 (375)
                      ++++||++++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+..|+ +|+++++++++++.++ ++|++.+++
T Consensus       161 s~~~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~  238 (366)
T 1yqd_A          161 PLDGGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLV  238 (366)
T ss_dssp             CTTTTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEE
T ss_pred             CHHHhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEe
Confidence            99999999999999999875 46788 99999999999999999999999999 9999999999998877 899999998


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +.+   .   +.+++.++  ++|+|||++|....++.++++++++ |+++.+|.... ...++...++.+++++.++...
T Consensus       239 ~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~  308 (366)
T 1yqd_A          239 SRD---Q---EQMQAAAG--TLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEK-PLELPAFSLIAGRKIVAGSGIG  308 (366)
T ss_dssp             TTC---H---HHHHHTTT--CEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSS-CEEECHHHHHTTTCEEEECCSC
T ss_pred             ccC---H---HHHHHhhC--CCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCC-CCCcCHHHHHhCCcEEEEecCC
Confidence            765   3   23455543  7999999999876789999999997 99999998763 4567777788899999987643


Q ss_pred             cccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEe
Q 017201          322 GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  374 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~  374 (375)
                      .   .++++++++++.+|++++.  + ++|||+++++|++.+.+++. +|+||+
T Consensus       309 ~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~  356 (366)
T 1yqd_A          309 G---MKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVID  356 (366)
T ss_dssp             C---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEEC
T ss_pred             C---HHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEE
Confidence            2   3468899999999999864  4 69999999999999988876 699986

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=9e-55  Score=424.30  Aligned_cols=344  Identities=19%  Similarity=0.189  Sum_probs=295.6

Q ss_pred             CccceeeEEEEecC---------------CCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-----------
Q 017201            4 SQAITCKAVVCWGL---------------GEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-----------   56 (375)
Q Consensus         4 ~~~~~~~a~~~~~~---------------~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-----------   56 (375)
                      +.|.+|||+++.++               ++.++++++|.|+|+++||+|||.++|||++|++ ..+..           
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            46789999999986               2469999999999999999999999999999987 43221           


Q ss_pred             --C----CCCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccc
Q 017201           57 --P----APLYP-RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM  129 (375)
Q Consensus        57 --~----~~~~p-~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~  129 (375)
                        .    ...+| .++|||++|+|+++|++|++|++||+|++.+. .|..|..|..++++.|+.....  |+..+     
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~--G~~~~-----  177 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIW--GFETN-----  177 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEET--TTTSS-----
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCcccccc--ccCCC-----
Confidence              0    12467 69999999999999999999999999998654 6888999999999999987764  55432     


Q ss_pred             cccCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhh--cCCCCCCEEEEECC-CHHHHHH
Q 017201          130 SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGSSVAVLGL-GTVGLGA  206 (375)
Q Consensus       130 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga-g~~G~~a  206 (375)
                                  .|+|+||++++++.++++|+++++++||++++++.|||+++...  +++++|++|||+|+ |++|+++
T Consensus       178 ------------~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~a  245 (456)
T 3krt_A          178 ------------FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYA  245 (456)
T ss_dssp             ------------SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHH
T ss_pred             ------------CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHH
Confidence                        14999999999999999999999999999999999999988654  78999999999998 9999999


Q ss_pred             HHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc--------------ccHHHHHHhhcCCCCccEEEEccCC
Q 017201          207 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN--------------KSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       207 i~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~--------------~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|+|+..|+ +|++++++++|+++++++|++.++++.+.+.              ..+.+.+++++++.++|+|||++|+
T Consensus       246 vqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          246 TQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            999999999 8999999999999999999999998876110              1245788888888899999999998


Q ss_pred             hhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEee
Q 017201          273 PSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK  352 (375)
Q Consensus       273 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (375)
                      . .+..++++++++ |+++.+|...+....++...++.+++++.|+...+.   .++.++++++++|+++  ++++++||
T Consensus       325 ~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~  397 (456)
T 3krt_A          325 E-TFGASVFVTRKG-GTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIH--PTLSKVYS  397 (456)
T ss_dssp             H-HHHHHHHHEEEE-EEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEE
T ss_pred             h-hHHHHHHHhhCC-cEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc--cceeEEEc
Confidence            4 899999999997 999999987655667787788889999999875432   4567899999999998  56889999


Q ss_pred             cccHHHHHHHHcCCCe-eEEEEeC
Q 017201          353 LEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       353 ~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      |+++++|++.+.+++. +|+||.+
T Consensus       398 l~~~~eA~~~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          398 LEDTGQAAYDVHRNLHQGKVGVLC  421 (456)
T ss_dssp             GGGHHHHHHHHHTTCSSSEEEEES
T ss_pred             HHHHHHHHHHHHhCCCCCcEEEEe
Confidence            9999999999988876 6998863

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2e-54  Score=421.32  Aligned_cols=343  Identities=19%  Similarity=0.190  Sum_probs=291.3

Q ss_pred             CccceeeEEEEecCC-------------CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-cc----------------
Q 017201            4 SQAITCKAVVCWGLG-------------EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CS----------------   53 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~-------------~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~----------------   53 (375)
                      +.|.||||+++.+++             +.++++++|.|+|++|||+|||.++|||++|++ ..                
T Consensus        20 ~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~   99 (447)
T 4a0s_A           20 PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQ   99 (447)
T ss_dssp             CCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTT
T ss_pred             CCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhccc
Confidence            568899999999987             359999999999999999999999999999985 32                


Q ss_pred             CCCCC-CCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccc
Q 017201           54 EGFPA-PLYP-RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV  131 (375)
Q Consensus        54 g~~~~-~~~p-~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~  131 (375)
                      +.+.. ..+| .++|||++|+|+++|++|++|++||||++.+...|+.|. |..+.++.|+.....  |+..+       
T Consensus       100 g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~~--G~~~~-------  169 (447)
T 4a0s_A          100 GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRAW--GFETN-------  169 (447)
T ss_dssp             CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEET--TTTSS-------
T ss_pred             CccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-ccccccccccccccc--cccCC-------
Confidence            11111 2456 699999999999999999999999999999988887776 556789999887663  55433       


Q ss_pred             cCcceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhh--hcCCCCCCEEEEECC-CHHHHHHHH
Q 017201          132 RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGL-GTVGLGAVD  208 (375)
Q Consensus       132 ~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga-g~~G~~ai~  208 (375)
                                .|+|+||++++++.++++|+++++++||++++++.|||+++..  .+++++|++|||+|+ |++|++++|
T Consensus       170 ----------~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~q  239 (447)
T 4a0s_A          170 ----------FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQ  239 (447)
T ss_dssp             ----------SCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHH
T ss_pred             ----------CCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHH
Confidence                      1499999999999999999999999999999999999998864  489999999999998 999999999


Q ss_pred             HHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc---------------ccHHHHHHhhcCCCCccEEEEccCCh
Q 017201          209 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN---------------KSISELVKGITHGMGVDYCFECTGVP  273 (375)
Q Consensus       209 la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~---------------~~~~~~i~~~~~~~g~d~vid~~g~~  273 (375)
                      +|++.|+ +|++++++++|+++++++|++.++++.+.+.               ..+.+.+++.+ +.++|+|||++|+.
T Consensus       240 la~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~  317 (447)
T 4a0s_A          240 FVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRV  317 (447)
T ss_dssp             HHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHH
T ss_pred             HHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCch
Confidence            9999999 8999999999999999999999887654100               11367788888 56899999999986


Q ss_pred             hhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeec
Q 017201          274 SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL  353 (375)
Q Consensus       274 ~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (375)
                       .++.++.+++++ |+++.+|...+....++...++.+++++.++....   ..+++++++++++|+++  ++++++|||
T Consensus       318 -~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l  390 (447)
T 4a0s_A          318 -TFGLSVIVARRG-GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVV--PAMSAVYPL  390 (447)
T ss_dssp             -HHHHHHHHSCTT-CEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEEEEEG
T ss_pred             -HHHHHHHHHhcC-CEEEEEecCCCcccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcc--cceeEEEcH
Confidence             889999999997 99999997765556777777888999999886443   24677899999999997  568899999


Q ss_pred             ccHHHHHHHHcCCCe-eEEEEeC
Q 017201          354 EEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       354 ~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +++++||+.+.+++. +|+||.+
T Consensus       391 ~~~~~A~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          391 AEAAEACRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             HHHHHHHHHHhcCCCceEEEEEe
Confidence            999999999988776 5998863

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.4e-53  Score=398.48  Aligned_cols=318  Identities=22%  Similarity=0.263  Sum_probs=279.7

Q ss_pred             CCCCccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeC
Q 017201            1 MSNSQAITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAG   77 (375)
Q Consensus         1 m~~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG   77 (375)
                      |+.+.|.+|||+++.+++.+  ++++++|.|+|++|||+|||.++|||++|++ +.|.++ ..+|.++|||++|+|+++|
T Consensus         1 M~~~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG   79 (334)
T 3qwb_A            1 MKCTIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKG   79 (334)
T ss_dssp             ----CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEEC
T ss_pred             CCCCCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEEC
Confidence            66667889999999998865  9999999999999999999999999999999 888765 4589999999999999999


Q ss_pred             CCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEee-cccE
Q 017201           78 DEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYV  156 (375)
Q Consensus        78 ~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~  156 (375)
                      ++|+++++||||++..                                                .|+|+||++++ ++.+
T Consensus        80 ~~v~~~~~GdrV~~~~------------------------------------------------~G~~aey~~v~~~~~~  111 (334)
T 3qwb_A           80 KGVTNFEVGDQVAYIS------------------------------------------------NSTFAQYSKISSQGPV  111 (334)
T ss_dssp             TTCCSCCTTCEEEEEC------------------------------------------------SSCSBSEEEEETTSSE
T ss_pred             CCCCCCCCCCEEEEee------------------------------------------------CCcceEEEEecCcceE
Confidence            9999999999998432                                                24999999999 9999


Q ss_pred             EEcCCCCCccc---ccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          157 VKVDPSIDPSD---ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       157 ~~lp~~~~~~~---aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      +++|+++++++   ||++++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++
T Consensus       112 ~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~  190 (334)
T 3qwb_A          112 MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAK  190 (334)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             EECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence            99999999999   88888899999999888889999999999995 9999999999999999 9999999999999999


Q ss_pred             hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCC
Q 017201          233 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGG  312 (375)
Q Consensus       233 ~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~  312 (375)
                      ++|++.++++.+   +++.+.+++.+++.++|++||++|+. .++.++++++++ |+++.+|...+....++...+..|+
T Consensus       191 ~~ga~~~~~~~~---~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~  265 (334)
T 3qwb_A          191 EYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVGKD-TFEISLAALKRK-GVFVSFGNASGLIPPFSITRLSPKN  265 (334)
T ss_dssp             HTTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEECCGGG-GHHHHHHHEEEE-EEEEECCCTTCCCCCBCGGGGTTTT
T ss_pred             HcCCcEEEeCCC---chHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhccC-CEEEEEcCCCCCCCCcchhhhhhCc
Confidence            999999999887   78999999999888999999999985 899999999997 9999999876544467777788899


Q ss_pred             ceEEEEeeccccC-CC----CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          313 RTLKGTTFGGIKT-KS----DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       313 ~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +++.++....+.. ..    .++++++++.+|++++.  ++++||++++++||+.+.+++. +|+||++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          266 ITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             CEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             eEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCCceEEEEec
Confidence            9999876554422 11    24678999999999964  8899999999999999988876 5999975

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=2.4e-53  Score=401.24  Aligned_cols=315  Identities=21%  Similarity=0.262  Sum_probs=278.4

Q ss_pred             ccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCC
Q 017201            5 QAITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      .|.+|||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|++ +.|.++. ..+|.++|||++|+|+++|++|
T Consensus        25 ~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v  104 (353)
T 4dup_A           25 LPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGV  104 (353)
T ss_dssp             CCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTC
T ss_pred             CChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCC
Confidence            5678999999997755  9999999999999999999999999999999 8887754 4579999999999999999999


Q ss_pred             CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      +++++||||+...                             .+                  |+|+||++++++.++++|
T Consensus       105 ~~~~vGdrV~~~~-----------------------------~~------------------G~~aey~~v~~~~~~~~P  137 (353)
T 4dup_A          105 SGYAVGDKVCGLA-----------------------------NG------------------GAYAEYCLLPAGQILPFP  137 (353)
T ss_dssp             CSCCTTCEEEEEC-----------------------------SS------------------CCSBSEEEEEGGGEEECC
T ss_pred             CCCCCCCEEEEec-----------------------------CC------------------CceeeEEEEcHHHcEeCC
Confidence            9999999998432                             22                  399999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v  239 (375)
                      +++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.+
T Consensus       138 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~  216 (353)
T 4dup_A          138 KGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRG  216 (353)
T ss_dssp             TTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEE
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEE
Confidence            999999999999999999999888899999999999965 9999999999999999 89999999999999999999999


Q ss_pred             eCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcccc-chHHHhhcCCceEEEE
Q 017201          240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP-LNVIALACGGRTLKGT  318 (375)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~~~~~~~~~~~~~  318 (375)
                      +++.+   .++.+.+++.+ +.++|++||++|++ .++.++++++++ |+++.+|...+.... ++...++.+++++.++
T Consensus       217 ~~~~~---~~~~~~~~~~~-~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~  290 (353)
T 4dup_A          217 INYRS---EDFAAVIKAET-GQGVDIILDMIGAA-YFERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGS  290 (353)
T ss_dssp             EETTT---SCHHHHHHHHH-SSCEEEEEESCCGG-GHHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEEC
T ss_pred             EeCCc---hHHHHHHHHHh-CCCceEEEECCCHH-HHHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEEE
Confidence            99887   78888998888 66999999999987 889999999997 999999977653333 7777788899999998


Q ss_pred             eeccccCC-------CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          319 TFGGIKTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       319 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ........       ..++++++++++|+++  ++++++|+++++++|++.+.+++. +|+||++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          291 TMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             eccccchhhhHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            75433110       0167789999999987  568899999999999999988876 5999975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=3.7e-54  Score=408.78  Aligned_cols=331  Identities=19%  Similarity=0.280  Sum_probs=278.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCC-CeEEEEEeeeecCCCccc-ccC--CCCCCCC---CcccCcceeEEEEEeCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKS-TEVRVKMLYASVCHTDIL-CSE--GFPAPLY---PRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~-~ev~V~v~~~~i~~~D~~-~~g--~~~~~~~---p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      |||+++.+++++++++++|.|+|++ +||+|||.++|||++|++ +.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            7999999988669999999999999 999999999999999999 888  5543456   89999999999999  66 8


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      +|++||||++.+..+|+.|++|++|++++|++......|+. .+                  |+|+||++++++.++++|
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~------------------G~~aey~~v~~~~~~~iP  139 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMD------------------GFMREWWYDDPKYLVKIP  139 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEEC------------------CSCBSEEEECGGGEEEEC
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCC------------------CceeEEEEechHHeEECc
Confidence            89999999999999999999999999999987543100222 22                  499999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhh--h--hcCCC--C-------CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh--
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAW--K--EAKVE--K-------GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP--  225 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~--~--~~~~~--~-------g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~--  225 (375)
                      ++++ ++|| ++.++.|||+++.  +  .++++  +       |++|||+|+|++|++++|+|+..|+ +|+++++++  
T Consensus       140 ~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~  216 (366)
T 2cdc_A          140 KSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPT  216 (366)
T ss_dssp             GGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCC
T ss_pred             CCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccc
Confidence            9999 7765 6678999999886  4  78898  8       9999999999999999999999999 999999998  


Q ss_pred             -hhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhH-HHHHHhcccCCeEEEEEccCCCccccc
Q 017201          226 -WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPL  303 (375)
Q Consensus       226 -~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~  303 (375)
                       +++++++++|++.+ + .+    ++.+.+.+ ++ .++|++||++|....+ +.++++++++ |+++.+|........+
T Consensus       217 ~~~~~~~~~~ga~~v-~-~~----~~~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~  287 (366)
T 2cdc_A          217 EVEQTVIEETKTNYY-N-SS----NGYDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSGSVPL  287 (366)
T ss_dssp             HHHHHHHHHHTCEEE-E-CT----TCSHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSCEEEE
T ss_pred             hHHHHHHHHhCCcee-c-hH----HHHHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCCcccc
Confidence             89999999999988 6 32    44555655 44 4899999999987678 9999999997 9999999876433567


Q ss_pred             hHHH---hhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC----CCcceeeEeecccHHHHHHH--HcCCCeeEEEEe
Q 017201          304 NVIA---LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK----LHQLLTHHVKLEEIDKAIQL--LKQPDCVKVLIT  374 (375)
Q Consensus       304 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~--~~~~~~~kvvi~  374 (375)
                      +...   ++.+++++.++...   ..++++++++++.+|+++    +.++++++|||+++++|++.  ++++..+|+||+
T Consensus       288 ~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~  364 (366)
T 2cdc_A          288 DYKTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRIL  364 (366)
T ss_dssp             EHHHHHHHHHTTCEEEECCCC---CHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEE
T ss_pred             ChhhhHHHHhcCcEEEEecCC---CHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEe
Confidence            7776   77899999987532   245789999999999977    66888999999999999999  564445799997


Q ss_pred             C
Q 017201          375 I  375 (375)
Q Consensus       375 ~  375 (375)
                      +
T Consensus       365 ~  365 (366)
T 2cdc_A          365 W  365 (366)
T ss_dssp             C
T ss_pred             c
Confidence            5

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.2e-52  Score=394.65  Aligned_cols=314  Identities=23%  Similarity=0.324  Sum_probs=269.5

Q ss_pred             CccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCC
Q 017201            4 SQAITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      ..|.+|||+++.+++.+  ++++++|.|+|++|||+|||.++|||++|++ +.|.++. ..+|.++|||++|+|+++|++
T Consensus        17 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~   96 (342)
T 4eye_A           17 QGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEG   96 (342)
T ss_dssp             -CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTT
T ss_pred             cCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCC
Confidence            45789999999987766  9999999999999999999999999999999 8887653 578999999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV  159 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  159 (375)
                      ++ |++||||++..                             .+                  |+|+||+.++++.++++
T Consensus        97 v~-~~vGDrV~~~~-----------------------------~~------------------G~~aey~~v~~~~~~~i  128 (342)
T 4eye_A           97 SG-IKPGDRVMAFN-----------------------------FI------------------GGYAERVAVAPSNILPT  128 (342)
T ss_dssp             SS-CCTTCEEEEEC-----------------------------SS------------------CCSBSEEEECGGGEEEC
T ss_pred             CC-CCCCCEEEEec-----------------------------CC------------------CcceEEEEEcHHHeEEC
Confidence            99 99999998542                             12                  39999999999999999


Q ss_pred             CCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          160 DPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       160 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.
T Consensus       129 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~  207 (342)
T 4eye_A          129 PPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADI  207 (342)
T ss_dssp             CTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSE
T ss_pred             CCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence            9999999999999999999999888899999999999998 9999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (375)
                      ++++.+    ++.+.+++.+++.++|++||++|++ .+..++++++++ |+++.+|...+....++...++.+++++.++
T Consensus       208 v~~~~~----~~~~~v~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~  281 (342)
T 4eye_A          208 VLPLEE----GWAKAVREATGGAGVDMVVDPIGGP-AFDDAVRTLASE-GRLLVVGFAAGGIPTIKVNRLLLRNASLIGV  281 (342)
T ss_dssp             EEESST----THHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEE-EEEEEC----------CCCCGGGTTCEEEEC
T ss_pred             EecCch----hHHHHHHHHhCCCCceEEEECCchh-HHHHHHHhhcCC-CEEEEEEccCCCCCccCHHHHhhcCCEEEEE
Confidence            987753    6888899999888999999999987 889999999997 9999999776433455666677799999998


Q ss_pred             eecccc--C----CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          319 TFGGIK--T----KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       319 ~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ....+.  .    .+.++++++++++| ++  ++++++|+++++++|++.+.+++. +|+||++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          282 AWGEFLRTHADYLYETQAGLEKLVAEG-MR--PPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             CHHHHHHHCTTHHHHHHHHHHHHHHTT-CC--CCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ehhhhhhcCHHHHHHHHHHHHHHHHcC-CC--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            754331  1    13477899999999 66  668899999999999999998887 5999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4e-52  Score=391.02  Aligned_cols=313  Identities=22%  Similarity=0.332  Sum_probs=271.4

Q ss_pred             ceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 017201            7 ITCKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         7 ~~~~a~~~~~~~~~---l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      ++|||+++.+++++   ++++++|.|+|++|||+|||.+++||++|++ +.|.++. ..+|.++|||++|+|+++|++|+
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence            58999999999987   9999999999999999999999999999999 8887654 57899999999999999999999


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      ++++||||+..                             ..+                  |+|+||++++++.++++|+
T Consensus        83 ~~~vGdrV~~~-----------------------------~~~------------------G~~aey~~v~~~~~~~vP~  115 (340)
T 3gms_A           83 RELIGKRVLPL-----------------------------RGE------------------GTWQEYVKTSADFVVPIPD  115 (340)
T ss_dssp             GGGTTCEEEEC-----------------------------SSS------------------CSSBSEEEEEGGGEEECCT
T ss_pred             CCCCCCEEEec-----------------------------CCC------------------ccceeEEEcCHHHeEECCC
Confidence            99999999732                             122                  4999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      ++++++||++++.++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.++
T Consensus       116 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~  194 (340)
T 3gms_A          116 SIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVI  194 (340)
T ss_dssp             TSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEE
T ss_pred             CCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEE
Confidence            99999999999999999999988999999999999998 6999999999999999 999999999999999999999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhh-cCCceEEEEe
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA-CGGRTLKGTT  319 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~  319 (375)
                      ++.+   .++.+.+++++++.++|++||++|++ ....++.+++++ |+++.+|.....  .++...+. ...+++....
T Consensus       195 ~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~~~~~~  267 (340)
T 3gms_A          195 DTST---APLYETVMELTNGIGADAAIDSIGGP-DGNELAFSLRPN-GHFLTIGLLSGI--QVNWAEIVTKAKVHANIFH  267 (340)
T ss_dssp             ETTT---SCHHHHHHHHTTTSCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTSC--CCCHHHHHHTSCCEEEECC
T ss_pred             eCCc---ccHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHHhcCC-CEEEEEeecCCC--CCCHHHhhhcccceEEEEE
Confidence            9887   78999999999888999999999987 556677999997 999999987543  33333333 2455555443


Q ss_pred             eccc-------cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC-e-eEEEEeC
Q 017201          320 FGGI-------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD-C-VKVLITI  375 (375)
Q Consensus       320 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvi~~  375 (375)
                      ...+       ...++++++++++++|++++.. ++++||++++++||+.+.+++ . +|+||++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          268 LRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             ehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            2211       1134678899999999999865 688999999999999999887 4 7999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=4.6e-52  Score=388.27  Aligned_cols=313  Identities=25%  Similarity=0.281  Sum_probs=275.9

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      |||+++++++.+  ++++++|.|+|++|||+|||.+++||++|++ +.|.++.+.+|.++|||++|+|+++|++|+++++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999998876  9999999999999999999999999999999 8888776678999999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||+|++...                            .+                  |+|+||+.++++.++++|+++++
T Consensus        82 GdrV~~~~~----------------------------~~------------------G~~aey~~v~~~~~~~~P~~~~~  115 (325)
T 3jyn_A           82 GDRVAYGTG----------------------------PL------------------GAYSEVHVLPEANLVKLADSVSF  115 (325)
T ss_dssp             TCEEEESSS----------------------------SS------------------CCSBSEEEEEGGGEEECCTTSCH
T ss_pred             CCEEEEecC----------------------------CC------------------ccccceEEecHHHeEECCCCCCH
Confidence            999984321                            11                  49999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      ++||++++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++++|++.++++.+
T Consensus       116 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~  194 (325)
T 3jyn_A          116 EQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH  194 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT
T ss_pred             HHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC
Confidence            9999999999999999888889999999999995 9999999999999999 9999999999999999999999999887


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  323 (375)
                         .++.+.+++.+++.++|++||++|+. .++.++++++++ |+++.+|........++...+..+ .+.+.+..+..+
T Consensus       195 ---~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (325)
T 3jyn_A          195 ---EDVAKRVLELTDGKKCPVVYDGVGQD-TWLTSLDSVAPR-GLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSY  269 (325)
T ss_dssp             ---SCHHHHHHHHTTTCCEEEEEESSCGG-GHHHHHTTEEEE-EEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHH
T ss_pred             ---ccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhcCC-CEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeee
Confidence               78999999999888999999999985 889999999997 999999987643346677677666 577766544433


Q ss_pred             cC-CCCH----HHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 KT-KSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .. +.++    +++++++.+|++++.  ++++||++++++||+.+.+++. +|+||.+
T Consensus       270 ~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          270 ANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             SCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            22 2333    478999999999975  6889999999999999998877 5999864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.5e-51  Score=388.04  Aligned_cols=311  Identities=23%  Similarity=0.241  Sum_probs=268.1

Q ss_pred             ceeeEEEEecCC-----CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 017201            7 ITCKAVVCWGLG-----EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         7 ~~~~a~~~~~~~-----~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      |+|||++++++|     +.++++++|.|+|++|||+|||.+++||++|++ +.|.  ...+|.++|||++|+|+++|++|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            589999999876     469999999999999999999999999999999 8776  35679999999999999999999


Q ss_pred             CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      +++++||+|+....                          ...+                  |+|+||++++++.++++|
T Consensus        79 ~~~~~GdrV~~~~~--------------------------~~~~------------------G~~aey~~v~~~~~~~iP  114 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS--------------------------PDQN------------------GSNAEYQLINERLVAKAP  114 (346)
T ss_dssp             CSCCTTCEEEECCC--------------------------TTSC------------------CSSBSEEEEEGGGEEECC
T ss_pred             CcCCCCCEEEEcCC--------------------------CCCC------------------cceeEEEEEChHHeEECC
Confidence            99999999985421                          1112                  499999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCC------CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVE------KGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~------~g~~VlI~G-ag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      +++++++||++++++.|||+++.+.++++      +|++|||+| +|++|++++|+|+..|+ +|+++++++++++++++
T Consensus       115 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~  193 (346)
T 3fbg_A          115 KNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKK  193 (346)
T ss_dssp             SSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHH
T ss_pred             CCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence            99999999999999999999988888988      999999995 59999999999999999 99999999999999999


Q ss_pred             cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCc
Q 017201          234 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR  313 (375)
Q Consensus       234 lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  313 (375)
                      +|++.++++.+    ++.+.+++. .+.++|+|||++|++..++.++++++++ |+++.++..   ...++...+..+++
T Consensus       194 lGa~~vi~~~~----~~~~~~~~~-~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~---~~~~~~~~~~~~~~  264 (346)
T 3fbg_A          194 MGADIVLNHKE----SLLNQFKTQ-GIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAF---ENDQDLNALKPKSL  264 (346)
T ss_dssp             HTCSEEECTTS----CHHHHHHHH-TCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCC---SSCBCGGGGTTTTC
T ss_pred             cCCcEEEECCc----cHHHHHHHh-CCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCC---CCCCccccccccce
Confidence            99999998864    677888887 5558999999999887789999999997 999988743   33456666777899


Q ss_pred             eEEEEeeccc---cC------CCCHHHHHHHHHcCCCCCCcceeeEe---ecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          314 TLKGTTFGGI---KT------KSDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       314 ~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ++.++.....   ..      .+.++++++++++|+++  +.++++|   |++++++|++.+.+++. +|+||++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          265 SFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQ--PTTTKVIEGLTTENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             EEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSC--CCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEE--CCccceecCCCHHHHHHHHHHHhcCCcceEEEEec
Confidence            9988654321   00      13467899999999998  4477777   99999999999999887 5999974

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.1e-52  Score=392.82  Aligned_cols=315  Identities=19%  Similarity=0.197  Sum_probs=269.2

Q ss_pred             CccceeeEEEEecC---C--CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeC
Q 017201            4 SQAITCKAVVCWGL---G--EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAG   77 (375)
Q Consensus         4 ~~~~~~~a~~~~~~---~--~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG   77 (375)
                      +.+++|||+++.++   +  +.++++++|.|+|+++||+|||.+++||++|++ +.|..+...+|.++|||++|+|+++|
T Consensus        18 ~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG   97 (363)
T 4dvj_A           18 LYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVG   97 (363)
T ss_dssp             -CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEEC
T ss_pred             hhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeC
Confidence            45779999999865   2  349999999999999999999999999999999 88887767789999999999999999


Q ss_pred             CCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEE
Q 017201           78 DEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV  157 (375)
Q Consensus        78 ~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  157 (375)
                      ++|+++++||||+..+                          +...+                  |+|+||++++++.++
T Consensus        98 ~~v~~~~vGdrV~~~~--------------------------~~~~~------------------G~~aey~~v~~~~~~  133 (363)
T 4dvj_A           98 PDVTLFRPGDEVFYAG--------------------------SIIRP------------------GTNAEFHLVDERIVG  133 (363)
T ss_dssp             TTCCSCCTTCEEEECC--------------------------CTTSC------------------CSCBSEEEEEGGGCE
T ss_pred             CCCCCCCCCCEEEEcc--------------------------CCCCC------------------ccceEEEEeCHHHee
Confidence            9999999999998542                          11122                  499999999999999


Q ss_pred             EcCCCCCcccccccccchhhhhhhhhhhcCCC-----CCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHH
Q 017201          158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE-----KGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEK  230 (375)
Q Consensus       158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-----~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~  230 (375)
                      ++|+++++++||++++++.|||+++.+.++++     +|++|||+|+ |++|++++|+||++ |+ +|++++++++|+++
T Consensus       134 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~  212 (363)
T 4dvj_A          134 RKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEW  212 (363)
T ss_dssp             ECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHH
T ss_pred             ECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            99999999999999999999999988888888     9999999985 99999999999985 77 99999999999999


Q ss_pred             hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhc
Q 017201          231 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC  310 (375)
Q Consensus       231 ~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~  310 (375)
                      ++++|++.++++.+    ++.+.++++ .+.++|+|||++|++..++.++++++++ |+++.+|..    ..++...+..
T Consensus       213 ~~~lGad~vi~~~~----~~~~~v~~~-~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~----~~~~~~~~~~  282 (363)
T 4dvj_A          213 VKSLGAHHVIDHSK----PLAAEVAAL-GLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDP----SAFDIMLFKR  282 (363)
T ss_dssp             HHHTTCSEEECTTS----CHHHHHHTT-CSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCC----SSCCGGGGTT
T ss_pred             HHHcCCCEEEeCCC----CHHHHHHHh-cCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCC----CccchHHHhh
Confidence            99999999999864    678888887 4559999999999887899999999998 999999643    3566677777


Q ss_pred             CCceEEEEeeccc---cC------CCCHHHHHHHHHcCCCCCCcceeeEe---ecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          311 GGRTLKGTTFGGI---KT------KSDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       311 ~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +++++.++.....   ..      .+.++++++++++|++++  .+++++   +++++++|++.+.+++. +|+||++
T Consensus       283 k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          283 KAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRT--TLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             TTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             ccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeec--cccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence            9999988654321   00      134678999999999985  466666   99999999999988887 5999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=4.1e-53  Score=399.18  Aligned_cols=321  Identities=17%  Similarity=0.172  Sum_probs=269.4

Q ss_pred             CCC-CccceeeEEEEe--c---CCCCeEEEEe---------ecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCc
Q 017201            1 MSN-SQAITCKAVVCW--G---LGEPLKVEEI---------QVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPR   63 (375)
Q Consensus         1 m~~-~~~~~~~a~~~~--~---~~~~l~~~~~---------~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~   63 (375)
                      |+. +.|.+|||++++  +   ..+.++++++         |.|+|++|||+|||.+++||++|++ +.|.++. ..+|.
T Consensus         2 Ms~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~   81 (349)
T 3pi7_A            2 MSPMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR   81 (349)
T ss_dssp             ---CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTS
T ss_pred             CCCCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCC
Confidence            666 357789999999  2   3345888888         9999999999999999999999999 8887653 46899


Q ss_pred             ccCcceeEEEEEeCCCC-CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceeccccc
Q 017201           64 VLGHEGVGVVESAGDEV-KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSC  142 (375)
Q Consensus        64 i~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  142 (375)
                      ++|||++|+|+++|++| ++|++||||++..                          |...+                  
T Consensus        82 v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------g~~~~------------------  117 (349)
T 3pi7_A           82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT--------------------------GLSNW------------------  117 (349)
T ss_dssp             BCCSEEEEEEEEECSSHHHHHHTTCEEEEEC--------------------------TTSSC------------------
T ss_pred             CccceEEEEEEEECCCccCCCCCCCEEEEec--------------------------cCCCC------------------
Confidence            99999999999999999 9999999998653                          22223                  


Q ss_pred             CceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCC-CEEEEECC-CHHHHHHHHHHHHcCCCeEEE
Q 017201          143 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG-SSVAVLGL-GTVGLGAVDGARMHGAAKIIG  220 (375)
Q Consensus       143 g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~  220 (375)
                      |+|+||++++++.++++|+++++++||++++.++|||+ +.+.++ ++| ++|||+|+ |++|++++|+|+..|+ +|++
T Consensus       118 G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~  194 (349)
T 3pi7_A          118 GSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIV  194 (349)
T ss_dssp             CSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEE
T ss_pred             ccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEE
Confidence            49999999999999999999999999999999999996 456667 777 68888855 9999999999999999 9999


Q ss_pred             EcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc
Q 017201          221 IDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM  300 (375)
Q Consensus       221 ~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~  300 (375)
                      ++++++|+++++++|++.++++++   .++.+.+++++++.++|++||++|++ .+..++++++++ |+++.+|......
T Consensus       195 ~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~  269 (349)
T 3pi7_A          195 TVRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFLDAVTGP-LASAIFNAMPKR-ARWIIYGRLDPDA  269 (349)
T ss_dssp             EESCGGGHHHHHHHTCSEEEETTS---TTHHHHHHHHHHHHCCCEEEESSCHH-HHHHHHHHSCTT-CEEEECCCSCCSC
T ss_pred             EeCCHHHHHHHHHcCCCEEEECCc---HHHHHHHHHHhcCCCCcEEEECCCCh-hHHHHHhhhcCC-CEEEEEeccCCCC
Confidence            999999999999999999999887   78999999998877999999999987 668999999998 9999999765555


Q ss_pred             ccchH-HHhhcCCceEEEEeecccc------CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEE
Q 017201          301 VPLNV-IALACGGRTLKGTTFGGIK------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI  373 (375)
Q Consensus       301 ~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi  373 (375)
                      ..++. ..++.|++++.++....+.      ..+.++++++++++|+++  +.++++|||+++++||+.+.++..+|+||
T Consensus       270 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvl  347 (349)
T 3pi7_A          270 TVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLAEAIAWVPAELTKPNGKVFI  347 (349)
T ss_dssp             CCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHHHHHHHHHHHHTSSSSCEEE
T ss_pred             CCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHHHHHHHHHHHhCCCCceEEE
Confidence            66777 7778899999998754321      124567788889999997  55889999999999999776666679999


Q ss_pred             eC
Q 017201          374 TI  375 (375)
Q Consensus       374 ~~  375 (375)
                      ++
T Consensus       348 ~p  349 (349)
T 3pi7_A          348 RP  349 (349)
T ss_dssp             EC
T ss_pred             eC
Confidence            75

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1e-51  Score=388.53  Aligned_cols=315  Identities=22%  Similarity=0.243  Sum_probs=269.1

Q ss_pred             CCCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC--CCCCcccCcceeEEEEEeC
Q 017201            1 MSNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA--PLYPRVLGHEGVGVVESAG   77 (375)
Q Consensus         1 m~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~--~~~p~i~G~e~~G~Vv~vG   77 (375)
                      |+. .|.+|||+++.+++++++++++|.|+|+++||+|||.+++||++|++ +.|..+.  ..+|.++|||++|+|+++|
T Consensus         1 Ms~-~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG   79 (343)
T 3gaz_A            1 MSL-TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVG   79 (343)
T ss_dssp             ------CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEEC
T ss_pred             CCC-CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEEC
Confidence            553 46689999999999889999999999999999999999999999999 8876532  5689999999999999999


Q ss_pred             CCCCCCCCCCEEEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccE
Q 017201           78 DEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYV  156 (375)
Q Consensus        78 ~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  156 (375)
                      ++|++|++||||++...                         |.. .+                  |+|+||++++++.+
T Consensus        80 ~~v~~~~vGdrV~~~~~-------------------------g~~~~~------------------G~~aey~~v~~~~~  116 (343)
T 3gaz_A           80 PEVDSFRVGDAVFGLTG-------------------------GVGGLQ------------------GTHAQFAAVDARLL  116 (343)
T ss_dssp             TTCCSCCTTCEEEEECC-------------------------SSTTCC------------------CSSBSEEEEEGGGE
T ss_pred             CCCCCCCCCCEEEEEeC-------------------------CCCCCC------------------cceeeEEEecHHHe
Confidence            99999999999985431                         110 12                  49999999999999


Q ss_pred             EEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201          157 VKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       157 ~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ .+++++++++++|
T Consensus       117 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lG  194 (343)
T 3gaz_A          117 ASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLG  194 (343)
T ss_dssp             EECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHT
T ss_pred             eeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcC
Confidence            9999999999999999999999999888899999999999996 9999999999999999 89999 8999999999999


Q ss_pred             CcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceE
Q 017201          236 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTL  315 (375)
Q Consensus       236 ~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  315 (375)
                      ++. ++ .+   .++.+.+++.+++.++|++||++|++ .++.++++++++ |+++.+|...    .++...+..+++++
T Consensus       195 a~~-i~-~~---~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~g~~~----~~~~~~~~~~~~~~  263 (343)
T 3gaz_A          195 ATP-ID-AS---REPEDYAAEHTAGQGFDLVYDTLGGP-VLDASFSAVKRF-GHVVSCLGWG----THKLAPLSFKQATY  263 (343)
T ss_dssp             SEE-EE-TT---SCHHHHHHHHHTTSCEEEEEESSCTH-HHHHHHHHEEEE-EEEEESCCCS----CCCCHHHHHTTCEE
T ss_pred             CCE-ec-cC---CCHHHHHHHHhcCCCceEEEECCCcH-HHHHHHHHHhcC-CeEEEEcccC----ccccchhhhcCcEE
Confidence            998 76 44   67888999999888999999999985 889999999997 9999998664    34555666799999


Q ss_pred             EEEeeccc--------cCCCCHHHHHHHHHcCCCCCCccee-eEeecccHHHHHHHHcCCCe-----eEEEEe
Q 017201          316 KGTTFGGI--------KTKSDLPTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQLLKQPDC-----VKVLIT  374 (375)
Q Consensus       316 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~-----~kvvi~  374 (375)
                      .+++....        ...+.++++++++++|+++  +.++ ++|||+++++|++.+.+++.     +|+|++
T Consensus       264 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~  334 (343)
T 3gaz_A          264 SGVFTLHTLLANEGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAIT  334 (343)
T ss_dssp             EECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEE
T ss_pred             EEEEeccchhcccchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHHHcCCCcccccceEEEE
Confidence            98753211        0124578899999999998  4577 79999999999999988754     488875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.7e-51  Score=388.62  Aligned_cols=318  Identities=18%  Similarity=0.231  Sum_probs=270.5

Q ss_pred             ccceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCC
Q 017201            5 QAITCKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      .+.+|||+++.+++.  .++++++|.|+|+++||+|||.++|||++|++ +.|.++. +.+|.++|||++|+|+++|++|
T Consensus        19 ~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v   98 (354)
T 2j8z_A           19 YFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGC   98 (354)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC
T ss_pred             chhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCc
Confidence            567899999998885  38999999999999999999999999999999 8886654 3578999999999999999999


Q ss_pred             -CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc
Q 017201           81 -KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV  159 (375)
Q Consensus        81 -~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  159 (375)
                       ++|++||+|++..                             .+                  |+|+||++++++.++++
T Consensus        99 ~~~~~vGdrV~~~~-----------------------------~~------------------G~~aey~~v~~~~~~~i  131 (354)
T 2j8z_A           99 QGHWKIGDTAMALL-----------------------------PG------------------GGQAQYVTVPEGLLMPI  131 (354)
T ss_dssp             --CCCTTCEEEEEC-----------------------------SS------------------CCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCCCEEEEec-----------------------------CC------------------CcceeEEEeCHHHcEEC
Confidence             9999999998432                             12                  39999999999999999


Q ss_pred             CCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          160 DPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       160 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.
T Consensus       132 P~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~  210 (354)
T 2j8z_A          132 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAA  210 (354)
T ss_dssp             CTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSE
T ss_pred             CCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcE
Confidence            9999999999999999999999878899999999999986 9999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchH-HHhhcCCceEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKG  317 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~~~~~~~~  317 (375)
                      +++..+   .++.+.+.+.+++.++|++||++|+. .+..++++++++ |+++.+|...+....++. ..++.+++++.+
T Consensus       211 ~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g  285 (354)
T 2j8z_A          211 GFNYKK---EDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALD-GRWVLYGLMGGGDINGPLFSKLLFKRGSLIT  285 (354)
T ss_dssp             EEETTT---SCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEE-EEEEECCCTTCSCCCSCHHHHHHHTTCEEEE
T ss_pred             EEecCC---hHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCC-CEEEEEeccCCCccCCChhHHHHhCCCEEEE
Confidence            998877   67888888888777899999999987 889999999997 999999976544456777 677779999999


Q ss_pred             EeeccccCC-------CCHHHHHHHHHcC-CCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          318 TTFGGIKTK-------SDLPTLLDKCKNK-EFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       318 ~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +........       ..++++++++++| ++++.++++++|||+++++|++.+.+++. +|+||++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          286 SLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             CCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEec
Confidence            764322100       0123577888899 33344778999999999999999988765 6999874

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.4e-51  Score=388.70  Aligned_cols=311  Identities=23%  Similarity=0.337  Sum_probs=261.2

Q ss_pred             ceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 017201            7 ITCKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         7 ~~~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ++|||+++++++.  .++++++|.|+|++|||+|||.+++||++|++ +.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            6899999999885  39999999999999999999999999999999 8887653 578999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||||+..+                             .+                  |+|+||+.++++.++++|++
T Consensus        82 ~~~GdrV~~~~-----------------------------~~------------------G~~aey~~v~~~~~~~iP~~  114 (349)
T 4a27_A           82 YEIGDRVMAFV-----------------------------NY------------------NAWAEVVCTPVEFVYKIPDD  114 (349)
T ss_dssp             CCTTCEEEEEC-----------------------------SS------------------CCSBSEEEEEGGGEEECCTT
T ss_pred             CCCCCEEEEec-----------------------------CC------------------CcceEEEEecHHHeEECCCC
Confidence            99999998432                             22                  39999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|..+|++++ ++++++.++ +|++.+++
T Consensus       115 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~  192 (349)
T 4a27_A          115 MSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD  192 (349)
T ss_dssp             SCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc
Confidence            9999999999999999999888899999999999998 99999999999999755898887 678888888 99999998


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC---c-------------cccchH
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD---A-------------MVPLNV  305 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~---~-------------~~~~~~  305 (375)
                       .+   .++.+.+++++++ ++|+|||++|++ .++.++++++++ |+++.+|....   .             ...+++
T Consensus       193 -~~---~~~~~~~~~~~~~-g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
T 4a27_A          193 -RN---ADYVQEVKRISAE-GVDIVLDCLCGD-NTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNP  265 (349)
T ss_dssp             -TT---SCHHHHHHHHCTT-CEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CH
T ss_pred             -CC---ccHHHHHHHhcCC-CceEEEECCCch-hHHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCH
Confidence             55   6888899888765 999999999987 568999999997 99999997532   1             123566


Q ss_pred             HHhhcCCceEEEEeeccccC--------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          306 IALACGGRTLKGTTFGGIKT--------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..++.+++++.++....+..        .++++++++++++|+++  ++++++||++++++|++.+.+++. +|+||++
T Consensus       266 ~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          266 IKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             HHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEET
T ss_pred             HHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEEec
Confidence            66777899999987543211        34678899999999997  568899999999999999988877 5999974

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.6e-51  Score=382.46  Aligned_cols=307  Identities=19%  Similarity=0.177  Sum_probs=259.8

Q ss_pred             ccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-----CCCCCCcccCcceeEEEEEe
Q 017201            5 QAITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-----PAPLYPRVLGHEGVGVVESA   76 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-----~~~~~p~i~G~e~~G~Vv~v   76 (375)
                      .+++|||+++.+++++  ++++++|.|+|++|||+|||.+++||++|++ +.|..     ....+|.++|||++|+|+++
T Consensus         3 ~m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~v   82 (321)
T 3tqh_A            3 AMKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL   82 (321)
T ss_dssp             --CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEE
T ss_pred             ccccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEe
Confidence            4568999999998876  9999999999999999999999999999999 88731     23568999999999999999


Q ss_pred             CCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccE
Q 017201           77 GDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYV  156 (375)
Q Consensus        77 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  156 (375)
                      |++|+++++||||++.+..++                         .+                  |+|+||+.++++.+
T Consensus        83 G~~v~~~~~GdrV~~~~~~~~-------------------------~~------------------G~~aey~~v~~~~~  119 (321)
T 3tqh_A           83 GSDVNNVNIGDKVMGIAGFPD-------------------------HP------------------CCYAEYVCASPDTI  119 (321)
T ss_dssp             CTTCCSCCTTCEEEEECSTTT-------------------------CC------------------CCSBSEEEECGGGE
T ss_pred             CCCCCCCCCCCEEEEccCCCC-------------------------CC------------------CcceEEEEecHHHh
Confidence            999999999999987642211                         12                  49999999999999


Q ss_pred             EEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201          157 VKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       157 ~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G-ag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      +++|+++++++||++++++.|||+++ +.+++++|++|||+| +|++|++++|+|+..|+ +|++++ +++++++++++|
T Consensus       120 ~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lG  196 (321)
T 3tqh_A          120 IQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALG  196 (321)
T ss_dssp             EECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHT
T ss_pred             ccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcC
Confidence            99999999999999999999999998 889999999999997 59999999999999999 899887 566789999999


Q ss_pred             CcEEeCCCCCCccc-HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCce
Q 017201          236 MTDFINPDDEPNKS-ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRT  314 (375)
Q Consensus       236 ~~~v~~~~~~~~~~-~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  314 (375)
                      ++.++|+.+   .+ +.+.+      .++|+|||++|++ .++.++++++++ |+++.+|.... ..  ....+..++++
T Consensus       197 a~~~i~~~~---~~~~~~~~------~g~D~v~d~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~-~~--~~~~~~~~~~~  262 (321)
T 3tqh_A          197 AEQCINYHE---EDFLLAIS------TPVDAVIDLVGGD-VGIQSIDCLKET-GCIVSVPTITA-GR--VIEVAKQKHRR  262 (321)
T ss_dssp             CSEEEETTT---SCHHHHCC------SCEEEEEESSCHH-HHHHHGGGEEEE-EEEEECCSTTH-HH--HHHHHHHTTCE
T ss_pred             CCEEEeCCC---cchhhhhc------cCCCEEEECCCcH-HHHHHHHhccCC-CEEEEeCCCCc-hh--hhhhhhhcceE
Confidence            999999887   45 54433      3799999999988 459999999997 99999986542 11  12234568888


Q ss_pred             EEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          315 LKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +.++...  ...++++++++++.+|++++  .++++|||+++++||+.+.+++. +|+||++
T Consensus       263 ~~~~~~~--~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          263 AFGLLKQ--FNIEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             EECCCCC--CCHHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEEecC--CCHHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence            8875322  22456889999999999985  48899999999999999998887 5999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.7e-50  Score=384.05  Aligned_cols=320  Identities=15%  Similarity=0.140  Sum_probs=264.5

Q ss_pred             ccceeeEEEEecCCCCeEEE-EeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVE-EIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~-~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .|.+|||+++.+++ .++++ ++|.|+|+++||+|||.+++||++|++ +.+.   +.+|.++|||++|+|+++|++|++
T Consensus         8 ~p~~mkA~v~~~~~-~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~~   83 (371)
T 3gqv_A            8 PPPQQTALTVNDHD-EVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVTH   83 (371)
T ss_dssp             CCSCEEEEEECTTS-CEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCCS
T ss_pred             CchhceeEEEcCCC-ceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCCC
Confidence            45689999999997 59998 999999999999999999999999999 7653   346899999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||||+..       |..|..+              ...+                  |+|+||++++++.++++|++
T Consensus        84 ~~~GdrV~~~-------~~~~~~~--------------~~~~------------------G~~aey~~v~~~~~~~~P~~  124 (371)
T 3gqv_A           84 IQVGDRVYGA-------QNEMCPR--------------TPDQ------------------GAFSQYTVTRGRVWAKIPKG  124 (371)
T ss_dssp             CCTTCEEEEE-------CCTTCTT--------------CTTC------------------CSSBSEEECCTTCEEECCTT
T ss_pred             CCCCCEEEEe-------ccCCCCC--------------CCCC------------------CcCcCeEEEchhheEECCCC
Confidence            9999999754       3333221              1222                  49999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhh-cCC-----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKE-AKV-----------EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE  229 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~-~~~-----------~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~  229 (375)
                      +++++||++++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+..|+ +|+++. +++|++
T Consensus       125 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          125 LSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFD  202 (371)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHH
T ss_pred             CCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHH
Confidence            99999999999999999998776 553           89999999998 9999999999999999 899887 799999


Q ss_pred             HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhc-ccCCeEEEEEccCCC-----ccccc
Q 017201          230 KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT-KVGKGKVIVIGVGVD-----AMVPL  303 (375)
Q Consensus       230 ~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~-----~~~~~  303 (375)
                      +++++|++.++|+++   +++.+.+++++++ ++|+|||++|++..++.+++++ +++ |+++.+|....     .....
T Consensus       203 ~~~~lGa~~vi~~~~---~~~~~~v~~~t~g-~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~  277 (371)
T 3gqv_A          203 LAKSRGAEEVFDYRA---PNLAQTIRTYTKN-NLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTT  277 (371)
T ss_dssp             HHHHTTCSEEEETTS---TTHHHHHHHHTTT-CCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEE
T ss_pred             HHHHcCCcEEEECCC---chHHHHHHHHccC-CccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccce
Confidence            999999999999987   7899999999988 5999999999987899999999 587 99999986442     11111


Q ss_pred             h---HHHhhcCCceEEEEeeccccC------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-e-EEE
Q 017201          304 N---VIALACGGRTLKGTTFGGIKT------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-V-KVL  372 (375)
Q Consensus       304 ~---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-kvv  372 (375)
                      +   ...++.|++++.++.......      .+.++++++++.+|++++.+.++++|+|+++++||+.+.+++. + |+|
T Consensus       278 ~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvv  357 (371)
T 3gqv_A          278 DWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLV  357 (371)
T ss_dssp             EECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEE
T ss_pred             eeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEE
Confidence            1   234566888887764221110      1123478899999999998888888999999999999998876 4 666


Q ss_pred             Ee
Q 017201          373 IT  374 (375)
Q Consensus       373 i~  374 (375)
                      |+
T Consensus       358 v~  359 (371)
T 3gqv_A          358 VR  359 (371)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=3.3e-51  Score=387.21  Aligned_cols=316  Identities=23%  Similarity=0.320  Sum_probs=263.6

Q ss_pred             ccceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCC
Q 017201            5 QAITCKAVVCWGLGEP---LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      .+.+|||+++.+++.+   ++++++|.|+|+++||+|||.++|||++|++ +.|.++. +.+|.++|||++|+|+++|++
T Consensus        23 m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~  102 (357)
T 1zsy_A           23 MPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSN  102 (357)
T ss_dssp             CCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTT
T ss_pred             CchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCC
Confidence            4567999999999875   8899999999999999999999999999999 8887654 357999999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV  159 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  159 (375)
                      |+++++||||++.+.                                              +.|+|+||++++++.++++
T Consensus       103 v~~~~vGdrV~~~~~----------------------------------------------~~G~~aey~~v~~~~~~~i  136 (357)
T 1zsy_A          103 VTGLKPGDWVIPANA----------------------------------------------GLGTWRTEAVFSEEALIQV  136 (357)
T ss_dssp             CCSCCTTCEEEESSS----------------------------------------------CSCCSBSEEEEEGGGEEEE
T ss_pred             CCCCCCCCEEEEcCC----------------------------------------------CCccceeEEecCHHHcEEC
Confidence            999999999985431                                              1149999999999999999


Q ss_pred             CCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHhhhc
Q 017201          160 DPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP----WKKEKGKAF  234 (375)
Q Consensus       160 p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~----~~~~~~~~l  234 (375)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||..|+ ++++++++.    +++++++++
T Consensus       137 P~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~l  215 (357)
T 1zsy_A          137 PSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSL  215 (357)
T ss_dssp             CSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHT
T ss_pred             CCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhc
Confidence            9999999999999999999999877789999999999998 9999999999999999 676666443    356788999


Q ss_pred             CCcEEeCCCCCCcccHHHHHHhhcCCC-CccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCc
Q 017201          235 GMTDFINPDDEPNKSISELVKGITHGM-GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR  313 (375)
Q Consensus       235 g~~~v~~~~~~~~~~~~~~i~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  313 (375)
                      |++.++++.+    ...+.+.+.+.+. ++|+|||++|++ ....++++++++ |+++.+|........++...+..+++
T Consensus       216 Ga~~vi~~~~----~~~~~~~~~~~~~~~~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~  289 (357)
T 1zsy_A          216 GAEHVITEEE----LRRPEMKNFFKDMPQPRLALNCVGGK-SSTELLRQLARG-GTMVTYGGMAKQPVVASVSLLIFKDL  289 (357)
T ss_dssp             TCSEEEEHHH----HHSGGGGGTTSSSCCCSEEEESSCHH-HHHHHHTTSCTT-CEEEECCCCTTCCBCCCHHHHHHSCC
T ss_pred             CCcEEEecCc----chHHHHHHHHhCCCCceEEEECCCcH-HHHHHHHhhCCC-CEEEEEecCCCCCCCCCHHHHHhcCc
Confidence            9999987643    1123445555543 599999999987 456799999997 99999986544456677777778999


Q ss_pred             eEEEEeecccc-------CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          314 TLKGTTFGGIK-------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       314 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ++.++....+.       ..+.++++++++++|++++.  +.++|||+++++|++.+.+++. +|+||++
T Consensus       290 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          290 KLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             EEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             eEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            99998654321       12346789999999999864  4589999999999999988775 5999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.8e-50  Score=381.06  Aligned_cols=313  Identities=25%  Similarity=0.346  Sum_probs=267.7

Q ss_pred             cceeeEEEEecCCCC--eEE-EEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCC
Q 017201            6 AITCKAVVCWGLGEP--LKV-EEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~--l~~-~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      +.+|||+++.+++.+  +++ +++|.|+|+++||+|||.++|||++|++ +.|.++. +.+|.++|||++|+|+++|++|
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence            457999999987754  888 8999999999999999999999999999 8886643 5689999999999999999999


Q ss_pred             CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      ++|++||||++.+.                            .+                  |+|+||++++++.++++|
T Consensus       107 ~~~~vGdrV~~~~~----------------------------~~------------------G~~aey~~v~~~~~~~~P  140 (351)
T 1yb5_A          107 SAFKKGDRVFTSST----------------------------IS------------------GGYAEYALAADHTVYKLP  140 (351)
T ss_dssp             TTCCTTCEEEESCC----------------------------SS------------------CSSBSEEEEEGGGEEECC
T ss_pred             CCCCCCCEEEEeCC----------------------------CC------------------CcceeEEEECHHHeEECC
Confidence            99999999985421                            01                  499999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v  239 (375)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.+
T Consensus       141 ~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~  219 (351)
T 1yb5_A          141 EKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEV  219 (351)
T ss_dssp             TTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEE
T ss_pred             CCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEE
Confidence            999999999999999999999877889999999999998 9999999999999999 99999999999999999999999


Q ss_pred             eCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201          240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      ++..+   .++.+.+.+.+++.++|++||++|+. .++.++++++++ |+++.+|...  ...+++..++.+++++.++.
T Consensus       220 ~d~~~---~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~~~~~~~i~g~~  292 (351)
T 1yb5_A          220 FNHRE---VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSRG--TIEINPRDTMAKESSIIGVT  292 (351)
T ss_dssp             EETTS---TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCCS--CEEECTHHHHTTTCEEEECC
T ss_pred             EeCCC---chHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHhccCC-CEEEEEecCC--CCccCHHHHHhCCcEEEEEE
Confidence            98877   67888888888777899999999986 789999999997 9999999653  34566667777999999875


Q ss_pred             eccccCCCCH----HHHHHHHHcCCCCCCcceeeEeecccHHHHHHH-HcCCC-eeEEEEeC
Q 017201          320 FGGIKTKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL-LKQPD-CVKVLITI  375 (375)
Q Consensus       320 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~-~~kvvi~~  375 (375)
                      .... ..+++    +.+.+++.+|+++  ++++++|||+++++|++. +++++ .+|+||++
T Consensus       293 ~~~~-~~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          293 LFSS-TKEEFQQYAAALQAGMEIGWLK--PVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             GGGC-CHHHHHHHHHHHHHHHHHTCCC--CCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eecC-CHHHHHHHHHHHHHHHHCCCcc--CccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            4322 11233    3455677788877  568899999999999998 55544 46999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.8e-51  Score=387.35  Aligned_cols=321  Identities=20%  Similarity=0.206  Sum_probs=267.0

Q ss_pred             cceeeEEEEecCCCC---eEEEEeecCCCC--CCeEEEEEeeeecCCCccc-ccCCCCC-CCCC---------cccCcce
Q 017201            6 AITCKAVVCWGLGEP---LKVEEIQVEPPK--STEVRVKMLYASVCHTDIL-CSEGFPA-PLYP---------RVLGHEG   69 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~---l~~~~~~~p~~~--~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p---------~i~G~e~   69 (375)
                      |++|||+++.+++++   ++++++|.|+|+  ++||+|||.++|||++|++ +.|.++. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            568999999999865   899999999887  9999999999999999999 8886653 3467         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeE
Q 017201           70 VGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYM  149 (375)
Q Consensus        70 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~  149 (375)
                      +|+|+++|++|++|++||+|++.+.                                              +.|+|+||+
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~----------------------------------------------~~G~~aey~  114 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHV----------------------------------------------NFGTWRTHA  114 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS----------------------------------------------CCCCSBSEE
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCC----------------------------------------------CCCcchheE
Confidence            9999999999999999999985421                                              014999999


Q ss_pred             EeecccEEEcCC-----------CCCcccccccccchhhhhhhhhhhcCCCCC-CEEEEECC-CHHHHHHHHHHHHcCCC
Q 017201          150 VIDANYVVKVDP-----------SIDPSDASFLSCGFTTGYGAAWKEAKVEKG-SSVAVLGL-GTVGLGAVDGARMHGAA  216 (375)
Q Consensus       150 ~v~~~~~~~lp~-----------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~VlI~Ga-g~~G~~ai~la~~~G~~  216 (375)
                      +++++.++++|+           ++++++||++++++.|||+++.+.+++++| ++|||+|+ |++|++++|+||..|+ 
T Consensus       115 ~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-  193 (364)
T 1gu7_A          115 LGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-  193 (364)
T ss_dssp             EEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-
T ss_pred             ecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-
Confidence            999999999998           899999999999999999998776799999 99999998 9999999999999999 


Q ss_pred             eEEEEcCChhh----HHHhhhcCCcEEeCCCCCCcccHHHHHHhhc--CCCCccEEEEccCChhhHHHHHHhcccCCeEE
Q 017201          217 KIIGIDKNPWK----KEKGKAFGMTDFINPDDEPNKSISELVKGIT--HGMGVDYCFECTGVPSLLSEALETTKVGKGKV  290 (375)
Q Consensus       217 ~V~~~~~~~~~----~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~i  290 (375)
                      +|+++++++++    +++++++|++.++++.+....++.+.+++++  ++.++|+|||++|+... ..++++++++ |++
T Consensus       194 ~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~-G~~  271 (364)
T 1gu7_A          194 NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNN-GLM  271 (364)
T ss_dssp             EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTT-CEE
T ss_pred             EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccC-CEE
Confidence            88888866654    6778899999999875200036777888887  55689999999998744 5889999997 999


Q ss_pred             EEEccCCCccccchHHHhhcCCceEEEEeeccccC------CCCHHHHHHHHHcCCCCCCcceeeEe-ecccHHHHHHHH
Q 017201          291 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT------KSDLPTLLDKCKNKEFKLHQLLTHHV-KLEEIDKAIQLL  363 (375)
Q Consensus       291 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~  363 (375)
                      +.+|........++...++.+++++.++....+..      .+.++++++++++|++++.+..+..+ +++++++||+.+
T Consensus       272 v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~  351 (364)
T 1gu7_A          272 LTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDG  351 (364)
T ss_dssp             EECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHH
T ss_pred             EEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHH
Confidence            99997654455677777778999999976543211      24578899999999999765443333 345999999999


Q ss_pred             cCCCe-eEEEEeC
Q 017201          364 KQPDC-VKVLITI  375 (375)
Q Consensus       364 ~~~~~-~kvvi~~  375 (375)
                      .+++. +|+||++
T Consensus       352 ~~~~~~gKvvv~~  364 (364)
T 1gu7_A          352 VANSKDGKQLITY  364 (364)
T ss_dssp             HHTGGGSCEEEEC
T ss_pred             HhCCCCceEEEeC
Confidence            87755 6999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.2e-50  Score=379.88  Aligned_cols=313  Identities=23%  Similarity=0.272  Sum_probs=267.5

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-CC--CCCCcccCcceeEEEEEeCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-PA--PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-~~--~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      |||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|++ +.|.+ +.  ..+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999987754  8899999999999999999999999999999 88865 22  457999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||||++.+.                            .+                  |+|+||++++++.++++|++
T Consensus        82 ~~~GdrV~~~~~----------------------------~~------------------G~~aey~~v~~~~~~~iP~~  115 (333)
T 1wly_A           82 FTVGERVCTCLP----------------------------PL------------------GAYSQERLYPAEKLIKVPKD  115 (333)
T ss_dssp             CCTTCEEEECSS----------------------------SC------------------CCSBSEEEEEGGGCEECCTT
T ss_pred             CCCCCEEEEecC----------------------------CC------------------CcceeEEEecHHHcEeCCCC
Confidence            999999974321                            01                  49999999999999999999


Q ss_pred             CCccc--ccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE
Q 017201          163 IDPSD--ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       163 ~~~~~--aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v  239 (375)
                      +++++  ||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+
T Consensus       116 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~  194 (333)
T 1wly_A          116 LDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHT  194 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEE
T ss_pred             CChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            99999  99999999999999877889999999999997 9999999999999999 99999999999999999999999


Q ss_pred             eCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH-HhhcCC--ceEE
Q 017201          240 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGG--RTLK  316 (375)
Q Consensus       240 ~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~--~~~~  316 (375)
                      ++..+   .++.+.+.+.+.+.++|++||++|+ ..++.++++++++ |+++.+|...+....++.. .++.|+  +++.
T Consensus       195 ~d~~~---~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~  269 (333)
T 1wly_A          195 INYST---QDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASGVADPIRVVEDLGVRGSLFITR  269 (333)
T ss_dssp             EETTT---SCHHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTCCCCCCCHHHHTTTTTSCEEEC
T ss_pred             EECCC---HHHHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCCCCcCCCChhHhhhhcCCcEEEE
Confidence            88876   6788888888877789999999998 4899999999997 9999999775434456666 677788  8988


Q ss_pred             EEeeccccC----CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          317 GTTFGGIKT----KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       317 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      |+....+..    .+.++++++++.+|+++  +.++++|||+++++|++.+.+++. +|+||++
T Consensus       270 g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          270 PALWHYMSNRSEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             CCGGGGSCSHHHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEET
T ss_pred             EeehhhccCHHHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            875321111    12578899999999987  458899999999999999987765 6999874

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=5.9e-51  Score=379.19  Aligned_cols=300  Identities=13%  Similarity=0.145  Sum_probs=244.0

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            7 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         7 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      .||||+++++..+.++++++|.|+|+++||+|||.+++||++|++ +.|.++...+|.++|||++|+|+++|++|+++++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   82 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML   82 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence            479999999544469999999999999999999999999999999 8888776788999999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||||++.+                          +...+                  |+|+||+.++++.++++|+++++
T Consensus        83 GdrV~~~~--------------------------~~~~~------------------G~~aey~~v~~~~~~~iP~~~~~  118 (315)
T 3goh_A           83 GRRVAYHT--------------------------SLKRH------------------GSFAEFTVLNTDRVMTLPDNLSF  118 (315)
T ss_dssp             TCEEEEEC--------------------------CTTSC------------------CSSBSEEEEETTSEEECCTTSCH
T ss_pred             CCEEEEeC--------------------------CCCCC------------------cccccEEEEcHHHhccCcCCCCH
Confidence            99998654                          22222                  49999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++||+++++++|||+++ +.+++++|++|||+|+|++|++++|+||+.|+ +|++++ +++|+++++++|++.+++. . 
T Consensus       119 ~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~d-~-  193 (315)
T 3goh_A          119 ERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYRE-P-  193 (315)
T ss_dssp             HHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEESS-G-
T ss_pred             HHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEcC-H-
Confidence            99999999999999998 88999999999999999999999999999999 999999 9999999999999998841 1 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc-
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK-  324 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  324 (375)
                        +       ++  +.++|+|||++|++ .+..++++++++ |+++.+|.... ...+   ..+.+.+.+....+.... 
T Consensus       194 --~-------~v--~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~---~~~~~~~~~~~~~~~~~~~  256 (315)
T 3goh_A          194 --S-------QV--TQKYFAIFDAVNSQ-NAAALVPSLKAN-GHIICIQDRIP-APID---PAFTRTISYHEIALGALHD  256 (315)
T ss_dssp             --G-------GC--CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGGGHHH
T ss_pred             --H-------Hh--CCCccEEEECCCch-hHHHHHHHhcCC-CEEEEEeCCCC-cccc---chhhhcceeeEEEeecccc
Confidence              1       12  45899999999987 558899999997 99999975542 2122   222355555554432211 


Q ss_pred             --C-------CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCeeEEEEeC
Q 017201          325 --T-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  375 (375)
Q Consensus       325 --~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvi~~  375 (375)
                        .       .+.++++++++++|+++  ++++++|||+++++|++.+. +..+|+||++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~  313 (315)
T 3goh_A          257 FGDRQDWQILMQQGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTL  313 (315)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEES
T ss_pred             cCChhHHHHHHHHHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-hcCCcEEEEe
Confidence              1       12357899999999987  56889999999999999998 5457999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.4e-50  Score=375.27  Aligned_cols=313  Identities=21%  Similarity=0.241  Sum_probs=269.4

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      |||+++.+++.+  ++++++|.|+|+++||+|||.+++||++|++ +.|.++.+.+|.++|||++|+|+++|++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999987754  8899999999999999999999999999999 8887655568999999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||||. ..                          | ..+                  |+|+||++++++.++++|+++++
T Consensus        82 GdrV~-~~--------------------------g-~~~------------------G~~aey~~v~~~~~~~iP~~l~~  115 (327)
T 1qor_A           82 GDRVV-YA--------------------------Q-SAL------------------GAYSSVHNIIADKAAILPAAISF  115 (327)
T ss_dssp             TCEEE-ES--------------------------C-CSS------------------CCSBSEEEEEGGGEEECCTTSCH
T ss_pred             CCEEE-EC--------------------------C-CCC------------------ceeeeEEEecHHHcEECCCCCCH
Confidence            99994 21                          0 001                  49999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      ++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+++..+
T Consensus       116 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~  194 (327)
T 1qor_A          116 EQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE  194 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT
T ss_pred             HHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC
Confidence            9999999999999999877889999999999996 9999999999999999 9999999999999999999999998876


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  323 (375)
                         +++.+.+.+.+.+.++|++||++| .+.++.++++++++ |+++.+|........++...++.+ ++++.+.....+
T Consensus       195 ---~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (327)
T 1qor_A          195 ---EDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGY  269 (327)
T ss_dssp             ---SCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHH
T ss_pred             ---ccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCCCCCccCHHHHhhccceEEEccchhhh
Confidence               678888888887778999999999 45899999999997 999999977543345666667767 788776543222


Q ss_pred             c-----CCCCHHHHHHHHHcCCCCCCccee--eEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 K-----TKSDLPTLLDKCKNKEFKLHQLLT--HHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 ~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .     ..+.++++++++.+|++++  .++  ++|||+++++|++.+.+++. +|+||++
T Consensus       270 ~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          270 ITTREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            1     1234688999999999985  477  89999999999999988765 6999874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=4.4e-51  Score=381.59  Aligned_cols=311  Identities=16%  Similarity=0.181  Sum_probs=264.3

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++++++++  ++++++|.|+|++|||+|||.+++||++|++ +.|..+. ..+|.++|||++|+|+++|  +++++
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            899999999876  8899999999999999999999999999999 8887654 5789999999999999998  57899


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||||++.+..                       .|...+                  |+|+||++++++.++++|++++
T Consensus        79 vGdrV~~~~~~-----------------------~g~~~~------------------G~~aey~~v~~~~~~~iP~~~~  117 (324)
T 3nx4_A           79 AGQEVLLTGWG-----------------------VGENHW------------------GGLAERARVKGDWLVALPAGLS  117 (324)
T ss_dssp             TTCEEEEECTT-----------------------BTTTBC------------------CSSBSEEEECGGGCEECCTTCC
T ss_pred             CCCEEEEcccc-----------------------cCCCCC------------------CceeeEEecCHHHcEECCCCCC
Confidence            99999976411                       133333                  3999999999999999999999


Q ss_pred             cccccccccchhhhhhhhh--hhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe
Q 017201          165 PSDASFLSCGFTTGYGAAW--KEAKVEKGS-SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~  240 (375)
                      +++||++++++.|||+++.  ...++++++ +|||+|+ |++|++++|+||+.|+ +|++++++++|+++++++|++.++
T Consensus       118 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi  196 (324)
T 3nx4_A          118 SRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRIL  196 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEE
T ss_pred             HHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEE
Confidence            9999999999999998875  445677643 4999998 9999999999999999 999999999999999999999999


Q ss_pred             CCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          241 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       241 ~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      |+++   .+.   +++++++ ++|++||++|++ .++.++++++++ |+++.+|.......+++...++.|++++.++..
T Consensus       197 ~~~~---~~~---~~~~~~~-~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~  267 (324)
T 3nx4_A          197 SRDE---FAE---SRPLEKQ-LWAGAIDTVGDK-VLAKVLAQMNYG-GCVAACGLAGGFALPTTVMPFILRNVRLQGVDS  267 (324)
T ss_dssp             EGGG---SSC---CCSSCCC-CEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTCSEEEEESHHHHHHCCEEEECCS
T ss_pred             ecCC---HHH---HHhhcCC-CccEEEECCCcH-HHHHHHHHHhcC-CEEEEEecCCCCCCCCCHHHHhhcCeEEEEEec
Confidence            8876   222   4455555 899999999987 899999999997 999999987654566777777789999999764


Q ss_pred             ccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          321 GGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       321 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .....   .+.++.+++++++|++++  + +++|+++++++|++.+.+++. +|+||++
T Consensus       268 ~~~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          268 VMTPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             TTCCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cccChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCCCceEEEec
Confidence            32211   134678889999999874  4 889999999999999998887 5999975

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=7.6e-49  Score=371.57  Aligned_cols=312  Identities=20%  Similarity=0.237  Sum_probs=265.1

Q ss_pred             cceeeEEEEecCCC----CeEE-EEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCC
Q 017201            6 AITCKAVVCWGLGE----PLKV-EEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         6 ~~~~~a~~~~~~~~----~l~~-~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      +.+|||+++.+++.    .+++ +++|.|+|+++||+|||.++|||++|++ +.|.++. ..+|.++|||++|+|+++|+
T Consensus        21 ~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~  100 (362)
T 2c0c_A           21 QSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGL  100 (362)
T ss_dssp             CCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECT
T ss_pred             hhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECC
Confidence            55899999999874    4889 9999999999999999999999999999 8887643 46799999999999999999


Q ss_pred             CCC-CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEE
Q 017201           79 EVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV  157 (375)
Q Consensus        79 ~v~-~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  157 (375)
                      +|+ ++++||||++..                                                .|+|+||++++++.++
T Consensus       101 ~V~~~~~vGdrV~~~~------------------------------------------------~G~~aey~~v~~~~~~  132 (362)
T 2c0c_A          101 SASARYTVGQAVAYMA------------------------------------------------PGSFAEYTVVPASIAT  132 (362)
T ss_dssp             TGGGTCCTTCEEEEEC------------------------------------------------SCCSBSEEEEEGGGCE
T ss_pred             CccCCCCCCCEEEEcc------------------------------------------------CCcceeEEEEcHHHeE
Confidence            999 999999998432                                                1499999999999999


Q ss_pred             EcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201          158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      ++|+. + .++|+++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+
T Consensus       133 ~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga  209 (362)
T 2c0c_A          133 PVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGC  209 (362)
T ss_dssp             ECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTC
T ss_pred             ECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCC
Confidence            99996 3 4677888899999999888889999999999996 9999999999999999 89999999999999999999


Q ss_pred             cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCcc--c--------cchHH
Q 017201          237 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM--V--------PLNVI  306 (375)
Q Consensus       237 ~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~--~--------~~~~~  306 (375)
                      +.++++.+   +++.+.+++.++ .++|++||++|+. .++.++++++++ |+++.+|......  .        .+ ..
T Consensus       210 ~~~~~~~~---~~~~~~~~~~~~-~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~-~~  282 (362)
T 2c0c_A          210 DRPINYKT---EPVGTVLKQEYP-EGVDVVYESVGGA-MFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTL-PA  282 (362)
T ss_dssp             SEEEETTT---SCHHHHHHHHCT-TCEEEEEECSCTH-HHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTH-HH
T ss_pred             cEEEecCC---hhHHHHHHHhcC-CCCCEEEECCCHH-HHHHHHHHHhcC-CEEEEEeCCCCcCccccccccccccc-HH
Confidence            99998876   678888887764 4899999999985 889999999997 9999998764311  1        22 24


Q ss_pred             HhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcc------eeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          307 ALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQL------LTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .++.+++++.++....+.  ..+.++++++++++|++++...      +++.++|+++++|++.+.+++. +|+||++
T Consensus       283 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          283 KLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             HHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEc
Confidence            566799999987654321  1345788999999999986533      2456899999999999988765 6999874

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=8.2e-50  Score=373.89  Aligned_cols=317  Identities=22%  Similarity=0.242  Sum_probs=257.6

Q ss_pred             cceeeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 017201            6 AITCKAVVCWGLG--EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         6 ~~~~~a~~~~~~~--~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      +.+|||+++.+++  ..++++++|.|+|+++||+|||.++|||++|++ +.|..+. ..+|.++|||++|+|+++  +++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCC
Confidence            3479999999876  358999999999999999999999999999999 8886543 457999999999999996  467


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      ++++||||++.+..                       .|...+                  |+|+||++++++.++++|+
T Consensus        80 ~~~vGdrV~~~~~~-----------------------~g~~~~------------------G~~aey~~v~~~~~~~iP~  118 (330)
T 1tt7_A           80 RFAEGDEVIATSYE-----------------------LGVSRD------------------GGLSEYASVPGDWLVPLPQ  118 (330)
T ss_dssp             TCCTTCEEEEESTT-----------------------BTTTBC------------------CSSBSSEEECGGGEEECCT
T ss_pred             CCCCCCEEEEcccc-----------------------cCCCCC------------------ccceeEEEecHHHeEECCC
Confidence            89999999865321                       122223                  4999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhh--hhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc
Q 017201          162 SIDPSDASFLSCGFTTGYGAAW--KEAKVEKGS-SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT  237 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~  237 (375)
                      ++++++||++++++.|||.++.  ..+++++|+ +|||+|+ |++|++++|+|+..|+ +|++++++++|+++++++|++
T Consensus       119 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~  197 (330)
T 1tt7_A          119 NLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGAS  197 (330)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCS
T ss_pred             CCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCc
Confidence            9999999999999999998764  456789997 9999998 9999999999999999 899999999999999999999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEE
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKG  317 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~  317 (375)
                      .++++.+   .+ .+.++++++ .++|++||++|++ .++.++++++++ |+++.+|...+....++...++.|++++.+
T Consensus       198 ~v~~~~~---~~-~~~~~~~~~-~~~d~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  270 (330)
T 1tt7_A          198 EVISRED---VY-DGTLKALSK-QQWQGAVDPVGGK-QLASLLSKIQYG-GSVAVSGLTGGGEVPATVYPFILRGVSLLG  270 (330)
T ss_dssp             EEEEHHH---HC-SSCCCSSCC-CCEEEEEESCCTH-HHHHHHTTEEEE-EEEEECCCSSCSCEEECSHHHHTSCCEEEE
T ss_pred             EEEECCC---ch-HHHHHHhhc-CCccEEEECCcHH-HHHHHHHhhcCC-CEEEEEecCCCCccCcchHHHHhcCeEEEE
Confidence            9887543   11 112333443 3899999999986 899999999997 999999987643455666677779999998


Q ss_pred             Eeecccc---CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          318 TTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       318 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      +......   ..+.++.+++++.+++++  ++++++|||+++++|++.+.+++. +|+||++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          271 IDSVYCPMDVRAAVWERMSSDLKPDQLL--TIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             CCSSSCCHHHHHHHHHHTTTTSCCSCST--TSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             EeccccCHHHHHHHHHHHHHHHhcCCcc--cccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            7422111   012344555666678776  567899999999999999988775 6999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=8.1e-48  Score=361.24  Aligned_cols=307  Identities=19%  Similarity=0.212  Sum_probs=263.3

Q ss_pred             ceeeEEEEec------CCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcc----eeEEEEE
Q 017201            7 ITCKAVVCWG------LGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHE----GVGVVES   75 (375)
Q Consensus         7 ~~~~a~~~~~------~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e----~~G~Vv~   75 (375)
                      ++|||+++..      ..+.++++++|.|+|++|||+|||.+++||++|++ +.+... ..+|.++|||    ++|+|++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~   84 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV   84 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence            5799999985      22469999999999999999999999999999998 665322 3456777777    7999999


Q ss_pred             eCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201           76 AGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY  155 (375)
Q Consensus        76 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  155 (375)
                      .  +++++++||||++.                                                  |+|+||++++++.
T Consensus        85 ~--~v~~~~vGdrV~~~--------------------------------------------------G~~aey~~v~~~~  112 (336)
T 4b7c_A           85 S--KHPGFQAGDYVNGA--------------------------------------------------LGVQDYFIGEPKG  112 (336)
T ss_dssp             E--CSTTCCTTCEEEEE--------------------------------------------------CCSBSEEEECCTT
T ss_pred             c--CCCCCCCCCEEecc--------------------------------------------------CCceEEEEechHH
Confidence            4  58899999999732                                                  3899999999999


Q ss_pred             EEEcCCCCCcccc--cccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-
Q 017201          156 VVKVDPSIDPSDA--SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-  231 (375)
Q Consensus       156 ~~~lp~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-  231 (375)
                      ++++|+++++.++  |++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.+ 
T Consensus       113 ~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~  191 (336)
T 4b7c_A          113 FYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLV  191 (336)
T ss_dssp             CEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             eEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence            9999999988886  7889999999999888899999999999998 9999999999999999 999999999999999 


Q ss_pred             hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC------ccccchH
Q 017201          232 KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD------AMVPLNV  305 (375)
Q Consensus       232 ~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~------~~~~~~~  305 (375)
                      +++|++.++++.+   .++.+.+.+.+++ ++|++||++|+. .+..++++++++ |+++.+|....      ....++.
T Consensus       192 ~~~g~~~~~~~~~---~~~~~~~~~~~~~-~~d~vi~~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~  265 (336)
T 4b7c_A          192 EELGFDGAIDYKN---EDLAAGLKRECPK-GIDVFFDNVGGE-ILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANY  265 (336)
T ss_dssp             HTTCCSEEEETTT---SCHHHHHHHHCTT-CEEEEEESSCHH-HHHHHHTTEEEE-EEEEECCCGGGGC------CCTTT
T ss_pred             HHcCCCEEEECCC---HHHHHHHHHhcCC-CceEEEECCCcc-hHHHHHHHHhhC-CEEEEEeecccccCCcccccchhH
Confidence            8999999999887   7888999888854 899999999975 889999999997 99999987652      1235666


Q ss_pred             HHhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          306 IALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..++.+++++.++....+.  ..+.++++++++++|++++.  +..++|++++++||+.+.+++. +|+||++
T Consensus       266 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          266 LSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSR--EDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             THHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccc--eeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            6777899999998755431  12467889999999999976  4556899999999999998877 5999975

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.2e-49  Score=367.16  Aligned_cols=314  Identities=21%  Similarity=0.228  Sum_probs=251.9

Q ss_pred             ceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 017201            7 ITCKAVVCWGLGE--PLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         7 ~~~~a~~~~~~~~--~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .+|||+++.+++.  .++++++|.|+|+++||+|||.+++||++|++ +.|..+. ..+|.++|||++|+|+++  ++++
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~   79 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPR   79 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSS
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCC
Confidence            4799999998874  48899999999999999999999999999999 8876442 457999999999999995  5688


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||||++.+..                       .|...+                  |+|+||++++++.++++|++
T Consensus        80 ~~vGdrV~~~~~~-----------------------~g~~~~------------------G~~aey~~v~~~~~~~~P~~  118 (328)
T 1xa0_A           80 FREGDEVIATGYE-----------------------IGVTHF------------------GGYSEYARLHGEWLVPLPKG  118 (328)
T ss_dssp             CCTTCEEEEESTT-----------------------BTTTBC------------------CSSBSEEEECGGGCEECCTT
T ss_pred             CCCCCEEEEcccc-----------------------CCCCCC------------------ccceeEEEechHHeEECCCC
Confidence            9999999865321                       122223                  49999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhh--hhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          163 IDPSDASFLSCGFTTGYGAAW--KEAKVEKGS-SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~--~~~~~~~g~-~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      +++++||++++++.|||.++.  ..+++++|+ +|||+|+ |++|++++|+|+..|+ +|++++++++|+++++++|++.
T Consensus       119 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~  197 (328)
T 1xa0_A          119 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE  197 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcE
Confidence            999999999999999998764  456899997 9999998 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (375)
                      ++++.+   .+ .+.+++++++ ++|++||++|+. .++.++++++++ |+++.+|...+....++...++.|++++.++
T Consensus       198 ~i~~~~---~~-~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~  270 (328)
T 1xa0_A          198 VLARED---VM-AERIRPLDKQ-RWAAAVDPVGGR-TLATVLSRMRYG-GAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  270 (328)
T ss_dssp             EEECC-------------CCSC-CEEEEEECSTTT-THHHHHHTEEEE-EEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             EEecCC---cH-HHHHHHhcCC-cccEEEECCcHH-HHHHHHHhhccC-CEEEEEeecCCCCCCCchhhhhhcCceEEEE
Confidence            998765   32 3334555544 899999999986 889999999997 9999999775434556666677799999987


Q ss_pred             eecccc---CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          319 TFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       319 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ......   ..+.++.++++++++ ++  + ++++|||+++++|++.+.+++. +|+||++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~g-l~--~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          271 DSVYCPMDLRLRIWERLAGDLKPD-LE--R-IAQEISLAELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             CSSSCCHHHHHHHHHHHHTTTCCC-HH--H-HEEEEEGGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             ecccCCHHHHHHHHHHHHHHHHcC-Cc--e-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            422111   012345555666666 55  3 3689999999999999987765 6999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.3e-47  Score=364.88  Aligned_cols=314  Identities=20%  Similarity=0.212  Sum_probs=256.1

Q ss_pred             ccceeeEEEEecCCCC--eEE-EEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCC-------------C--CCCCcc
Q 017201            5 QAITCKAVVCWGLGEP--LKV-EEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFP-------------A--PLYPRV   64 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~--l~~-~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~-------------~--~~~p~i   64 (375)
                      .+.+|||+++.+++.+  +++ +++|.|+| +++||+|||.++|||++|++ +.|..+             .  ..+|.+
T Consensus        18 ~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v   97 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLT   97 (375)
T ss_dssp             CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBC
T ss_pred             cCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcc
Confidence            4568999999988753  888 99999985 99999999999999999999 877531             1  237999


Q ss_pred             cCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCc
Q 017201           65 LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCST  144 (375)
Q Consensus        65 ~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~  144 (375)
                      +|||++|+|+++|++|+++++||+|++.+..                          ..+                  |+
T Consensus        98 ~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~--------------------------~~~------------------G~  133 (375)
T 2vn8_A           98 LGRDVSGVVMECGLDVKYFKPGDEVWAAVPP--------------------------WKQ------------------GT  133 (375)
T ss_dssp             CCCEEEEEEEEECTTCCSCCTTCEEEEECCT--------------------------TSC------------------CS
T ss_pred             cceeeeEEEEEeCCCCCCCCCCCEEEEecCC--------------------------CCC------------------cc
Confidence            9999999999999999999999999865421                          112                  49


Q ss_pred             eeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcC----CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEE
Q 017201          145 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK----VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKII  219 (375)
Q Consensus       145 ~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~  219 (375)
                      |+||++++++.++++|+++++++||++++++.|||+++.+.++    +++|++|||+|+ |++|++++|+|+..|+ +|+
T Consensus       134 ~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi  212 (375)
T 2vn8_A          134 LSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVT  212 (375)
T ss_dssp             SBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEE
T ss_pred             ceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEE
Confidence            9999999999999999999999999999999999999877788    999999999996 9999999999999999 899


Q ss_pred             EEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEccCCC
Q 017201          220 GIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       220 ~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      +++ +++++++++++|++.++++.+   .++.+.+.+.   .++|+|||++|+. ..++.++++++++ |+++.+|....
T Consensus       213 ~~~-~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~~---~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~  284 (375)
T 2vn8_A          213 AVC-SQDASELVRKLGADDVIDYKS---GSVEEQLKSL---KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPFL  284 (375)
T ss_dssp             EEE-CGGGHHHHHHTTCSEEEETTS---SCHHHHHHTS---CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSHH
T ss_pred             EEe-ChHHHHHHHHcCCCEEEECCc---hHHHHHHhhc---CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCcc
Confidence            988 678999999999999999877   6777777653   3799999999987 4568899999997 99999986542


Q ss_pred             ccc---cchH------HHhhc-------CCceEEEEeeccccCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHH
Q 017201          299 AMV---PLNV------IALAC-------GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  362 (375)
Q Consensus       299 ~~~---~~~~------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  362 (375)
                      ...   .++.      ..++.       ++..+.+....  ...+.++++++++++|+++  ++++++|||+++++|++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~  360 (375)
T 2vn8_A          285 LNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFM--ASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLK  360 (375)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHH
T ss_pred             cccccccccchhheeehhhccccccccccCcceEEEEeC--CCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHH
Confidence            111   0111      11222       34444332211  1123578999999999987  568899999999999999


Q ss_pred             HcCCCe-eEEEEeC
Q 017201          363 LKQPDC-VKVLITI  375 (375)
Q Consensus       363 ~~~~~~-~kvvi~~  375 (375)
                      +++++. +|+||++
T Consensus       361 ~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          361 VERGHARGKTVINV  374 (375)
T ss_dssp             HHHCCCSSEEEEEC
T ss_pred             HHcCCCCCeEEEEe
Confidence            987765 6999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=8.4e-47  Score=357.18  Aligned_cols=313  Identities=20%  Similarity=0.240  Sum_probs=261.7

Q ss_pred             CCccceeeEEEE-ecC---C----CCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccC----CCC-CCCCCcccCc
Q 017201            3 NSQAITCKAVVC-WGL---G----EPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSE----GFP-APLYPRVLGH   67 (375)
Q Consensus         3 ~~~~~~~~a~~~-~~~---~----~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g----~~~-~~~~p~i~G~   67 (375)
                      +..|++|||+++ ..+   +    +.++++++|.|+| ++|||+|||.++|||++|++ +.+    .+. ...+|.++||
T Consensus         3 ~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~   82 (357)
T 2zb4_A            3 AAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG   82 (357)
T ss_dssp             ---CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred             CcccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence            456789999999 555   4    3499999999999 99999999999999999998 765    232 2357899999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceee
Q 017201           68 EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSE  147 (375)
Q Consensus        68 e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~  147 (375)
                      |++|+|++  ++|++|++||||++..                                                 |+|+|
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~~-------------------------------------------------G~~ae  111 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSFY-------------------------------------------------WPWQT  111 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEEE-------------------------------------------------EESBS
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEecC-------------------------------------------------CCcEE
Confidence            99999999  8899999999998431                                                 38999


Q ss_pred             eEEeecccEEEcCCCC-----CcccccccccchhhhhhhhhhhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEE
Q 017201          148 YMVIDANYVVKVDPSI-----DPSDASFLSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVDGARMHGAAKII  219 (375)
Q Consensus       148 ~~~v~~~~~~~lp~~~-----~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~~G~~ai~la~~~G~~~V~  219 (375)
                      |++++++.++++|+++     +++ +|+++.+++|||+++.+.+++++|  ++|||+|+ |++|++++|+|+..|+++|+
T Consensus       112 y~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi  190 (357)
T 2zb4_A          112 KVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVV  190 (357)
T ss_dssp             EEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEE
T ss_pred             EEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEE
Confidence            9999999999999998     454 778888999999998788999999  99999998 99999999999999987899


Q ss_pred             EEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201          220 GIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       220 ~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      ++++++++++.+++ +|++.+++..+   .++.+.+.+.+.+ ++|++||++|+. .++.++++++++ |+++.+|....
T Consensus       191 ~~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~~~~~~~~-~~d~vi~~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~  264 (357)
T 2zb4_A          191 GICGTHEKCILLTSELGFDAAINYKK---DNVAEQLRESCPA-GVDVYFDNVGGN-ISDTVISQMNEN-SHIILCGQISQ  264 (357)
T ss_dssp             EEESCHHHHHHHHHTSCCSEEEETTT---SCHHHHHHHHCTT-CEEEEEESCCHH-HHHHHHHTEEEE-EEEEECCCGGG
T ss_pred             EEeCCHHHHHHHHHHcCCceEEecCc---hHHHHHHHHhcCC-CCCEEEECCCHH-HHHHHHHHhccC-cEEEEECCccc
Confidence            99999999998886 99999998876   6788888888877 899999999974 889999999997 99999987643


Q ss_pred             ccccch---------HHHhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC
Q 017201          299 AMVPLN---------VIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  367 (375)
Q Consensus       299 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  367 (375)
                      ....++         ...++.+++++.++....+.  ..+.++++++++.+|++++.  +..+|||+++++|++.+.+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~  342 (357)
T 2zb4_A          265 YNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGAAFQSMMTGG  342 (357)
T ss_dssp             TTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECGGGHHHHHHHHHTTC
T ss_pred             cccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc--cceecCHHHHHHHHHHHHcCC
Confidence            112222         14566789999987643321  13457889999999999976  345699999999999998877


Q ss_pred             e-eEEEEeC
Q 017201          368 C-VKVLITI  375 (375)
Q Consensus       368 ~-~kvvi~~  375 (375)
                      . +|+||++
T Consensus       343 ~~gKvvi~~  351 (357)
T 2zb4_A          343 NIGKQIVCI  351 (357)
T ss_dssp             CSBEEEEEC
T ss_pred             CCceEEEEE
Confidence            5 6999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.5e-48  Score=371.69  Aligned_cols=311  Identities=17%  Similarity=0.166  Sum_probs=256.9

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---------------------------
Q 017201            6 AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---------------------------   57 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---------------------------   57 (375)
                      +.+|||++.......++++++|.|+|++|||+|||.+++||++|++ +.|.++                           
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            4589999987655569999999999999999999999999999999 877521                           


Q ss_pred             --CCCCCcccCcceeEEEEEeCCCC-CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCc
Q 017201           58 --APLYPRVLGHEGVGVVESAGDEV-KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQ  134 (375)
Q Consensus        58 --~~~~p~i~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~  134 (375)
                        ...+|.++|||++|+|+++|++| +++++||+|++.+                                         
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-----------------------------------------  123 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-----------------------------------------  123 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-----------------------------------------
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-----------------------------------------
Confidence              13478999999999999999999 8899999998542                                         


Q ss_pred             ceecccccCceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE--CCCHHHHHHHHHHHH
Q 017201          135 KLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL--GLGTVGLGAVDGARM  212 (375)
Q Consensus       135 ~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~--Gag~~G~~ai~la~~  212 (375)
                             .|+|+||++++++.++++|+++++++||++++...|||+++ +.+. ++|++|||+  |+|++|++++|+|++
T Consensus       124 -------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~  194 (379)
T 3iup_A          124 -------GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLK  194 (379)
T ss_dssp             -------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHH
T ss_pred             -------CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence                   14999999999999999999999999999999999999754 4455 999999999  459999999999999


Q ss_pred             cCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcc-----cC-
Q 017201          213 HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK-----VG-  286 (375)
Q Consensus       213 ~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~-----~~-  286 (375)
                      .|+ +|++++++++|+++++++|++.++++++   +++.+.+++++++.++|+|||++|++..++.++++++     ++ 
T Consensus       195 ~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G  270 (379)
T 3iup_A          195 DGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAR  270 (379)
T ss_dssp             HTC-CEEEEESSHHHHHHHHHTTCSCEEETTS---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCC
T ss_pred             CCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhcccc
Confidence            999 8999999999999999999999999987   7899999999988899999999998767788888885     32 


Q ss_pred             ---------CeEEEEEccCCCccccchHHHhhcCCceEEEEeeccccC---C----CCHHHHHHHHHcCCCCCCcceeeE
Q 017201          287 ---------KGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---K----SDLPTLLDKCKNKEFKLHQLLTHH  350 (375)
Q Consensus       287 ---------~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~  350 (375)
                               +|+++.+|.....  .++...++.+++++.++.+..+..   .    +.++++++++.+ .++  +.++++
T Consensus       271 ~~~~~G~~~~g~iv~~G~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~--~~i~~~  345 (379)
T 3iup_A          271 EYSRYGSTTHKQVYLYGGLDTS--PTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFA--SHYSKE  345 (379)
T ss_dssp             SCCTTCCCSCEEEEECCCSEEE--EEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTC--CCCSEE
T ss_pred             ceeecccccCceEEEecCCCCC--ccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCC--CcceEE
Confidence                     1566666654322  233334566889999976554311   1    123555666666 444  568899


Q ss_pred             eecccH--HHHHHHHcCCCe-eEEEEeC
Q 017201          351 VKLEEI--DKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       351 ~~~~~~--~~a~~~~~~~~~-~kvvi~~  375 (375)
                      |||+++  ++|++.+.+++. +|+||++
T Consensus       346 ~~l~~~~~~~A~~~l~~~~~~gKvVv~~  373 (379)
T 3iup_A          346 ISLAEVLDLDMIAVYNKRATGEKYLINP  373 (379)
T ss_dssp             EEHHHHTCHHHHHHHTTCCTTCCEEEET
T ss_pred             ecHHHhhhHHHHHHHhcCCCCceEEEeC
Confidence            999999  999999988866 6999974

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.5e-46  Score=345.92  Aligned_cols=294  Identities=20%  Similarity=0.263  Sum_probs=246.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++.+++.+..++++|.|+|+++||+|||.+++||++|++ +.|.++. +.+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            7999999998776778999999999999999999999999999 8886653 4689999999999997           9


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |||++.+.                             +                  |+|+||++++++.++++|++++++
T Consensus        70 drV~~~~~-----------------------------~------------------G~~aey~~v~~~~~~~iP~~~~~~  102 (302)
T 1iz0_A           70 RRYAALVP-----------------------------Q------------------GGLAERVAVPKGALLPLPEGLSPE  102 (302)
T ss_dssp             EEEEEECS-----------------------------S------------------CCSBSEEEEEGGGCEECCTTCCHH
T ss_pred             cEEEEecC-----------------------------C------------------cceeeEEEEcHHHcEeCCCCCCHH
Confidence            99985431                             1                  399999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      +||++++++.|||+++.+.+ +++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.++++.+ 
T Consensus       103 ~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~-  179 (302)
T 1iz0_A          103 EAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAE-  179 (302)
T ss_dssp             HHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGG-
T ss_pred             HHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCc-
Confidence            99999999999999987677 999999999998 9999999999999999 9999999999999999999999887642 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc-c
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI-K  324 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  324 (375)
                       .+++.+.+      .++|++|| +|+. .++.++++++++ |+++.+|........++...++.+++++.++....+ .
T Consensus       180 -~~~~~~~~------~~~d~vid-~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  249 (302)
T 1iz0_A          180 -VPERAKAW------GGLDLVLE-VRGK-EVEESLGLLAHG-GRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLR  249 (302)
T ss_dssp             -HHHHHHHT------TSEEEEEE-CSCT-THHHHHTTEEEE-EEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTT
T ss_pred             -chhHHHHh------cCceEEEE-CCHH-HHHHHHHhhccC-CEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhh
Confidence             02343333      37999999 9884 899999999997 999999877543335666667779999999865432 1


Q ss_pred             CCCCHHHHHH---HHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          325 TKSDLPTLLD---KCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       325 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      ..+.++++++   ++.+|+++  ++++++||++++++|++.+.+++. +|+|+++
T Consensus       250 ~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          250 EGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             CHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             hHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            2345788889   99999987  558899999999999999988765 6999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.7e-43  Score=330.11  Aligned_cols=308  Identities=19%  Similarity=0.192  Sum_probs=254.0

Q ss_pred             ccceeeEEEEecC--C----CCeEEEEeecCCCCCCeEEEEEeeeecCCCcccccCCCCCCCCCcccCcceeEEEEEeCC
Q 017201            5 QAITCKAVVCWGL--G----EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGD   78 (375)
Q Consensus         5 ~~~~~~a~~~~~~--~----~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~~~p~i~G~e~~G~Vv~vG~   78 (375)
                      .+++|||+++.+.  +    +.++++++|.|+|++|||+|||.++|||+.|..+..   ...+|.++|||++|+|++.  
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~~~---~~~~p~~~g~e~~G~Vv~~--   78 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK---RLKEGAVMMGQQVARVVES--   78 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHTT---TCCTTSBCCCCEEEEEEEE--
T ss_pred             ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccccC---cCCCCcccccceEEEEEec--
Confidence            4678999999874  3    349999999999999999999999999998874321   2346789999999999995  


Q ss_pred             CCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEE
Q 017201           79 EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK  158 (375)
Q Consensus        79 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  158 (375)
                      +++++++||||++.                                                  |+|+||++++++.+++
T Consensus        79 ~v~~~~vGdrV~~~--------------------------------------------------g~~aey~~v~~~~~~~  108 (333)
T 1v3u_A           79 KNSAFPAGSIVLAQ--------------------------------------------------SGWTTHFISDGKGLEK  108 (333)
T ss_dssp             SCTTSCTTCEEEEC--------------------------------------------------CCSBSEEEESSTTEEE
T ss_pred             CCCCCCCCCEEEec--------------------------------------------------CceEEEEEechHHeEE
Confidence            57889999999732                                                  3899999999999999


Q ss_pred             cCCC----CCccc-ccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          159 VDPS----IDPSD-ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       159 lp~~----~~~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      +|++    +++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++
T Consensus       109 iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~  187 (333)
T 1v3u_A          109 LLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLK  187 (333)
T ss_dssp             CC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             cCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence            9997    88887 48889999999999878889999999999998 9999999999999999 9999999999999999


Q ss_pred             hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-----cc-cchHH
Q 017201          233 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-----MV-PLNVI  306 (375)
Q Consensus       233 ~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-----~~-~~~~~  306 (375)
                      ++|++.++|..+  .+++.+.+.+.+.+ ++|++||++|.. .+..++++++++ |+++.+|.....     .. ..+..
T Consensus       188 ~~g~~~~~d~~~--~~~~~~~~~~~~~~-~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  262 (333)
T 1v3u_A          188 QIGFDAAFNYKT--VNSLEEALKKASPD-GYDCYFDNVGGE-FLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPE  262 (333)
T ss_dssp             HTTCSEEEETTS--CSCHHHHHHHHCTT-CEEEEEESSCHH-HHHHHHTTEEEE-EEEEECCCCC-------CCBCCCHH
T ss_pred             hcCCcEEEecCC--HHHHHHHHHHHhCC-CCeEEEECCChH-HHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCHH
Confidence            999988887654  24677778777764 899999999986 789999999997 999999976531     11 23556


Q ss_pred             HhhcCCceEEEEeecccc---CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          307 ALACGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .++.+++++.|+....+.   ..+.++++++++.+|++++..  ..+++|+++++|++.+.+++. +|+||++
T Consensus       263 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          263 SIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHE--HVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCE--EEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcc--ccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            677899999997654321   123567899999999999764  345799999999999988765 6999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.6e-44  Score=371.57  Aligned_cols=302  Identities=22%  Similarity=0.263  Sum_probs=254.0

Q ss_pred             EEEEecCCC--CeEEEEeec--CCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201           11 AVVCWGLGE--PLKVEEIQV--EPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus        11 a~~~~~~~~--~l~~~~~~~--p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      .+....+|.  .+++++.+.  |+|++|||+|||.++|||++|++ +.|.++   .|.++|||++|+|+++|++|++|++
T Consensus       212 ~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~v  288 (795)
T 3slk_A          212 RLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAP  288 (795)
T ss_dssp             CEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCT
T ss_pred             EEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCC
Confidence            344555553  388877764  57899999999999999999999 888764   3567999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||||++..                                                .|+|+||++++++.++++|+++++
T Consensus       289 GDrV~~~~------------------------------------------------~G~~ae~~~v~~~~~~~iP~~ls~  320 (795)
T 3slk_A          289 GDRVMGMI------------------------------------------------PKAFGPLAVADHRMVTRIPAGWSF  320 (795)
T ss_dssp             TCEEEECC------------------------------------------------SSCSSSEEEEETTSEEECCTTCCH
T ss_pred             CCEEEEEe------------------------------------------------cCCCcCEEEeehHHEEECCCCCCH
Confidence            99997431                                                138999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      ++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+||+.|+ +|+++++++ |.++++ +|+++++++++
T Consensus       321 ~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~~  397 (795)
T 3slk_A          321 ARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSRT  397 (795)
T ss_dssp             HHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSSS
T ss_pred             HHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecCC
Confidence            9999999999999999988999999999999997 9999999999999999 899998665 666666 99999999987


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc-
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI-  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  323 (375)
                         .++.+.+++.++++|+|+|||+++++ .++.++++++++ |+++.+|.... ........ ..+++++.+..+... 
T Consensus       398 ---~~~~~~i~~~t~g~GvDvVld~~gg~-~~~~~l~~l~~~-Gr~v~iG~~~~-~~~~~~~~-~~~~~~~~~~~l~~~~  470 (795)
T 3slk_A          398 ---CDFEQQFLGATGGRGVDVVLNSLAGE-FADASLRMLPRG-GRFLELGKTDV-RDPVEVAD-AHPGVSYQAFDTVEAG  470 (795)
T ss_dssp             ---STHHHHHHHHSCSSCCSEEEECCCTT-TTHHHHTSCTTC-EEEEECCSTTC-CCHHHHHH-HSSSEEEEECCGGGGH
T ss_pred             ---hhHHHHHHHHcCCCCeEEEEECCCcH-HHHHHHHHhcCC-CEEEEeccccc-cCcccccc-cCCCCEEEEeeccccC
Confidence               78999999999999999999999986 889999999998 99999997653 11112222 237777776543211 


Q ss_pred             --cCCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          324 --KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                        ...+.+.++++++++|++++  +++++||++++++||+.+.++++ +|+||++
T Consensus       471 ~~~~~~~l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          471 PQRIGEMLHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceEEEec
Confidence              11245788999999999985  57889999999999999988877 5999974

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=8.3e-44  Score=335.17  Aligned_cols=313  Identities=19%  Similarity=0.191  Sum_probs=251.8

Q ss_pred             CccceeeEEEEecCCC-CeEEE--EeecCC-CCCCeEEEEEeeeecCCCcccccCCCCC----CCCCcccCcceeEEEEE
Q 017201            4 SQAITCKAVVCWGLGE-PLKVE--EIQVEP-PKSTEVRVKMLYASVCHTDILCSEGFPA----PLYPRVLGHEGVGVVES   75 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~-~l~~~--~~~~p~-~~~~ev~V~v~~~~i~~~D~~~~g~~~~----~~~p~i~G~e~~G~Vv~   75 (375)
                      |+.+.|+++++.+++. .++++  ++|.|. |++|||+|||.++++|+.|..+.|....    ..+|.++|||++|++++
T Consensus         5 mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~~~~g~~~~~~~~~~~p~v~G~e~~G~~~~   84 (345)
T 2j3h_A            5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPIQGYGVS   84 (345)
T ss_dssp             EEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHHHHHBC---------CCCCTTSBCEEEEEE
T ss_pred             ceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHHhhcccCCCCccccCCCcCCCCeeecceEE
Confidence            3444555555555553 48888  888886 8999999999999988877444454322    24689999999999999


Q ss_pred             --eCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeec
Q 017201           76 --AGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA  153 (375)
Q Consensus        76 --vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~  153 (375)
                        +|+++++|++||||++.                                                  |+|+||+.+++
T Consensus        85 GvV~~~v~~~~vGdrV~~~--------------------------------------------------g~~aey~~v~~  114 (345)
T 2j3h_A           85 RIIESGHPDYKKGDLLWGI--------------------------------------------------VAWEEYSVITP  114 (345)
T ss_dssp             EEEEECSTTCCTTCEEEEE--------------------------------------------------EESBSEEEECC
T ss_pred             EEEecCCCCCCCCCEEEee--------------------------------------------------cCceeEEEecc
Confidence              99999999999999732                                                  38999999998


Q ss_pred             cc--EEEcCC---CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017201          154 NY--VVKVDP---SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK  227 (375)
Q Consensus       154 ~~--~~~lp~---~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~  227 (375)
                      +.  ++++|+   +++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++
T Consensus       115 ~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~  192 (345)
T 2j3h_A          115 MTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEK  192 (345)
T ss_dssp             CTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHH
T ss_pred             cccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH
Confidence            76  999996   34554 67888899999999878889999999999998 9999999999999999 99999999999


Q ss_pred             HHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc-----cc
Q 017201          228 KEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-----MV  301 (375)
Q Consensus       228 ~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-----~~  301 (375)
                      ++.++ ++|++.++|..+  ..++.+.+++.++ .++|++||++|+. .++.++++++++ |+++.+|.....     ..
T Consensus       193 ~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~-~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~  267 (345)
T 2j3h_A          193 VDLLKTKFGFDDAFNYKE--ESDLTAALKRCFP-NGIDIYFENVGGK-MLDAVLVNMNMH-GRIAVCGMISQYNLENQEG  267 (345)
T ss_dssp             HHHHHHTSCCSEEEETTS--CSCSHHHHHHHCT-TCEEEEEESSCHH-HHHHHHTTEEEE-EEEEECCCGGGTTCSSCCC
T ss_pred             HHHHHHHcCCceEEecCC--HHHHHHHHHHHhC-CCCcEEEECCCHH-HHHHHHHHHhcC-CEEEEEccccccccCCccc
Confidence            99998 799999888765  1366777777765 4899999999985 889999999997 999999876421     23


Q ss_pred             cchHHHhhcCCceEEEEeecccc--CCCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          302 PLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .++...++.+++++.++....+.  ..+.++++++++.+|+++  +++..+|+|+++++|++.+.+++. +|+||.+
T Consensus       268 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~--~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          268 VHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKIT--YVEDVADGLEKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             BSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSC--CCEEEEESGGGSHHHHHHHHTTCCSSEEEEES
T ss_pred             cccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCc--CcccccCCHHHHHHHHHHHHcCCCceEEEEEe
Confidence            45566677799999887543321  112378899999999998  456778999999999999988776 5999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=1.1e-33  Score=318.87  Aligned_cols=290  Identities=17%  Similarity=0.162  Sum_probs=235.1

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeeeecCCCccc-ccCCCCCC-------CCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 017201           21 LKVEEIQVEP-PK--STEVRVKMLYASVCHTDIL-CSEGFPAP-------LYPRVLGHEGVGVVESAGDEVKEVKEGDIV   89 (375)
Q Consensus        21 l~~~~~~~p~-~~--~~ev~V~v~~~~i~~~D~~-~~g~~~~~-------~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd~V   89 (375)
                      +.+.+.+... +.  ++||+|+|.++|+|+.|++ ..|.++..       ..|.++|+|++|+|          ++||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEE
Confidence            6666655433 33  7999999999999999999 88765421       24568999999987          279999


Q ss_pred             EeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCccccc
Q 017201           90 IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS  169 (375)
Q Consensus        90 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa  169 (375)
                      +..                             ..+                  |+|+||++++++.++++|+++++++||
T Consensus      1614 ~g~-----------------------------~~~------------------G~~Aeyv~vp~~~v~~iPd~ls~~eAA 1646 (2512)
T 2vz8_A         1614 MGM-----------------------------VPA------------------EGLATSVLLLQHATWEVPSTWTLEEAA 1646 (2512)
T ss_dssp             EEE-----------------------------CSS------------------CCSBSEEECCGGGEEECCTTSCHHHHT
T ss_pred             EEe-----------------------------ecC------------------CceeeEEEcccceEEEeCCCCCHHHHH
Confidence            743                             222                  399999999999999999999999999


Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCC
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDD  244 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~  244 (375)
                      +++++++|||+++.+.+++++|++|||+|+ |++|++++|+||+.|+ +|++++++++|++++++    +|+++++++++
T Consensus      1647 ~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~ 1725 (2512)
T 2vz8_A         1647 SVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRD 1725 (2512)
T ss_dssp             TSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSS
T ss_pred             HhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCC
Confidence            999999999999988899999999999987 9999999999999999 99999999999999885    78899999887


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                         .++.+.+++.++++|+|+|||++++ +.+..++++++++ |+++.+|.............++.+++++.++....+.
T Consensus      1726 ---~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 1800 (2512)
T 2vz8_A         1726 ---TSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLF 1800 (2512)
T ss_dssp             ---SHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTT
T ss_pred             ---HHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHHh
Confidence               7899999999998899999999985 4899999999997 9999998653211111122344589999987654321


Q ss_pred             C--CCCHHHHHHHH----HcCCCCCCcceeeEeecccHHHHHHHHcCCCe-eEEEEeC
Q 017201          325 T--KSDLPTLLDKC----KNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLITI  375 (375)
Q Consensus       325 ~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvi~~  375 (375)
                      .  ...+.++++++    .+++++  ++++++||++++++|++.+.+++. +|+||++
T Consensus      1801 ~~~~~~~~~~l~~l~~~~~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1801 EEGGATWQEVSELLKAGIQEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             SSCCHHHHHHHHHHHHHHTTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSEEEEEC
T ss_pred             hhCHHHHHHHHHHHHHHHHcCCcC--CCcceEecHHHHHHHHHhhhccCccceEEEEC
Confidence            1  22345555554    466666  557899999999999999998877 5999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.89  E-value=3.1e-23  Score=179.17  Aligned_cols=184  Identities=17%  Similarity=0.276  Sum_probs=140.6

Q ss_pred             ccEEEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          154 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       154 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      +.++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            5688999999999999999999999999877789999999999996 9999999999999999 9999999999998999


Q ss_pred             hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcC
Q 017201          233 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACG  311 (375)
Q Consensus       233 ~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~  311 (375)
                      ++|++.+++..+   .++.+.+.+.+.+.++|++||++|.. .++.++++++++ |+++.+|.... ....++.. ++.+
T Consensus        81 ~~g~~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS---VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPG-GRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC---STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc---HHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccC-CEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988888776   57777887777666899999999865 889999999997 99999987652 12234433 3358


Q ss_pred             CceEEEEee------ccccCCCCHHHHHHHHHcCCCCCC
Q 017201          312 GRTLKGTTF------GGIKTKSDLPTLLDKCKNKEFKLH  344 (375)
Q Consensus       312 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  344 (375)
                      ++++.+...      ......+.++++++++++|++++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            888886532      111113467889999999999865

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.25  E-value=4.8e-12  Score=112.39  Aligned_cols=167  Identities=13%  Similarity=0.011  Sum_probs=111.2

Q ss_pred             CCCCCEEEeec-------cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc
Q 017201           83 VKEGDIVIPTY-------IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY  155 (375)
Q Consensus        83 ~~~Gd~V~~~~-------~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  155 (375)
                      +++||+|++.+       ...|+.|.+|+.|..+.|...-.     .                 +  |+..      +..
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-----~-----------------~--G~~~------~~~   53 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-----P-----------------E--GVKI------NGF   53 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-----C-----------------T--TEEE------TTE
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-----C-----------------C--CCEE------EEE
Confidence            89999999988       78899999999999988864211     0                 0  1221      233


Q ss_pred             EEEcCCCCCcccccc-----cccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201          156 VVKVDPSIDPSDASF-----LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  230 (375)
Q Consensus       156 ~~~lp~~~~~~~aa~-----l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~  230 (375)
                      +++.|+...+.+.+.     +......+  .+....++.++++||.+|+| .|..+..+++. +. +|++++.+++..+.
T Consensus        54 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~  128 (248)
T 2yvl_A           54 EVYRPTLEEIILLGFERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKT  128 (248)
T ss_dssp             EEECCCHHHHHHHTSCCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHH
T ss_pred             EEeCCCHHHHHHhcCcCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHH
Confidence            444443322221111     11121222  24466788999999999998 69999999998 66 99999999998887


Q ss_pred             hhhc----CC---cEEeCCCCCCcccHHHHHHhhc-CCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEcc
Q 017201          231 GKAF----GM---TDFINPDDEPNKSISELVKGIT-HGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       231 ~~~l----g~---~~v~~~~~~~~~~~~~~i~~~~-~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +++.    +.   ..++.. +     +    .+.. .+.++|+|+...+.+ ..++.+.+.|+++ |+++....
T Consensus       129 a~~~~~~~~~~~~~~~~~~-d-----~----~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          129 AQKNLKKFNLGKNVKFFNV-D-----F----KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHTTCCTTEEEECS-C-----T----TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHcCCCCcEEEEEc-C-----h----hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            7643    32   112221 1     1    1112 234799999988766 6899999999998 99888754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.97  E-value=6e-12  Score=119.95  Aligned_cols=183  Identities=12%  Similarity=0.126  Sum_probs=126.9

Q ss_pred             cccCcceeEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceeccccc
Q 017201           63 RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSC  142 (375)
Q Consensus        63 ~i~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  142 (375)
                      ...|++.++.|.++|++++++.+|+.++.-..         +.              ++.               .....
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qv---------k~--------------~~~---------------~~~~~  116 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQV---------KK--------------AYD---------------RAARL  116 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHH---------HH--------------HHH---------------HHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHH---------HH--------------HHH---------------HHHHc
Confidence            35699999999999999999999998742110         00              000               00001


Q ss_pred             CceeeeEEeecccEEEcCCCCCcccccccccchhhhhhhhhhhc---CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEE
Q 017201          143 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA---KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII  219 (375)
Q Consensus       143 g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~  219 (375)
                      |++++|.......++++|++++.+.++.. .+..++|.++....   +-.+|++|+|+|+|.+|.++++.++..|+++|+
T Consensus       117 G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~  195 (404)
T 1gpj_A          117 GTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVL  195 (404)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEE
T ss_pred             CCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEE
Confidence            36777777777888888988877776653 36677777653211   135899999999999999999999999987899


Q ss_pred             EEcCChhhH-HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHH--HHHHh--c--ccCCeEEEE
Q 017201          220 GIDKNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS--EALET--T--KVGKGKVIV  292 (375)
Q Consensus       220 ~~~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~--~~~~~--l--~~~~G~iv~  292 (375)
                      ++++++++. ++++++|++ +++.     .++.+.+      .++|+||++++.+..+.  ..+..  +  +++ +.++.
T Consensus       196 v~~r~~~ra~~la~~~g~~-~~~~-----~~l~~~l------~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~  262 (404)
T 1gpj_A          196 VANRTYERAVELARDLGGE-AVRF-----DELVDHL------ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILI  262 (404)
T ss_dssp             EECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHH------HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEE
T ss_pred             EEeCCHHHHHHHHHHcCCc-eecH-----HhHHHHh------cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEE
Confidence            999999886 677888876 3332     2343332      16999999998654322  44554  3  455 66777


Q ss_pred             EccCC
Q 017201          293 IGVGV  297 (375)
Q Consensus       293 ~g~~~  297 (375)
                      ++...
T Consensus       263 vdia~  267 (404)
T 1gpj_A          263 IDIAN  267 (404)
T ss_dssp             EECCS
T ss_pred             EEccC
Confidence            76543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.83  E-value=6.8e-09  Score=97.32  Aligned_cols=139  Identities=18%  Similarity=0.131  Sum_probs=98.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--EeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +++|+|+|+|++|++++++++.+|+ +|++++++++|++.+++++...  +++...   .++.+.+.      ++|+||+
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~DvVI~  236 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA------EADLLIG  236 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH------TCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHc------CCCEEEE
Confidence            4999999999999999999999999 9999999999999988776543  333332   34444332      6999999


Q ss_pred             ccCChhh------HHHHHHhcccCCeEEEEEccCCCc------cccchHHHhhcCCceEEEEeeccc---------cCCC
Q 017201          269 CTGVPSL------LSEALETTKVGKGKVIVIGVGVDA------MVPLNVIALACGGRTLKGTTFGGI---------KTKS  327 (375)
Q Consensus       269 ~~g~~~~------~~~~~~~l~~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  327 (375)
                      +++.+..      .+.++..++++ |.++.++...+.      ..+++...+..+++++.+...-..         ....
T Consensus       237 ~~~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~  315 (361)
T 1pjc_A          237 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNS  315 (361)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHH
T ss_pred             CCCcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHH
Confidence            9986532      56788999997 999999865432      334555556668888776431110         0122


Q ss_pred             CHHHHHHHHHcCC
Q 017201          328 DLPTLLDKCKNKE  340 (375)
Q Consensus       328 ~~~~~~~~~~~~~  340 (375)
                      .++.+++++.+|.
T Consensus       316 ~~~~l~~l~~~G~  328 (361)
T 1pjc_A          316 TLPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHHGG
T ss_pred             HHHHHHHHHhCCc
Confidence            3466777777663

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.74  E-value=2.3e-08  Score=94.57  Aligned_cols=147  Identities=19%  Similarity=0.220  Sum_probs=98.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCC------------Cccc----HHH
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDE------------PNKS----ISE  252 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~------------~~~~----~~~  252 (375)
                      +|++|+|+|+|.+|++++++|+.+|+ +|+++++++++++.++++|++.+ ++..+.            ..++    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            78999999999999999999999999 89999999999998888998765 222110            0000    112


Q ss_pred             HHHhhcCCCCccEEEEcc---CChh--h-HHHHHHhcccCCeEEEEEccCCCcc--ccchHHHhhcCCceEEEEeecccc
Q 017201          253 LVKGITHGMGVDYCFECT---GVPS--L-LSEALETTKVGKGKVIVIGVGVDAM--VPLNVIALACGGRTLKGTTFGGIK  324 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~---g~~~--~-~~~~~~~l~~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  324 (375)
                      .+.+...  ++|+||+++   |.+.  . ...+++.++++ +.++.++...+..  ...+...+..+++++.++..  . 
T Consensus       250 ~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~--~-  323 (384)
T 1l7d_A          250 AVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN--V-  323 (384)
T ss_dssp             HHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS--G-
T ss_pred             HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC--C-
Confidence            2333333  599999999   5321  2 26789999997 9999998653212  12233345568888887642  1 


Q ss_pred             CCCCHHHHHHHHHcCCCCC
Q 017201          325 TKSDLPTLLDKCKNKEFKL  343 (375)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~  343 (375)
                      .......+.+++.++.+++
T Consensus       324 p~~~~~~a~~l~~~~~~~~  342 (384)
T 1l7d_A          324 PSRVAADASPLFAKNLLNF  342 (384)
T ss_dssp             GGGGHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHhHHHH
Confidence            1122445778877776653

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.72  E-value=6.5e-09  Score=100.47  Aligned_cols=158  Identities=16%  Similarity=0.220  Sum_probs=106.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      ..+|++|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++++|++ ++        ++.+.+      .+.|+|+
T Consensus       271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~--------~l~e~l------~~aDvVi  334 (494)
T 3ce6_A          271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV--------TVEEAI------GDADIVV  334 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHHHG------GGCSEEE
T ss_pred             CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee--------cHHHHH------hCCCEEE
Confidence            7899999999999999999999999999 999999999998888889986 22        122221      2689999


Q ss_pred             EccCChhhHH-HHHHhcccCCeEEEEEccCCCccccchHHHhhcCCc---eEEEEeeccccCCCCHHHHHHHHHcCCCC-
Q 017201          268 ECTGVPSLLS-EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR---TLKGTTFGGIKTKSDLPTLLDKCKNKEFK-  342 (375)
Q Consensus       268 d~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  342 (375)
                      +++++...+. ..++.++++ ++++.+|....   .++...+..+.+   ++.+.. ..+.. ..+...+.++..+++. 
T Consensus       335 ~atgt~~~i~~~~l~~mk~g-gilvnvG~~~~---eId~~aL~~~aL~~~~I~~~l-dv~~~-~~~~~~l~LL~~grlvn  408 (494)
T 3ce6_A          335 TATGNKDIIMLEHIKAMKDH-AILGNIGHFDN---EIDMAGLERSGATRVNVKPQV-DLWTF-GDTGRSIIVLSEGRLLN  408 (494)
T ss_dssp             ECSSSSCSBCHHHHHHSCTT-CEEEECSSSGG---GBCHHHHHHTTCEEEEEETTE-EEEEC-TTTCCEEEEEGGGSCHH
T ss_pred             ECCCCHHHHHHHHHHhcCCC-cEEEEeCCCCC---ccCHHHHHHhhhccceEEEEE-EEeec-CCcchHHHHHhCCCEEe
Confidence            9999876565 788999997 99999986541   355556654444   444321 11111 1111223344455553 


Q ss_pred             ---CC----cceeeEeecccHHHHHHHHcCCCe
Q 017201          343 ---LH----QLLTHHVKLEEIDKAIQLLKQPDC  368 (375)
Q Consensus       343 ---~~----~~~~~~~~~~~~~~a~~~~~~~~~  368 (375)
                         ..    ..+++.+ .+++.++++.+.+++.
T Consensus       409 L~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~~  440 (494)
T 3ce6_A          409 LGNATGHPSFVMSNSF-ANQTIAQIELWTKNDE  440 (494)
T ss_dssp             HHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGGG
T ss_pred             ccCCCCCccccchHHH-HHHHHHHHHHHHcCCC
Confidence               11    1222333 5678888888877654

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.65  E-value=7.1e-08  Score=90.88  Aligned_cols=120  Identities=20%  Similarity=0.160  Sum_probs=86.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -+|++|+|+|+|.+|+.++++++.+|+ +|+++++++++++.+++ +|+....+...  ..++.+.+.      ++|+||
T Consensus       166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~--~~~l~~~l~------~aDvVi  236 (377)
T 2vhw_A          166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS--AYELEGAVK------RADLVI  236 (377)
T ss_dssp             BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC--HHHHHHHHH------HCSEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC--HHHHHHHHc------CCCEEE
Confidence            368999999999999999999999999 99999999999888876 67653222211  123333332      689999


Q ss_pred             EccCChhh------HHHHHHhcccCCeEEEEEccCCC------ccccchHHHhhcCCceEEEE
Q 017201          268 ECTGVPSL------LSEALETTKVGKGKVIVIGVGVD------AMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       268 d~~g~~~~------~~~~~~~l~~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~~~~~  318 (375)
                      ++++.+..      ....+..++++ +.++.++...+      ++.+++...+..+++.+.+.
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~  298 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCV  298 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECB
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCC-cEEEEEecCCCCccccccCCCCCCCEEEECCEEEEec
Confidence            99976633      57888999997 99999985432      23334444455577776543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.61  E-value=1.1e-07  Score=90.25  Aligned_cols=126  Identities=22%  Similarity=0.297  Sum_probs=86.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCC----------CcccH----HHHH
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDE----------PNKSI----SELV  254 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~----------~~~~~----~~~i  254 (375)
                      +|++|+|+|+|.+|+.++++|+.+|+ +|+++++++++++.++++|++.+. +..+.          ...++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            68999999999999999999999999 899999999999988899987542 21000          00111    1123


Q ss_pred             HhhcCCCCccEEEEccCCh-----hhH-HHHHHhcccCCeEEEEEccCCCccccch--HH-HhhcCCceEEEEe
Q 017201          255 KGITHGMGVDYCFECTGVP-----SLL-SEALETTKVGKGKVIVIGVGVDAMVPLN--VI-ALACGGRTLKGTT  319 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~-----~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~--~~-~~~~~~~~~~~~~  319 (375)
                      .+...  ++|+||++++.+     ..+ ..+++.++++ +.++.++...+....++  .. .+..+++++.++.
T Consensus       250 ~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            33332  589999995321     223 5789999997 99999986532222222  11 1445788888764

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.61  E-value=1.7e-07  Score=88.09  Aligned_cols=141  Identities=22%  Similarity=0.185  Sum_probs=89.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      ++++|+|+|+|.+|+.++++++.+|+ +|+++++++++.+.+++ +|.....+..+  ..++.+.+.      ++|+||+
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~------~~DvVi~  235 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ------HADLLIG  235 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH------HCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC--HHHHHHHHh------CCCEEEE
Confidence            46999999999999999999999999 99999999999887765 77653333222  133333332      6999999


Q ss_pred             ccCChhh------HHHHHHhcccCCeEEEEEccCCCc------cccchHHHhhcCCceEEEEeeccc---------cCCC
Q 017201          269 CTGVPSL------LSEALETTKVGKGKVIVIGVGVDA------MVPLNVIALACGGRTLKGTTFGGI---------KTKS  327 (375)
Q Consensus       269 ~~g~~~~------~~~~~~~l~~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  327 (375)
                      +++.+..      .+.++..++++ |.++.++...+.      +.+++...+..+++++.+...-..         ....
T Consensus       236 ~~g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~  314 (369)
T 2eez_A          236 AVLVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQ  314 (369)
T ss_dssp             CCC-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHH
T ss_pred             CCCCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHH
Confidence            9986531      57788999997 999999866431      223444445557787766431110         0123


Q ss_pred             CHHHHHHHHHcCC
Q 017201          328 DLPTLLDKCKNKE  340 (375)
Q Consensus       328 ~~~~~~~~~~~~~  340 (375)
                      .++.+++++.+|.
T Consensus       315 ~~~~l~~l~~~g~  327 (369)
T 2eez_A          315 TLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCh
Confidence            3556677776653

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.33  E-value=3.3e-06  Score=75.93  Aligned_cols=102  Identities=22%  Similarity=0.246  Sum_probs=73.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCC-c--EEeCCCCCCcccHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGM-T--DFINPDDEPNKSISEL  253 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~-~--~v~~~~~~~~~~~~~~  253 (375)
                      +.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+. +  .++.. +     +.  
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d-----~~--  174 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-D-----IS--  174 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-C-----GG--
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-C-----HH--
Confidence            44567889999999999986 888899999864 3499999999988887754    343 1  12221 1     11  


Q ss_pred             HHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEcc
Q 017201          254 VKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                        +......+|+|+.....+ ..+..+.++|+++ |.++.+..
T Consensus       175 --~~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          175 --EGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             --GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             --HcccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence              112223699998876655 5788999999997 99888754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.22  E-value=4.7e-06  Score=78.23  Aligned_cols=126  Identities=23%  Similarity=0.281  Sum_probs=84.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC----------C---CcccH----HH
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD----------E---PNKSI----SE  252 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~----------~---~~~~~----~~  252 (375)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.++++++++.++++|++.+.....          +   ..+++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67999999999999999999999999 9999999999999999999864321100          0   00000    11


Q ss_pred             HHHhhcCCCCccEEEEccCChh------hHHHHHHhcccCCeEEEEEccCCCccccc--hHHHhhcCCceEEEEe
Q 017201          253 LVKGITHGMGVDYCFECTGVPS------LLSEALETTKVGKGKVIVIGVGVDAMVPL--NVIALACGGRTLKGTT  319 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g~~~------~~~~~~~~l~~~~G~iv~~g~~~~~~~~~--~~~~~~~~~~~~~~~~  319 (375)
                      .+.+...  +.|+||.++..+.      .-+..++.++++ +.++.++...+.....  +...+..+++++.+..
T Consensus       268 ~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTCSBTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCCCccccCCCCeEEECCEEEEEeC
Confidence            2222222  6999999964221      236889999997 9999998643312211  1112334677777654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.20  E-value=3.6e-06  Score=78.34  Aligned_cols=105  Identities=23%  Similarity=0.261  Sum_probs=76.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC------CCCC---cc----cHHHHHHh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP------DDEP---NK----SISELVKG  256 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~------~~~~---~~----~~~~~i~~  256 (375)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.++++++++.++++|++.+...      ....   .+    ...+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            78999999999999999999999999 89999999999999999998653210      0000   00    00112223


Q ss_pred             hcCCCCccEEEEccCChh------hHHHHHHhcccCCeEEEEEccCCC
Q 017201          257 ITHGMGVDYCFECTGVPS------LLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~~------~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      ...  +.|+||.++..+.      ..+..++.++++ +.++.++...+
T Consensus       262 ~l~--~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~G  306 (381)
T 3p2y_A          262 AIT--KFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETG  306 (381)
T ss_dssp             HHT--TCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGT
T ss_pred             HHh--cCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCC
Confidence            322  6999999863321      236889999997 99999986654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.14  E-value=1.6e-05  Score=64.81  Aligned_cols=92  Identities=20%  Similarity=0.199  Sum_probs=65.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ...++++|+|+|+|.+|...++.++..|+ +|+++++++++.+.++ +.|...+.. +.   .+. +.+.+. +-.++|+
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~-d~---~~~-~~l~~~-~~~~ad~   87 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVG-DA---AEF-ETLKEC-GMEKADM   87 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEES-CT---TSH-HHHHTT-TGGGCSE
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEe-cC---CCH-HHHHHc-CcccCCE
Confidence            45678999999999999999999999998 9999999999988887 677654432 11   121 223322 2237999


Q ss_pred             EEEccCChhhHHHHHHhccc
Q 017201          266 CFECTGVPSLLSEALETTKV  285 (375)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~  285 (375)
                      ||.+++.+.....+...++.
T Consensus        88 Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           88 VFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHH
Confidence            99999987555555555544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.05  E-value=3e-06  Score=68.29  Aligned_cols=107  Identities=13%  Similarity=0.074  Sum_probs=75.1

Q ss_pred             hhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHH
Q 017201          175 FTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISEL  253 (375)
Q Consensus       175 ~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~  253 (375)
                      ++.++.++ +.+....+++|+|+|+|.+|.+.++.++..|+ +|++.++++++.+. +++++.... ..     .++.+.
T Consensus         6 ~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~-----~~~~~~   77 (144)
T 3oj0_A            6 VSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LI-----NDIDSL   77 (144)
T ss_dssp             CSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-EC-----SCHHHH
T ss_pred             ccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-ee-----cCHHHH
Confidence            45556554 34455569999999999999998888888898 69999999988765 566775432 22     233333


Q ss_pred             HHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +.      ++|+||.+++....+.. ...++++ +.++.++.+.
T Consensus        78 ~~------~~Divi~at~~~~~~~~-~~~l~~g-~~vid~~~p~  113 (144)
T 3oj0_A           78 IK------NNDVIITATSSKTPIVE-ERSLMPG-KLFIDLGNPP  113 (144)
T ss_dssp             HH------TCSEEEECSCCSSCSBC-GGGCCTT-CEEEECCSSC
T ss_pred             hc------CCCEEEEeCCCCCcEee-HHHcCCC-CEEEEccCCc
Confidence            32      58999999987633222 2677886 8888887654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.04  E-value=1.2e-05  Score=72.44  Aligned_cols=100  Identities=14%  Similarity=0.221  Sum_probs=74.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcE--EeCCCCCCcccHHHHHHhh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTD--FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~--v~~~~~~~~~~~~~~i~~~  257 (375)
                      ..+++++|++||.+|+|+.++.++.+|+..|+ +|++++.+++..+.+++.    |.+.  ++..+.   .+       +
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa---~~-------l  184 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE---TV-------I  184 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG---GG-------G
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch---hh-------C
Confidence            35789999999999999888888888988898 999999999998887653    4422  222211   11       2


Q ss_pred             cCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccC
Q 017201          258 THGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      . ...||+|+.+...+   ..++.+.+.|+|+ |+++.....
T Consensus       185 ~-d~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~~  224 (298)
T 3fpf_A          185 D-GLEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTYT  224 (298)
T ss_dssp             G-GCCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEECC
T ss_pred             C-CCCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcCc
Confidence            2 34799998765533   4788999999998 999887644

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.97  E-value=7.6e-05  Score=57.20  Aligned_cols=94  Identities=12%  Similarity=0.061  Sum_probs=64.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .+.+|+|+|+|.+|...++.+...| . +|+++++++++.+.+...+...+. +..+   .   +.+.+...  ++|+||
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~---~~~~~~~~--~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD---E---AGLAKALG--GFDAVI   74 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC---H---HHHHHHTT--TCSEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC---H---HHHHHHHc--CCCEEE
Confidence            3568999999999999999999899 6 899999999998887766765433 3322   1   22333332  699999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEE
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ++++..........+...+ ..++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           75 SAAPFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEECC
T ss_pred             ECCCchhhHHHHHHHHHhC-CCEEEe
Confidence            9998664433444444544 454443

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.96  E-value=7.2e-06  Score=73.17  Aligned_cols=94  Identities=18%  Similarity=0.170  Sum_probs=68.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCc-EEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .++.+||.+|+|. |..+..+++.. |. +|++++.+++..+.+++.+.. .++..+.   .++     ...+ ..||+|
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~-~~fD~v  152 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSD-TSMDAI  152 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCT-TCEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhC-----CCCC-CceeEE
Confidence            6889999999987 99999999987 66 999999999999888776532 2222211   111     1122 379999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +.... ...+..+.+.|+++ |+++....
T Consensus       153 ~~~~~-~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          153 IRIYA-PCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             EEESC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEeCC-hhhHHHHHHhcCCC-cEEEEEEc
Confidence            96444 45789999999997 99887753

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.91  E-value=4.7e-05  Score=71.67  Aligned_cols=93  Identities=24%  Similarity=0.342  Sum_probs=74.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...         .++.+.+    .  +.|+|+
T Consensus       217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v---------~~Leeal----~--~ADIVi  280 (435)
T 3gvp_A          217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL---------VKLNEVI----R--QVDIVI  280 (435)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---------CCHHHHT----T--TCSEEE
T ss_pred             eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe---------ccHHHHH----h--cCCEEE
Confidence            4689999999999999999999999999 8999999988776666677532         1232222    1  589999


Q ss_pred             EccCChhhHH-HHHHhcccCCeEEEEEccCC
Q 017201          268 ECTGVPSLLS-EALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       268 d~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .|.++...+. ..+..++++ +.++.+|...
T Consensus       281 ~atgt~~lI~~e~l~~MK~g-ailINvgrg~  310 (435)
T 3gvp_A          281 TCTGNKNVVTREHLDRMKNS-CIVCNMGHSN  310 (435)
T ss_dssp             ECSSCSCSBCHHHHHHSCTT-EEEEECSSTT
T ss_pred             ECCCCcccCCHHHHHhcCCC-cEEEEecCCC
Confidence            9988765555 888999997 9999887654

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.80  E-value=0.00023  Score=62.77  Aligned_cols=102  Identities=17%  Similarity=0.131  Sum_probs=73.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhc----CCc---EEeCCCCCCcccHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISEL  253 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~  253 (375)
                      +.....++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++.    |..   .++.. +     +.  
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d-----~~--  155 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-D-----IY--  155 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-C-----GG--
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-c-----hh--
Confidence            44667889999999999986 888899999853 34999999999888877642    432   22222 1     11  


Q ss_pred             HHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEcc
Q 017201          254 VKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                        +......+|+|+.....+ ..++.+.+.|+++ |+++.+..
T Consensus       156 --~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  195 (255)
T 3mb5_A          156 --EGIEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYTP  195 (255)
T ss_dssp             --GCCCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             --hccCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEEC
Confidence              112333699999877654 3789999999997 99987753

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.79  E-value=0.00018  Score=60.05  Aligned_cols=96  Identities=22%  Similarity=0.275  Sum_probs=67.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .+++|+|+|+|.+|...++.++.. |+ +|+++++++++.+.+++.|...+. |..+   .+   .+.+.++-.++|+||
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~---~~---~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD---PD---FWERILDTGHVKLVL  110 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC---HH---HHHTBCSCCCCCEEE
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC---HH---HHHhccCCCCCCEEE
Confidence            367899999999999999999988 98 899999999999888888876544 3322   22   233331334799999


Q ss_pred             EccCChhhHHHHHHhc---ccCCeEEEEE
Q 017201          268 ECTGVPSLLSEALETT---KVGKGKVIVI  293 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l---~~~~G~iv~~  293 (375)
                      .++++......+...+   .+. .+++..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~-~~ii~~  138 (183)
T 3c85_A          111 LAMPHHQGNQTALEQLQRRNYK-GQIAAI  138 (183)
T ss_dssp             ECCSSHHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred             EeCCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            9998775433333333   443 465544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.77  E-value=0.0001  Score=66.78  Aligned_cols=95  Identities=23%  Similarity=0.269  Sum_probs=72.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      --.|++|+|+|+|.+|..+++.++.+|+ +|++.++++++.+.++++|+..+ +.     .++.+.+      .+.|+|+
T Consensus       152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~-----~~l~~~l------~~aDvVi  218 (293)
T 3d4o_A          152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HI-----SKAAQEL------RDVDVCI  218 (293)
T ss_dssp             CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EG-----GGHHHHT------TTCSEEE
T ss_pred             CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Ch-----hhHHHHh------cCCCEEE
Confidence            3578999999999999999999999999 99999999888777777887532 21     2232222      2689999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .++...-.-...+..++++ +.++.++..
T Consensus       219 ~~~p~~~i~~~~l~~mk~~-~~lin~ar~  246 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSH-TFVIDLASK  246 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTT-CEEEECSST
T ss_pred             ECCChHHhCHHHHHhcCCC-CEEEEecCC
Confidence            9997542224577888997 999988753

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.71  E-value=0.00018  Score=67.85  Aligned_cols=94  Identities=19%  Similarity=0.211  Sum_probs=73.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ..-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... .        ++.+.+.      ..|+|
T Consensus       243 ~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v--------~LeElL~------~ADIV  306 (464)
T 3n58_A          243 VMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V--------TLDDAAS------TADIV  306 (464)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C--------CHHHHGG------GCSEE
T ss_pred             CcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c--------cHHHHHh------hCCEE
Confidence            35689999999999999999999999999 9999999887766666667642 1        2322221      58999


Q ss_pred             EEccCChhhH-HHHHHhcccCCeEEEEEccCC
Q 017201          267 FECTGVPSLL-SEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       267 id~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +.+.++...+ ...+..++++ +.++.+|...
T Consensus       307 v~atgt~~lI~~e~l~~MK~G-AILINvGRgd  337 (464)
T 3n58_A          307 VTTTGNKDVITIDHMRKMKDM-CIVGNIGHFD  337 (464)
T ss_dssp             EECCSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred             EECCCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence            9999876444 5788999997 9999887654

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.71  E-value=3.7e-05  Score=71.02  Aligned_cols=105  Identities=20%  Similarity=0.159  Sum_probs=69.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhc----C-------------CcEEeCCC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAF----G-------------MTDFINPD  243 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~l----g-------------~~~v~~~~  243 (375)
                      +.....+.+|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++.    +             ...++..+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            34556789999999999986 8888889988763 4999999999888776542    1             11122211


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEcc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      -   .+.   ...+..+ .||+|+-....+ ..+..+.++|+++ |.++.+..
T Consensus       176 ~---~~~---~~~~~~~-~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          176 I---SGA---TEDIKSL-TFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             T---TCC---C--------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             h---HHc---ccccCCC-CeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            1   111   0011222 599988665544 3588999999997 99987653

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.71  E-value=0.00025  Score=63.36  Aligned_cols=104  Identities=19%  Similarity=0.215  Sum_probs=73.1

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhc-----C--Cc--EEeCCCCCCcccHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF-----G--MT--DFINPDDEPNKSIS  251 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l-----g--~~--~v~~~~~~~~~~~~  251 (375)
                      +.....++++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++.     |  .+  .++.. +     +.
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~-d-----~~  163 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS-D-----LA  163 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS-C-----GG
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC-c-----hH
Confidence            4456788999999999998 6888889998763 33999999999888777542     3  21  22222 1     11


Q ss_pred             HHHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEccC
Q 017201          252 ELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       252 ~~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.   ......+|+|+.....+ ..+..+.+.|+++ |.++.+...
T Consensus       164 ~~---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  205 (280)
T 1i9g_A          164 DS---ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVAT  205 (280)
T ss_dssp             GC---CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEESS
T ss_pred             hc---CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeCC
Confidence            10   11233699998776554 5789999999997 998887543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.65  E-value=0.00017  Score=65.42  Aligned_cols=95  Identities=19%  Similarity=0.259  Sum_probs=71.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      --.|++|+|+|+|.+|..+++.++.+|+ +|++.++++++.+.+.++|... ++.     .++.+    +..  +.|+|+
T Consensus       154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~-----~~l~~----~l~--~aDvVi  220 (300)
T 2rir_A          154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHT-----DELKE----HVK--DIDICI  220 (300)
T ss_dssp             CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEG-----GGHHH----HST--TCSEEE
T ss_pred             CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Ech-----hhHHH----Hhh--CCCEEE
Confidence            4578999999999999999999999999 9999999998877776777642 221     22322    222  689999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .+++..-.-...+..++++ +.++.++..
T Consensus       221 ~~~p~~~i~~~~~~~mk~g-~~lin~a~g  248 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPK-TLILDLASR  248 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTT-CEEEECSST
T ss_pred             ECCChhhhCHHHHHhCCCC-CEEEEEeCC
Confidence            9998642224567888997 999998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.64  E-value=0.00012  Score=70.08  Aligned_cols=91  Identities=21%  Similarity=0.302  Sum_probs=72.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|++|+|+|+|++|.+.++.++..|+ +|+++++++.+...+...+++ +.+..     +       .  -..+|++++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le-----e-------~--~~~aDvVi~  326 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE-----D-------V--VSEADIFVT  326 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG-----G-------T--TTTCSEEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH-----H-------H--HHhcCEEEe
Confidence            579999999999999999999999999 999999999888777777754 22111     1       1  126899999


Q ss_pred             ccCChhhHH-HHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPSLLS-EALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~~~~-~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.|....+. ..+..++++ +.++..|..
T Consensus       327 atG~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          327 TTGNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             CSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             CCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            998765554 488899997 988888865

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.63  E-value=0.0007  Score=53.86  Aligned_cols=95  Identities=11%  Similarity=0.073  Sum_probs=67.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.++|+|+|.|.+|...++.++..|. +|+++++++++.+.+++.|...+. |..+   .+.   +.+. +-.++|.+|-
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~~---~~~---l~~a-~i~~ad~vi~   77 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAAN---EEI---MQLA-HLECAKWLIL   77 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTTS---HHH---HHHT-TGGGCSEEEE
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCCC---HHH---HHhc-CcccCCEEEE
Confidence            34689999999999999999999999 999999999999999888886554 3322   232   2222 2237999999


Q ss_pred             ccCChhhH---HHHHHhcccCCeEEEEE
Q 017201          269 CTGVPSLL---SEALETTKVGKGKVIVI  293 (375)
Q Consensus       269 ~~g~~~~~---~~~~~~l~~~~G~iv~~  293 (375)
                      +++.+...   -...+.+.+. .+++.-
T Consensus        78 ~~~~~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           78 TIPNGYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             ECCChHHHHHHHHHHHHHCCC-CeEEEE
Confidence            99876422   2344455565 565543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.55  E-value=0.00036  Score=65.81  Aligned_cols=111  Identities=19%  Similarity=0.271  Sum_probs=80.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .-.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...+         ++.+.+.      ..|+|+
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~---------sL~eal~------~ADVVi  271 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL---------LVEDVVE------EAHIFV  271 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC---------CHHHHTT------TCSEEE
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec---------CHHHHHh------hCCEEE
Confidence            4579999999999999999999999999 99999999888777777776421         2332221      589999


Q ss_pred             EccCChhhHH-HHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEE
Q 017201          268 ECTGVPSLLS-EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       268 d~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (375)
                      .+.++...+. ..+..++++ ..++.++..   ...++...+..+..++.++
T Consensus       272 lt~gt~~iI~~e~l~~MK~g-AIVINvgRg---~vEID~~~L~~~~~~~~~i  319 (436)
T 3h9u_A          272 TTTGNDDIITSEHFPRMRDD-AIVCNIGHF---DTEIQVAWLKANAKERVEV  319 (436)
T ss_dssp             ECSSCSCSBCTTTGGGCCTT-EEEEECSSS---GGGBCHHHHHHHCSEEEEE
T ss_pred             ECCCCcCccCHHHHhhcCCC-cEEEEeCCC---CCccCHHHHHhhcCceEee
Confidence            9887654444 677888997 888888743   3345555555444444443

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.46  E-value=0.0012  Score=56.21  Aligned_cols=102  Identities=16%  Similarity=0.180  Sum_probs=72.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i  254 (375)
                      +.....+.++++||-+|+|. |..++.+|+. +. +|++++.+++..+.+++    +|..   .++..+-   .+   . 
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~---~-  116 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PA---A-  116 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TG---G-
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hh---h-
Confidence            34566789999999999986 8888899988 76 99999999998887653    3443   2332221   11   1 


Q ss_pred             HhhcCCCCccEEEEccCChh-hHHHHHHhcccCCeEEEEEccC
Q 017201          255 KGITHGMGVDYCFECTGVPS-LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~-~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                        +.....+|+|+...+... .++.+.+.|+++ |+++.....
T Consensus       117 --~~~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~  156 (204)
T 3njr_A          117 --LADLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAVT  156 (204)
T ss_dssp             --GTTSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEECS
T ss_pred             --cccCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEecC
Confidence              111236999987654332 688999999998 998876544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.44  E-value=0.00099  Score=52.87  Aligned_cols=76  Identities=24%  Similarity=0.308  Sum_probs=57.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      ..+|+|+|+|.+|...++.+...|+ +|+++++++++.+.+++.+...+. |..+   .+.   +.+. +-.++|+||.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~~---~~~---l~~~-~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPTD---ESF---YRSL-DLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTTC---HHH---HHHS-CCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCCC---HHH---HHhC-CcccCCEEEEe
Confidence            4689999999999999999999999 999999999999888887765443 3322   222   3333 22379999999


Q ss_pred             cCChh
Q 017201          270 TGVPS  274 (375)
Q Consensus       270 ~g~~~  274 (375)
                      +++..
T Consensus        78 ~~~~~   82 (141)
T 3llv_A           78 GSDDE   82 (141)
T ss_dssp             CSCHH
T ss_pred             cCCHH
Confidence            99763

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.44  E-value=0.00064  Score=53.87  Aligned_cols=76  Identities=21%  Similarity=0.309  Sum_probs=55.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      ++++|+|+|+|.+|...++.+...|+ +|+++++++++.+.+++.+...+. +..     + .+.+.+. .-.++|+||.
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~d~~-----~-~~~l~~~-~~~~~d~vi~   76 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT-----E-ENELLSL-GIRNFEYVIV   76 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEECCTT-----C-HHHHHTT-TGGGCSEEEE
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEEeCCC-----C-HHHHHhc-CCCCCCEEEE
Confidence            35689999999999999999999998 899999998888777766664333 222     2 1233332 1236999999


Q ss_pred             ccCCh
Q 017201          269 CTGVP  273 (375)
Q Consensus       269 ~~g~~  273 (375)
                      +++.+
T Consensus        77 ~~~~~   81 (144)
T 2hmt_A           77 AIGAN   81 (144)
T ss_dssp             CCCSC
T ss_pred             CCCCc
Confidence            99874

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.41  E-value=0.00043  Score=58.17  Aligned_cols=101  Identities=21%  Similarity=0.213  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC---------CeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHh
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGA---------AKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKG  256 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~---------~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~  256 (375)
                      .++++++||.+|+|+ |..+..+++..|.         .+|++++.++...  .  -.+. ++ ..+- ...+....+.+
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~--~--~~~~-~~~~~d~-~~~~~~~~~~~   91 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP--L--EGAT-FLCPADV-TDPRTSQRILE   91 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC--C--TTCE-EECSCCT-TSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc--C--CCCe-EEEeccC-CCHHHHHHHHH
Confidence            368899999999987 9999999999873         4899999887531  0  1122 22 2111 11233444444


Q ss_pred             hcCCCCccEEEE-----ccCCh------------hhHHHHHHhcccCCeEEEEEcc
Q 017201          257 ITHGMGVDYCFE-----CTGVP------------SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       257 ~~~~~g~d~vid-----~~g~~------------~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ..++..||+|+.     +++..            ..+..+.+.|+++ |+++..-.
T Consensus        92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444447999994     33321            3577889999997 99887643

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.36  E-value=0.00096  Score=58.30  Aligned_cols=167  Identities=13%  Similarity=0.053  Sum_probs=95.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .|+++||+|+ +++|.+.++.....|+ +|+++++++++.+....-.+.. ..|-.+   ++-.+++.+.. + ++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g-~iDiLV   83 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD---SQRLQRLFEAL-P-RLDVLV   83 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC---HHHHHHHHHHC-S-CCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC---HHHHHHHHHhc-C-CCCEEE
Confidence            6999999988 9999998888889999 9999999888765433222211 223333   33333333322 2 699999


Q ss_pred             EccCChh-----------------------hHHHHHHhcccCCeEEEEEccCCC-cccc-ch----------------HH
Q 017201          268 ECTGVPS-----------------------LLSEALETTKVGKGKVIVIGVGVD-AMVP-LN----------------VI  306 (375)
Q Consensus       268 d~~g~~~-----------------------~~~~~~~~l~~~~G~iv~~g~~~~-~~~~-~~----------------~~  306 (375)
                      ++.|-..                       ..+.++..++..+|+|+.++.... .... ..                ..
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~  163 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLAC  163 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9987321                       223455555443499999975432 1110 00                01


Q ss_pred             HhhcCCceEEEEeeccccCCC-----CHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC
Q 017201          307 ALACGGRTLKGTTFGGIKTKS-----DLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  367 (375)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  367 (375)
                      ++-.+++++.....+...++-     .-++..+.+.+. ++...    .-.-+|+.++.-.+.+.+
T Consensus       164 Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~-~PlgR----~g~peeiA~~v~fLaSd~  224 (242)
T 4b79_A          164 EYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQR-TPLAR----WGEAPEVASAAAFLCGPG  224 (242)
T ss_dssp             HHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHT-CTTCS----CBCHHHHHHHHHHHTSGG
T ss_pred             HhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhc-CCCCC----CcCHHHHHHHHHHHhCch
Confidence            133468888887766543220     111222222221 22211    123467888888876543

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.35  E-value=0.0018  Score=54.87  Aligned_cols=104  Identities=11%  Similarity=0.144  Sum_probs=73.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~  255 (375)
                      +....+++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+  .++..+-   .+   .  
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~---~--  102 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PE---G--  102 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TT---T--
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hh---h--
Confidence            34566889999999999985 8889999998744499999999998887764    3432  2222211   01   0  


Q ss_pred             hhcCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEccC
Q 017201          256 GITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                       ......+|+|+.....   ...++.+.+.|+++ |+++.....
T Consensus       103 -~~~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  144 (204)
T 3e05_A          103 -LDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAVT  144 (204)
T ss_dssp             -CTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEECB
T ss_pred             -hhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEecc
Confidence             1111369999987652   34788999999998 999887544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.28  E-value=0.0018  Score=56.82  Aligned_cols=78  Identities=15%  Similarity=0.029  Sum_probs=52.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE---eCCCCCCcccHHHHHHhhcCC-CCccEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF---INPDDEPNKSISELVKGITHG-MGVDYC  266 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~-~g~d~v  266 (375)
                      ++|||+|+ +++|.+.++.....|+ +|+.+++++++.+.+.+.+....   .|-.+  .++..+.+.+.... .++|++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD--PLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            68999988 9999998888888999 99999999888776655443221   23222  22333333222211 269999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      +++.|.
T Consensus        80 VNNAG~   85 (247)
T 3ged_A           80 VNNACR   85 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.26  E-value=0.0014  Score=58.49  Aligned_cols=105  Identities=16%  Similarity=0.205  Sum_probs=71.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE---eCCCCCCcccHHHHHHhhcCC-CC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF---INPDDEPNKSISELVKGITHG-MG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~-~g  262 (375)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ +++|....   .|-.+  .++..+.+.+.... .+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN--LAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC--HHHHHHHHHHHHHHcCC
Confidence            46899999988 9999998888889999 999999999887654 45654322   23333  23333333332211 26


Q ss_pred             ccEEEEccCChh-------------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          263 VDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       263 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +|+++++.|...                         ..+.++..++++ |+++.++...
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~~  162 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTA  162 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeehh
Confidence            999999997521                         345567778886 9999987543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.22  E-value=0.0012  Score=54.38  Aligned_cols=104  Identities=14%  Similarity=0.196  Sum_probs=72.0

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc-E-EeCCCCCCcccHHHHHHh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-D-FINPDDEPNKSISELVKG  256 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~-~-v~~~~~~~~~~~~~~i~~  256 (375)
                      .....++++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++    .+.. . .+..+.      .+.+..
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~------~~~~~~   90 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGA------PRAFDD   90 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCT------TGGGGG
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecch------Hhhhhc
Confidence            4556788999999999985 8899999998744499999999988887763    3443 2 222111      111111


Q ss_pred             hcCCCCccEEEEccCCh--hhHHHHHHhcccCCeEEEEEccC
Q 017201          257 ITHGMGVDYCFECTGVP--SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~--~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                        ....||+|+......  ..++.+.+.|+++ |+++.....
T Consensus        91 --~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  129 (178)
T 3hm2_A           91 --VPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAVT  129 (178)
T ss_dssp             --CCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEECS
T ss_pred             --cCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEeec
Confidence              113799999766433  3789999999998 999876543

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.19  E-value=0.00036  Score=60.75  Aligned_cols=100  Identities=23%  Similarity=0.308  Sum_probs=70.7

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~  255 (375)
                      +.+...++++++||.+|+| .|..+..+++..+. +|++++.+++..+.+++    .+...  ++..      +.   ..
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~------d~---~~  151 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG------DG---SK  151 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CG---GG
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC------Cc---cc
Confidence            3455678999999999998 68999999998874 99999999988877754    34322  2211      11   11


Q ss_pred             hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .+..+..||+|+.+.........+.+.|+++ |+++..
T Consensus       152 ~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~  188 (235)
T 1jg1_A          152 GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  188 (235)
T ss_dssp             CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             CCCCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEE
Confidence            1222335999998776554557888999997 887765

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.19  E-value=0.0011  Score=58.15  Aligned_cols=102  Identities=15%  Similarity=0.055  Sum_probs=73.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhc-----CCcE--EeCCCCCCcccHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF-----GMTD--FINPDDEPNKSISEL  253 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l-----g~~~--v~~~~~~~~~~~~~~  253 (375)
                      +.....++++++||.+|+|. |..+..+++..| ..+|++++.+++..+.+++.     |.+.  ++.. +     +   
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~-d-----~---  157 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG-K-----L---  157 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES-C-----G---
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC-c-----h---
Confidence            34566789999999999985 888999999864 33999999999988877653     5322  2221 1     1   


Q ss_pred             HHhh-cCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEcc
Q 017201          254 VKGI-THGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       254 i~~~-~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                       .+. .....+|+|+...... ..+..+.+.|+++ |+++.+..
T Consensus       158 -~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          158 -EEAELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             -GGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             -hhcCCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence             111 1223699998776655 5789999999997 99888753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.13  E-value=0.0031  Score=54.60  Aligned_cols=99  Identities=14%  Similarity=0.148  Sum_probs=65.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .|.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+...++ ..+. .+-   .   +.+.+...  ++|+||
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~-~Dl---~---~~~~~~~~--~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVV-ANL---E---EDFSHAFA--SIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEE-CCT---T---SCCGGGGT--TCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEE-ccc---H---HHHHHHHc--CCCEEE
Confidence            5789999998 9999998888888898 99999999998887776666 4332 111   1   22333332  699999


Q ss_pred             EccCChh-------------hHHHHHHhccc-CCeEEEEEccCCC
Q 017201          268 ECTGVPS-------------LLSEALETTKV-GKGKVIVIGVGVD  298 (375)
Q Consensus       268 d~~g~~~-------------~~~~~~~~l~~-~~G~iv~~g~~~~  298 (375)
                      ++.|...             .....++.+.. +.++++.++....
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            9998431             11122333322 1268998876543

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.12  E-value=0.00076  Score=58.82  Aligned_cols=103  Identities=17%  Similarity=0.147  Sum_probs=70.7

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCcE---EeCCCCCCcccHHHHHH
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTD---FINPDDEPNKSISELVK  255 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~~i~  255 (375)
                      ......++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|...   ++.      .+..+.+.
T Consensus        54 ~l~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~------~d~~~~~~  126 (239)
T 2hnk_A           54 ILTKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL------GSALETLQ  126 (239)
T ss_dssp             HHHHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHH
T ss_pred             HHHHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE------CCHHHHHH
Confidence            34456788999999998 5888999999874 2399999999988877754    34421   222      22333333


Q ss_pred             hhcC-------------C-CCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITH-------------G-MGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~-------------~-~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ++..             + ..||+|+......   ..+..+.+.|+++ |.++...
T Consensus       127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             HHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            2211             1 3799998776544   4578899999997 9888653

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.12  E-value=0.0013  Score=56.18  Aligned_cols=101  Identities=22%  Similarity=0.295  Sum_probs=70.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG--AAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISEL  253 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G--~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~  253 (375)
                      +.+...+.++++||.+|+| .|..+..+++..|  . +|++++.+++..+.+++    .+...  ++.. +     ... 
T Consensus        69 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~-d-----~~~-  139 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDG-LVVSIERIPELAEKAERTLRKLGYDNVIVIVG-D-----GTL-  139 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEES-C-----GGG-
T ss_pred             HHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC-C-----ccc-
Confidence            3456678899999999998 4889999999886  5 99999999988877764    23221  2211 1     110 


Q ss_pred             HHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEc
Q 017201          254 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                        .......||+|+.+.........+.++|+++ |+++..-
T Consensus       140 --~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~  177 (215)
T 2yxe_A          140 --GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPV  177 (215)
T ss_dssp             --CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             --CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEE
Confidence              1111236999998876554557888999997 9887763

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.10  E-value=0.00045  Score=59.99  Aligned_cols=103  Identities=15%  Similarity=0.210  Sum_probs=69.8

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~  256 (375)
                      ......++++||-+|+| .|..+..+++..+..+|++++.+++..+.+++    .|..   .++..+.   .+.   +..
T Consensus        48 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~---~~~  120 (233)
T 2gpy_A           48 HLLKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA---LQL---GEK  120 (233)
T ss_dssp             HHHHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG---GGS---HHH
T ss_pred             HHHhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH---HHH---HHh
Confidence            34456788999999998 68888999998843399999999998887764    3432   2332221   121   122


Q ss_pred             hcCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          257 ITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ......||+|+.....   ...+..+.+.|+++ |.++...
T Consensus       121 ~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          121 LELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             HTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             cccCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            2112379999876553   34678899999997 9888753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.02  E-value=0.0026  Score=56.02  Aligned_cols=105  Identities=18%  Similarity=0.196  Sum_probs=66.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      -.|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +++... .  .|-.+  .++..+.+.+... -.+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIAD--LNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHHhCC
Confidence            35789999988 9999988888888899 9999999988876553 344322 1  23332  1222222222211 126


Q ss_pred             ccEEEEccCCh----------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          263 VDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       263 ~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +|++|++.|..          +               ..+.+...++++ |+++.++...
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  141 (255)
T 4eso_A           83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSVA  141 (255)
T ss_dssp             EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECChh
Confidence            99999998732          1               123344555665 8999987543

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.00  E-value=0.00088  Score=58.86  Aligned_cols=103  Identities=14%  Similarity=0.181  Sum_probs=70.9

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~  256 (375)
                      .....++.+||-+|+|. |..++.+|+.++ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+..
T Consensus        58 l~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~------~d~~~~l~~  130 (248)
T 3tfw_A           58 LVRLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE------GPALQSLES  130 (248)
T ss_dssp             HHHHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHT
T ss_pred             HHhhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHh
Confidence            33567889999999974 888889999874 3499999999998877754    3443   1221      234444444


Q ss_pred             hcCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEcc
Q 017201          257 ITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ......||+|+-....   ...++.+.++|+++ |.++.-..
T Consensus       131 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          131 LGECPAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             cCCCCCeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            4333479999843322   24688889999998 98876543

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.00  E-value=0.002  Score=54.75  Aligned_cols=100  Identities=12%  Similarity=0.113  Sum_probs=69.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~  255 (375)
                      +.+...++++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++    .+..  .++..+      ..+   
T Consensus        69 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~---  136 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD------GWQ---  136 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------GGG---
T ss_pred             HHHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECC------ccc---
Confidence            3456688999999999998 48888888888 65 99999999988877754    3432  222211      111   


Q ss_pred             hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .......||+|+...........+.+.|+++ |+++..-
T Consensus       137 ~~~~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          137 GWQARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             CCGGGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             CCccCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence            1112237999998766554456788999997 8877653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.98  E-value=0.0056  Score=53.15  Aligned_cols=79  Identities=11%  Similarity=0.193  Sum_probs=51.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCC--cE-EeCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGM--TD-FINPDDEPNKSISELVKGITH-GMGVD  264 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~--~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d  264 (375)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. .++.  .. ..|-.+  .+++.+.+.+... ..++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH--HEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS--HHHHHHHHHHHHHHHCSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHHhcCCCc
Confidence            578999998 9999988877778899 8999999988776543 2322  11 123332  1233332322211 12699


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      ++|++.|.
T Consensus        80 ~lvnnAg~   87 (235)
T 3l6e_A           80 LVLHCAGT   87 (235)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCCC
Confidence            99999874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.97  E-value=0.0083  Score=51.22  Aligned_cols=92  Identities=20%  Similarity=0.282  Sum_probs=63.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+. |..+   .+. +.+      .++|+||++.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d---~~~-~~~------~~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV---LTE-ADL------DSVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG---CCH-HHH------TTCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc---ccH-hhc------ccCCEEEECC
Confidence            6999998 9999998888888898 999999999887765544554432 3322   222 211      2699999999


Q ss_pred             CCh----------hhHHHHHHhcccCCeEEEEEcc
Q 017201          271 GVP----------SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       271 g~~----------~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      |..          ......+..+...+++++.++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            762          1234556666554378888854

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.96  E-value=0.00082  Score=61.26  Aligned_cols=100  Identities=11%  Similarity=0.175  Sum_probs=71.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc---EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~i  254 (375)
                      +.+..++.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    +..   .++.. +     +    
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d-----~----  149 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-G-----W----  149 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-C-----G----
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-C-----h----
Confidence            44566788999999999976 8888899988888 999999999988877643    321   12211 1     1    


Q ss_pred             HhhcCCCCccEEEEc-----cCC---hhhHHHHHHhcccCCeEEEEEccC
Q 017201          255 KGITHGMGVDYCFEC-----TGV---PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       255 ~~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .++ + ..||+|+..     .+.   ...+..+.++|+|+ |+++.....
T Consensus       150 ~~~-~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          150 EDF-A-EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             GGC-C-CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             HHC-C-CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            112 2 379999876     322   24678889999998 998876543

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.95  E-value=0.001  Score=56.37  Aligned_cols=133  Identities=17%  Similarity=0.249  Sum_probs=79.2

Q ss_pred             ceeeeEE-eecccEEEcCCCCCcccccccccchhhhhhhhhhhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEE
Q 017201          144 TWSEYMV-IDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA--KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG  220 (375)
Q Consensus       144 ~~a~~~~-v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~--~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~  220 (375)
                      .|.+|.. .+....+.+++++++..+.. +   . ... +....  .++++++||-+|+|. |..+..+++. +..+|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~---~-~~~-~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-Q---T-TQL-AMLGIERAMVKPLTVADVGTGS-GILAIAAHKL-GAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-H---H-HHH-HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHHT-TCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-c---c-HHH-HHHHHHHhccCCCEEEEECCCC-CHHHHHHHHC-CCCEEEE
Confidence            5666665 56677888888776555421 1   1 111 11112  267899999999975 7777777764 5559999


Q ss_pred             EcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEE
Q 017201          221 IDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVI  291 (375)
Q Consensus       221 ~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv  291 (375)
                      ++.+++..+.+++    .+..  .++..+-   .       +... ..+|+|+......   ..+..+.++|+++ |+++
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~-------~~~~-~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~  156 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSL---L-------ADVD-GKFDLIVANILAEILLDLIPQLDSHLNED-GQVI  156 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESST---T-------TTCC-SCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEeccc---c-------ccCC-CCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEE
Confidence            9999988877754    2432  2222211   1       1122 3799998765433   2355667788997 9888


Q ss_pred             EEccC
Q 017201          292 VIGVG  296 (375)
Q Consensus       292 ~~g~~  296 (375)
                      .....
T Consensus       157 ~~~~~  161 (205)
T 3grz_A          157 FSGID  161 (205)
T ss_dssp             EEEEE
T ss_pred             EEecC
Confidence            76433

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.94  E-value=0.0079  Score=52.95  Aligned_cols=80  Identities=20%  Similarity=0.277  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEEe---CCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFI---NPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v~---~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+..    ++.|.+...   |-.+  .++..+.+.+... .
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD--ELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC--HHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHC
Confidence            5889999988 9999998888888999 999999998876543    344543322   2222  2333333333322 2


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|+++++.|.
T Consensus        85 G~iDiLVNNAG~   96 (255)
T 4g81_D           85 IHVDILINNAGI   96 (255)
T ss_dssp             CCCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            269999999974

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.92  E-value=0.01  Score=46.46  Aligned_cols=76  Identities=18%  Similarity=0.182  Sum_probs=53.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++ ++...+. +..+   .+   .+.+. .-.++|+||.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~---~~---~l~~~-~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCTK---IK---TLEDA-GIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTTS---HH---HHHHT-TTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCCC---HH---HHHHc-CcccCCEEEE
Confidence            4579999999999998888888898 89999999888776653 5664332 2222   11   22222 1226999999


Q ss_pred             ccCChh
Q 017201          269 CTGVPS  274 (375)
Q Consensus       269 ~~g~~~  274 (375)
                      +++...
T Consensus        76 ~~~~~~   81 (140)
T 1lss_A           76 VTGKEE   81 (140)
T ss_dssp             CCSCHH
T ss_pred             eeCCch
Confidence            998763

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.89  E-value=0.011  Score=54.92  Aligned_cols=93  Identities=13%  Similarity=0.052  Sum_probs=65.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|+|+|+|.+|..+++.+.. .. .|.+++++.++.+.+++......+|..+   .+   .+.++..  +.|+||++++
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d---~~---~l~~~~~--~~DvVi~~~p   86 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN---FD---KLVEVMK--EFELVIGALP   86 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC---HH---HHHHHHT--TCSEEEECCC
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC---HH---HHHHHHh--CCCEEEEecC
Confidence            379999999999988777654 34 8999999999988887655444455444   22   2333332  5899999998


Q ss_pred             ChhhHHHHHHhcccCCeEEEEEcc
Q 017201          272 VPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       272 ~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ..-+...+-.|+..+ -.++.+..
T Consensus        87 ~~~~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           87 GFLGFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             GGGHHHHHHHHHHHT-CEEEECCC
T ss_pred             CcccchHHHHHHhcC-cceEeeec
Confidence            664556677777776 77777653

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.88  E-value=0.0012  Score=59.72  Aligned_cols=101  Identities=14%  Similarity=0.180  Sum_probs=72.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i  254 (375)
                      +....+++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++.. +     +    
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d-----~----  131 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-G-----W----  131 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-C-----G----
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-C-----H----
Confidence            45667889999999999985 8889999999887 99999999998887764    3332   12221 1     1    


Q ss_pred             HhhcCCCCccEEEEccCC---------------hhhHHHHHHhcccCCeEEEEEccCC
Q 017201          255 KGITHGMGVDYCFECTGV---------------PSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .++  ...||+|+....-               ...+..+.++|+|+ |+++......
T Consensus       132 ~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          132 EEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             GGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             HHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence            122  2379999864321               24678899999998 9998876443

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.88  E-value=0.0072  Score=51.98  Aligned_cols=100  Identities=13%  Similarity=0.173  Sum_probs=67.7

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhh----cCCc--E--EeCCCCCCcccHHHH
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMT--D--FINPDDEPNKSISEL  253 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lg~~--~--v~~~~~~~~~~~~~~  253 (375)
                      ...+.+++.+||-+|+| .|..++.+|+.+  +. +|++++.+++..+.+++    .|..  .  ++.      .+..+.
T Consensus        50 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~------gda~~~  121 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPA-AGLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLL------SRPLDV  121 (221)
T ss_dssp             HHSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC------SCHHHH
T ss_pred             HhhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE------cCHHHH
Confidence            33445566699999997 488899999987  45 99999999988877653    3433  1  222      233333


Q ss_pred             HHhhcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEE
Q 017201          254 VKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~  293 (375)
                      +..+.. ..||+||-.....   ..++.+.++|+++ |.++.-
T Consensus       122 l~~~~~-~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d  162 (221)
T 3dr5_A          122 MSRLAN-DSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLA  162 (221)
T ss_dssp             GGGSCT-TCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEET
T ss_pred             HHHhcC-CCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEe
Confidence            333323 3799997654322   3578899999997 888764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.87  E-value=0.011  Score=50.14  Aligned_cols=92  Identities=14%  Similarity=0.257  Sum_probs=62.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+...+. |..+   .+. +.+      .++|+||++.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d---~~~-~~~------~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD---LTL-SDL------SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG---CCH-HHH------TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC---hhh-hhh------cCCCEEEECC
Confidence            6999998 9999998888888898 9999999988876554 3443322 3222   222 222      2699999999


Q ss_pred             CCh--------hhHHHHHHhcccC-CeEEEEEccC
Q 017201          271 GVP--------SLLSEALETTKVG-KGKVIVIGVG  296 (375)
Q Consensus       271 g~~--------~~~~~~~~~l~~~-~G~iv~~g~~  296 (375)
                      |..        ......+..++.. .++++.++..
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            753        1234455555543 2688888654

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.85  E-value=0.0042  Score=56.46  Aligned_cols=92  Identities=14%  Similarity=0.179  Sum_probs=62.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCChhh--HHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGARM--HGAAKIIGIDKNPWK--KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~--~G~~~V~~~~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -+|.|+|+|.+|...+..+..  -+..-+.++++++++  .++++.+|.....       .++ +.+.+.+++.++|+||
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~-------~~~-e~ll~~~~~~~iDvV~   76 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-------AGV-EGLIKLPEFADIDFVF   76 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-------SHH-HHHHHSGGGGGEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc-------CCH-HHHHhccCCCCCcEEE
Confidence            479999999999987777733  466334455666666  5666778864221       122 3343333345799999


Q ss_pred             EccCChhhHHHHHHhccc--CCeEEEE
Q 017201          268 ECTGVPSLLSEALETTKV--GKGKVIV  292 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~--~~G~iv~  292 (375)
                      ++++...+.+.+..++..  + ..+++
T Consensus        77 ~atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           77 DATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             ECCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            999977778888888887  7 66665

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.83  E-value=0.0062  Score=56.11  Aligned_cols=131  Identities=11%  Similarity=0.138  Sum_probs=81.9

Q ss_pred             CEEEEECCCHHHHHHHHHHH-Hc-CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGAR-MH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~-~~-G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -+|.|+|+|.+|...++.++ .. ++ +++ ++++++++.+. ++++|...+++       ++.+.+    ...++|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~-~~vav~d~~~~~~~~~a~~~g~~~~~~-------~~~~~l----~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGV-KLVAACALDSNQLEWAKNELGVETTYT-------NYKDMI----DTENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSE-EEEEEECSCHHHHHHHHHTTCCSEEES-------CHHHHH----TTSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHhCCCcccC-------CHHHHh----cCCCCCEEE
Confidence            47999999999998777766 43 66 654 56777777754 45677754442       232222    233799999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHH---Hh----hcC-CceEEEEeeccccCCCCHHHHHHHHHcC
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI---AL----ACG-GRTLKGTTFGGIKTKSDLPTLLDKCKNK  339 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~---~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (375)
                      .++....+.+.+..+++.+  +-+.+..+.    ..+..   .+    ..+ ++.+.-..  ..+....+..+.+++.+|
T Consensus        77 i~tp~~~h~~~~~~al~~G--~~v~~eKp~----~~~~~~~~~l~~~a~~~~~~~~~~~~--~~r~~p~~~~~~~~i~~g  148 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAG--LNVFCEKPL----GLDFNEVDEMAKVIKSHPNQIFQSGF--MRRYDDSYRYAKKIVDNG  148 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTT--CEEEECSCC----CSCHHHHHHHHHHHHTCTTSCEECCC--GGGTCHHHHHHHHHHHTT
T ss_pred             EeCChHhHHHHHHHHHHCC--CEEEEcCCC----CCCHHHHHHHHHHHHhCCCCeEEEec--ccccCHHHHHHHHHHHcC
Confidence            9999887888888888874  445565432    22221   12    134 55543222  222333577888999988


Q ss_pred             CCC
Q 017201          340 EFK  342 (375)
Q Consensus       340 ~~~  342 (375)
                      .+-
T Consensus       149 ~iG  151 (346)
T 3cea_A          149 DIG  151 (346)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.83  E-value=0.006  Score=53.86  Aligned_cols=104  Identities=13%  Similarity=0.040  Sum_probs=64.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh---hcCCcE---EeCCCCCCcccHHHHHHhhcCC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK---AFGMTD---FINPDDEPNKSISELVKGITHG-M  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~---~lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~  261 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.++   +.+...   ..|-.+  .++..+.+.+.... .
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD--DAQCRDAVAQTIATFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            5889999988 9999988877778899 8999998877654433   333322   223333  22333333322211 2


Q ss_pred             CccEEEEccCCh---------h---------------hHHHHHHhcccCCeEEEEEccC
Q 017201          262 GVDYCFECTGVP---------S---------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       262 g~d~vid~~g~~---------~---------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++|+++++.|-.         +               ..+.++..++.++|+|+.++..
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            699999999742         1               2233455554434999999744

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.81  E-value=0.0093  Score=50.93  Aligned_cols=97  Identities=8%  Similarity=0.034  Sum_probs=60.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHH-HcCCCeEEEEcCChh-hHHHhh--hcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          192 SSVAVLGL-GTVGLGAVDGAR-MHGAAKIIGIDKNPW-KKEKGK--AFGMTDF-INPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~-~~G~~~V~~~~~~~~-~~~~~~--~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ++|||+|+ |.+|...++.+. ..|+ +|++++++++ +.+.+.  ..++..+ .|-.+   .+   .+.+...  ++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~~---~~~~~~~--~~d~   76 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN---PG---XLEQAVT--NAEV   76 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC---HH---HHHHHHT--TCSE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC---HH---HHHHHHc--CCCE
Confidence            46999998 999998777766 8899 9999999988 665542  2222222 13322   22   2223222  6899


Q ss_pred             EEEccCChhh-HHHHHHhcccC-CeEEEEEccCC
Q 017201          266 CFECTGVPSL-LSEALETTKVG-KGKVIVIGVGV  297 (375)
Q Consensus       266 vid~~g~~~~-~~~~~~~l~~~-~G~iv~~g~~~  297 (375)
                      +|++.|.... ...++..+... .++++.++...
T Consensus        77 vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           77 VFVGAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             EEESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             EEEcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            9999986311 33444444332 26888886554

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.80  E-value=0.01  Score=52.29  Aligned_cols=80  Identities=13%  Similarity=0.175  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC---cE-EeCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GT--VGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM---TD-FINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~--~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~---~~-v~~~~~~~~~~~~~~i~~~~  258 (375)
                      .|+++||+|+ |.  +|...++.+...|+ +|+.++++++..+.++    +++.   .. ..|-.+  .+++.+.+.+..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~   82 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN--DAEIETCFASIK   82 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS--SHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC--HHHHHHHHHHHH
Confidence            4789999987 66  99987777777899 8999988765444433    2332   11 123333  233333333322


Q ss_pred             CC-CCccEEEEccCC
Q 017201          259 HG-MGVDYCFECTGV  272 (375)
Q Consensus       259 ~~-~g~d~vid~~g~  272 (375)
                      .. ..+|++|++.|.
T Consensus        83 ~~~g~id~li~~Ag~   97 (266)
T 3oig_A           83 EQVGVIHGIAHCIAF   97 (266)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCeeEEEEcccc
Confidence            11 269999999873

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.80  E-value=0.0037  Score=57.62  Aligned_cols=98  Identities=18%  Similarity=0.167  Sum_probs=63.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC-----CCC-------ccc-HHHHHH
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD-----DEP-------NKS-ISELVK  255 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~-----~~~-------~~~-~~~~i~  255 (375)
                      -+|++|.|.|.|.+|+.++++++.+|+ +|++.+.++++.++++.++++.+ +..     +++       ... -.+.+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence            589999999999999999999999999 99999888777666666776433 110     000       000 011111


Q ss_pred             hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .+    +.++|+++.+.+-..+.+...|..+ |.++.-
T Consensus       251 ~l----k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~P  283 (355)
T 1c1d_A          251 TL----DCSVVAGAANNVIADEAASDILHAR-GILYAP  283 (355)
T ss_dssp             HC----CCSEECCSCTTCBCSHHHHHHHHHT-TCEECC
T ss_pred             hC----CCCEEEECCCCCCCCHHHHHHHHhC-CEEEEC
Confidence            11    4677777776653334666777775 655543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.80  E-value=0.0097  Score=52.38  Aligned_cols=168  Identities=15%  Similarity=0.239  Sum_probs=93.2

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc--EE--eCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT--DF--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~--~v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.+++++++.+.+.    +++..  ..  .|-.+  .++..+.+.+..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS--DEEVINGFEQIG   81 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC--HHHHHHHHHHHH
Confidence            5899999997 5  799988888888899 9999999887765443    33421  11  23333  223333222221


Q ss_pred             C-CCCccEEEEccCCh--------------h---------------hHHHHHHhcccCCeEEEEEccCCC-cccc-ch--
Q 017201          259 H-GMGVDYCFECTGVP--------------S---------------LLSEALETTKVGKGKVIVIGVGVD-AMVP-LN--  304 (375)
Q Consensus       259 ~-~~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~~~-~~~~-~~--  304 (375)
                      . -.++|+++++.|..              +               ....+...++++ |+|+.++...+ ...+ ..  
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-G~IVnisS~~~~~~~~~~~~Y  160 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEG-GSIVATTYLGGEFAVQNYNVM  160 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTC-EEEEEEECGGGTSCCTTTHHH
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CEEEEEeccccccCcccchhh
Confidence            1 12699999988731              0               112234455665 99999875433 1111 00  


Q ss_pred             --------------HHHhhcCCceEEEEeeccccCC-----CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcC
Q 017201          305 --------------VIALACGGRTLKGTTFGGIKTK-----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  365 (375)
Q Consensus       305 --------------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  365 (375)
                                    ..++-.+++++.....+...+.     ...++..+.+.+. ++...    .-.-+|+.++.-++.+
T Consensus       161 ~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~-~Pl~R----~g~peevA~~v~fL~S  235 (256)
T 4fs3_A          161 GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKER-APLKR----NVDQVEVGKTAAYLLS  235 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHH-STTSS----CCCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhc-CCCCC----CcCHHHHHHHHHHHhC
Confidence                          0113346788888776644221     1234444443322 22111    1234678888887765


Q ss_pred             C
Q 017201          366 P  366 (375)
Q Consensus       366 ~  366 (375)
                      .
T Consensus       236 d  236 (256)
T 4fs3_A          236 D  236 (256)
T ss_dssp             G
T ss_pred             c
Confidence            4

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.75  E-value=0.0077  Score=52.86  Aligned_cols=103  Identities=17%  Similarity=0.149  Sum_probs=72.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc----EEeCCCCCCcccHHHHHHhh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT----DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~----~v~~~~~~~~~~~~~~i~~~  257 (375)
                      +.....++++.+||-+|+| .|..+..+++..++ +|++++.+++..+.+++....    .++..+-   .++     ..
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~-----~~  116 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTK-----EF  116 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTC-----CC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccC-----CC
Confidence            4556678999999999998 68888899998787 999999999998888765421    1221111   010     11


Q ss_pred             cCCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          258 THGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       258 ~~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                       ....||+|+....-        ...+..+.++|+|+ |.++.....
T Consensus       117 -~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  161 (266)
T 3ujc_A          117 -PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDYC  161 (266)
T ss_dssp             -CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             -CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEec
Confidence             12379999876432        12478889999997 998887543

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.75  E-value=0.0067  Score=58.42  Aligned_cols=93  Identities=19%  Similarity=0.212  Sum_probs=69.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|...         .++.+.+    .  ..|+|+
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~---------~~l~ell----~--~aDiVi  337 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV---------VTMEYAA----D--KADIFV  337 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE---------CCHHHHT----T--TCSEEE
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe---------CCHHHHH----h--cCCEEE
Confidence            3578999999999999999999999999 9999999988754444556532         1222222    1  589999


Q ss_pred             EccCChhhH-HHHHHhcccCCeEEEEEccCC
Q 017201          268 ECTGVPSLL-SEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       268 d~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .+++....+ ...+..++++ ..++.++...
T Consensus       338 ~~~~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          338 TATGNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             ECSSSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             ECCCcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            998655444 4677889997 8888887543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.74  E-value=0.0075  Score=53.68  Aligned_cols=79  Identities=22%  Similarity=0.332  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC--c-EE--eCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--T-DF--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~--~-~v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.    +.+.  . .+  .|-.+  .+++.+.+.+...
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  107 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIRS  107 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            5789999988 9999988888888899 8999999887765432    2332  1 11  23333  1233333322211


Q ss_pred             -CCCccEEEEccC
Q 017201          260 -GMGVDYCFECTG  271 (375)
Q Consensus       260 -~~g~d~vid~~g  271 (375)
                       -.++|++|++.|
T Consensus       108 ~~g~iD~vi~~Ag  120 (279)
T 1xg5_A          108 QHSGVDICINNAG  120 (279)
T ss_dssp             HHCCCSEEEECCC
T ss_pred             hCCCCCEEEECCC
Confidence             126999999987

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.71  E-value=0.0046  Score=51.81  Aligned_cols=102  Identities=19%  Similarity=0.213  Sum_probs=69.8

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCC---cEEeCCCCCCcccHHHHHHh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGM---TDFINPDDEPNKSISELVKG  256 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~---~~v~~~~~~~~~~~~~~i~~  256 (375)
                      ...++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .+.   ..++..+-   .++    ..
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----~~   88 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNM----DK   88 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGG----GG
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHH----hh
Confidence            44678999999999975 888888999864 2399999999988877754    333   22332221   111    11


Q ss_pred             hcCCCCccEEEEccCC---------------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          257 ITHGMGVDYCFECTGV---------------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ..+ ..||+|+-..+-               ...+..+.+.|+++ |+++.....
T Consensus        89 ~~~-~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~  141 (197)
T 3eey_A           89 YID-CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIYY  141 (197)
T ss_dssp             TCC-SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred             hcc-CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEcc
Confidence            222 379999866532               24788999999997 998877543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.71  E-value=0.0072  Score=53.21  Aligned_cols=79  Identities=19%  Similarity=0.197  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc-----C--CcEE-eCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----G--MTDF-INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----g--~~~v-~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +  +..+ .|-.+  .+++.+.+.+...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE--PGDIDRLFEKARD   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4688999988 9999988887777899 8999999887765432 22     2  1111 23333  2333334443333


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      ..++|++|++.|
T Consensus        83 ~~gid~lv~~Ag   94 (260)
T 2z1n_A           83 LGGADILVYSTG   94 (260)
T ss_dssp             TTCCSEEEECCC
T ss_pred             hcCCCEEEECCC
Confidence            334999999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.71  E-value=0.014  Score=50.16  Aligned_cols=75  Identities=9%  Similarity=-0.023  Sum_probs=49.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCc--E-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT--D-FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~--~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++..  . ..|-.+   .+-.+.+.+.... .+|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~-~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS---HQEVEQLFEQLDS-IPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC---HHHHHHHHHSCSS-CCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC---HHHHHHHHHHHhh-cCCEE
Confidence            36899988 9999988888888899 8999999988876654 34322  1 223333   3333333332222 35999


Q ss_pred             EEccC
Q 017201          267 FECTG  271 (375)
Q Consensus       267 id~~g  271 (375)
                      |++.|
T Consensus        77 v~~Ag   81 (230)
T 3guy_A           77 VHSAG   81 (230)
T ss_dssp             EECCC
T ss_pred             EEeCC
Confidence            99987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.71  E-value=0.0091  Score=53.31  Aligned_cols=104  Identities=21%  Similarity=0.219  Sum_probs=63.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE----KGKAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~----~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++ .+    .+++.+... +  .|-.+  .+++.+.+.+... 
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV--VEDIVRMFEEAVKI  104 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4788999988 9999988888888899 89999887654 22    223345332 1  23322  1223332222211 


Q ss_pred             CCCccEEEEccCCh----------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          260 GMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       260 ~~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      -.++|++|++.|..          +               ..+.+...++.. |+++.++...
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  166 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSIT  166 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCGG
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEechh
Confidence            12699999998732          1               123445555565 8999987543

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.71  E-value=0.0025  Score=54.92  Aligned_cols=102  Identities=16%  Similarity=0.144  Sum_probs=69.4

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~  256 (375)
                      .....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+..
T Consensus        64 l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~------~d~~~~~~~  136 (229)
T 2avd_A           64 LARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL------KPALETLDE  136 (229)
T ss_dssp             HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HHHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE------cCHHHHHHH
Confidence            3455788999999998 6888999998763 3499999999988877754    2431   2222      223333333


Q ss_pred             hcCC---CCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          257 ITHG---MGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~~~---~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +...   ..||+|+-.....   ..+..+.++|+++ |.++...
T Consensus       137 ~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  179 (229)
T 2avd_A          137 LLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  179 (229)
T ss_dssp             HHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEC
Confidence            3221   3799987654332   4688899999997 9888754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.70  E-value=0.012  Score=51.01  Aligned_cols=77  Identities=21%  Similarity=0.297  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc-CCcEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-GMTDF-INPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-g~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ++++|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ++ +...+ .|-.+   .+..+.+.+  .-.++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~--~~~~id~   79 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---WEATERALG--SVGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHT--TCCCCCE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC---HHHHHHHHH--HcCCCCE
Confidence            5789999998 9999998888888899 8999999887766443 33 33222 23222   222222222  1126999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        80 vi~~Ag~   86 (244)
T 3d3w_A           80 LVNNAAV   86 (244)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.70  E-value=0.0063  Score=52.74  Aligned_cols=101  Identities=18%  Similarity=0.205  Sum_probs=68.1

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhh----cC-CcEEeCCCCCCcccHHHHHHhh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKA----FG-MTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~----lg-~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      +...++||++||=+|+|+ |..+..+|+..|.. +|++++.+++..+.+++    .+ ...+.....    +.. .. ..
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~----~p~-~~-~~  143 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR----FPE-KY-RH  143 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT----CGG-GG-TT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc----Ccc-cc-cc
Confidence            456899999999999974 88889999988743 89999999988776653    22 222332111    110 01 11


Q ss_pred             cCCCCccEEEEccCCh----hhHHHHHHhcccCCeEEEEE
Q 017201          258 THGMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .. ..+|+|+.....+    ..+..+.+.|+|+ |+++..
T Consensus       144 ~~-~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          144 LV-EGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             TC-CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cc-ceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            12 2689888666543    2567788999997 998765

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.69  E-value=0.007  Score=53.15  Aligned_cols=36  Identities=28%  Similarity=0.395  Sum_probs=32.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .+.+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus        30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            457899999999999999988889988999999876

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.69  E-value=0.012  Score=52.93  Aligned_cols=103  Identities=16%  Similarity=0.106  Sum_probs=62.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HH----hhhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EK----GKAFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~----~~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++. +.    +++.+....   .|-.+  .+++.+.+.+... 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD--EQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999988888888899 899998876532 22    233443322   23332  1222222222211 


Q ss_pred             CCCccEEEEccCCh-----------h---------------hHHHHHHhcccCCeEEEEEccC
Q 017201          260 GMGVDYCFECTGVP-----------S---------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       260 ~~g~d~vid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ..++|++|++.|..           +               ..+.++..+++. |+++.++..
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS~  184 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTASI  184 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECCT
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEech
Confidence            12699999987631           0               233455556666 899988744

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.69  E-value=0.0063  Score=58.34  Aligned_cols=92  Identities=25%  Similarity=0.329  Sum_probs=69.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..         .++.+.+    .  ..|+|+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~---------~~l~ell----~--~aDiVi  317 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV---------VTLDEIV----D--KGDFFI  317 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE---------CCHHHHT----T--TCSEEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe---------cCHHHHH----h--cCCEEE
Confidence            4578999999999999999999999999 9999999988764455566532         1222222    1  589999


Q ss_pred             EccCChhhH-HHHHHhcccCCeEEEEEccC
Q 017201          268 ECTGVPSLL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       268 d~~g~~~~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      -+.+....+ ...+..++++ ..++.+|..
T Consensus       318 ~~~~t~~lI~~~~l~~MK~g-ailiNvgrg  346 (479)
T 1v8b_A          318 TCTGNVDVIKLEHLLKMKNN-AVVGNIGHF  346 (479)
T ss_dssp             ECCSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred             ECCChhhhcCHHHHhhcCCC-cEEEEeCCC
Confidence            987665444 3677888987 888888754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.68  E-value=0.012  Score=51.49  Aligned_cols=80  Identities=19%  Similarity=0.202  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-FI--NPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .+  |-.+  .+++.+.+.+... -..+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSS--EADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTC--HHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999988 9999988887778899 899999988776544 3344322 22  2222  1223332322211 1158


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        82 d~lv~~Ag~   90 (253)
T 1hxh_A           82 NVLVNNAGI   90 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.68  E-value=0.022  Score=50.97  Aligned_cols=87  Identities=20%  Similarity=0.262  Sum_probs=62.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|....        .+..+.+.      +.|+||-++.
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~------~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA--------ATPCEVVE------SCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH------HCSEEEECCS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh------cCCEEEEEcC
Confidence            479999999999987777778898 99999999999988887776421        12333332      4689998888


Q ss_pred             ChhhHHHHH-------HhcccCCeEEEEEc
Q 017201          272 VPSLLSEAL-------ETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~-------~~l~~~~G~iv~~g  294 (375)
                      .+..+...+       ..++++ ..++.++
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           67 DPAAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             CHHHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            654454444       455665 5665554

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.66  E-value=0.0029  Score=54.43  Aligned_cols=101  Identities=16%  Similarity=0.053  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-----CCeEEEEcCChhhHHHhhhc----C-----C--cEEeCCCCCCcccH
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHG-----AAKIIGIDKNPWKKEKGKAF----G-----M--TDFINPDDEPNKSI  250 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G-----~~~V~~~~~~~~~~~~~~~l----g-----~--~~v~~~~~~~~~~~  250 (375)
                      .++++++||-+|+|. |..+..+++..+     ..+|++++.+++..+.+++.    +     .  ..++..+-  ....
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~~  153 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI--YQVN  153 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG--GGCC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh--Hhcc
Confidence            578999999999976 888889999876     12899999999888777542    3     1  12222211  0111


Q ss_pred             HHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEc
Q 017201          251 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       251 ~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ....   .....||+|+........+..+.+.|+++ |+++..-
T Consensus       154 ~~~~---~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  193 (227)
T 2pbf_A          154 EEEK---KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI  193 (227)
T ss_dssp             HHHH---HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred             cccC---ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            0000   11226999988776665678899999997 9887764

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.66  E-value=0.0022  Score=57.31  Aligned_cols=99  Identities=12%  Similarity=0.153  Sum_probs=69.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc---EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~~i  254 (375)
                      +.+..++.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    +..   .++.. +     +    
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d-----~----  123 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-G-----W----  123 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-C-----G----
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-C-----h----
Confidence            34566788999999999975 7888899988898 999999999888877642    321   12211 1     1    


Q ss_pred             HhhcCCCCccEEEEcc-----CC---hhhHHHHHHhcccCCeEEEEEcc
Q 017201          255 KGITHGMGVDYCFECT-----GV---PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~-----g~---~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .++.  ..||+|+...     +.   ...+..+.++|+|+ |+++....
T Consensus       124 ~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          124 EQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             GGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            1222  3799998652     21   24678899999998 99887653

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.66  E-value=0.0027  Score=54.96  Aligned_cols=102  Identities=21%  Similarity=0.163  Sum_probs=67.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC----CcEEeCCCCCCcccHHHHHHhhcC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      +...++++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++.-    ...++..+.   .+... .... .
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~-~~~~-~  141 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQE-YANI-V  141 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGGG-GTTT-S
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCccc-cccc-C
Confidence            445678999999999986 888899999887449999999998776664321    111221111   11100 0011 2


Q ss_pred             CCCccEEEEccCCh---h-hHHHHHHhcccCCeEEEEE
Q 017201          260 GMGVDYCFECTGVP---S-LLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       260 ~~g~d~vid~~g~~---~-~~~~~~~~l~~~~G~iv~~  293 (375)
                       ..+|+|+.....+   . .+..+.+.|+++ |.++..
T Consensus       142 -~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          142 -EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             -CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             -ccEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence             3699999765544   2 478889999997 988876

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.65  E-value=0.012  Score=53.36  Aligned_cols=90  Identities=22%  Similarity=0.304  Sum_probs=67.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++ +.+.++|+..+         ++.+.+.      ..|+|+.
T Consensus       140 l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell~------~aDvV~l  202 (307)
T 1wwk_A          140 LEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV---------DLETLLK------ESDVVTI  202 (307)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC---------CHHHHHH------HCSEEEE
T ss_pred             cCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc---------CHHHHHh------hCCEEEE
Confidence            467899999999999999999999999 99999998877 55667776431         1222221      4799999


Q ss_pred             ccCChh----hH-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPS----LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++...+    .+ ...+..++++ +.++.++..
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~g-a~lin~arg  234 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKT-AILINTSRG  234 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTT-CEEEECSCG
T ss_pred             ecCCChHHhhhcCHHHHhcCCCC-eEEEECCCC
Confidence            886432    22 3567888997 888888753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.65  E-value=0.0073  Score=52.72  Aligned_cols=80  Identities=18%  Similarity=0.073  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE---eCCCCCCcccHHHHHHhhcCCC
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF---INPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v---~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ...++++|||+|+ |++|...++.+...|+ +|+++++++++.+.+. .+.....   .|-.+   .+..+.+.+..  .
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~--~   83 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLAN---KEECSNLISKT--S   83 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS---HHHHHHHHHTC--S
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCC---HHHHHHHHHhc--C
Confidence            3467889999988 9999988887778898 9999999988876553 3332221   23222   22222332222  2


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus        84 ~id~li~~Ag~   94 (249)
T 3f9i_A           84 NLDILVCNAGI   94 (249)
T ss_dssp             CCSEEEECCC-
T ss_pred             CCCEEEECCCC
Confidence            69999999873

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.64  E-value=0.0034  Score=54.05  Aligned_cols=96  Identities=20%  Similarity=0.249  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC------CeEEEEcCChhhHHHhhhc----C-------CcEEeCCCCCCccc
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGA------AKIIGIDKNPWKKEKGKAF----G-------MTDFINPDDEPNKS  249 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~------~~V~~~~~~~~~~~~~~~l----g-------~~~v~~~~~~~~~~  249 (375)
                      .++++++||-+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +       ...++..+      
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d------  153 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD------  153 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC------
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC------
Confidence            578999999999986 8888888887762      3899999999888776532    2       11222211      


Q ss_pred             HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ...   .+.....||+|+...........+.+.|+++ |+++..
T Consensus       154 ~~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~  193 (227)
T 1r18_A          154 GRK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  193 (227)
T ss_dssp             GGG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             ccc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence            111   1122236999998777665668899999997 887765

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.63  E-value=0.0085  Score=52.37  Aligned_cols=82  Identities=20%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCCCC-cccHHHHHHhhcC-CCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEP-NKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~~~-~~~~~~~i~~~~~-~~g~d~  265 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.....-.-|.. .+++.+.+.+... -.++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999988 9999998888888899 999999998876654 344543322111111 1222222222211 116999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        84 lv~nAg~   90 (247)
T 3rwb_A           84 LVNNASI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999983

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.63  E-value=0.0097  Score=53.06  Aligned_cols=96  Identities=13%  Similarity=0.024  Sum_probs=62.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|||+|+ |.+|...++.+... |+ +|+++++++++...+...+...+. |..+   .+   .+.+...  ++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d---~~---~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN---QE---SMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC---HH---HHHHHTT--TCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC---HH---HHHHHHh--CCCEEEEe
Confidence            5899998 99999888877776 87 899999998877655555554432 3333   22   2333332  69999999


Q ss_pred             cCCh-------hhHHHHHHhcccCC-eEEEEEccCC
Q 017201          270 TGVP-------SLLSEALETTKVGK-GKVIVIGVGV  297 (375)
Q Consensus       270 ~g~~-------~~~~~~~~~l~~~~-G~iv~~g~~~  297 (375)
                      .+..       ......+..+...+ ++++.++...
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            8742       12234444444431 4788887654

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.61  E-value=0.013  Score=53.15  Aligned_cols=90  Identities=18%  Similarity=0.239  Sum_probs=66.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++. .++++|+...    +     +.+.+.      ..|+|+.
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~----~-----l~ell~------~aDvVvl  202 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKAV----S-----LEELLK------NSDVISL  202 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEEC----C-----HHHHHH------HCSEEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCceec----C-----HHHHHh------hCCEEEE
Confidence            467899999999999999999999999 999999888764 4566776531    1     222222      4799999


Q ss_pred             ccCChh----hH-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPS----LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++...+    .+ ...+..++++ +.++.++..
T Consensus       203 ~~P~~~~t~~li~~~~l~~mk~g-a~lIn~arg  234 (313)
T 2ekl_A          203 HVTVSKDAKPIIDYPQFELMKDN-VIIVNTSRA  234 (313)
T ss_dssp             CCCCCTTSCCSBCHHHHHHSCTT-EEEEESSCG
T ss_pred             eccCChHHHHhhCHHHHhcCCCC-CEEEECCCC
Confidence            886432    12 4567888997 888888653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.61  E-value=0.017  Score=51.24  Aligned_cols=103  Identities=18%  Similarity=0.249  Sum_probs=62.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|.+.++.+...|+ +|+.++++ .++.+.+    ++.+....   .|-.+  .+++.+.+.+... 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD--AEAIEQAIRETVEA  106 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999988887778899 88888544 3443322    33454322   23332  2233333332221 


Q ss_pred             CCCccEEEEccCCh----------h---------------hHHHHHHhcccCCeEEEEEccC
Q 017201          260 GMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       260 ~~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ..++|++|++.|..          +               ..+.+...+++. |+++.++..
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~  167 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN  167 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence            11699999998731          0               234455666676 999998653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.61  E-value=0.01  Score=53.26  Aligned_cols=78  Identities=18%  Similarity=0.273  Sum_probs=53.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcCCCCc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      -.|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++... +  .|-.+  .+++.+.+.+.  + ++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~--~-~i   87 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQD--LSSVRRFADGV--S-GA   87 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTC--HHHHHHHHHTC--C-CE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC--HHHHHHHHHhc--C-CC
Confidence            36789999988 9999988888878899 9999999988876553 344322 1  23333  12233333333  2 69


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        88 D~lv~nAg~   96 (291)
T 3rd5_A           88 DVLINNAGI   96 (291)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCcC
Confidence            999999873

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.57  E-value=0.008  Score=53.81  Aligned_cols=74  Identities=19%  Similarity=0.212  Sum_probs=52.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC-----cE-EeCCCCCCcccHHHHHHhhcCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM-----TD-FINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~-----~~-v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      --.++++||+|+|++|.+++..+...|+++|++++++.+|.+.+ +.++.     .. ..+.     +++.+.+.     
T Consensus       124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~-----~~l~~~l~-----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA-----RGIEDVIA-----  193 (283)
T ss_dssp             TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS-----TTHHHHHH-----
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH-----HHHHHHHh-----
Confidence            34688999999999999988888889997899999999887644 33321     11 2222     23433332     


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                       ++|+||++++.
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             58999999863

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.56  E-value=0.019  Score=51.62  Aligned_cols=105  Identities=17%  Similarity=0.208  Sum_probs=64.5

Q ss_pred             CCCCEEEEECC-CH--HHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEe--CCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GT--VGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFI--NPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~--~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.|+++||+|+ |.  +|.+.++.+...|+ +|++++++++..+.++    +.+...++  |-.+  .+++.+.+.+...
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  105 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD--AASIDAVFETLEK  105 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHH
Confidence            46789999987 66  99988888778899 8999998865443332    23322222  3333  2233333332221


Q ss_pred             -CCCccEEEEccCChh-----------------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          260 -GMGVDYCFECTGVPS-----------------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       260 -~~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       -.++|++|++.|...                             ..+.++..+.+. |+++.++...
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~  172 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYG  172 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGG
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehh
Confidence             126999999987320                             233455566676 9999987543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.56  E-value=0.01  Score=51.77  Aligned_cols=76  Identities=18%  Similarity=0.237  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-CcEE-eCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-MTDF-INPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.++. ...+ .|-.+   .+..+.+.+.. + ++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-~-~id~l   78 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEV-E-RLDVL   78 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHC-S-CCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCC---HHHHHHHHHHh-C-CCCEE
Confidence            4788999988 9999988888888898 9999999988776554332 2211 23333   23233333222 2 69999


Q ss_pred             EEccC
Q 017201          267 FECTG  271 (375)
Q Consensus       267 id~~g  271 (375)
                      |++.|
T Consensus        79 v~~Ag   83 (246)
T 2ag5_A           79 FNVAG   83 (246)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.55  E-value=0.015  Score=50.80  Aligned_cols=99  Identities=18%  Similarity=0.219  Sum_probs=63.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcC-CCCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~-~~g~d~vi  267 (375)
                      -+++|||+|+ |++|...++.+...|+ +|+++++++++.+..     ...++-.+  .+++.+.+.+... ..++|++|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~-----~~~~d~~d--~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNADH-----SFTIKDSG--EEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSSE-----EEECSCSS--HHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccccc-----ceEEEeCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999988 9999998888888899 899999887664321     11222222  1334333433322 22699999


Q ss_pred             EccCC-------hh-------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          268 ECTGV-------PS-------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       268 d~~g~-------~~-------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++.|.       .+                   ..+.+...++++ |+++.++...
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  147 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGASA  147 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEechh
Confidence            99973       10                   233455566665 8999987543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.55  E-value=0.0069  Score=53.17  Aligned_cols=80  Identities=14%  Similarity=0.173  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE---eCCCCCCcccHHHHHHhhcCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF---INPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v---~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+....   .|-.+  .+++.+.+.+.....
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN--EDEVTAFLNAADAHA   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC--HHHHHHHHHHHHhhC
Confidence            5789999988 9999988888888899 8999999988765443    2343221   23333  123322222221112


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            79999999983

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.54  E-value=0.0068  Score=52.16  Aligned_cols=101  Identities=22%  Similarity=0.223  Sum_probs=69.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcEEeCCCCCCcccHHHHHHhh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      +.....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++.    +...++..+      ..+   ..
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d------~~~---~~  129 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD------GTL---GY  129 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC------GGG---CC
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECC------ccc---cc
Confidence            34566788999999999985 88888888875 5 999999999888887653    211222221      111   01


Q ss_pred             cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .....||+|+....-......+.+.|+++ |+++..-.
T Consensus       130 ~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          130 EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             ccCCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            11236999987765544456788999997 98877643

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.54  E-value=0.024  Score=51.61  Aligned_cols=89  Identities=16%  Similarity=0.210  Sum_probs=62.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      ..+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+.      +.|+||-++
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~e~~~------~aDvVi~~v   95 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH--------EQARAAAR------DADIVVSML   95 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE--------SSHHHHHT------TCSEEEECC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee--------CCHHHHHh------cCCEEEEEC
Confidence            4589999999999987777778898 99999999999888877776432        12322221      478888888


Q ss_pred             CChhhHHHHHH------hcccCCeEEEEEcc
Q 017201          271 GVPSLLSEALE------TTKVGKGKVIVIGV  295 (375)
Q Consensus       271 g~~~~~~~~~~------~l~~~~G~iv~~g~  295 (375)
                      ..+..+...+.      .+.++ ..++.++.
T Consensus        96 p~~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           96 ENGAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             SSHHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             CCHHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            86645454442      45565 56665543

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.53  E-value=0.0012  Score=57.91  Aligned_cols=100  Identities=22%  Similarity=0.272  Sum_probs=69.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i  254 (375)
                      +.....+.++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-   .+     
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~-----   97 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AG-----   97 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TT-----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---Hh-----
Confidence            44566789999999999976 8888899998887 99999999988777653    3321   1222111   11     


Q ss_pred             HhhcCCCCccEEEEcc------CChhhHHHHHHhcccCCeEEEEEc
Q 017201          255 KGITHGMGVDYCFECT------GVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                        +.....||+|+...      .-...+..+.++|+|+ |+++...
T Consensus        98 --~~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           98 --YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             --CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             --CCcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence              11133799998532      1234688899999997 9888764

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.52  E-value=0.0081  Score=51.53  Aligned_cols=97  Identities=22%  Similarity=0.268  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cC-------CcEEeCCCCCCcccHHHHH
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FG-------MTDFINPDDEPNKSISELV  254 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg-------~~~v~~~~~~~~~~~~~~i  254 (375)
                      .++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    .+       ...++.. +     ...  
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~-d-----~~~--  144 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-D-----GRM--  144 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES-C-----GGG--
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC-C-----ccc--
Confidence            378999999999985 8888889988763 299999999988877653    22       1112221 1     100  


Q ss_pred             HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEc
Q 017201          255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       .......||+|+........+..+.+.|+++ |+++..-
T Consensus       145 -~~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  182 (226)
T 1i1n_A          145 -GYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPV  182 (226)
T ss_dssp             -CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             -CcccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence             0111236999987776555678899999997 9887753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.52  E-value=0.0092  Score=51.63  Aligned_cols=97  Identities=14%  Similarity=0.103  Sum_probs=61.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .+|||+|+ |.+|...++.+...| + +|+++++++++.+.+...++..+ .|-.+   .+   .+.+...  ++|+||.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d---~~---~~~~~~~--~~D~vv~   94 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLN---HA---ALKQAMQ--GQDIVYA   94 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTC---HH---HHHHHHT--TCSEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCC---HH---HHHHHhc--CCCEEEE
Confidence            57999998 999999888888888 7 99999999887654433333322 23322   22   2222222  5899999


Q ss_pred             ccCChhh---HHHHHHhcccC-CeEEEEEccCC
Q 017201          269 CTGVPSL---LSEALETTKVG-KGKVIVIGVGV  297 (375)
Q Consensus       269 ~~g~~~~---~~~~~~~l~~~-~G~iv~~g~~~  297 (375)
                      +.+....   .+.++..+... .++++.++...
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             cCCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            9886532   23344444332 26888887543

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.51  E-value=0.014  Score=49.49  Aligned_cols=97  Identities=16%  Similarity=0.143  Sum_probs=68.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE--EeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ..+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...  ++..+-   .+       ......|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~-------~~~~~~~  108 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FD-------WTPDRQW  108 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT---TS-------CCCSSCE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc---cc-------CCCCCce
Confidence            3478889999999975 7777888877 77 9999999999998888765322  221111   11       1233479


Q ss_pred             cEEEEccCC--------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          264 DYCFECTGV--------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       264 d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      |+|+....-        ...+..+.+.|+++ |.++.....
T Consensus       109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             eEEEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            999865432        34578889999997 998877543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.50  E-value=0.0096  Score=52.38  Aligned_cols=79  Identities=14%  Similarity=0.222  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcCC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITHG-  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~-  260 (375)
                      +|+++||+|+ +++|.+.++.....|+ +|+.+++++++.+.+    ++.|....   .|-.+  .++..+.+.+.... 
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK--KKDVEEFVRRTFETY   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5899999988 9999988877778899 999999998887543    34554332   23333  23333333332211 


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|+++++.|
T Consensus        83 G~iDiLVNNAG   93 (254)
T 4fn4_A           83 SRIDVLCNNAG   93 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            26999999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.50  E-value=0.011  Score=52.14  Aligned_cols=79  Identities=11%  Similarity=0.108  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKG----KAFGMTDF---INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~---~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~  258 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++..   +.+.+    ++.+....   .|-.+  .++..+.+.+..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   86 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN--EEEVAKLFDFAE   86 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence            5789999988 9999988888888899 8998866533   32222    22343221   23333  122332232221


Q ss_pred             CC-CCccEEEEccC
Q 017201          259 HG-MGVDYCFECTG  271 (375)
Q Consensus       259 ~~-~g~d~vid~~g  271 (375)
                      .. .++|++|++.|
T Consensus        87 ~~~g~iD~lvnnAg  100 (262)
T 3ksu_A           87 KEFGKVDIAINTVG  100 (262)
T ss_dssp             HHHCSEEEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            11 26999999998

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.50  E-value=0.0043  Score=53.78  Aligned_cols=101  Identities=19%  Similarity=0.236  Sum_probs=68.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCcE---EeCCCCCCcccHHHHHHhh
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTD---FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~~i~~~  257 (375)
                      ....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|...   ++.      .+..+.+.++
T Consensus        68 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~------~d~~~~l~~l  140 (232)
T 3cbg_A           68 ISLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL------GPALATLEQL  140 (232)
T ss_dssp             HHHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE------SCHHHHHHHH
T ss_pred             HHhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHHH
Confidence            345678899999998 6888999999873 2399999999988877754    24321   222      2333334443


Q ss_pred             cCC---CCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THG---MGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~---~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...   ..||+||-....   ...++.+.++|+++ |.++.-.
T Consensus       141 ~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  182 (232)
T 3cbg_A          141 TQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN  182 (232)
T ss_dssp             HTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred             HhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence            321   379999844332   23578899999997 9887653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.50  E-value=0.011  Score=51.59  Aligned_cols=79  Identities=16%  Similarity=0.183  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF-INPDDEPNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...+ .|-.+  .+++.+.+.+... -.++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999988888888899 9999999988766543 3454322 23333  1223333322211 125999


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      +|++.|
T Consensus        81 lvn~Ag   86 (245)
T 1uls_A           81 VVHYAG   86 (245)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.49  E-value=0.0056  Score=55.25  Aligned_cols=95  Identities=19%  Similarity=0.092  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-hhhcCCc--EEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      -.+.+|+|+|+|++|.+++..+...|+.+|++++++++|.+. ++.++..  .++        ++ +.+.+..  .++|+
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--------~~-~~~~~~~--~~aDi  207 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--------SL-AEAETRL--AEYDI  207 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--------CH-HHHHHTG--GGCSE
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--------eH-HHHHhhh--ccCCE
Confidence            367899999999999998888888998799999999888654 4455542  122        11 1222222  26999


Q ss_pred             EEEccCChhh-----HHHHHHhcccCCeEEEEEcc
Q 017201          266 CFECTGVPSL-----LSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       266 vid~~g~~~~-----~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ||++++....     .......+.++ ..++.+..
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            9999975421     00112345665 66666653

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.49  E-value=0.016  Score=51.35  Aligned_cols=105  Identities=21%  Similarity=0.210  Sum_probs=64.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHH----hhhcCCcEE---eCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEK----GKAFGMTDF---INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~~----~~~lg~~~v---~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.|+++||+|+ +++|.+.++.+...|+ +|++++++ .++.+.    +++.+....   .|-.+  .+++.+.+.+...
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   92 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ--VPEIVKLFDQAVA   92 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            35789999988 9999988888888899 88887654 443332    233444322   23332  2233333332211


Q ss_pred             -CCCccEEEEccCCh----------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          260 -GMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       260 -~~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       -.++|++|++.|..          +               ..+.++..+.++ |+++.++...
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence             11699999998741          1               234566667776 9999987654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.49  E-value=0.012  Score=52.36  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .  .|-.+  .++..+.+.+... -.++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD--EQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC--HHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999988 9999988887778899 999999998876654 3444321 1  23333  1222222222211 1169


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus       105 D~lvnnAg~  113 (277)
T 3gvc_A          105 DKLVANAGV  113 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.48  E-value=0.03  Score=50.75  Aligned_cols=87  Identities=21%  Similarity=0.217  Sum_probs=61.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+.      ..|+||-++.
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~~~~~------~aDvvi~~vp   86 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC--------ESPAEVIK------KCKYTIAMLS   86 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH------HCSEEEECCS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc--------CCHHHHHH------hCCEEEEEcC
Confidence            579999999999987777778898 99999999999988888776421        12333332      4688888887


Q ss_pred             ChhhHHHHH-------HhcccCCeEEEEEc
Q 017201          272 VPSLLSEAL-------ETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~-------~~l~~~~G~iv~~g  294 (375)
                      .+..+...+       ..+.++ ..++.++
T Consensus        87 ~~~~~~~v~~~~~~l~~~l~~g-~~vv~~s  115 (310)
T 3doj_A           87 DPCAALSVVFDKGGVLEQICEG-KGYIDMS  115 (310)
T ss_dssp             SHHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             CHHHHHHHHhCchhhhhccCCC-CEEEECC
Confidence            764555444       344554 5555554

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.47  E-value=0.02  Score=50.99  Aligned_cols=103  Identities=19%  Similarity=0.188  Sum_probs=62.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHHh----hhcCCcEE---eCCCCCCccc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN------------PWKKEKG----KAFGMTDF---INPDDEPNKS  249 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~------------~~~~~~~----~~lg~~~v---~~~~~~~~~~  249 (375)
                      .|+++||+|+ |++|...++.+...|+ +|++++++            .++.+.+    +..+....   .|-.+  .++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~   85 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD--RAA   85 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC--HHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC--HHH
Confidence            5789999988 9999988888888899 89999876            3333322    23343221   23333  122


Q ss_pred             HHHHHHhhcC-CCCccEEEEccCCh--------h---------------hHHHHHHhcccCCeEEEEEccC
Q 017201          250 ISELVKGITH-GMGVDYCFECTGVP--------S---------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       250 ~~~~i~~~~~-~~g~d~vid~~g~~--------~---------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.+.+.+... ..++|++|++.|..        +               ..+.++..+.+. |+++.++..
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  155 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEeccc
Confidence            3222322211 12699999998741        1               123344455565 899988754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.46  E-value=0.019  Score=49.92  Aligned_cols=79  Identities=19%  Similarity=0.210  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC----CcEE-eCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG----MTDF-INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg----~~~v-~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+.    ...+ .|-.+  .+++.+.+.+... -.
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            4678999988 9999988888888899 8999999887665432 222    1111 23332  1223332222211 12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      .+|++|++.|
T Consensus        82 ~id~li~~Ag   91 (251)
T 1zk4_A           82 PVSTLVNNAG   91 (251)
T ss_dssp             SCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            5999999987

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.45  E-value=0.0099  Score=55.23  Aligned_cols=91  Identities=21%  Similarity=0.308  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCe-EEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAK-IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~-V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ + |++.++++++.+.+.++|+..+        .++.+.+.      ..|+|+
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~------~aDvV~  226 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV--------ENIEELVA------QADIVT  226 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC--------SSHHHHHH------TCSEEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec--------CCHHHHHh------cCCEEE
Confidence            478899999999999999999999999 6 9999988776666677775432        12322222      478988


Q ss_pred             EccCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201          268 ECTGVPS----LL-SEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       268 d~~g~~~----~~-~~~~~~l~~~~G~iv~~g~  295 (375)
                      .++...+    .+ ...+..++++ +.++.++.
T Consensus       227 l~~P~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          227 VNAPLHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             ECCCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             ECCCCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            8876431    22 3566778886 77877763

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.45  E-value=0.0095  Score=52.31  Aligned_cols=79  Identities=23%  Similarity=0.242  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe--CCCCCCcccHHHHHHhhcC-CCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI--NPDDEPNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~--~~~~~~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+..+++.. .++  |-.+  .+++.+.+.+... -.++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~--~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLED--ERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTC--HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4688999988 9999988888888898 89999988777333344432 222  3332  1233333332211 126999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        81 lv~~Ag~   87 (256)
T 2d1y_A           81 LVNNAAI   87 (256)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.44  E-value=0.026  Score=50.65  Aligned_cols=87  Identities=20%  Similarity=0.213  Sum_probs=61.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|....        .+..+.+.      +.|+||.++.
T Consensus         6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~------~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA--------STAKAIAE------QCDVIITMLP   70 (299)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------SSHHHHHH------HCSEEEECCS
T ss_pred             ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCeec--------CCHHHHHh------CCCEEEEECC
Confidence            379999999999987777777898 89999999998888777665321        12333232      4899999998


Q ss_pred             ChhhHHHHH-------HhcccCCeEEEEEc
Q 017201          272 VPSLLSEAL-------ETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~-------~~l~~~~G~iv~~g  294 (375)
                      .+..+...+       ..+.++ ..++.++
T Consensus        71 ~~~~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           71 NSPHVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             CHHHHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            665555554       456665 6666554

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.44  E-value=0.0065  Score=53.84  Aligned_cols=80  Identities=9%  Similarity=0.040  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      .++++||+|+ |++|...++.+...|+ +|++++++.++.+.+....... ..|-.+  .+++.+.+.+... ..++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD--KYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC--HHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC--HHHHHHHHHHHHHHCCCCCEE
Confidence            4688999988 9999988888888899 8999999988776543322221 123332  1233333322211 1169999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999974

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.44  E-value=0.0075  Score=53.64  Aligned_cols=74  Identities=15%  Similarity=0.160  Sum_probs=51.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -++.+++|+|+|++|.++++.+...|+ +|+++++++++.+. +++++...-++..+  .++       +.. .++|++|
T Consensus       117 l~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~-------~~~-~~~DivV  185 (271)
T 1nyt_A          117 RPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS--MDE-------LEG-HEFDLII  185 (271)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC--SGG-------GTT-CCCSEEE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec--HHH-------hcc-CCCCEEE
Confidence            368899999999999999999889997 99999999888644 44454310011111  011       111 3799999


Q ss_pred             EccCCh
Q 017201          268 ECTGVP  273 (375)
Q Consensus       268 d~~g~~  273 (375)
                      ++++..
T Consensus       186 n~t~~~  191 (271)
T 1nyt_A          186 NATSSG  191 (271)
T ss_dssp             ECCSCG
T ss_pred             ECCCCC
Confidence            999865

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.44  E-value=0.023  Score=51.06  Aligned_cols=80  Identities=14%  Similarity=0.276  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEe--CCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFI--NPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .|+++||+|+ |  ++|...++.+...|+ +|++++++++..+.++    +.+....+  |-.+  .+++.+.+.+....
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  105 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD--AESVDNMFKVLAEE  105 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999988 5  899987777778899 8999998876544433    23432222  3333  22333333322111


Q ss_pred             -CCccEEEEccCC
Q 017201          261 -MGVDYCFECTGV  272 (375)
Q Consensus       261 -~g~d~vid~~g~  272 (375)
                       .++|++|++.|.
T Consensus       106 ~g~iD~lVnnAG~  118 (296)
T 3k31_A          106 WGSLDFVVHAVAF  118 (296)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             269999999973

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.42  E-value=0.014  Score=53.93  Aligned_cols=92  Identities=16%  Similarity=0.224  Sum_probs=67.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++.+.+.++++|+..+        .++.+.+.      ..|+|+-
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~------~aDvV~l  226 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV--------EDLNEMLP------KCDVIVI  226 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC--------SCHHHHGG------GCSEEEE
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc--------CCHHHHHh------cCCEEEE
Confidence            468899999999999999999999999 89999988777777777776532        12332221      4799988


Q ss_pred             ccCCh-h---h-HHHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVP-S---L-LSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~-~---~-~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++... +   . -...+..++++ ..++.++..
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~g-ailIN~aRG  258 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKG-VLIVNNARG  258 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCC-CEEEECcCc
Confidence            87632 1   1 24677888887 888887643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.42  E-value=0.011  Score=50.55  Aligned_cols=96  Identities=14%  Similarity=0.192  Sum_probs=59.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. -+...+ .|..+   .+   .+.+...  ++|+||++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d---~~---~~~~~~~--~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHLKVKKADVSS---LD---EVCEVCK--GADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTEEEECCCTTC---HH---HHHHHHT--TCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-CceEEEEecCCC---HH---HHHHHhc--CCCEEEEe
Confidence            58999998 9999999888888898 9999999987754332 122221 12222   22   2223222  59999999


Q ss_pred             cCCh-----------hhHHHHHHhcccCC-eEEEEEccCC
Q 017201          270 TGVP-----------SLLSEALETTKVGK-GKVIVIGVGV  297 (375)
Q Consensus       270 ~g~~-----------~~~~~~~~~l~~~~-G~iv~~g~~~  297 (375)
                      .+..           ......++.+...+ .+++.++...
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            8753           12223444444331 4888887543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.42  E-value=0.027  Score=50.51  Aligned_cols=106  Identities=18%  Similarity=0.117  Sum_probs=62.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHH----hhhcCCcEEeCCCCCC-cccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEK----GKAFGMTDFINPDDEP-NKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~--~~~~----~~~lg~~~v~~~~~~~-~~~~~~~i~~~~~-~  260 (375)
                      .|+++||+|+ |++|...++.+...|+ +|++++++.+  +.+.    +++.+....+..-|.. .+++.+.+.+... -
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999988 9999988888888899 8998887632  2222    2334543322222211 1222222222211 1


Q ss_pred             CCccEEEEccCCh-----------h---------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          261 MGVDYCFECTGVP-----------S---------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       261 ~g~d~vid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .++|++|++.|..           +               ..+.++..+.++ |+|+.++...
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~  188 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQ  188 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChh
Confidence            2699999998731           0               223345556666 8999987543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.41  E-value=0.007  Score=53.44  Aligned_cols=79  Identities=11%  Similarity=0.117  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++. +.+++.++..+ .|-.+  .+++.+.+.+... ..++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC--ETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS--HHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC--HHHHHHHHHHHHHhcCCCCE
Confidence            4678999988 9999988887778899 899999887664 33445565433 23333  2233333332211 126999


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      +|++.|
T Consensus       103 lv~nAg  108 (260)
T 3gem_A          103 VVHNAS  108 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.41  E-value=0.035  Score=50.09  Aligned_cols=88  Identities=24%  Similarity=0.243  Sum_probs=60.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|...+.....    +.       .  .+.|+||-++.
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~----e~-------~--~~aDvvi~~vp   73 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAR----EF-------A--GVVDALVILVV   73 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSST----TT-------T--TTCSEEEECCS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHH----HH-------H--hcCCEEEEECC
Confidence            579999999999987777777898 9999999999999888888754222111    11       1  14788888887


Q ss_pred             ChhhHHHHH-------HhcccCCeEEEEEc
Q 017201          272 VPSLLSEAL-------ETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~-------~~l~~~~G~iv~~g  294 (375)
                      .+..+...+       ..++++ ..++.++
T Consensus        74 ~~~~~~~v~~~~~~l~~~l~~g-~ivv~~s  102 (303)
T 3g0o_A           74 NAAQVRQVLFGEDGVAHLMKPG-SAVMVSS  102 (303)
T ss_dssp             SHHHHHHHHC--CCCGGGSCTT-CEEEECS
T ss_pred             CHHHHHHHHhChhhHHhhCCCC-CEEEecC
Confidence            764455443       344554 5555444

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.40  E-value=0.014  Score=51.12  Aligned_cols=83  Identities=16%  Similarity=0.081  Sum_probs=52.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----c---CCcE-EeCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----F---GMTD-FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----l---g~~~-v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.|+++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .   .... ..|-...+.++..+.+.+...
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            46789999988 9999988887778899 99999999887654421    1   1222 223211111233333332211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       ..++|++|++.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             1269999999874

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.40  E-value=0.016  Score=54.77  Aligned_cols=95  Identities=19%  Similarity=0.268  Sum_probs=68.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .+++|+|+|.|.+|...++.++..|. .|++++.++++.+.+++.|...++ |..+   .++   +.+. +-.++|+||-
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat~---~~~---L~~a-gi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDATR---MDL---LESA-GAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTTC---HHH---HHHT-TTTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCCC---HHH---HHhc-CCCccCEEEE
Confidence            45679999999999999999999998 999999999999999988876544 3333   333   3332 3337999999


Q ss_pred             ccCChhh---HHHHHHhcccCCeEEEEE
Q 017201          269 CTGVPSL---LSEALETTKVGKGKVIVI  293 (375)
Q Consensus       269 ~~g~~~~---~~~~~~~l~~~~G~iv~~  293 (375)
                      +++.+..   +-...+.+.+. .+++.-
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            9987643   22344455565 566554

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.40  E-value=0.007  Score=50.07  Aligned_cols=100  Identities=20%  Similarity=0.225  Sum_probs=69.2

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC-c--EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-T--DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~-~--~v~~~~~~~~~~~~~~i  254 (375)
                      +.....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. .  .++.      .++.+.+
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~------~d~~~~~   95 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEAL   95 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHHH
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe------cCHHHhc
Confidence            34556788999999999976 88888888876 5 99999999988877754    333 1  1221      2333322


Q ss_pred             HhhcCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          255 KGITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .   ....+|+|+.....   ...+..+.+.|+++ |.++...
T Consensus        96 ~---~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           96 C---KIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             T---TSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             c---cCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            2   21279999866542   34678888999997 9888764

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.40  E-value=0.016  Score=53.17  Aligned_cols=90  Identities=26%  Similarity=0.391  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++ +.+.++|+...         ++.+.+    .  ..|+|+.
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell----~--~aDvV~l  225 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQL---------PLEEIW----P--LCDFITV  225 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEEC---------CHHHHG----G--GCSEEEE
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCceeC---------CHHHHH----h--cCCEEEE
Confidence            467899999999999999999999999 99999987766 35666776421         222222    1  5899999


Q ss_pred             ccCChh----hH-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPS----LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +....+    .+ ...+..++++ +.++.++..
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~g-ailIN~arg  257 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKG-VRVVNCARG  257 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTT-EEEEECSCT
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCC-cEEEECCCc
Confidence            886442    22 4677889997 888888753

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.40  E-value=0.0088  Score=54.46  Aligned_cols=102  Identities=25%  Similarity=0.261  Sum_probs=69.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i  254 (375)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++    .|...  ++.. +     ..+. 
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~-d-----~~~~-  138 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG-D-----GYYG-  138 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-C-----GGGC-
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC-C-----hhhc-
Confidence            44567889999999999986 8888888887652 379999999998887764    34322  2221 1     1110 


Q ss_pred             HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEc
Q 017201          255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                        ......||+|+...........+.+.|+++ |+++..-
T Consensus       139 --~~~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          139 --VPEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             --CGGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             --cccCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence              111236999998766543446788999997 9887763

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.39  E-value=0.011  Score=52.17  Aligned_cols=80  Identities=16%  Similarity=0.304  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc----CCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++    +... +  .|-.+  .+++.+.+.+... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT--PEGVDAVVESVRSS   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4688999988 9999988888888899 9999999887765432 22    4322 1  23333  1233332322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        83 ~g~id~lv~~Ag~   95 (263)
T 3ai3_A           83 FGGADILVNNAGT   95 (263)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1169999999873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.38  E-value=0.011  Score=51.54  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-HhhhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKE-KGKAFGMTD-F--INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~-~~~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++ ++.+ .+++.+... .  .|-.+  .+++.+.+.+... -.+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHcCC
Confidence            4788999988 9999988888888899 899999887 6554 334445322 1  23332  1233333322211 126


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus        83 id~lv~nAg~   92 (249)
T 2ew8_A           83 CDILVNNAGI   92 (249)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.38  E-value=0.0078  Score=49.82  Aligned_cols=100  Identities=17%  Similarity=0.238  Sum_probs=66.8

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHHhhc
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...+++|++||=+|+|. |..+..+++. +. +|++++.+++..+.+++    .+.+  .++. .+  ..+    +....
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~--~~~----l~~~~   86 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG--HEN----LDHYV   86 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC--GGG----GGGTC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc--HHH----HHhhc
Confidence            44678999999999975 8888888888 66 99999999988877653    3432  2332 11  011    12223


Q ss_pred             CCCCccEEEEccCC-----------h----hhHHHHHHhcccCCeEEEEEccC
Q 017201          259 HGMGVDYCFECTGV-----------P----SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       259 ~~~g~d~vid~~g~-----------~----~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                       ...||+|+-+.+.           .    ..+..+.+.|+|+ |+++.+...
T Consensus        87 -~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  137 (185)
T 3mti_A           87 -REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIYY  137 (185)
T ss_dssp             -CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC-
T ss_pred             -cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEeC
Confidence             3379999765321           1    2467888999997 998877544

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.37  E-value=0.023  Score=49.63  Aligned_cols=73  Identities=19%  Similarity=0.177  Sum_probs=50.5

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccE
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ...|.++||+|+ |++|...++.+...|+ +|++++++++..+   +++...++ |- .   ++..+.+.+..   ++|+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~---~~~~~~~~~D~-~---~~~~~~~~~~~---~iD~   84 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLK---RSGHRYVVCDL-R---KDLDLLFEKVK---EVDI   84 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH---HTCSEEEECCT-T---TCHHHHHHHSC---CCSE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHH---hhCCeEEEeeH-H---HHHHHHHHHhc---CCCE
Confidence            456789999998 9999988888888899 8999998875433   33422222 22 1   34444444332   6999


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      +|++.|
T Consensus        85 lv~~Ag   90 (249)
T 1o5i_A           85 LVLNAG   90 (249)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.37  E-value=0.014  Score=51.79  Aligned_cols=72  Identities=14%  Similarity=0.133  Sum_probs=51.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      -.+.+++|+|+|++|.+++..+...|+.+|++++++++|.+.+ ++++.  ..++...     ++       .. .++|+
T Consensus       118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~-----~l-------~~-~~~Di  184 (272)
T 3pwz_A          118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE-----AL-------EG-QSFDI  184 (272)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG-----GG-------TT-CCCSE
T ss_pred             ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH-----Hh-------cc-cCCCE
Confidence            3688999999999999988888889977999999999887654 44443  2223221     11       11 37999


Q ss_pred             EEEccCCh
Q 017201          266 CFECTGVP  273 (375)
Q Consensus       266 vid~~g~~  273 (375)
                      ||++++..
T Consensus       185 vInaTp~g  192 (272)
T 3pwz_A          185 VVNATSAS  192 (272)
T ss_dssp             EEECSSGG
T ss_pred             EEECCCCC
Confidence            99998643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.37  E-value=0.014  Score=51.67  Aligned_cols=86  Identities=12%  Similarity=0.077  Sum_probs=59.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +.+++|+|+|++|.+++..+...|. +|+++.++++|.+.+.+++.. +....+     +         . ++|+||+++
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~-----l---------~-~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP-----K---------S-AFDLIINAT  180 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC-----S---------S-CCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH-----h---------c-cCCEEEEcc
Confidence            8999999999999999888888895 999999999988665577743 333322     1         1 689999998


Q ss_pred             CCh----hhHH--HHHHhcccCCeEEEEEc
Q 017201          271 GVP----SLLS--EALETTKVGKGKVIVIG  294 (375)
Q Consensus       271 g~~----~~~~--~~~~~l~~~~G~iv~~g  294 (375)
                      +..    ..+.  .....++++ ..++.+-
T Consensus       181 p~Gm~~~~~l~~~~l~~~l~~~-~~v~D~v  209 (269)
T 3phh_A          181 SASLHNELPLNKEVLKGYFKEG-KLAYDLA  209 (269)
T ss_dssp             TTCCCCSCSSCHHHHHHHHHHC-SEEEESC
T ss_pred             cCCCCCCCCCChHHHHhhCCCC-CEEEEeC
Confidence            532    0111  122256675 6666553

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.37  E-value=0.011  Score=51.97  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD---FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +++...   ..|-.+  .+++.+.+.+... ..++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISK--EADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHhcCCC
Confidence            4689999988 9999988888778899 8999999988876543 344322   123332  1233333322211 1169


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |++|++.|
T Consensus        85 d~li~~Ag   92 (261)
T 3n74_A           85 DILVNNAG   92 (261)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.35  E-value=0.013  Score=51.57  Aligned_cols=95  Identities=23%  Similarity=0.381  Sum_probs=65.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc-EEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      ++++++||-+|+|. |..++.+++ .|+ +|++++.++...+.+++    .+.. .++.      .++.+.   +.. ..
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~------~d~~~~---~~~-~~  184 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEAA---LPF-GP  184 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHHH---GGG-CC
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE------CChhhc---CcC-CC
Confidence            67899999999976 777777776 577 99999999988877754    2332 2221      233322   222 37


Q ss_pred             ccEEEEccCC---hhhHHHHHHhcccCCeEEEEEccC
Q 017201          263 VDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       263 ~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ||+|+.+...   ...+..+.++|+++ |+++..+..
T Consensus       185 fD~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~  220 (254)
T 2nxc_A          185 FDLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             CCEEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeec
Confidence            9999976532   23577888999997 999887644

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.35  E-value=0.0056  Score=53.21  Aligned_cols=98  Identities=14%  Similarity=0.131  Sum_probs=66.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC----CcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ..+|.+||-+|+| .|..+..+++..+. +|++++.+++-.+.+++..    ....+..     .+.......+..+ .|
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~-----~~a~~~~~~~~~~-~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK-----GLWEDVAPTLPDG-HF  129 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE-----SCHHHHGGGSCTT-CE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe-----ehHHhhccccccc-CC
Confidence            4789999999997 48888888887776 8999999998888876532    2221211     1233333333333 79


Q ss_pred             cEE-EEccCCh----------hhHHHHHHhcccCCeEEEEEc
Q 017201          264 DYC-FECTGVP----------SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       264 d~v-id~~g~~----------~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      |.| +|+....          ..+.++.++|+|+ |+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            987 5654321          2467789999998 9998764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.35  E-value=0.01  Score=52.95  Aligned_cols=79  Identities=22%  Similarity=0.155  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h---cCCcEEe---CCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMTDFI---NPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lg~~~v~---~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +   .+....+   |-.+  .++..+.+.+... -
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGD--EALHEALVELAVRRF   83 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999988888888899 8999999988765543 2   2332222   2222  1222222222211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        84 g~iD~lvnnAg   94 (280)
T 3tox_A           84 GGLDTAFNNAG   94 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            16999999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.34  E-value=0.028  Score=48.57  Aligned_cols=76  Identities=18%  Similarity=0.209  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-c-CCcEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F-GMTDF-INPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l-g~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ . +...+ .|-.+   .+..+.+.+  .-.++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~--~~~~id~   79 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WDATEKALG--GIGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHT--TCCCCSE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCC---HHHHHHHHH--HcCCCCE
Confidence            5689999998 9999988888888899 89999998877654432 2 33322 23322   222222222  1125899


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      +|++.|
T Consensus        80 vi~~Ag   85 (244)
T 1cyd_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.34  E-value=0.031  Score=51.80  Aligned_cols=96  Identities=15%  Similarity=0.156  Sum_probs=67.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC----hhh---------HHHhhhcCCcEEeCCCCCCcccHHHHH
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN----PWK---------KEKGKAFGMTDFINPDDEPNKSISELV  254 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~----~~~---------~~~~~~lg~~~v~~~~~~~~~~~~~~i  254 (375)
                      --++.+|+|+|+|..|..+++++..+|+++|+.++++    .+|         ..++++...  .  ...   .++.+.+
T Consensus       189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~--~--~~~---~~L~eav  261 (388)
T 1vl6_A          189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP--E--RLS---GDLETAL  261 (388)
T ss_dssp             CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT--T--CCC---SCHHHHH
T ss_pred             CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc--c--Cch---hhHHHHH
Confidence            3467899999999999999999999999899999988    555         233333221  0  111   3455555


Q ss_pred             HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +      ++|++|-+++..-.-++.++.++++ ..++.++.+.
T Consensus       262 ~------~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt  297 (388)
T 1vl6_A          262 E------GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV  297 (388)
T ss_dssp             T------TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS
T ss_pred             c------cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC
Confidence            3      4799999987322235677888876 7777777665

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.34  E-value=0.012  Score=51.35  Aligned_cols=75  Identities=9%  Similarity=0.047  Sum_probs=51.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-c--CChhhHHHhh-hc-CCcEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-D--KNPWKKEKGK-AF-GMTDFINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~--~~~~~~~~~~-~l-g~~~v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      |+++||+|+ |++|...++.+...|+ +|+++ +  +++++.+.+. ++ +.+ +.+..+  -..+.+.+.+..+  ++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~--v~~~~~~~~~~~g--~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-ALAEQK--PERLVDATLQHGE--AID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCC--GGGHHHHHGGGSS--CEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHH--HHHHHHHHHHHcC--CCC
Confidence            467899988 9999998888888899 89999 6  8887766543 34 332 334333  2344444444332  699


Q ss_pred             EEEEccC
Q 017201          265 YCFECTG  271 (375)
Q Consensus       265 ~vid~~g  271 (375)
                      ++|++.|
T Consensus        75 ~lv~~Ag   81 (244)
T 1zmo_A           75 TIVSNDY   81 (244)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.34  E-value=0.019  Score=50.82  Aligned_cols=104  Identities=20%  Similarity=0.251  Sum_probs=61.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ..|+++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+    +..+....   .|-.+  .+++.+.+.+...
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  101 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD--PAAVRRLFATAEE  101 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            35789999988 9999987777777799 78776 4454444332    23343221   23333  1223332322211


Q ss_pred             -CCCccEEEEccCCh----------h---------------hHHHHHHhcccCCeEEEEEccC
Q 017201          260 -GMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       260 -~~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                       ..++|++|++.|..          +               ..+.++..++++ |+++.++..
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~  163 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS  163 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence             12699999999732          0               233455666776 899998744

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.33  E-value=0.014  Score=54.62  Aligned_cols=91  Identities=13%  Similarity=0.155  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+.++++|+..+        .++.+.+    .  ..|+|+.
T Consensus       189 l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~--------~~l~ell----~--~aDvV~l  253 (393)
T 2nac_A          189 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMY----P--VCDVVTL  253 (393)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHG----G--GCSEEEE
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec--------CCHHHHH----h--cCCEEEE
Confidence            367899999999999999999999999 99999988766666677776532        1232221    1  5799988


Q ss_pred             ccCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201          269 CTGVPS----LL-SEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g~  295 (375)
                      ++...+    .+ ...+..++++ ..++.++.
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ecCCchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            876321    23 4567788886 88888764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.33  E-value=0.015  Score=51.26  Aligned_cols=79  Identities=14%  Similarity=0.122  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC--CcEE-eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG--MTDF-INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg--~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++.  ...+ .|-.+  .+++.+.+.+... ..++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK--RASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC--HHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            4789999988 9999988888888899 9999999987765543 232  2221 23332  1233332322211 1169


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |++|++.|
T Consensus        88 D~lv~~Ag   95 (263)
T 3ak4_A           88 DLLCANAG   95 (263)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.32  E-value=0.0099  Score=51.89  Aligned_cols=80  Identities=19%  Similarity=0.294  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE--E--eCCCCCCcccHHHHHHhhcCCCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD--F--INPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~--v--~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++...  .  .|-.+  .+.+.+.+.+.....++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD--AEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC--HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC--HHHHHHHHHHHHhhCCC
Confidence            4689999988 9999988888888898 899999998776543 3333321  1  23333  12233333222111269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999999873

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.32  E-value=0.0093  Score=53.03  Aligned_cols=101  Identities=10%  Similarity=0.026  Sum_probs=68.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhhc-----CCc--EEeCCCCCCcccHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAF-----GMT--DFINPDDEPNKSISE  252 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~l-----g~~--~v~~~~~~~~~~~~~  252 (375)
                      +.....++++++||-+|+| .|..+..+++..  +. +|++++.+++..+.+++.     |.+  .++..+-      .+
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~------~~  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI------AD  173 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT------TT
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch------hc
Confidence            3455678999999999987 477888888874  45 999999999888777542     432  2222211      11


Q ss_pred             HHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEcc
Q 017201          253 LVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                          ......||+|+-....+ ..+..+.+.|+++ |+++....
T Consensus       174 ----~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          174 ----FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             ----CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             ----cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence                11223699998766544 4688999999997 99887753

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.32  E-value=0.0055  Score=56.92  Aligned_cols=134  Identities=17%  Similarity=0.164  Sum_probs=83.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEE-EcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH-GAAKIIG-IDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~-G~~~V~~-~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      -+|.|+|+|.+|...+..++.. ++ ++++ +++++++.+.++++|+. ++       .++.+.+.    ..++|+|+.+
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~-~~-------~~~~~ll~----~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLK-IY-------ESYEAVLA----DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCC-BC-------SCHHHHHH----CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCc-ee-------CCHHHHhc----CCCCCEEEEc
Confidence            3689999999998777777666 66 6665 47788887777777763 21       23433332    2379999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCCC-c-cccchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGVD-A-MVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      +....+.+.+..++..+  +-+++..+.. . .....+..+ -.+++.+.-.+  +.+....+..+.+++++|.+-
T Consensus        73 tp~~~h~~~~~~al~aG--khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  144 (359)
T 3e18_A           73 TPNDSHKELAISALEAG--KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ--NRRWDEDFLIIKEMFEQKTIG  144 (359)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHHTTTS
T ss_pred             CCcHHHHHHHHHHHHCC--CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eeccCHHHHHHHHHHHcCCCC
Confidence            98887888888998874  5555654432 0 001111111 12344433221  233345577888889888763

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.32  E-value=0.024  Score=51.98  Aligned_cols=88  Identities=19%  Similarity=0.340  Sum_probs=63.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++..|. +|++.++++++ +.++++|...         .++.+.+.      ..|+|+.
T Consensus       148 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~---------~~l~~~l~------~aDvVil  210 (334)
T 2dbq_A          148 VYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF---------KPLEDLLR------ESDFVVL  210 (334)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE---------CCHHHHHH------HCSEEEE
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc---------CCHHHHHh------hCCEEEE
Confidence            357799999999999999999999999 99999998877 5555666532         12322222      4799998


Q ss_pred             ccCChh----hH-HHHHHhcccCCeEEEEEc
Q 017201          269 CTGVPS----LL-SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g  294 (375)
                      ++....    .+ ...+..++++ ..++.++
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CCCCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            886542    22 3556778886 7777776

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.32  E-value=0.015  Score=50.26  Aligned_cols=80  Identities=16%  Similarity=0.155  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-----hcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-----AFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-----~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .++++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.     ..+....   .|-.+  .+++.+.+.+... 
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   77 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK--AESVEEFSKKVLER   77 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHCC-HHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC--HHHHHHHHHHHHHh
Confidence            3678999988 9999988888888899 8999999988765432     2333322   23333  1222222221111 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        78 ~g~id~li~~Ag~   90 (235)
T 3l77_A           78 FGDVDVVVANAGL   90 (235)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            1269999999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.31  E-value=0.012  Score=52.50  Aligned_cols=80  Identities=19%  Similarity=0.182  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE---eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF---INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++....   .|-.+  .++..+.+.+... -.++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS--AKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999988 9999988888888899 9999999988766543 3443221   23332  1233222322211 1169


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus       103 D~lv~nAg~  111 (277)
T 4dqx_A          103 DVLVNNAGF  111 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999883

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.31  E-value=0.017  Score=52.45  Aligned_cols=75  Identities=15%  Similarity=0.186  Sum_probs=50.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHhh-h----cCCc-EEeCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---PWKKEKGK-A----FGMT-DFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~---~~~~~~~~-~----lg~~-~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.|+++||+|+|++|.+++..+...|+++|+++.++   .++.+.+. +    ++.. .+++..+  .+++.+.+.    
T Consensus       152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~--~~~l~~~l~----  225 (315)
T 3tnl_A          152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED--HEQLRKEIA----  225 (315)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH----
T ss_pred             ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch--HHHHHhhhc----
Confidence            368899999999999998888888998889999998   66654432 2    2322 2333322  012222221    


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                        .+|+||++++
T Consensus       226 --~aDiIINaTp  235 (315)
T 3tnl_A          226 --ESVIFTNATG  235 (315)
T ss_dssp             --TCSEEEECSS
T ss_pred             --CCCEEEECcc
Confidence              5899999985

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.31  E-value=0.012  Score=51.68  Aligned_cols=80  Identities=15%  Similarity=0.212  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .|+++||+|+ |++|...++.+...|+ +|++++++.++.+.+ ++++... .  .|-.+  .+++.+.+.+... -.++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR--QDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999988 9999988887778899 899999998876554 3344322 1  23333  2233333332211 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        84 d~lv~~Ag~   92 (259)
T 4e6p_A           84 DILVNNAAL   92 (259)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.31  E-value=0.014  Score=51.92  Aligned_cols=80  Identities=13%  Similarity=0.131  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+  .+++.+.+.+... -
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ--PDQVRGMLDQMTGEL  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999988887778899 8999999887765442    233221 1  23333  2233333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus       108 g~iD~lvnnAg~  119 (276)
T 3r1i_A          108 GGIDIAVCNAGI  119 (276)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            169999999874

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.30  E-value=0.018  Score=53.21  Aligned_cols=88  Identities=18%  Similarity=0.245  Sum_probs=63.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++. +.+.+.+.|+..+        .++.+.+.      ..|+|+-+
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~--------~~l~ell~------~aDiV~l~  222 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA--------ESKDALFE------QSDVLSVH  222 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC--------SSHHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe--------CCHHHHHh------hCCEEEEe
Confidence            57899999999999999999999999 999999775 3355566776432        12333332      47898887


Q ss_pred             cCChh----h-HHHHHHhcccCCeEEEEEc
Q 017201          270 TGVPS----L-LSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       270 ~g~~~----~-~~~~~~~l~~~~G~iv~~g  294 (375)
                      +...+    . -...+..++++ ..++.++
T Consensus       223 ~Plt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          223 LRLNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             ccCcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            75321    1 23567788887 8888887

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.30  E-value=0.011  Score=51.71  Aligned_cols=80  Identities=15%  Similarity=0.149  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----c--C-C-cEE--eCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----F--G-M-TDF--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----l--g-~-~~v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .  + . ..+  .|-.+  .++..+.+.+..
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   82 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD--CTKADTEIKDIH   82 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC--HHHHHHHHHHHH
Confidence            4688999988 9999988777777899 99999999887655432    1  2 1 111  23333  123333332221


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . ..++|++|++.|.
T Consensus        83 ~~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           83 QKYGAVDILVNAAAM   97 (250)
T ss_dssp             HHHCCEEEEEECCCC
T ss_pred             HhcCCCCEEEECCCc
Confidence            1 1269999999974

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.29  E-value=0.013  Score=51.39  Aligned_cols=80  Identities=18%  Similarity=0.204  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcCC-CCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITHG-MGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~-~g~  263 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .  .|-.+  .+++.+.+.+.... .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4788999988 9999998888888899 999999998776544 3344322 1  23332  12333333322211 169


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        81 D~lv~nAg~   89 (254)
T 1hdc_A           81 DGLVNNAGI   89 (254)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.29  E-value=0.0099  Score=52.64  Aligned_cols=80  Identities=24%  Similarity=0.253  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF---INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++....   .|-.+  .+++.+.+.+... ..++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSD--RKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS--HHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999988 9999998888888899 999999998876654 34554322   23322  1223222222211 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus       103 D~lvnnAg~  111 (266)
T 3grp_A          103 DILVNNAGI  111 (266)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.28  E-value=0.0087  Score=51.94  Aligned_cols=79  Identities=22%  Similarity=0.260  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC--CCeEEEEcCChhhHHHhhhc-CCcE-E--eCCCCCCcccHHHHHHhh---cC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNPWKKEKGKAF-GMTD-F--INPDDEPNKSISELVKGI---TH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G--~~~V~~~~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~~i~~~---~~  259 (375)
                      .+.+|||+|+ |.+|...++.+...|  + +|+++++++++.+.++++ +... +  .|-.+  .+.+.+.+.+.   .+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCC--HHHHHHHHHHHHHhcC
Confidence            3578999988 999998888887888  7 999999998877666554 2221 1  23322  12222222222   22


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      ..++|++|++.|
T Consensus        79 ~~~id~li~~Ag   90 (250)
T 1yo6_A           79 SDGLSLLINNAG   90 (250)
T ss_dssp             GGCCCEEEECCC
T ss_pred             CCCCcEEEECCc
Confidence            126999999986

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.28  E-value=0.013  Score=51.18  Aligned_cols=80  Identities=21%  Similarity=0.223  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+++.+.+.+... -
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD--PESAKAMADRTLAEF   84 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999988888888899 8999999988765543    223322 1  23322  1222222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        85 g~id~li~~Ag~   96 (253)
T 3qiv_A           85 GGIDYLVNNAAI   96 (253)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            169999999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.27  E-value=0.013  Score=52.97  Aligned_cols=81  Identities=20%  Similarity=0.243  Sum_probs=52.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      -.|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+...   ..|-.+  .+++.+.+.+... 
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH--LDEMVRLADEAFRL  105 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence            46789999998 9999988888888899 8999999988765542    233322   123333  1223333322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus       106 ~g~id~lvnnAg~  118 (301)
T 3tjr_A          106 LGGVDVVFSNAGI  118 (301)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCc
Confidence            1269999999883

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.27  E-value=0.016  Score=51.27  Aligned_cols=77  Identities=16%  Similarity=0.098  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hc--CCcE---EeCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AF--GMTD---FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~l--g~~~---v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.  +...   ..|-.+   .+..+.+.+.. 
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT---EQGCQDVIEKY-   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS---HHHHHHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC---HHHHHHHHHhc-
Confidence            4788999988 9999988887778899 9999999987764432    22  2211   123332   33333333322 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      + ++|++|++.|.
T Consensus        84 g-~id~lv~nAg~   95 (267)
T 3t4x_A           84 P-KVDILINNLGI   95 (267)
T ss_dssp             C-CCSEEEECCCC
T ss_pred             C-CCCEEEECCCC
Confidence            2 69999999873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.27  E-value=0.0061  Score=53.32  Aligned_cols=165  Identities=16%  Similarity=0.110  Sum_probs=93.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHhhhcCCcEE---eCCCCCCcccHHHHHHhhcCCCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTDF---INPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      .|+++||+|+ +++|.+.++.....|+ +|+.++++.+  ..+.+++.|....   .|-.+   +..   +++.....++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d---~~~---v~~~~~~g~i   80 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD---PLA---AKDSFTDAGF   80 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS---TTT---TTTSSTTTCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC---HHH---HHHHHHhCCC
Confidence            5889999988 9999998888889999 8999998753  3455566665332   23222   111   2222222379


Q ss_pred             cEEEEccCChh-------------------------hHHHHHHhc-cc-CCeEEEEEccCCC-ccc-cch----------
Q 017201          264 DYCFECTGVPS-------------------------LLSEALETT-KV-GKGKVIVIGVGVD-AMV-PLN----------  304 (375)
Q Consensus       264 d~vid~~g~~~-------------------------~~~~~~~~l-~~-~~G~iv~~g~~~~-~~~-~~~----------  304 (375)
                      |+++++.|...                         ..+.++..+ .. .+|+|+.++.... ... ...          
T Consensus        81 DiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~  160 (247)
T 4hp8_A           81 DILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVA  160 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHH
Confidence            99999997421                         223344444 22 1389999975432 111 000          


Q ss_pred             ------HHHhhcCCceEEEEeeccccCCCCHH------HHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCCC
Q 017201          305 ------VIALACGGRTLKGTTFGGIKTKSDLP------TLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  367 (375)
Q Consensus       305 ------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  367 (375)
                            ..++-.+++++.....+...++ ..+      ...+.+.+ .++...    .-.-+|+..+.-++.+.+
T Consensus       161 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~-~~~~~~~~~~~~~~~~~-~~PlgR----~g~peeiA~~v~fLaSd~  229 (247)
T 4hp8_A          161 GLTKLLANEWAAKGINVNAIAPGYIETN-NTEALRADAARNKAILE-RIPAGR----WGHSEDIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCSG-GGHHHHTSHHHHHHHHT-TCTTSS----CBCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHhhcCeEEEEEeeCCCCCc-chhhcccCHHHHHHHHh-CCCCCC----CcCHHHHHHHHHHHhCch
Confidence                  1113347888888876655332 111      11122221 222221    223578888888886643

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.27  E-value=0.017  Score=52.38  Aligned_cols=42  Identities=19%  Similarity=0.237  Sum_probs=35.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC---hhhHHH
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---PWKKEK  230 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~---~~~~~~  230 (375)
                      -.++++||+|+|++|.+++..+...|+++|+++.++   .+|.+.
T Consensus       146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~  190 (312)
T 3t4e_A          146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVA  190 (312)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHH
T ss_pred             cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHH
Confidence            368899999999999999888888999889999999   555543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.26  E-value=0.013  Score=51.67  Aligned_cols=79  Identities=20%  Similarity=0.170  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc-----CCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----GMTD-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +... .  .|-.+  .+++.+.+.+...
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   88 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   88 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4789999988 9999988887777899 9999999987765432 11     3322 1  23333  1233333332211


Q ss_pred             -CCCccEEEEccC
Q 017201          260 -GMGVDYCFECTG  271 (375)
Q Consensus       260 -~~g~d~vid~~g  271 (375)
                       -.++|++|++.|
T Consensus        89 ~~g~id~lv~nAg  101 (267)
T 1iy8_A           89 RFGRIDGFFNNAG  101 (267)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence             116999999987

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.26  E-value=0.031  Score=49.23  Aligned_cols=80  Identities=20%  Similarity=0.249  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc-----CCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----GMTD-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +... .  .|-.+  .+++.+.+.+...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   82 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC--HHHHHHHHHHHHH
Confidence            4789999998 9999988888888899 9999999887654321 11     2111 1  23332  1233333322211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -.++|++|++.|.
T Consensus        83 ~~g~id~lv~~Ag~   96 (267)
T 2gdz_A           83 HFGRLDILVNNAGV   96 (267)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence             1258999999974

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.26  E-value=0.013  Score=51.74  Aligned_cols=81  Identities=15%  Similarity=0.307  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-h----hcCCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K----AFGMTD-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +    +.+... .  .|-.+  .+++.+.+.+...
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   95 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKE   95 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            35789999988 9999988888888899 899999988776533 2    224322 1  23333  1233333322211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -.++|++|++.|.
T Consensus        96 ~~g~iD~lvnnAg~  109 (267)
T 1vl8_A           96 KFGKLDTVVNAAGI  109 (267)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence             1169999999873

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.26  E-value=0.01  Score=52.56  Aligned_cols=80  Identities=20%  Similarity=0.255  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF---INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+....   .|-.+  .+++.+.+.+... .
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999988 9999988888888899 8999999988765442    2343321   23333  1233333322211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        80 g~iD~lVnnAG~   91 (264)
T 3tfo_A           80 GRIDVLVNNAGV   91 (264)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.25  E-value=0.014  Score=50.90  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+  .+++.+.+.+... -
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD--RQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4689999988 9999988888888899 8999999987765432    224322 1  23333  1233333322211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        83 g~id~lv~nAg   93 (247)
T 2jah_A           83 GGLDILVNNAG   93 (247)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999987

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.25  E-value=0.023  Score=48.30  Aligned_cols=97  Identities=12%  Similarity=0.133  Sum_probs=60.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+.+  .+.. ++..+-   .+..+.+.+...  ++|+||++.+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~-~~~~D~---~d~~~~~~~~~~--~~d~vi~~ag   72 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNVK-AVHFDV---DWTPEEMAKQLH--GMDAIINVSG   72 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTEE-EEECCT---TSCHHHHHTTTT--TCSEEEECCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCce-EEEecc---cCCHHHHHHHHc--CCCEEEECCc
Confidence            6999998 9999998888888898 999999998765433  2222 222211   221234444443  6999999998


Q ss_pred             Chh---------hHHHHHHhcccC-CeEEEEEccCCC
Q 017201          272 VPS---------LLSEALETTKVG-KGKVIVIGVGVD  298 (375)
Q Consensus       272 ~~~---------~~~~~~~~l~~~-~G~iv~~g~~~~  298 (375)
                      ...         .....++.+... .++++.++....
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           73 SGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             CTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             CCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence            532         122333333332 158888876543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.25  E-value=0.0097  Score=51.51  Aligned_cols=37  Identities=22%  Similarity=0.351  Sum_probs=31.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~   40 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQ   40 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCcccc
Confidence            568999988 9999988888888898 999999887654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.25  E-value=0.011  Score=54.49  Aligned_cols=81  Identities=22%  Similarity=0.256  Sum_probs=51.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-----------HHhhhcCCcEE---eCCCCCCcccHHHH
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-----------EKGKAFGMTDF---INPDDEPNKSISEL  253 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-----------~~~~~lg~~~v---~~~~~~~~~~~~~~  253 (375)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.           +.+++.+....   .|-.+  .+++.+.
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~  119 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD--EQQISAA  119 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHH
Confidence            35789999988 9999988887778899 899999887642           22334454322   23333  2233333


Q ss_pred             HHhhcCC-CCccEEEEccCC
Q 017201          254 VKGITHG-MGVDYCFECTGV  272 (375)
Q Consensus       254 i~~~~~~-~g~d~vid~~g~  272 (375)
                      +.+.... .++|++|++.|.
T Consensus       120 ~~~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            3322211 169999999984

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.23  E-value=0.017  Score=51.25  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcCC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITHG-  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~-  260 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+...   ..|-.+  .+++.+.+.+.... 
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4789999988 9999988888888899 899999998776543    2234322   123333  12233323222111 


Q ss_pred             -CCccEEEEccCC
Q 017201          261 -MGVDYCFECTGV  272 (375)
Q Consensus       261 -~g~d~vid~~g~  272 (375)
                       .++|++|++.|.
T Consensus        97 ~g~id~lv~nAg~  109 (273)
T 1ae1_A           97 DGKLNILVNNAGV  109 (273)
T ss_dssp             TSCCCEEEECCCC
T ss_pred             CCCCcEEEECCCC
Confidence             269999999874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.22  E-value=0.016  Score=50.15  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=49.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccEEE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDYCF  267 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~vi  267 (375)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++  ..++++...+ .|-.+   ++..+.+.+... -.++|++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEK---DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTT---SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCch---HHHHHHHHHHHHHcCCCCEEE
Confidence            578999988 9999998888888898 89999988776  2334453322 22222   233333222211 12699999


Q ss_pred             EccCC
Q 017201          268 ECTGV  272 (375)
Q Consensus       268 d~~g~  272 (375)
                      ++.|.
T Consensus        76 ~~Ag~   80 (239)
T 2ekp_A           76 HAAAV   80 (239)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.21  E-value=0.017  Score=50.68  Aligned_cols=79  Identities=16%  Similarity=0.214  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcCC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITHG-  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~-  260 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+++.+.+.+.... 
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   84 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4789999988 9999988887778899 9999999887765432    224322 1  23333  12333333322211 


Q ss_pred             -CCccEEEEccC
Q 017201          261 -MGVDYCFECTG  271 (375)
Q Consensus       261 -~g~d~vid~~g  271 (375)
                       .++|++|++.|
T Consensus        85 ~g~id~lv~~Ag   96 (260)
T 2ae2_A           85 HGKLNILVNNAG   96 (260)
T ss_dssp             TTCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             26999999987

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.20  E-value=0.025  Score=51.50  Aligned_cols=90  Identities=12%  Similarity=0.173  Sum_probs=65.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++ ++++ ..+.++|+.. .       .++.+.+.      ..|+|+
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~-------~~l~ell~------~aDvVi  207 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H-------DSLDSLLS------VSQFFS  207 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C-------SSHHHHHH------HCSEEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c-------CCHHHHHh------hCCEEE
Confidence            467899999999999999999999998 9999998 7766 3555677642 1       12333222      479999


Q ss_pred             EccCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201          268 ECTGVPS----LL-SEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       268 d~~g~~~----~~-~~~~~~l~~~~G~iv~~g~  295 (375)
                      .++...+    .+ ...+..++++ ..++.++.
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             EeccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            8886432    22 3466888887 88888875

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.19  E-value=0.026  Score=52.04  Aligned_cols=91  Identities=23%  Similarity=0.322  Sum_probs=64.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -.|.+|.|+|.|.+|...++.++ .+|+ +|++.++++++.+.+.++|...+   .     ++.+.+.      ..|+|+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~-----~l~ell~------~aDvVi  225 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---D-----SLEELAR------RSDCVS  225 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---S-----SHHHHHH------HCSEEE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---C-----CHHHHhc------cCCEEE
Confidence            46789999999999999999999 9999 99999988877666666676432   1     2322222      478998


Q ss_pred             EccCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201          268 ECTGVPS----LL-SEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       268 d~~g~~~----~~-~~~~~~l~~~~G~iv~~g~  295 (375)
                      .++...+    .+ ...+..++++ ..++.++.
T Consensus       226 l~vp~~~~t~~li~~~~l~~mk~g-ailin~sr  257 (348)
T 2w2k_A          226 VSVPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR  257 (348)
T ss_dssp             ECCCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             EeCCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence            8886432    22 3466778886 77776653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.19  E-value=0.011  Score=52.20  Aligned_cols=80  Identities=16%  Similarity=0.271  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cCCcE---EeCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTD---FINPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg~~~---v~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    + .+...   ..|-.+  .++..+.+.+... 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE--PDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--TTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999988888888899 8999999987765432    1 33322   123333  1233333322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus        96 ~g~id~lv~nAg~  108 (266)
T 4egf_A           96 FGGLDVLVNNAGI  108 (266)
T ss_dssp             HTSCSEEEEECCC
T ss_pred             cCCCCEEEECCCc
Confidence            1269999999873

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.18  E-value=0.013  Score=53.36  Aligned_cols=79  Identities=19%  Similarity=0.138  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC--cE---EeCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--TD---FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~--~~---v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+.    ..+.  ..   ..|-.+  .+.+.+.+.+...
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   83 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS--REGFKMAADEVEA   83 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999988777778899 8999999988765542    2232  11   123333  2233333333211


Q ss_pred             -CCCccEEEEccC
Q 017201          260 -GMGVDYCFECTG  271 (375)
Q Consensus       260 -~~g~d~vid~~g  271 (375)
                       ..++|++|++.|
T Consensus        84 ~~g~id~lv~nAg   96 (319)
T 3ioy_A           84 RFGPVSILCNNAG   96 (319)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hCCCCCEEEECCC
Confidence             126999999998

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.17  E-value=0.017  Score=52.33  Aligned_cols=101  Identities=17%  Similarity=0.186  Sum_probs=69.5

Q ss_pred             hhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHH
Q 017201          184 KEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVK  255 (375)
Q Consensus       184 ~~~~-~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~  255 (375)
                      +... ++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++..+-   .++     
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-----  179 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDT-----  179 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcC-----
Confidence            4444 78999999999974 7888888888787 99999999988877754    3422   2222111   110     


Q ss_pred             hhcCCCCccEEEEccC-----ChhhHHHHHHhcccCCeEEEEEccC
Q 017201          256 GITHGMGVDYCFECTG-----VPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .. ....||+|+....     -...+..+.++|+++ |+++.....
T Consensus       180 ~~-~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  223 (312)
T 3vc1_A          180 PF-DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITGC  223 (312)
T ss_dssp             CC-CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             CC-CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEcc
Confidence            01 2237999976432     235788999999997 999887533

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.17  E-value=0.012  Score=51.83  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+  .+++.+.+.+... .
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN--TDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4789999988 9999998888888899 8999999988776543    223222 1  23332  2233333322211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        82 g~id~lv~nAg   92 (257)
T 3imf_A           82 GRIDILINNAA   92 (257)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999998

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.16  E-value=0.027  Score=48.71  Aligned_cols=72  Identities=19%  Similarity=0.100  Sum_probs=48.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .+.+|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+ ..+...+ .|..+   .+   .+.+...  ++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d---~~---~~~~~~~--~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD---AD---SINPAFQ--GIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS---HH---HHHHHHT--TCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC---HH---HHHHHHc--CCCE
Confidence            4678999998 99999888877777  77 999999988776543 1223222 23322   22   2333322  5899


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      ||++.+
T Consensus        73 vi~~a~   78 (253)
T 1xq6_A           73 LVILTS   78 (253)
T ss_dssp             EEECCC
T ss_pred             EEEecc
Confidence            999886

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.16  E-value=0.022  Score=50.12  Aligned_cols=79  Identities=9%  Similarity=0.139  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+    ++.+... .  .|-.+  .++..+.+.+....
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   83 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN--AAEVEAAISAAADK   83 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999988887778899 88887 5555444332    3334322 1  23332  12333333322111


Q ss_pred             -CCccEEEEccC
Q 017201          261 -MGVDYCFECTG  271 (375)
Q Consensus       261 -~g~d~vid~~g  271 (375)
                       .++|++|++.|
T Consensus        84 ~g~id~lv~nAg   95 (259)
T 3edm_A           84 FGEIHGLVHVAG   95 (259)
T ss_dssp             HCSEEEEEECCC
T ss_pred             hCCCCEEEECCC
Confidence             16999999986

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.15  E-value=0.01  Score=52.21  Aligned_cols=80  Identities=19%  Similarity=0.242  Sum_probs=50.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcC---CCeEEEEcCChhhHHHhhhc---CCcE-E--eCCCCCCcccHHHHHHhh-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHG---AAKIIGIDKNPWKKEKGKAF---GMTD-F--INPDDEPNKSISELVKGI-  257 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G---~~~V~~~~~~~~~~~~~~~l---g~~~-v--~~~~~~~~~~~~~~i~~~-  257 (375)
                      ..+.++||+|+ |.+|...++.+...|   + +|+++++++++.+.++++   +... +  .|-.+  .+.+.+.+.+. 
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~   95 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIE   95 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC--hHHHHHHHHHHH
Confidence            45678999988 999998888777788   7 999999987765544332   2211 1  23332  23343333332 


Q ss_pred             --cCCCCccEEEEccC
Q 017201          258 --THGMGVDYCFECTG  271 (375)
Q Consensus       258 --~~~~g~d~vid~~g  271 (375)
                        .+..++|++|++.|
T Consensus        96 ~~~g~~~id~li~~Ag  111 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAG  111 (267)
T ss_dssp             HHHGGGCCSEEEECCC
T ss_pred             HhcCCCCccEEEECCC
Confidence              22125999999987

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.15  E-value=0.013  Score=51.91  Aligned_cols=80  Identities=14%  Similarity=0.130  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...   ..|-.+  .+++.+.+.+... -.++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN--EVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC--HHHHHHHHHHHHHHcCCC
Confidence            4789999988 9999988888888899 899999998876554 3444322   223333  1223322222211 1169


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        87 d~lv~nAg~   95 (271)
T 3tzq_B           87 DIVDNNAAH   95 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.15  E-value=0.016  Score=51.49  Aligned_cols=79  Identities=15%  Similarity=0.143  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  .+++.+.+.+... -
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERY   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            4689999988 9999988888888899 899999998776533    2234322 1  23332  1233333332211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        98 g~iD~lv~~Ag  108 (277)
T 2rhc_B           98 GPVDVLVNNAG  108 (277)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999987

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.15  E-value=0.0078  Score=51.52  Aligned_cols=101  Identities=13%  Similarity=0.190  Sum_probs=67.6

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHH
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVK  255 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~  255 (375)
                      .....++.+||-+|+| .|..++.+|+..  +. +|++++.+++..+.+++    .|..   .++.      .+..+.+.
T Consensus        53 l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~  124 (223)
T 3duw_A           53 LVQIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT------GLALDSLQ  124 (223)
T ss_dssp             HHHHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHH
T ss_pred             HHHhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHH
Confidence            3456788999999987 488888899887  45 99999999988877653    3432   2222      12333333


Q ss_pred             hhcCC--CCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHG--MGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~--~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .+...  ..||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       125 ~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  167 (223)
T 3duw_A          125 QIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDN  167 (223)
T ss_dssp             HHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEES
T ss_pred             HHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence            32211  369999854432   24678889999998 9777654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.14  E-value=0.015  Score=51.77  Aligned_cols=80  Identities=19%  Similarity=0.155  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+  .++..+.+.+.....
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE--AGAGTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS--TTHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            5789999988 9999988888888899 9999999887755432    234322 1  23332  123333222221113


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.14  E-value=0.022  Score=49.99  Aligned_cols=78  Identities=14%  Similarity=0.135  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhc---
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGIT---  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~---  258 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+  .+++.+.+.+..   
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ--ESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC--HHHHHHHHHHHHHhc
Confidence            4678999988 9999988888888898 8999999887765432    224322 1  23332  223333333331   


Q ss_pred             CCCCccEEEEccC
Q 017201          259 HGMGVDYCFECTG  271 (375)
Q Consensus       259 ~~~g~d~vid~~g  271 (375)
                      .+ .+|++|++.|
T Consensus        81 ~g-~id~lvnnAg   92 (260)
T 2qq5_A           81 QG-RLDVLVNNAY   92 (260)
T ss_dssp             TT-CCCEEEECCC
T ss_pred             CC-CceEEEECCc
Confidence            23 6999999994

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.14  E-value=0.011  Score=52.00  Aligned_cols=80  Identities=19%  Similarity=0.257  Sum_probs=46.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .|+++||+|+ +++|...++.+...|+ +|+++++++++.+.+ ++++... +  .|-.+  .++..+.+.+... -.++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN--EADATAALAFAKQEFGHV   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999988 9999988888888899 899999988776543 3343321 1  23322  1233333322211 1169


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        83 d~lv~nAg~   91 (257)
T 3tpc_A           83 HGLVNCAGT   91 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.14  E-value=0.018  Score=50.79  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++... .  .|-.+  .+++.+.+.+... -..+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence            4688999988 9999988888888899 9999999988766543 343221 1  23333  1233333322211 1258


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        82 D~lvnnAg~   90 (263)
T 2a4k_A           82 HGVAHFAGV   90 (263)
T ss_dssp             CEEEEGGGG
T ss_pred             cEEEECCCC
Confidence            999999873

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.14  E-value=0.037  Score=50.29  Aligned_cols=91  Identities=20%  Similarity=0.245  Sum_probs=63.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhcCCc-EEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .+|.|+|+|.+|...++.++..|.. +|++.++++++.+.++++|.. ......+    ++      ..  .+.|+||.|
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~----~~------~~--~~aDvVila  101 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA----KV------ED--FSPDFVMLS  101 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT----GG------GG--GCCSEEEEC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH----HH------hh--ccCCEEEEe
Confidence            6899999999999888888888863 799999999999988888863 2222111    10      01  268999999


Q ss_pred             cCChh---hHHHHHHhcccCCeEEEEEcc
Q 017201          270 TGVPS---LLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       270 ~g~~~---~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +....   .+......++++ ..++.++.
T Consensus       102 vp~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          102 SPVRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             SCGGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CCHHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            97652   334445566775 66666653

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.13  E-value=0.015  Score=53.15  Aligned_cols=90  Identities=21%  Similarity=0.370  Sum_probs=64.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+.+..+|+...         ++.+.+.      ..|+|+-+
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---------~l~ell~------~aDvV~l~  207 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQV---------ACSELFA------SSDFILLA  207 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEEC---------CHHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeC---------CHHHHHh------hCCEEEEc
Confidence            57899999999999999999999999 99999988766666666675321         2322222      36888887


Q ss_pred             cCChh----hH-HHHHHhcccCCeEEEEEccC
Q 017201          270 TGVPS----LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g~~~----~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +...+    .+ ...+..++++ ..++.++..
T Consensus       208 ~P~t~~t~~li~~~~l~~mk~g-ailIN~arg  238 (330)
T 4e5n_A          208 LPLNADTLHLVNAELLALVRPG-ALLVNPCRG  238 (330)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-EEEEECSCG
T ss_pred             CCCCHHHHHHhCHHHHhhCCCC-cEEEECCCC
Confidence            75321    12 3567778886 888777643

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.13  E-value=0.036  Score=49.51  Aligned_cols=86  Identities=22%  Similarity=0.212  Sum_probs=58.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+.      +.|+||-++..
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~------~advvi~~v~~   67 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA--------SSPAEVCA------ACDITIAMLAD   67 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC--------SCHHHHHH------HCSEEEECCSS
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHH------cCCEEEEEcCC
Confidence            68899999999976666667788 89999999999888877775421        12333222      46888888877


Q ss_pred             hhhHHHHH-------HhcccCCeEEEEEc
Q 017201          273 PSLLSEAL-------ETTKVGKGKVIVIG  294 (375)
Q Consensus       273 ~~~~~~~~-------~~l~~~~G~iv~~g  294 (375)
                      +..+...+       ..+.++ ..++.++
T Consensus        68 ~~~~~~v~~~~~~l~~~l~~g-~~vv~~s   95 (287)
T 3pdu_A           68 PAAAREVCFGANGVLEGIGGG-RGYIDMS   95 (287)
T ss_dssp             HHHHHHHHHSTTCGGGTCCTT-CEEEECS
T ss_pred             HHHHHHHHcCchhhhhcccCC-CEEEECC
Confidence            64445444       334554 5555544

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.12  E-value=0.018  Score=50.74  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+++.+.+.+... -
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            4789999988 9999998888888899 8999999887765432    224322 1  23333  1233222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        83 g~id~lv~nAg~   94 (262)
T 1zem_A           83 GKIDFLFNNAGY   94 (262)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            169999999873

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.11  E-value=0.019  Score=51.04  Aligned_cols=79  Identities=19%  Similarity=0.207  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh---cCCcE-E--eCCCCCCcccHHHHHHh-hcCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD-F--INPDDEPNKSISELVKG-ITHGM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~~i~~-~~~~~  261 (375)
                      .|.++||+|+ |++|.+.++.+...|+ +|++++++++..+.+++   .+... .  .|-.+   .+-.+.+.+ .....
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLAD---LEGAANVAEELAATR  105 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTC---HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCC---HHHHHHHHHHHHhcC
Confidence            5789999988 9999988888778899 89999866544333332   33322 1  23333   222222222 11112


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus       106 ~iD~lv~nAg~  116 (273)
T 3uf0_A          106 RVDVLVNNAGI  116 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            69999999874

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=96.11  E-value=0.028  Score=45.50  Aligned_cols=102  Identities=19%  Similarity=0.148  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .++++++||-+|+|. |..+..+++..|. .++++++.++ ..+.    .-..++..+- ......+.+........+|+
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~-~~~~~~~~~~~~~~~~~~D~   91 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDF-RDELVMKALLERVGDSKVQV   91 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCT-TSHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEccc-ccchhhhhhhccCCCCceeE
Confidence            378899999999976 8888888888642 3999999887 3322    1112222111 01222222333233347999


Q ss_pred             EEEcc-----CC------------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          266 CFECT-----GV------------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       266 vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      |+...     +.            ...+..+.++|+++ |.++.....
T Consensus        92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  138 (180)
T 1ej0_A           92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQ  138 (180)
T ss_dssp             EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            98732     22            24678889999997 998876543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.11  E-value=0.016  Score=51.56  Aligned_cols=81  Identities=12%  Similarity=0.164  Sum_probs=50.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      ..++++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+....   .|-.+  .+++.+.+.+... 
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   98 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS--TDEVHAAVAAAVER   98 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            46789999988 9999988877777899 899999998876543    23343321   23332  1233232322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        99 ~g~id~lv~nAg~  111 (279)
T 3sju_A           99 FGPIGILVNSAGR  111 (279)
T ss_dssp             HCSCCEEEECCCC
T ss_pred             cCCCcEEEECCCC
Confidence            1269999999874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.10  E-value=0.018  Score=51.03  Aligned_cols=80  Identities=19%  Similarity=0.153  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  .+++.+.+.+... -
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAEI  106 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC--HHHHHHHHHHHHHHC
Confidence            5689999998 9999988888888898 899999988776543    2234322 1  23332  1233333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus       107 g~iD~li~~Ag~  118 (272)
T 1yb1_A          107 GDVSILVNNAGV  118 (272)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            269999999873

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.10  E-value=0.023  Score=54.19  Aligned_cols=104  Identities=14%  Similarity=0.144  Sum_probs=70.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHH-cCC--CeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARM-HGA--AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~-~G~--~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      .+....+|||+|+|+||..++.++.. .+.  ..|++++..+.+.+..+.+|.......-+  ..+..+.+.++..+ + 
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vd--adnv~~~l~aLl~~-~-   84 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQIT--PQNYLEVIGSTLEE-N-   84 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCC--TTTHHHHTGGGCCT-T-
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEecc--chhHHHHHHHHhcC-C-
Confidence            45566789999999999988776654 455  26888887777666666667543322211  24455556555554 4 


Q ss_pred             cEEEEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          264 DYCFECTGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      |+||+++-....+..+-.|+..+ -.++.+..
T Consensus        85 DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            99999886655677777888886 77777763

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.10  E-value=0.018  Score=51.01  Aligned_cols=80  Identities=20%  Similarity=0.206  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE--eCCCCCCcccHHHHHHhhcC-CCCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF--INPDDEPNKSISELVKGITH-GMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v--~~~~~~~~~~~~~~i~~~~~-~~g~d  264 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++.....  .|-.+  .+++.+.+.+... -.++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD   84 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRLD   84 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC--HHHHHHHHHHHHHHcCCCC
Confidence            5789999988 9999988888888899 8999999988765543 3322122  23332  1233332222211 11699


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      ++|++.|.
T Consensus        85 ~lv~nAg~   92 (270)
T 1yde_A           85 CVVNNAGH   92 (270)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999863

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.09  E-value=0.014  Score=51.26  Aligned_cols=80  Identities=15%  Similarity=0.106  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE---eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF---INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+....   .|-.+  .++..+.+.+... .
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD--EQHREAVIKAALDQF   87 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999987777777899 8999999887765432    3343221   23332  1223222222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        88 g~id~lv~nAg~   99 (256)
T 3gaf_A           88 GKITVLVNNAGG   99 (256)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.09  E-value=0.025  Score=47.34  Aligned_cols=96  Identities=16%  Similarity=0.147  Sum_probs=58.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .+|||+|+ |.+|...++.+...|+ +|+++++++++.+.....+...+ .|..+   .+   .+.+...  ++|+||++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~~---~~---~~~~~~~--~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ---AA---DVDKTVA--GQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS---HH---HHHHHHT--TCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEEEEecCCC---HH---HHHHHHc--CCCEEEEC
Confidence            68999998 9999998888888898 99999998876543222233322 23222   22   2223222  58999999


Q ss_pred             cCChh----------hHHHHHHhccc-CCeEEEEEccC
Q 017201          270 TGVPS----------LLSEALETTKV-GKGKVIVIGVG  296 (375)
Q Consensus       270 ~g~~~----------~~~~~~~~l~~-~~G~iv~~g~~  296 (375)
                      .+...          .....++.+.. +-++++.++..
T Consensus        75 a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            87432          12233333332 11578877644

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.08  E-value=0.017  Score=51.51  Aligned_cols=80  Identities=16%  Similarity=0.137  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE---eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF---INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++....   .|-.+  .++..+.+.+... ..++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS--LQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHHHHHhcCCC
Confidence            4789999988 9999988888888899 9999999988876543 3443221   23332  1223322322211 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        81 D~lvnnAg~   89 (281)
T 3zv4_A           81 DTLIPNAGI   89 (281)
T ss_dssp             CEEECCCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.08  E-value=0.012  Score=51.46  Aligned_cols=80  Identities=25%  Similarity=0.316  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCc---EEeCCCCCCcccHHHHHHhhcCC-CCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT---DFINPDDEPNKSISELVKGITHG-MGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~---~v~~~~~~~~~~~~~~i~~~~~~-~g~  263 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. .++..   ...|-.+  .++..+.+.+.... .++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999988 9999988888888899 9999999988766543 23321   1223333  22333333322111 169


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.08  E-value=0.026  Score=48.75  Aligned_cols=95  Identities=17%  Similarity=0.094  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .++++.+||-+|+|. |..+..+++. |+ +|++++.+++..+.+++. . .++.      .+..+.+..+.++ .||+|
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~-~~~~------~d~~~~~~~~~~~-~fD~i  105 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-F-NVVK------SDAIEYLKSLPDK-YLDGV  105 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-S-EEEC------SCHHHHHHTSCTT-CBSEE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-c-ceee------ccHHHHhhhcCCC-CeeEE
Confidence            357889999999863 5566666665 77 899999999998888766 2 2222      2333333333333 79999


Q ss_pred             EEccC-----C---hhhHHHHHHhcccCCeEEEEEc
Q 017201          267 FECTG-----V---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       267 id~~g-----~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +....     .   ...+..+.++|+++ |.++...
T Consensus       106 ~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  140 (240)
T 3dli_A          106 MISHFVEHLDPERLFELLSLCYSKMKYS-SYIVIES  140 (240)
T ss_dssp             EEESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEE
T ss_pred             EECCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence            86432     1   24678899999998 9887654

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.08  E-value=0.032  Score=50.92  Aligned_cols=132  Identities=14%  Similarity=0.186  Sum_probs=76.8

Q ss_pred             EEEEECCCHHHHHH-H-HHHHHcCCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGLGA-V-DGARMHGAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~~a-i-~la~~~G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|... + .+.+ .+. +++ ++++++++.+. ++++|...++       .++.+.+    ...++|+|+.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~-~~vav~d~~~~~~~~~~~~~g~~~~~-------~~~~~~l----~~~~~D~V~i   68 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGG-EVVSMMSTSAERGAAYATENGIGKSV-------TSVEELV----GDPDVDAVYV   68 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTC-EEEEEECSCHHHHHHHHHHTTCSCCB-------SCHHHHH----TCTTCCEEEE
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCC-eEEEEECCCHHHHHHHHHHcCCCccc-------CCHHHHh----cCCCCCEEEE
Confidence            68899999999865 5 4455 677 665 56777777654 4556753222       2333322    2236999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-cccc-chHHHhh-cCCceEEEEeeccccCCCCHHHHHHHHHcCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  341 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (375)
                      ++....+.+.+..++..+  +-+.+..+.. .... ..+..+. .+++.+.-..  ..+....+..+.+++++|.+
T Consensus        69 ~tp~~~h~~~~~~al~~G--k~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~--~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           69 STTNELHREQTLAAIRAG--KHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNH--HLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--CGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChhHhHHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEee--hhhcCHHHHHHHHHHHcCCC
Confidence            998876778888888874  4455554321 0000 1111111 2344433221  22233456778888988876

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.07  E-value=0.016  Score=50.94  Aligned_cols=79  Identities=22%  Similarity=0.283  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHhh-hc----CCcE-Ee--CCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGK-AF----GMTD-FI--NPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-~~~~~-~l----g~~~-v~--~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++ .+.+. ++    +... .+  |-.+  .+++.+.+.+...
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   79 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            4678999988 9999988888888899 89999988776 44332 22    4322 22  3222  1223233322211


Q ss_pred             -CCCccEEEEccC
Q 017201          260 -GMGVDYCFECTG  271 (375)
Q Consensus       260 -~~g~d~vid~~g  271 (375)
                       -.++|++|++.|
T Consensus        80 ~~g~iD~lv~~Ag   92 (260)
T 1x1t_A           80 QMGRIDILVNNAG   92 (260)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence             126999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.07  E-value=0.0086  Score=53.49  Aligned_cols=80  Identities=15%  Similarity=0.173  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc---CC-c-EE--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF---GM-T-DF--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l---g~-~-~v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++   +. . ..  .|-.+  .+++.+.+.+... 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  108 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD--PDQVAALFAAVRAE  108 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            6789999988 9999988888778899 9999999988765442 22   21 1 22  23333  2233332322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus       109 ~g~iD~lvnnAG~  121 (281)
T 4dry_A          109 FARLDLLVNNAGS  121 (281)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1269999999874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.07  E-value=0.019  Score=51.28  Aligned_cols=80  Identities=11%  Similarity=0.135  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      ++.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+  .+++.+.+.+... .
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD--ELQMRNAVRDLVLKF  103 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5789999988 9999988888888899 9999999987765443    223322 1  23332  2233333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus       104 g~iD~lVnnAg~  115 (283)
T 3v8b_A          104 GHLDIVVANAGI  115 (283)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.06  E-value=0.014  Score=52.42  Aligned_cols=80  Identities=18%  Similarity=0.188  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC-c-EE--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM-T-DF--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~-~-~v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+. . .+  .|-.+  .+++.+.+.+... 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD--PGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999988888888899 9999999987765432    2331 1 11  23333  1222222222211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus       117 ~g~iD~lvnnAg~  129 (293)
T 3rih_A          117 FGALDVVCANAGI  129 (293)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1269999999873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.06  E-value=0.025  Score=50.30  Aligned_cols=79  Identities=15%  Similarity=0.183  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc---CCcEEe--CCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF---GMTDFI--NPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l---g~~~v~--~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++   +-..++  |-.+  .+++.+.+.+... ..
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSS--EAGARRLAQALGELSA  104 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTS--HHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCC--HHHHHHHHHHHHHhcC
Confidence            4689999998 9999988888888899 8999999887765432 22   311111  2222  1223222222211 12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      ++|++|++.|
T Consensus       105 ~iD~lvnnAg  114 (276)
T 2b4q_A          105 RLDILVNNAG  114 (276)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.06  E-value=0.014  Score=51.49  Aligned_cols=81  Identities=17%  Similarity=0.181  Sum_probs=52.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      -.+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+++.+.+.+... 
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH--SDAIAAFATGVLAA  103 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence            46789999988 9999988877777899 8999999988765442    234322 1  23333  1223332322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ...+|++|++.|.
T Consensus       104 ~g~id~lv~~Ag~  116 (262)
T 3rkr_A          104 HGRCDVLVNNAGV  116 (262)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1269999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.05  E-value=0.025  Score=50.29  Aligned_cols=77  Identities=19%  Similarity=0.229  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++... +  .|-.+  .+++.+.+.+...-.++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTS--EDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHTTSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHhCCCC
Confidence            5789999988 9999988877778899 8999999988876543 444322 1  23333  233333444432223689


Q ss_pred             EEEEc
Q 017201          265 YCFEC  269 (375)
Q Consensus       265 ~vid~  269 (375)
                      ++|.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99988

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.05  E-value=0.019  Score=50.68  Aligned_cols=81  Identities=15%  Similarity=0.113  Sum_probs=52.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      -.|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.    +.+... .  .|-.+  .+++.+.+.+... 
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD--DAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            46789999988 9999988887778899 8999999988765442    234322 1  23333  2233333332211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus        86 ~g~id~lv~nAg~   98 (264)
T 3ucx_A           86 YGRVDVVINNAFR   98 (264)
T ss_dssp             TSCCSEEEECCCS
T ss_pred             cCCCcEEEECCCC
Confidence            1269999999864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.04  E-value=0.015  Score=51.30  Aligned_cols=79  Identities=19%  Similarity=0.171  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcC-CcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFG-MTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg-~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+ ... .  .|-.+  .+++.+.+.+... 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD--RAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999988888888899 999999998876543    2233 111 1  23332  1223222222211 


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      -.++|++|++.|
T Consensus        86 ~g~id~lvnnAg   97 (262)
T 3pk0_A           86 FGGIDVVCANAG   97 (262)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCCEEEECCC
Confidence            116999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.04  E-value=0.014  Score=50.59  Aligned_cols=80  Identities=18%  Similarity=0.234  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-----cCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----FGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+     .+... +  .|-.+  .+++.+.+.+... 
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS--EESINKAFEEIYNL   82 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence            4678999988 9999988888778898 99999998877654322     23322 1  23332  2233333332211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        83 ~~~~d~vi~~Ag~   95 (248)
T 2pnf_A           83 VDGIDILVNNAGI   95 (248)
T ss_dssp             SSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1269999999873

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.04  E-value=0.016  Score=51.78  Aligned_cols=80  Identities=16%  Similarity=0.235  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-------H----HHhhhcCCcEE---eCCCCCCcccHHHHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-------K----EKGKAFGMTDF---INPDDEPNKSISELV  254 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-------~----~~~~~lg~~~v---~~~~~~~~~~~~~~i  254 (375)
                      .++++||+|+ +++|...++.+...|+ +|+.+++++++       .    +.+++.+....   .|-.+  .++..+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   84 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD--GDAVAAAV   84 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS--HHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHH
Confidence            4789999988 9999988887778899 99999988763       1    22233444321   23333  12232223


Q ss_pred             HhhcC-CCCccEEEEccCC
Q 017201          255 KGITH-GMGVDYCFECTGV  272 (375)
Q Consensus       255 ~~~~~-~~g~d~vid~~g~  272 (375)
                      .+... ..++|++|++.|.
T Consensus        85 ~~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            22211 1169999999873

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.03  E-value=0.0088  Score=51.20  Aligned_cols=102  Identities=17%  Similarity=0.171  Sum_probs=68.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~  256 (375)
                      .....++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .+..   .++.      .+..+.+..
T Consensus        59 l~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~  131 (225)
T 3tr6_A           59 LVKLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL------SPAKDTLAE  131 (225)
T ss_dssp             HHHHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HHHhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe------CCHHHHHHH
Confidence            33456889999999874 888889998764 3499999999988877654    3432   1222      223333333


Q ss_pred             hcCC---CCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          257 ITHG---MGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~~~---~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ....   ..||+|+-....   ...++.+.++|+++ |.++.-.
T Consensus       132 ~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  174 (225)
T 3tr6_A          132 LIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDN  174 (225)
T ss_dssp             HHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             hhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence            3321   379999854432   23578889999997 9888654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.03  E-value=0.007  Score=54.85  Aligned_cols=116  Identities=16%  Similarity=0.131  Sum_probs=71.9

Q ss_pred             cccccchhhhhhhhhhh--------cC-CCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCChhhH-HHhhhcCCc
Q 017201          169 SFLSCGFTTGYGAAWKE--------AK-VEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMT  237 (375)
Q Consensus       169 a~l~~~~~ta~~~l~~~--------~~-~~~g~~VlI~Gag-~~G~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lg~~  237 (375)
                      ..+||+...+...+.+.        .+ --.|.+++|+|+| .+|..+++++...|+ +|++++++..+. ++...++..
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~  224 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLN  224 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhh
Confidence            45666555555433331        23 3578999999997 569999999999998 899998874433 222333321


Q ss_pred             E--E--eC-CCCCCcccHHHHHHhhcCCCCccEEEEccCChhh-HHHHHHhcccCCeEEEEEccCC
Q 017201          238 D--F--IN-PDDEPNKSISELVKGITHGMGVDYCFECTGVPSL-LSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       238 ~--v--~~-~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~-~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .  .  +. .+.   .++.+.++      .+|+||.++|.+.. +..  ..++++ ..++.+|.+.
T Consensus       225 ~~~~t~~~~t~~---~~L~e~l~------~ADIVIsAtg~p~~vI~~--e~vk~G-avVIDVgi~r  278 (320)
T 1edz_A          225 KHHVEDLGEYSE---DLLKKCSL------DSDVVITGVPSENYKFPT--EYIKEG-AVCINFACTK  278 (320)
T ss_dssp             CCEEEEEEECCH---HHHHHHHH------HCSEEEECCCCTTCCBCT--TTSCTT-EEEEECSSSC
T ss_pred             cccccccccccH---hHHHHHhc------cCCEEEECCCCCcceeCH--HHcCCC-eEEEEcCCCc
Confidence            0  0  00 000   23444443      48999999998743 332  236786 8888888664

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.03  E-value=0.017  Score=51.40  Aligned_cols=80  Identities=20%  Similarity=0.319  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCC---cE-E--eCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM---TD-F--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~---~~-v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+.   .. +  .|-.+  .+++.+.+.+..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   86 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN--EDETARAVDAVT   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC--HHHHHHHHHHHH
Confidence            4789999988 9999988888778899 899999998776543    23332   11 1  23332  223333333221


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . ..++|++|++.|.
T Consensus        87 ~~~g~id~lv~nAg~  101 (281)
T 3svt_A           87 AWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence            1 1269999999984

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.02  E-value=0.019  Score=50.39  Aligned_cols=79  Identities=22%  Similarity=0.254  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... +  .|-.+  .+++.+.+.+... ..++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS--EKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHCCCC
Confidence            4789999988 9999988888888899 899999987766543 3344322 1  23332  1233333332211 1169


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |++|++.|
T Consensus        88 d~li~~Ag   95 (265)
T 2o23_A           88 DVAVNCAG   95 (265)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.02  E-value=0.027  Score=49.95  Aligned_cols=71  Identities=20%  Similarity=0.245  Sum_probs=51.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      +...+.++||+|+|++|.+++..+...|+++|+++.++.+|.+. ++.++.+. .+  +     .     .   -..+|+
T Consensus       115 ~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~-~~--~-----~-----~---~~~~Di  178 (271)
T 1npy_A          115 HLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-IN--S-----L-----E---NQQADI  178 (271)
T ss_dssp             TCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ES--C-----C-----T---TCCCSE
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcc-ch--h-----h-----h---cccCCE
Confidence            34467899999999999998888888898789999999888654 44566421 11  1     0     0   126999


Q ss_pred             EEEccCCh
Q 017201          266 CFECTGVP  273 (375)
Q Consensus       266 vid~~g~~  273 (375)
                      ||++++..
T Consensus       179 vInaTp~g  186 (271)
T 1npy_A          179 LVNVTSIG  186 (271)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCC
Confidence            99999754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.02  E-value=0.021  Score=50.10  Aligned_cols=78  Identities=15%  Similarity=0.078  Sum_probs=50.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+++.+.+.+... -.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence            568999988 9999988888888899 9999999887765432    224321 1  23332  1233333332211 12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      ++|++|++.|
T Consensus        79 ~id~lv~nAg   88 (256)
T 1geg_A           79 GFDVIVNNAG   88 (256)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.01  E-value=0.035  Score=49.81  Aligned_cols=79  Identities=11%  Similarity=0.069  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc----CCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ++    +... +  .|-.+  .+++.+.+.+... 
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIKV  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC--HHHHHHHHHHHHHH
Confidence            5689999988 9999988888888899 8999999887765432 21    4322 1  23332  1233333322211 


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      ...+|++|++.|
T Consensus       102 ~g~id~li~~Ag  113 (302)
T 1w6u_A          102 AGHPNIVINNAA  113 (302)
T ss_dssp             TCSCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            126899999987

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.01  E-value=0.016  Score=49.72  Aligned_cols=87  Identities=16%  Similarity=0.171  Sum_probs=57.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .++++||+|+ +++|...++.+...|+ +|++++++++             .|-.+  .+++.+.+.++  + ++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~--~~~v~~~~~~~--g-~id~lv~   65 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD--EKSVYHYFETI--G-AFDHLIV   65 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC--HHHHHHHHHHH--C-SEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC--HHHHHHHHHHh--C-CCCEEEE
Confidence            4678999988 9999988887777798 8999987654             22222  12333333333  2 6999999


Q ss_pred             ccCCh-----------h---------------hHHHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVP-----------S---------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.|..           +               ..+.+...++++ |+++.++..
T Consensus        66 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~  118 (223)
T 3uce_A           66 TAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM  118 (223)
T ss_dssp             CCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence            88732           0               223344555665 899998754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.01  E-value=0.014  Score=52.06  Aligned_cols=79  Identities=11%  Similarity=0.122  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC---cE-E--eCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM---TD-F--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~---~~-v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+.   .. +  .|-.+  .+++.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   81 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC--HHHHHHHHHHHH
Confidence            4678999988 9999988888778899 9999999987765432    2232   11 1  23333  122322232221


Q ss_pred             C-CCCccEEEEccC
Q 017201          259 H-GMGVDYCFECTG  271 (375)
Q Consensus       259 ~-~~g~d~vid~~g  271 (375)
                      . -.++|++|++.|
T Consensus        82 ~~~g~iD~lv~nAg   95 (280)
T 1xkq_A           82 KQFGKIDVLVNNAG   95 (280)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1 116999999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.00  E-value=0.019  Score=50.32  Aligned_cols=79  Identities=23%  Similarity=0.193  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHhhhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-CCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD-FI--NPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++  .+.+++.+... ++  |-.+  .+++.+.+.+... -.+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSD--VAQIEALFALAEREFGG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS--HHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC--HHHHHHHHHHHHHHcCC
Confidence            4678999988 9999988888888899 89999887652  12222334322 22  3222  1223332322211 116


Q ss_pred             ccEEEEccC
Q 017201          263 VDYCFECTG  271 (375)
Q Consensus       263 ~d~vid~~g  271 (375)
                      +|++|++.|
T Consensus        80 id~lv~~Ag   88 (255)
T 2q2v_A           80 VDILVNNAG   88 (255)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.99  E-value=0.019  Score=50.91  Aligned_cols=80  Identities=20%  Similarity=0.334  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEEe---CCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFI---NPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v~---~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+....+   |-.+  .+++.+.+.+... .
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS--ESEIIEAFARLDEQG  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHC
Confidence            5789999988 9999988888888899 999999998776543    233443322   2222  2233333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus       102 g~iD~lv~nAg~  113 (271)
T 4ibo_A          102 IDVDILVNNAGI  113 (271)
T ss_dssp             CCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=95.99  E-value=0.013  Score=51.95  Aligned_cols=81  Identities=16%  Similarity=0.098  Sum_probs=51.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      ..++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... +  .|-.+  .+++.+.+.+... -.+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD--PDSVRALFTATVEKFGR  102 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS--HHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC--HHHHHHHHHHHHHHcCC
Confidence            45788999988 9999988888778899 899999998876554 3344221 1  23332  1233332322211 126


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus       103 iD~lVnnAg~  112 (272)
T 4dyv_A          103 VDVLFNNAGT  112 (272)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.99  E-value=0.022  Score=49.79  Aligned_cols=79  Identities=22%  Similarity=0.304  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  .+++.+.+.+... .
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN--TESVQNAVRSVHEQE   88 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHc
Confidence            4789999988 9999988888778898 999999988765432    2234322 1  23332  1233333332211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        89 ~~id~vi~~Ag   99 (260)
T 3awd_A           89 GRVDILVACAG   99 (260)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999987

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.98  E-value=0.061  Score=48.68  Aligned_cols=87  Identities=20%  Similarity=0.252  Sum_probs=61.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... .       .+..+.+.      +.|+||.++.
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-~-------~~~~~~~~------~~DvVi~av~   95 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL-G-------RTPAEVVS------TCDITFACVS   95 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE-C-------SCHHHHHH------HCSEEEECCS
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE-c-------CCHHHHHh------cCCEEEEeCC
Confidence            579999999999987777777888 8999999999888777777532 1       12222222      4799999998


Q ss_pred             ChhhHHHHHH-------hcccCCeEEEEEc
Q 017201          272 VPSLLSEALE-------TTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~~-------~l~~~~G~iv~~g  294 (375)
                      .+..+...+.       .+.++ ..++.++
T Consensus        96 ~~~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           96 DPKAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             SHHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             CHHHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            6655555543       34565 5666554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=95.97  E-value=0.027  Score=48.91  Aligned_cols=83  Identities=18%  Similarity=0.238  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC--cEE--eCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--TDF--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~--~~v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+.  ..+  ++-+..+.+++.+.+.+...
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            35789999988 9999988888888899 8999999988765542    2331  111  22211011222222222211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       ..++|++|++.|.
T Consensus        91 ~~g~id~lv~nAg~  104 (247)
T 3i1j_A           91 EFGRLDGLLHNASI  104 (247)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             1169999999873

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.97  E-value=0.028  Score=49.10  Aligned_cols=100  Identities=19%  Similarity=0.221  Sum_probs=66.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHh
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~  256 (375)
                      ....++++||-+|+| .|..++.+|+.+  +. +|++++.+++..+.+++    .|..   .++..      +..+.+..
T Consensus        75 ~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g------da~~~l~~  146 (247)
T 1sui_A           75 LKLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFREG------PALPVLDE  146 (247)
T ss_dssp             HHHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES------CHHHHHHH
T ss_pred             HHhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC------CHHHHHHH
Confidence            345678899999986 478888899986  45 99999999988877653    3442   12221      23333333


Q ss_pred             hc----CCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          257 IT----HGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~----~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +.    ....||+||-....   ...++.+.++|+++ |.++.-.
T Consensus       147 l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          147 MIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             HHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             HHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence            21    12369999754432   24678899999998 9887643

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.97  E-value=0.025  Score=50.34  Aligned_cols=34  Identities=21%  Similarity=0.214  Sum_probs=30.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .|+++||+|+ |++|.+.++.+...|+ +|++++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~   43 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC   43 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence            5789999988 9999998888888899 89999986

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.96  E-value=0.022  Score=49.52  Aligned_cols=78  Identities=13%  Similarity=0.145  Sum_probs=49.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-h----cCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A----FGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~----lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      +.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +    .+... +  .|-.+  .+++.+.+.+... -
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVAD--EGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            578999988 9999988887778898 8999999887765432 2    23221 1  23332  1233333322211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        79 ~~id~li~~Ag   89 (250)
T 2cfc_A           79 GAIDVLVNNAG   89 (250)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            16999999986

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=95.96  E-value=0.021  Score=49.66  Aligned_cols=80  Identities=20%  Similarity=0.302  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhc-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGIT-HG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~-~~  260 (375)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+... .  .|-.+  .+++.+.+.+.. ..
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISD--IESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHc
Confidence            4678999988 9999987777777899 9999999987765442    334322 1  23333  223333333322 12


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        81 ~~id~li~~Ag~   92 (247)
T 3lyl_A           81 LAIDILVNNAGI   92 (247)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.96  E-value=0.021  Score=50.73  Aligned_cols=80  Identities=16%  Similarity=0.188  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-------H----HhhhcCCcEE---eCCCCCCcccHHHHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-------E----KGKAFGMTDF---INPDDEPNKSISELV  254 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-------~----~~~~lg~~~v---~~~~~~~~~~~~~~i  254 (375)
                      .|+++||+|+ +++|...++.+...|+ +|+.++++.++.       +    .++..+....   .|-.+  .++..+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   81 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE--EDQVRAAV   81 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC--HHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHH
Confidence            5789999988 9999988887778899 899999887542       1    1122343221   23333  12233333


Q ss_pred             HhhcC-CCCccEEEEccCC
Q 017201          255 KGITH-GMGVDYCFECTGV  272 (375)
Q Consensus       255 ~~~~~-~~g~d~vid~~g~  272 (375)
                      .+... ..++|++|++.|.
T Consensus        82 ~~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCc
Confidence            32221 1269999999974

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.95  E-value=0.016  Score=50.78  Aligned_cols=76  Identities=17%  Similarity=0.083  Sum_probs=49.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh---cCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+   .+.+. .++..+  -..+.+.+.+.. + ++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~--v~~~~~~~~~~~-g-~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAY-G-QVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHH-S-CCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEECHHH--HHHHHHHHHHHh-C-CCCEE
Confidence            36899988 9999998888888899 89999988877654432   24322 223222  122333333322 2 69999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            999873

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.95  E-value=0.018  Score=51.00  Aligned_cols=79  Identities=18%  Similarity=0.195  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc--E-EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT--D-FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~--~-v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+..  . ..|-.+  .+++.+.+.+... -
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHHc
Confidence            5788999988 9999988887778899 9999999987765432    23322  1 223333  1233332322211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus       104 g~iD~lvnnAg  114 (270)
T 3ftp_A          104 GALNVLVNNAG  114 (270)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            16999999987

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.94  E-value=0.04  Score=50.44  Aligned_cols=89  Identities=18%  Similarity=0.239  Sum_probs=63.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++..|. +|++.++++++.+.+.++|...+    +     +.+.+.      ..|+|+.+
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~----~-----l~e~l~------~aDvVi~~  217 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV----S-----TPELAA------QSDFIVVA  217 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC----C-----HHHHHH------HCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC----C-----HHHHHh------hCCEEEEe
Confidence            57799999999999999999999999 89999988776666666665421    1     222222      47999998


Q ss_pred             cCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201          270 TGVPS----LL-SEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       270 ~g~~~----~~-~~~~~~l~~~~G~iv~~g~  295 (375)
                      +...+    .+ ...+..++++ ..++.++.
T Consensus       218 vp~~~~t~~~i~~~~~~~mk~g-ailIn~sr  247 (330)
T 2gcg_A          218 CSLTPATEGLCNKDFFQKMKET-AVFINISR  247 (330)
T ss_dssp             CCCCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred             CCCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            86431    22 3566778886 77776653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=95.93  E-value=0.02  Score=50.37  Aligned_cols=79  Identities=15%  Similarity=0.093  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCC--cE-EeCCCCCCcccHHHHHHhhcCC-CCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGM--TD-FINPDDEPNKSISELVKGITHG-MGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~--~~-v~~~~~~~~~~~~~~i~~~~~~-~g~  263 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++..  .. ..|-.+  .+++.+.+.+.... .++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4789999998 9999988887778899 9999999987765432 3322  11 123332  12333333322111 169


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |++|++.|
T Consensus        83 D~lv~~Ag   90 (260)
T 1nff_A           83 HVLVNNAG   90 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.93  E-value=0.03  Score=51.29  Aligned_cols=97  Identities=16%  Similarity=0.165  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc------CC----cEEeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF------GM----TDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l------g~----~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ..++.+||++|+|. |..+..++++.+..+|++++.+++-.+.+++.      +.    -.++.      .+..+.+...
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~------~D~~~~l~~~  190 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNA  190 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTS
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE------CCHHHHHHhc
Confidence            45678999998863 66778888876545999999999888777642      11    11221      2344444333


Q ss_pred             cCCCCccEEEEccC----------ChhhHHHHHHhcccCCeEEEEE
Q 017201          258 THGMGVDYCFECTG----------VPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       258 ~~~~g~d~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .. ..||+|+-...          ....+..+.+.|+++ |.++.-
T Consensus       191 ~~-~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          191 AE-GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CT-TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cC-CCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            22 37999885332          234688899999997 988875

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.93  E-value=0.024  Score=50.33  Aligned_cols=96  Identities=17%  Similarity=0.195  Sum_probs=65.1

Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcc
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK  248 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~  248 (375)
                      .+||+...+...+.+..---.|.+++|+|.| .+|..+++++...|+ +|+++.+..                      .
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t----------------------~  196 (285)
T 3l07_A          140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT----------------------T  196 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------S
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------h
Confidence            4555544444433333334589999999985 589999999999999 888876431                      1


Q ss_pred             cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       249 ~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++.+.++      .+|+||.++|.+..+..  ..++++ ..++.+|...
T Consensus       197 ~L~~~~~------~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~~  236 (285)
T 3l07_A          197 DLKSHTT------KADILIVAVGKPNFITA--DMVKEG-AVVIDVGINH  236 (285)
T ss_dssp             SHHHHHT------TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCEE
T ss_pred             hHHHhcc------cCCEEEECCCCCCCCCH--HHcCCC-cEEEEecccC
Confidence            2333332      58999999998744332  456886 8888887553

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.92  E-value=0.021  Score=49.11  Aligned_cols=78  Identities=8%  Similarity=0.051  Sum_probs=50.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC-CcEE-eCCCCCCcccHHHHHHhhcC-CCCccE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG-MTDF-INPDDEPNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg-~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      +.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +++ ...+ .|-.+  .+++.+.+.+... -.++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVRE--EGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            568999988 9999988888888899 8999999887765443 332 2221 23332  2233333322211 116999


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      +|++.|
T Consensus        82 li~~Ag   87 (234)
T 2ehd_A           82 LVNNAG   87 (234)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=95.92  E-value=0.018  Score=51.81  Aligned_cols=79  Identities=15%  Similarity=0.170  Sum_probs=50.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCC-c--E-EeCCCCCCc-ccH---HHHHH
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM-T--D-FINPDDEPN-KSI---SELVK  255 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~-~--~-v~~~~~~~~-~~~---~~~i~  255 (375)
                      ..+.+|||+|+ |++|...++.+...|+ +|++++++.++.+.+    ++.+. .  . ..|-.+  . +..   .+.+.
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~v~~~~~~~~   86 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD--PIATMSSLADFIK   86 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS--CHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC--cHHHHHHHHHHHH
Confidence            45789999998 9999988777777899 999999998775443    22222 1  1 123333  1 112   22222


Q ss_pred             hhcCCCCccEEEEccCC
Q 017201          256 GITHGMGVDYCFECTGV  272 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~  272 (375)
                      +..+  ++|++|++.|.
T Consensus        87 ~~~g--~iD~lv~nAg~  101 (311)
T 3o26_A           87 THFG--KLDILVNNAGV  101 (311)
T ss_dssp             HHHS--SCCEEEECCCC
T ss_pred             HhCC--CCCEEEECCcc
Confidence            2222  69999999984

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.91  E-value=0.051  Score=46.59  Aligned_cols=114  Identities=14%  Similarity=0.113  Sum_probs=67.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~-~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      -.|.+|||+|+|.+|...++.+...|+ +|++++.... ..+ ++.+.+.. .+. .++..+++          .++|+|
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~-~i~-~~~~~~dL----------~~adLV   95 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLR-VKR-KKVGEEDL----------LNVFFI   95 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCE-EEC-SCCCGGGS----------SSCSEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcE-EEE-CCCCHhHh----------CCCCEE
Confidence            357899999999999999999999999 8988886543 222 22222333 222 22111221          269999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC-CceEEEE
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGT  318 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~~~~~  318 (375)
                      |-+++.+ .++..+...+.. |..+...... ...+|-...++.+ .+++.-+
T Consensus        96 IaAT~d~-~~N~~I~~~ak~-gi~VNvvD~p-~~~~f~~Paiv~rg~l~iaIS  145 (223)
T 3dfz_A           96 VVATNDQ-AVNKFVKQHIKN-DQLVNMASSF-SDGNIQIPAQFSRGRLSLAIS  145 (223)
T ss_dssp             EECCCCT-HHHHHHHHHSCT-TCEEEC------CCSEECCEEEEETTEEEEEE
T ss_pred             EECCCCH-HHHHHHHHHHhC-CCEEEEeCCc-ccCeEEEeeEEEeCCEEEEEE
Confidence            9999887 556655555555 7777664332 2334443333333 3454433

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.91  E-value=0.012  Score=54.44  Aligned_cols=49  Identities=27%  Similarity=0.268  Sum_probs=41.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HhhhcCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAFGMT  237 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~lg~~  237 (375)
                      --.|++|+|+|.|.+|..+++.+...|+ +|++.++++++.+ ++++++++
T Consensus       170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            3578999999999999999999999999 8999999888776 44556654

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.91  E-value=0.05  Score=51.27  Aligned_cols=95  Identities=13%  Similarity=0.085  Sum_probs=61.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC--CeEEEEcCChhhHHHhh-hcC------CcE-EeCCCCCCcccHHHHHHhhcCCC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGA--AKIIGIDKNPWKKEKGK-AFG------MTD-FINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~--~~V~~~~~~~~~~~~~~-~lg------~~~-v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .+|+|+|+|.+|...++.+...|.  .+|++++++.++.+.+. +++      ... .+|..+  .+++.+.+.+.    
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d--~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS--IEELVALINEV----   75 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC--HHHHHHHHHHH----
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC--HHHHHHHHHhh----
Confidence            379999999999988887777773  38999999998876543 332      222 223322  12333333332    


Q ss_pred             CccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          262 GVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       262 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ++|+||++++.......+..++..+ -.++.+
T Consensus        76 ~~DvVin~ag~~~~~~v~~a~l~~g-~~vvD~  106 (405)
T 4ina_A           76 KPQIVLNIALPYQDLTIMEACLRTG-VPYLDT  106 (405)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHHT-CCEEES
T ss_pred             CCCEEEECCCcccChHHHHHHHHhC-CCEEEe
Confidence            5899999998654445555666665 555544

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.90  E-value=0.029  Score=49.47  Aligned_cols=80  Identities=13%  Similarity=0.054  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----h-cCCc-E-E--eCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMT-D-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lg~~-~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.    + .+.. . .  .|-.+  .++..+.+.+...
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   83 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD--ALQVRAFAEACER   83 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            4789999988 9999988888888899 8999999988765432    1 3322 1 1  23333  1223222222211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -.++|++|++.|.
T Consensus        84 ~~g~id~lvnnAg~   97 (265)
T 3lf2_A           84 TLGCASILVNNAGQ   97 (265)
T ss_dssp             HHCSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence             1169999999974

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.89  E-value=0.038  Score=53.04  Aligned_cols=94  Identities=12%  Similarity=0.110  Sum_probs=58.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhh-cCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKA-FGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~-lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .+.+|+|+|+|.+|...+..+... |. +|+++++++++.+.+.+ .+... .++..+  .+++.+.+    .  ++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d--~~~l~~~l----~--~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD--DSALDKVL----A--DNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC--HHHHHHHH----H--TSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC--HHHHHHHH----c--CCCEE
Confidence            456899999999999888777766 66 89999999888765533 34332 233322  11222222    1  69999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      |++++.......+..++..+ ..++..
T Consensus        93 In~tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             EECCchhhhHHHHHHHHhcC-CEEEEe
Confidence            99998652223344556664 555544

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.89  E-value=0.018  Score=50.50  Aligned_cols=96  Identities=14%  Similarity=0.023  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCC---------------------c-EEeCCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGM---------------------T-DFINPD  243 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~---------------------~-~v~~~~  243 (375)
                      ...++.+||.+|+|. |..+..||+. |+ +|++++.++.-.+.+++ .+.                     . .++.. 
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  140 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC-  140 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES-
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC-
Confidence            346889999999974 7777788875 88 99999999988887753 221                     1 11111 


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEEc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                           ++.+ + .......||+|++...-        ...+....++|+|+ |+++++.
T Consensus       141 -----D~~~-l-~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          141 -----SIFD-L-PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             -----CTTT-G-GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             -----cccc-C-CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence                 1100 1 11111379999975421        12577788999997 9986543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.89  E-value=0.021  Score=50.77  Aligned_cols=80  Identities=16%  Similarity=0.159  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +++... +  .|-.+  .+.+.+.+.+... ..++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD--GERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC--HHHHHHHHHHHHHhCCCC
Confidence            4678999988 9999998888888899 9999999988766543 343322 1  23332  1223222222211 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        81 d~lv~~Ag~   89 (281)
T 3m1a_A           81 DVLVNNAGR   89 (281)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999873

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.89  E-value=0.064  Score=48.93  Aligned_cols=132  Identities=14%  Similarity=0.180  Sum_probs=80.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|.|+|+|.+|...+...+.. ++ +++ ++++++++.+. ++.+|..  +  .     ++.+.+.    ...+|+|+.+
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~--~-----~~~~~l~----~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V--R-----TIDAIEA----AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E--C-----CHHHHHH----CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c--C-----CHHHHhc----CCCCCEEEEe
Confidence            689999999998777666654 66 666 56777777654 4556765  2  2     2333332    2369999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      +....+.+.+..++..+  +-+++..+.. ... ....... -.+++.+.-.+  ..++...+..+.+++++|.+-
T Consensus        71 tp~~~h~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           71 TPTDTHADLIERFARAG--KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF--NRRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHTTTTC
T ss_pred             CCchhHHHHHHHHHHcC--CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc--cccCCHHHHHHHHHHHcCCCC
Confidence            98887888888888874  5566654432 110 1111111 23455443222  233345577888999988764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.89  E-value=0.023  Score=50.49  Aligned_cols=80  Identities=11%  Similarity=0.089  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-----hcCCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-----AFGMTD-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+.     ..+... .  .|-.+  .++..+.+.+...
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~  101 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA--PPAVMAAVDQALK  101 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            46789999988 9999988888888899 9999999887654332     224322 1  23333  2233333332211


Q ss_pred             -CCCccEEEEccC
Q 017201          260 -GMGVDYCFECTG  271 (375)
Q Consensus       260 -~~g~d~vid~~g  271 (375)
                       ..++|++|++.|
T Consensus       102 ~~g~id~lv~nAg  114 (277)
T 4fc7_A          102 EFGRIDILINCAA  114 (277)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence             126999999997

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.88  E-value=0.036  Score=47.47  Aligned_cols=99  Identities=19%  Similarity=0.275  Sum_probs=66.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC-cEEeCCCCCCcccHHHHHHhhcC
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~-~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ...++++++||=+|+|..|..++.+++..+. +|++++.+++..+.+++    .+. ..++..+-   ..+    ..+.+
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~----~~~~~  121 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GII----KGVVE  121 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CSS----TTTCC
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hhh----hhccc
Confidence            3456799999999998668888888887766 99999999988877653    332 12222211   001    11222


Q ss_pred             CCCccEEEEccCC-------------------------hhhHHHHHHhcccCCeEEEEE
Q 017201          260 GMGVDYCFECTGV-------------------------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       260 ~~g~d~vid~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                       ..||+|+-...-                         ...+..+.+.|+++ |+++.+
T Consensus       122 -~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          122 -GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             -SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             -CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence             379999854210                         34677888899997 988875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.87  E-value=0.02  Score=50.24  Aligned_cols=79  Identities=14%  Similarity=0.164  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+...   ..|-.+  .+++.+.+.+... -
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK--AEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999988 9999988888888899 999999988766433    2234322   123322  1223222222211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        90 g~iD~lv~~Ag  100 (260)
T 2zat_A           90 GGVDILVSNAA  100 (260)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999987

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.87  E-value=0.026  Score=49.91  Aligned_cols=79  Identities=18%  Similarity=0.189  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcC----CcEE-eCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG----MTDF-INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg----~~~v-~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++    ...+ .|-.+  .+++.+.+.+... ..
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            5789999998 9999988887778898 999999887765433 2332    1111 23332  1233333322211 12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      ++|++|++.|
T Consensus        92 ~id~li~~Ag  101 (278)
T 2bgk_A           92 KLDIMFGNVG  101 (278)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            6999999887

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.86  E-value=0.023  Score=49.28  Aligned_cols=101  Identities=20%  Similarity=0.175  Sum_probs=66.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHhh
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ....++.+||-+|+| .|..++.+|+.+. ..+|++++.+++..+.+++    .|..   .++..      +..+.+..+
T Consensus        66 ~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g------da~~~l~~l  138 (237)
T 3c3y_A           66 LKLVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES------DAMLALDNL  138 (237)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES------CHHHHHHHH
T ss_pred             HHhhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc------CHHHHHHHH
Confidence            345678899999986 4778888898863 2399999999988877753    3542   12221      233333333


Q ss_pred             c----CCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 T----HGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~----~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .    ....||+||-....   ...++.+.++|+++ |.++.-.
T Consensus       139 ~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~  181 (237)
T 3c3y_A          139 LQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN  181 (237)
T ss_dssp             HHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence            1    12369999754432   24578899999997 8887643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.86  E-value=0.021  Score=50.04  Aligned_cols=77  Identities=14%  Similarity=0.182  Sum_probs=47.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE---EeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD---FINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .++++||+|+ +++|...++.+...|+ +|++++++.++.  .++++...   ..|-.+  .++..+.+.......++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGEDV--VADLGDRARFAAADVTD--EAAVASALDLAETMGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHHH--HHHTCTTEEEEECCTTC--HHHHHHHHHHHHHHSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHHH--HHhcCCceEEEECCCCC--HHHHHHHHHHHHHhCCCCE
Confidence            4688999988 9999988877778899 899998755433  33444322   123333  1223222222211226999


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      +|++.|
T Consensus        83 lv~nAg   88 (257)
T 3tl3_A           83 VVNCAG   88 (257)
T ss_dssp             EEECGG
T ss_pred             EEECCC
Confidence            999997

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.85  E-value=0.11  Score=48.00  Aligned_cols=92  Identities=17%  Similarity=0.192  Sum_probs=62.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+...   ..+|+||-++
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~--------~s~~e~~~~a---~~~DvVi~~v   89 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA--------RSIEEFCAKL---VKPRVVWLMV   89 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC--------SSHHHHHHHS---CSSCEEEECS
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe--------CCHHHHHhcC---CCCCEEEEeC
Confidence            4689999999999987777777898 99999999999988877775421        2333333321   1469999998


Q ss_pred             CChhhHHH----HHHhcccCCeEEEEEccC
Q 017201          271 GVPSLLSE----ALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       271 g~~~~~~~----~~~~l~~~~G~iv~~g~~  296 (375)
                      ... .+..    ....+.++ ..++.++..
T Consensus        90 p~~-~v~~vl~~l~~~l~~g-~iiId~st~  117 (358)
T 4e21_A           90 PAA-VVDSMLQRMTPLLAAN-DIVIDGGNS  117 (358)
T ss_dssp             CGG-GHHHHHHHHGGGCCTT-CEEEECSSC
T ss_pred             CHH-HHHHHHHHHHhhCCCC-CEEEeCCCC
Confidence            766 3333    33445554 566655433

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.85  E-value=0.019  Score=50.88  Aligned_cols=41  Identities=7%  Similarity=0.084  Sum_probs=33.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG  231 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~  231 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~   52 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRL   52 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHH
Confidence            4678999988 9999988888778899 9999998 77765543

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.85  E-value=0.052  Score=45.73  Aligned_cols=96  Identities=10%  Similarity=-0.005  Sum_probs=62.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-C------------------CcEE-eCCC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-G------------------MTDF-INPD  243 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g------------------~~~v-~~~~  243 (375)
                      ....+.++.+||.+|+|. |..+..+++. |+ +|++++.+++-.+.+++. +                  ...+ -|..
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            445678899999999974 7777788876 88 999999999888777642 1                  1111 1211


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCC----h----hhHHHHHHhcccCCeEEEEE
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGV----P----SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~----~----~~~~~~~~~l~~~~G~iv~~  293 (375)
                      +   -.+.       ....||+|++...-    .    ..+....+.|+|+ |+++.+
T Consensus        93 ~---l~~~-------~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           93 A---LTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             S---STHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             c---CCcc-------cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            1   1111       00269999974321    1    2467889999997 984443

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.85  E-value=0.023  Score=49.87  Aligned_cols=67  Identities=18%  Similarity=0.235  Sum_probs=48.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .| +++|+|+|++|.+++..+...|+.+|++++++++|.+.+. +++.   ...     ++..+.+.      ++|+||+
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~-----~~~~~~~~------~aDiVIn  172 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL-----DQLDEVVK------KAKSLFN  172 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG-----GGHHHHHH------TCSEEEE
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH-----HHHHhhhc------CCCEEEE
Confidence            56 9999999999999888888899878999999998876553 2332   111     23332221      5899999


Q ss_pred             ccC
Q 017201          269 CTG  271 (375)
Q Consensus       269 ~~g  271 (375)
                      ++.
T Consensus       173 atp  175 (253)
T 3u62_A          173 TTS  175 (253)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            885

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.84  E-value=0.016  Score=50.97  Aligned_cols=80  Identities=19%  Similarity=0.205  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC--
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH--  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~--  259 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  .+++.+.+.+...  
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   89 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            4678999988 9999988888888898 999999988766543    2233322 1  23322  1222222222211  


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      +.++|++|++.|.
T Consensus        90 ~~~id~li~~Ag~  102 (266)
T 1xq1_A           90 GGKLDILINNLGA  102 (266)
T ss_dssp             TTCCSEEEEECCC
T ss_pred             CCCCcEEEECCCC
Confidence            1269999999874

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.84  E-value=0.11  Score=46.76  Aligned_cols=90  Identities=16%  Similarity=0.100  Sum_probs=62.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|....        .+..+.+.      +.|+||-++
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~e~~~------~aDvVi~~v   73 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC--------ESVKAALS------ASPATIFVL   73 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC--------SSHHHHHH------HSSEEEECC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec--------CCHHHHHh------cCCEEEEEe
Confidence            4679999999999987777777898 89999999999988877776421        12333332      479999999


Q ss_pred             CChhhHHHHH-----HhcccCCeEEEEEccC
Q 017201          271 GVPSLLSEAL-----ETTKVGKGKVIVIGVG  296 (375)
Q Consensus       271 g~~~~~~~~~-----~~l~~~~G~iv~~g~~  296 (375)
                      ..+..+...+     ..+.++ ..++.++..
T Consensus        74 p~~~~~~~v~~~~~l~~~~~g-~ivid~st~  103 (306)
T 3l6d_A           74 LDNHATHEVLGMPGVARALAH-RTIVDYTTN  103 (306)
T ss_dssp             SSHHHHHHHHTSTTHHHHTTT-CEEEECCCC
T ss_pred             CCHHHHHHHhcccchhhccCC-CEEEECCCC
Confidence            8765444433     234554 566666533

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.84  E-value=0.027  Score=49.92  Aligned_cols=35  Identities=23%  Similarity=0.235  Sum_probs=30.1

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      -.|+++||+|+ |++|...++.+...|+ +|++++++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   46 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLC   46 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecc
Confidence            35789999988 9999988888888899 89999876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.84  E-value=0.024  Score=50.29  Aligned_cols=95  Identities=17%  Similarity=0.149  Sum_probs=59.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+...+...+. |..+   .+   .+.+...  ++|+||+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d---~~---~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ---PE---SLQKAFA--GVSKLLF   72 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC---HH---HHHHHTT--TCSEEEE
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC---HH---HHHHHHh--cCCEEEE
Confidence            6899998 99999888777766  87 899999988776655444554332 3332   22   2333332  5899999


Q ss_pred             ccCCh-------hhHHHHHHhcccC-CeEEEEEccC
Q 017201          269 CTGVP-------SLLSEALETTKVG-KGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~-------~~~~~~~~~l~~~-~G~iv~~g~~  296 (375)
                      +.+..       ......++.+... -++++.++..
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            98741       1122334444332 1478887654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.83  E-value=0.018  Score=51.89  Aligned_cols=79  Identities=18%  Similarity=0.175  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC---cE-E--eCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM---TD-F--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~---~~-v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+.   .. +  .|-.+  .+++.+.+.+..
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~  101 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL  101 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC--HHHHHHHHHHHH
Confidence            4688999988 9999988888878899 8999999987765432    2232   11 1  23333  122333232221


Q ss_pred             C-CCCccEEEEccC
Q 017201          259 H-GMGVDYCFECTG  271 (375)
Q Consensus       259 ~-~~g~d~vid~~g  271 (375)
                      . -.++|++|++.|
T Consensus       102 ~~~g~iD~lvnnAG  115 (297)
T 1xhl_A          102 AKFGKIDILVNNAG  115 (297)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1 116999999987

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.83  E-value=0.018  Score=50.13  Aligned_cols=80  Identities=16%  Similarity=0.116  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  .+.+.+.+.+... .
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4689999988 9999988888888898 899999988765433    2234322 1  23322  1223332222211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        87 ~~~d~vi~~Ag~   98 (255)
T 1fmc_A           87 GKVDILVNNAGG   98 (255)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.83  E-value=0.017  Score=51.64  Aligned_cols=93  Identities=15%  Similarity=0.144  Sum_probs=63.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-----CC---------c--EEeCCCCCCcccHHH
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-----GM---------T--DFINPDDEPNKSISE  252 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-----g~---------~--~v~~~~~~~~~~~~~  252 (375)
                      .++.+||++|+|. |..+..++++ +..+|++++.+++-.+.+++.     +.         .  .++.      .|..+
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~------~D~~~  145 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGFE  145 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE------CchHH
Confidence            4678999998864 6677788887 766999999999888877642     11         1  1221      23333


Q ss_pred             HHHhhcCCCCccEEEEccC----------ChhhHHHHHHhcccCCeEEEEE
Q 017201          253 LVKGITHGMGVDYCFECTG----------VPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .+..  . ..||+|+-...          ..+.++.+.+.|+++ |.++..
T Consensus       146 ~l~~--~-~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          146 FIKN--N-RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             HHHH--C-CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             Hhcc--c-CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence            3433  2 37999875443          234678899999997 988775

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.83  E-value=0.098  Score=48.16  Aligned_cols=134  Identities=11%  Similarity=0.033  Sum_probs=81.8

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHc-CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGLGTVGL-GAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Gag~~G~-~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -+|.|+|+|.+|. ..+...+.. ++ +++ ++++++++.+. ++++|...+-        ++.+.+    ....+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~~~~--------~~~~ll----~~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFGGEPVE--------GYPALL----ERDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHCSEEEE--------SHHHHH----TCTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcCCCCcC--------CHHHHh----cCCCCCEEE
Confidence            4799999999997 455555555 66 666 45677776654 4567775431        233322    233799999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHH-hhcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIA-LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      .++....+.+.+..++..+  +-+++..+.. ... ...+.. .-.+++.+.-.+  ..+....+..+.+++++|.+-
T Consensus        95 i~tp~~~h~~~~~~al~aG--k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  168 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAG--KHVLAEKPLTTDRPQAERLFAVARERGLLLMENF--MFLHHPQHRQVADMLDEGVIG  168 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC--GGGGCTHHHHHHHHHHTTTTC
T ss_pred             ECCCcHHHHHHHHHHHHCC--CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe--cccCCHHHHHHHHHHhcCCCC
Confidence            9998887888888888874  5566765532 110 111111 123455443222  233455678888999988773

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.82  E-value=0.034  Score=49.49  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHhh----hc-CCcE-Ee--CCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKGK----AF-GMTD-FI--NPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~~----~l-g~~~-v~--~~~~~~~~~~~~~i~~~~~  259 (375)
                      .++++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+.    +. +... ++  |-.+  .+++.+.+.+...
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  100 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK--PSEIADMMAMVAD  100 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            4689999988 9999988888888899 8999988 444443322    22 3222 22  2222  2233333332211


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -.++|++|++.|.
T Consensus       101 ~~g~iD~lv~nAg~  114 (281)
T 3v2h_A          101 RFGGADILVNNAGV  114 (281)
T ss_dssp             HTSSCSEEEECCCC
T ss_pred             HCCCCCEEEECCCC
Confidence             1269999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.82  E-value=0.021  Score=49.69  Aligned_cols=80  Identities=21%  Similarity=0.226  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+... .  .|-.+  .+++.+.+.+... 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN--AEDVTNMVKQTVDV   79 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999988 9999988888888899 8999988 76665433    2234322 1  23333  1233333332211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 2uvd_A           80 FGQVDILVNNAGV   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1169999999873

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.81  E-value=0.084  Score=42.14  Aligned_cols=94  Identities=9%  Similarity=0.016  Sum_probs=58.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHhh---hcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccE
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKGK---AFGMTDFI-NPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~-~~~~~~~~---~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ..+|+|+|+|.+|...++.+...|. +|++++++ +++.+.++   ..|...+. |..+   .+   .+.+..- .++|.
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~---~~---~l~~a~i-~~ad~   74 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPGDSND---SS---VLKKAGI-DRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS---HH---HHHHHTT-TTCSE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEEcCCCC---HH---HHHHcCh-hhCCE
Confidence            4679999999999999888888898 89999987 45554443   23444333 2222   22   2332212 26999


Q ss_pred             EEEccCChhh---HHHHHHhcccCCeEEEEE
Q 017201          266 CFECTGVPSL---LSEALETTKVGKGKVIVI  293 (375)
Q Consensus       266 vid~~g~~~~---~~~~~~~l~~~~G~iv~~  293 (375)
                      ||-+++++..   +....+.+.+. .+++..
T Consensus        75 vi~~~~~d~~n~~~~~~a~~~~~~-~~ii~~  104 (153)
T 1id1_A           75 ILALSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             EEEecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            9999987632   12233344443 455543

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.80  E-value=0.039  Score=50.81  Aligned_cols=91  Identities=19%  Similarity=0.325  Sum_probs=62.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++. ..+.+|+..+        .++.+.+.      ..|+|+-
T Consensus       166 l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~--------~~l~ell~------~aDvV~l  229 (347)
T 1mx3_A          166 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF------HSDCVTL  229 (347)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH------HCSEEEE
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec--------CCHHHHHh------cCCEEEE
Confidence            367899999999999999999999999 999998776542 3445665432        12322222      4788888


Q ss_pred             ccCChh----hH-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPS----LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++...+    .+ ...+..++++ ..++.++..
T Consensus       230 ~~P~t~~t~~li~~~~l~~mk~g-ailIN~arg  261 (347)
T 1mx3_A          230 HCGLNEHNHHLINDFTVKQMRQG-AFLVNTARG  261 (347)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTT-EEEEECSCT
T ss_pred             cCCCCHHHHHHhHHHHHhcCCCC-CEEEECCCC
Confidence            775421    22 4567778886 777777644

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=95.78  E-value=0.032  Score=50.15  Aligned_cols=79  Identities=19%  Similarity=0.167  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----hhhcCCcEE---eCCCCCCccc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN------------PWKKEK----GKAFGMTDF---INPDDEPNKS  249 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~------------~~~~~~----~~~lg~~~v---~~~~~~~~~~  249 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|++++++            +++.+.    +++.+....   .|-.+  .++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~  103 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD--FDA  103 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC--HHH
Confidence            5789999988 9999988888888899 89998876            343332    233444322   23333  223


Q ss_pred             HHHHHHhhcC-CCCccEEEEccC
Q 017201          250 ISELVKGITH-GMGVDYCFECTG  271 (375)
Q Consensus       250 ~~~~i~~~~~-~~g~d~vid~~g  271 (375)
                      +.+.+.+... -.++|++|++.|
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCC
Confidence            3333332211 126999999987

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.78  E-value=0.049  Score=50.39  Aligned_cols=87  Identities=22%  Similarity=0.359  Sum_probs=59.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++. +.+.+.+.|+..         .++.+.+.      ..|+|+-+
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~---------~~l~ell~------~aDvV~l~  237 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP---------ASLEDVLT------KSDFIFVV  237 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE---------CCHHHHHH------SCSEEEEC
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee---------CCHHHHHh------cCCEEEEc
Confidence            47899999999999999999999999 999999875 344455566542         12322221      46787776


Q ss_pred             cCChh----hH-HHHHHhcccCCeEEEEEc
Q 017201          270 TGVPS----LL-SEALETTKVGKGKVIVIG  294 (375)
Q Consensus       270 ~g~~~----~~-~~~~~~l~~~~G~iv~~g  294 (375)
                      ....+    .+ ...+..++++ +.++.++
T Consensus       238 ~Plt~~T~~li~~~~l~~mk~g-ailIN~a  266 (365)
T 4hy3_A          238 AAVTSENKRFLGAEAFSSMRRG-AAFILLS  266 (365)
T ss_dssp             SCSSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred             CcCCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence            64321    11 3566777776 7777776

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.78  E-value=0.02  Score=50.85  Aligned_cols=80  Identities=11%  Similarity=0.068  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc------CCcE-E--eCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF------GMTD-F--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l------g~~~-v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++      +... +  .|-.+  .+++.+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~   81 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   81 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC--HHHHHHHHHHHH
Confidence            4678999988 9999988887777899 9999999987765432 22      2111 1  23332  122333332221


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . -.++|++|++.|.
T Consensus        82 ~~~g~id~lv~~Ag~   96 (278)
T 1spx_A           82 GKFGKLDILVNNAGA   96 (278)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHcCCCCEEEECCCC
Confidence            1 1169999999873

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.76  E-value=0.029  Score=49.18  Aligned_cols=79  Identities=18%  Similarity=0.208  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHh-h---hcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKG-K---AFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~--~~~~-~---~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++  .+.+ +   +.+... .  .|-.+  .+++.+.+.+... 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD--KANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            578999988 9999987777777799 89999988776  4322 2   223322 1  23332  1223322322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        79 ~g~iD~lv~nAg~   91 (258)
T 3a28_C           79 LGGFDVLVNNAGI   91 (258)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence            1169999999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.76  E-value=0.033  Score=49.99  Aligned_cols=40  Identities=15%  Similarity=0.173  Sum_probs=34.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  230 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~  230 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~   57 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKS   57 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            4689999988 9999988888888898 89999998877654

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.75  E-value=0.025  Score=50.59  Aligned_cols=95  Identities=24%  Similarity=0.270  Sum_probs=65.3

Q ss_pred             ccccchhhhhhhhhhhcC-CCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          170 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Gag-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      .+||+.......+ +..+ --.|.+|+|+|.| .+|.-+++++...|+ +|+++.+..                      
T Consensus       144 ~~PcTp~gi~~ll-~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t----------------------  199 (301)
T 1a4i_A          144 FIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT----------------------  199 (301)
T ss_dssp             CCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------
T ss_pred             ccCchHHHHHHHH-HHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECCc----------------------
Confidence            4565444433333 3333 3589999999997 589999999999998 888886331                      


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .++.+.++      .+|+||.++|.+..+..  ..++++ ..++.+|...
T Consensus       200 ~~L~~~~~------~ADIVI~Avg~p~~I~~--~~vk~G-avVIDVgi~~  240 (301)
T 1a4i_A          200 AHLDEEVN------KGDILVVATGQPEMVKG--EWIKPG-AIVIDCGINY  240 (301)
T ss_dssp             SSHHHHHT------TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCBC
T ss_pred             ccHHHHhc------cCCEEEECCCCcccCCH--HHcCCC-cEEEEccCCC
Confidence            23444443      58999999998744332  346787 8999998664

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.74  E-value=0.027  Score=51.76  Aligned_cols=133  Identities=11%  Similarity=0.082  Sum_probs=80.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|.|+|+|.+|...+...+.. ++ +++ ++++++++.+. ++++|.. ++.       ++.+    +.....+|+|+.+
T Consensus         6 rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~-~~~-------~~~~----~l~~~~~D~V~i~   72 (344)
T 3euw_A            6 RIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGAE-AVA-------SPDE----VFARDDIDGIVIG   72 (344)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTCE-EES-------SHHH----HTTCSCCCEEEEC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCc-eeC-------CHHH----HhcCCCCCEEEEe
Confidence            689999999998777666655 66 666 56777777654 4567743 331       2322    2233479999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHHhh-cCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      +....+.+.+..++..+  +-+++..+.. ... ........ .+++.+.-.+  ..++...+..+.+++++|.+-
T Consensus        73 tp~~~h~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  144 (344)
T 3euw_A           73 SPTSTHVDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGF--NRRFDPSFAAINARVANQEIG  144 (344)
T ss_dssp             SCGGGHHHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             CCchhhHHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecc--hhhcCHHHHHHHHHHhcCCCC
Confidence            98887888888888874  4455654432 110 11111121 2334333221  233345577888899988764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.73  E-value=0.036  Score=48.57  Aligned_cols=41  Identities=15%  Similarity=0.150  Sum_probs=34.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4678999988 9999988887777898 999999988776543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.73  E-value=0.023  Score=49.72  Aligned_cols=79  Identities=15%  Similarity=0.111  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++ ++++.+.+    ++.+... +  .|-.+  .+++.+.+.+....
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4688999988 9999988877777899 8999998 66655432    2234322 1  23332  12333333322111


Q ss_pred             -CCccEEEEccC
Q 017201          261 -MGVDYCFECTG  271 (375)
Q Consensus       261 -~g~d~vid~~g  271 (375)
                       .++|++|++.|
T Consensus        83 ~g~id~li~~Ag   94 (261)
T 1gee_A           83 FGKLDVMINNAG   94 (261)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             16999999987

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.72  E-value=0.005  Score=54.59  Aligned_cols=74  Identities=20%  Similarity=0.218  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHH---HHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS---ELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~---~~i~~~~~~~g~d~  265 (375)
                      .|+++||+|+ |++|...++.+...|+ +|++++++.++.+....+.    .|-.+  .+...   +.+.+.. + ++|+
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~----~Dv~~--~~~~~~~~~~~~~~~-g-~iD~   97 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHLP----GDLRE--AAYADGLPGAVAAGL-G-RLDI   97 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEECC----CCTTS--HHHHHHHHHHHHHHH-S-CCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhccC----cCCCC--HHHHHHHHHHHHHhc-C-CCCE
Confidence            5789999988 9999988888878899 9999998776543321111    12222  11222   2222222 2 6999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        98 lvnnAg~  104 (266)
T 3uxy_A           98 VVNNAGV  104 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.71  E-value=0.015  Score=50.82  Aligned_cols=36  Identities=22%  Similarity=0.308  Sum_probs=30.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      +++||+|+ |.+|...++.+...|+ +|+++++++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~   38 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEV   38 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhh
Confidence            36899988 9999998888888899 899999887654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.71  E-value=0.023  Score=49.52  Aligned_cols=80  Identities=23%  Similarity=0.256  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++ +++.+.+.    ..+... +  .|-.+  .+++.+.+.+....
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT--SEACQQLVDEFVAK   82 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4678999988 9999988887778899 89999988 66654332    223321 1  23332  12333333322111


Q ss_pred             -CCccEEEEccCC
Q 017201          261 -MGVDYCFECTGV  272 (375)
Q Consensus       261 -~g~d~vid~~g~  272 (375)
                       .++|++|++.|.
T Consensus        83 ~g~id~vi~~Ag~   95 (258)
T 3afn_B           83 FGGIDVLINNAGG   95 (258)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             169999999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.70  E-value=0.036  Score=48.33  Aligned_cols=77  Identities=17%  Similarity=0.229  Sum_probs=50.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE-E--eCCCCCCcccHHHHHHhhcCC-CCccE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD-F--INPDDEPNKSISELVKGITHG-MGVDY  265 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~-v--~~~~~~~~~~~~~~i~~~~~~-~g~d~  265 (375)
                      +++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++... .  .|-.+  .+++.+.+.+.... .++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHhCCCCCE
Confidence            36888988 9999988887778898 9999999988765543 333221 1  23333  23333334333221 26999


Q ss_pred             EEEccC
Q 017201          266 CFECTG  271 (375)
Q Consensus       266 vid~~g  271 (375)
                      +|++.|
T Consensus        78 lvnnAg   83 (248)
T 3asu_A           78 LVNNAG   83 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.70  E-value=0.034  Score=51.36  Aligned_cols=134  Identities=15%  Similarity=0.150  Sum_probs=81.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHHh-hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~-G~~~V~-~~~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -+|.|+|+|.+|...+...+.. ++ +++ ++++++++.+.+ +++|+..   +     .++.+.+.    ..++|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~lvav~d~~~~~~~~~~~~~g~~~---~-----~~~~~~l~----~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKL-KLVTCYSRTEDKREKFGKRYNCAG---D-----ATMEALLA----REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSE-EEEEEECSSHHHHHHHHHHHTCCC---C-----SSHHHHHH----CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCCC---c-----CCHHHHhc----CCCCCEEEE
Confidence            3799999999998777766665 66 655 556777776544 5567643   2     23433332    237999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      ++....+.+.+..++..+  +-+++..+.. ... ....... -.+++.+.-.+  +.++...+..+.+++++|.+-
T Consensus        73 ~tp~~~h~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~--~~R~~p~~~~~k~~i~~g~iG  145 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSG--KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH--SSRRLGALRKMKEMIDTKEIG  145 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC--GGGGSHHHHHHHHHHHTTTTC
T ss_pred             eCChHHHHHHHHHHHHcC--CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee--chhcCHHHHHHHHHHhcCCCC
Confidence            998887888888888874  4455654432 110 1111111 12344443222  233445677888899988773

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.70  E-value=0.046  Score=48.85  Aligned_cols=97  Identities=15%  Similarity=0.160  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC---cEEeCCCCCCcccHHHHHHhhcC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM---TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~---~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .+.++.+||-+|+| .|..+..+++..|+ +|++++.+++..+.+++    .|.   ..++..+-   .++     .. .
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~-~  147 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI-----PC-E  147 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC-----SS-C
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccC-----CC-C
Confidence            77899999999997 57888888888888 99999999988777654    232   12222111   110     11 1


Q ss_pred             CCCccEEEEccCC------hhhHHHHHHhcccCCeEEEEEcc
Q 017201          260 GMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       260 ~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ...||+|+....-      ...+..+.++|+|+ |+++....
T Consensus       148 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          148 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            2369999865432      24688999999997 99887753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.70  E-value=0.026  Score=51.34  Aligned_cols=83  Identities=18%  Similarity=0.185  Sum_probs=49.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC----------hhhHHH----hhhcCCcEEeCCCCCC-cccHHH
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN----------PWKKEK----GKAFGMTDFINPDDEP-NKSISE  252 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~----------~~~~~~----~~~lg~~~v~~~~~~~-~~~~~~  252 (375)
                      -.|+++||+|+ +++|.+.++.+...|+ +|++++++          .++.+.    +++.+....+..-+.. .+++.+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35789999988 9999988777777899 99999876          333332    2334443322111211 122222


Q ss_pred             HHHhhcC-CCCccEEEEccCC
Q 017201          253 LVKGITH-GMGVDYCFECTGV  272 (375)
Q Consensus       253 ~i~~~~~-~~g~d~vid~~g~  272 (375)
                      .+.+... ..++|++|++.|.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            2222211 1169999999973

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.70  E-value=0.081  Score=47.14  Aligned_cols=41  Identities=27%  Similarity=0.351  Sum_probs=35.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      .+|.|+|+|.+|...++.+...|+ +|+..++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999988888888899 99999999988776654

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.70  E-value=0.056  Score=47.53  Aligned_cols=101  Identities=21%  Similarity=0.256  Sum_probs=68.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CC---cEEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GM---TDFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~---~~v~~~~~~~~~~~~~~i  254 (375)
                      +.+..++.++++||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    +.   ..++..+-   .++    
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDL----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccC----
Confidence            44667788999999999975 7788889988887 999999999887776542    32   12222111   110    


Q ss_pred             HhhcCCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEc
Q 017201          255 KGITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       .. ....||+|+....     . ...+..+.++|+++ |+++...
T Consensus       124 -~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~  166 (273)
T 3bus_A          124 -PF-EDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIAD  166 (273)
T ss_dssp             -CS-CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             -CC-CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence             11 1236999975432     1 24678899999997 9888765

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.69  E-value=0.037  Score=49.34  Aligned_cols=34  Identities=26%  Similarity=0.279  Sum_probs=29.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .|+++||+|+ +++|...++.+...|+ +|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999988 9999988888888899 89998876

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.69  E-value=0.03  Score=49.01  Aligned_cols=100  Identities=19%  Similarity=0.233  Sum_probs=67.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc--EEeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT--DFINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~--~v~~~~~~~~~~~~~~i~  255 (375)
                      +......+++.+||-+|+| .|..+..+++.. . +|++++.+++..+.+++.    +..  .++..+-   .++     
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l-----   97 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   97 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhC-----
Confidence            3455677899999999997 577777777764 4 999999999888776542    321  2222111   111     


Q ss_pred             hhcCCCCccEEEEccCC------hhhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .+ ....||+|+....-      ...+..+.+.|+|+ |.++...
T Consensus        98 ~~-~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A           98 PF-TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             CS-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CC-CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            11 22379999876442      24688999999997 9988864

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.68  E-value=0.027  Score=50.26  Aligned_cols=71  Identities=15%  Similarity=0.167  Sum_probs=50.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC---cEEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM---TDFINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~---~~v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      -.+.+++|+|+|++|.+.+..+...|+.+|+++.+++++.+.+ +.++.   ..+....+            +.  .++|
T Consensus       124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------------l~--~~aD  189 (281)
T 3o8q_A          124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------------LK--QSYD  189 (281)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CC--SCEE
T ss_pred             ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------------hc--CCCC
Confidence            3688999999999999888888888977999999999886544 33432   12222111            11  3799


Q ss_pred             EEEEccCCh
Q 017201          265 YCFECTGVP  273 (375)
Q Consensus       265 ~vid~~g~~  273 (375)
                      +||++++..
T Consensus       190 iIInaTp~g  198 (281)
T 3o8q_A          190 VIINSTSAS  198 (281)
T ss_dssp             EEEECSCCC
T ss_pred             EEEEcCcCC
Confidence            999998654

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.68  E-value=0.097  Score=46.87  Aligned_cols=87  Identities=14%  Similarity=0.202  Sum_probs=59.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... .       .+..+.+.      ..|+||.++.
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-~-------~~~~~~~~------~~D~vi~~vp   69 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA-C-------ENNQKVAA------ASDIIFTSLP   69 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE-C-------SSHHHHHH------HCSEEEECCS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee-c-------CCHHHHHh------CCCEEEEECC
Confidence            579999999999987777777788 8999999998888776666431 1       12323222      4799999997


Q ss_pred             ChhhHHHHH-------HhcccCCeEEEEEc
Q 017201          272 VPSLLSEAL-------ETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~-------~~l~~~~G~iv~~g  294 (375)
                      .+..+...+       ..+.++ ..++.++
T Consensus        70 ~~~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           70 NAGIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             SHHHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             CHHHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            665455444       345665 5555554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.68  E-value=0.036  Score=49.52  Aligned_cols=95  Identities=18%  Similarity=0.202  Sum_probs=64.8

Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcc
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK  248 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~  248 (375)
                      .+||+...+...+.+..---.|.+++|+|.| .+|..++.++...|+ +|+++.+...                      
T Consensus       144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~----------------------  200 (300)
T 4a26_A          144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTS----------------------  200 (300)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSC----------------------
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCC----------------------
Confidence            3555544444434333334689999999985 589999999999999 8988875322                      


Q ss_pred             cHH--HHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          249 SIS--ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       249 ~~~--~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++.  +.++      .+|+||.++|.+..+..  ..++++ ..++.+|..
T Consensus       201 ~l~l~~~~~------~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          201 TEDMIDYLR------TADIVIAAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             HHHHHHHHH------TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             Cchhhhhhc------cCCEEEECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            122  2222      58999999998754332  456886 888888855

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.67  E-value=0.012  Score=52.52  Aligned_cols=92  Identities=11%  Similarity=0.014  Sum_probs=57.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.+.+++|+|+|++|.+++..+...|+++|+++.+++++.+.+.+ ... ..        .+ +.+.+..  .++|+||+
T Consensus       115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~-~~--------~~-~~~~~~~--~~aDiVIn  181 (277)
T 3don_A          115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NIN-KI--------NL-SHAESHL--DEFDIIIN  181 (277)
T ss_dssp             GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCE-EE--------CH-HHHHHTG--GGCSEEEE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcc-cc--------cH-hhHHHHh--cCCCEEEE
Confidence            367899999999999999888888998789999999888654432 111 11        11 1222222  25899999


Q ss_pred             ccCCh--hhHH--HHHHhcccCCeEEEEEc
Q 017201          269 CTGVP--SLLS--EALETTKVGKGKVIVIG  294 (375)
Q Consensus       269 ~~g~~--~~~~--~~~~~l~~~~G~iv~~g  294 (375)
                      +++..  +...  .....++++ ..++.+.
T Consensus       182 aTp~Gm~~~~~~~l~~~~l~~~-~~V~D~v  210 (277)
T 3don_A          182 TTPAGMNGNTDSVISLNRLASH-TLVSDIV  210 (277)
T ss_dssp             CCC-------CCSSCCTTCCSS-CEEEESC
T ss_pred             CccCCCCCCCcCCCCHHHcCCC-CEEEEec
Confidence            98643  1100  013446665 6565554

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.66  E-value=0.077  Score=47.01  Aligned_cols=85  Identities=20%  Similarity=0.302  Sum_probs=58.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|.. .+...       .    .+.   .+.|+||-++.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~-------~----~~~---~~~D~vi~av~   66 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQD-------L----SLL---QTAKIIFLCTP   66 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESC-------G----GGG---TTCSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccCC-------H----HHh---CCCCEEEEECC
Confidence            68999999999988887778898 899999999998888777753 22211       1    112   26899999998


Q ss_pred             ChhhHHHHH----HhcccCCeEEEEEc
Q 017201          272 VPSLLSEAL----ETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~----~~l~~~~G~iv~~g  294 (375)
                      .. .+...+    ..++++ ..++.++
T Consensus        67 ~~-~~~~~~~~l~~~~~~~-~~vv~~~   91 (279)
T 2f1k_A           67 IQ-LILPTLEKLIPHLSPT-AIVTDVA   91 (279)
T ss_dssp             HH-HHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             HH-HHHHHHHHHHhhCCCC-CEEEECC
Confidence            65 333333    334554 5665553

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.66  E-value=0.037  Score=48.28  Aligned_cols=76  Identities=17%  Similarity=0.285  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      .+.++||+|+ |++|...++.+...|+ +|++++++++.    ++.+...+ .|-.+  .+++.+.+.+... ..++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD--AAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC--HHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4688999998 9999998888888899 99999987653    22343222 23333  2233333332211 1269999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.65  E-value=0.029  Score=48.96  Aligned_cols=100  Identities=20%  Similarity=0.114  Sum_probs=68.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      +.......++.+||-+|+| .|..+..+++.. +. +|++++.+++..+.+++... ..++..+-   .+       +..
T Consensus        25 l~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~~-------~~~   92 (259)
T 2p35_A           25 LLAQVPLERVLNGYDLGCG-PGNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL---AT-------WKP   92 (259)
T ss_dssp             HHTTCCCSCCSSEEEETCT-TTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT---TT-------CCC
T ss_pred             HHHhcCCCCCCEEEEecCc-CCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh---hh-------cCc
Confidence            4455667889999999997 477788888876 55 99999999998888876422 12222111   11       112


Q ss_pred             CCCccEEEEccCC------hhhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...||+|+....-      ...+..+.+.|+++ |.++..-
T Consensus        93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  132 (259)
T 2p35_A           93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM  132 (259)
T ss_dssp             SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            3379999875531      23577888999997 9887764

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.64  E-value=0.097  Score=46.41  Aligned_cols=91  Identities=22%  Similarity=0.265  Sum_probs=60.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .+|.|+|+|.+|.+.++.++..|.. +|++.++++++.+.++++|... ....       ..    +.... +.|+||.+
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~-------~~----~~~~~-~aDvVila   69 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS-------IA----KVEDF-SPDFVMLS   69 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC-------GG----GGGGT-CCSEEEEC
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCC-------HH----HHhcC-CCCEEEEc
Confidence            3689999999999888887777752 6999999999988888888642 2211       11    11111 58999999


Q ss_pred             cCChhh---HHHHHHhcccCCeEEEEEcc
Q 017201          270 TGVPSL---LSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       270 ~g~~~~---~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +.....   +......++++ ..++.++.
T Consensus        70 vp~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CCHHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            976532   23333456665 66666543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.64  E-value=0.024  Score=50.59  Aligned_cols=41  Identities=20%  Similarity=0.193  Sum_probs=35.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      .|.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            4789999998 9999998888888899 899999998876543

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.64  E-value=0.065  Score=49.26  Aligned_cols=133  Identities=11%  Similarity=0.114  Sum_probs=82.5

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCeEEEE-cCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGLG-AVDGARMH-GAAKIIGI-DKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~~-ai~la~~~-G~~~V~~~-~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|.. .+...+.. ++ +++++ ++++++.+ .++++|...++.       ++.+.+.    ...+|+|+-
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~-------d~~ell~----~~~iDaV~I   92 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFG-------SYEEMLA----SDVIDAVYI   92 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEES-------SHHHHHH----CSSCSEEEE
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeC-------CHHHHhc----CCCCCEEEE
Confidence            7999999999975 35555554 66 77654 56666654 456788766653       3333332    237999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccc-hHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPL-NVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  341 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (375)
                      ++....+.+.+..+|..  |+=|++..+.. ..... ..... -.+++.+.-.+  ..++...+..+.+++++|.|
T Consensus        93 ~tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~--~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           93 PLPTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAY--MITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             eCCCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEee--eeecCHHHHHhhHhhhcCCC
Confidence            99888788899999987  46677876643 11111 11111 12344433222  23334567788899999876

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.63  E-value=0.03  Score=49.20  Aligned_cols=79  Identities=16%  Similarity=0.135  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .++++||+|+ |++|...++.+...|+ +|+.+ .+++++.+.+    ++.+....   .|-.+  .+++.+.+.+... 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ--PAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999998888888899 88876 7777665443    23343321   23332  1223332322211 


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      ..++|++|++.|
T Consensus        80 ~g~id~lv~nAg   91 (258)
T 3oid_A           80 FGRLDVFVNNAA   91 (258)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            126999999997

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.63  E-value=0.013  Score=50.30  Aligned_cols=97  Identities=16%  Similarity=0.110  Sum_probs=67.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +.++.+||-+|+|. |..+..+++. |+ +|++++.+++..+.+++... ..++..+-   .+   . ........||+|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~---~-~~~~~~~~fD~v  115 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNG---KG---E-LPAGLGAPFGLI  115 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCS---CS---S-CCTTCCCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcch---hh---c-cCCcCCCCEEEE
Confidence            47889999999874 7777788877 77 99999999998888876422 12221111   00   0 011102379999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +....-...+..+.+.|+|+ |+++..+.
T Consensus       116 ~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (226)
T 3m33_A          116 VSRRGPTSVILRLPELAAPD-AHFLYVGP  143 (226)
T ss_dssp             EEESCCSGGGGGHHHHEEEE-EEEEEEES
T ss_pred             EeCCCHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            98766666788999999997 99985543

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.63  E-value=0.021  Score=48.10  Aligned_cols=97  Identities=16%  Similarity=0.168  Sum_probs=64.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC----cEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----TDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      +.++++||-+|+|. |..+..+++. |..+|++++.+++..+.+++...    ..++..+-   .++     ... ...+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~-----~~~-~~~f  108 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKL-----DFP-SASF  108 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSC-----CSC-SSCE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcC-----CCC-CCcc
Confidence            47899999999975 7777788876 44489999999988888765321    11221111   111     112 2369


Q ss_pred             cEEEEccCC---------------------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          264 DYCFECTGV---------------------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       264 d~vid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      |+|+....-                     ...+..+.+.|+++ |+++.....
T Consensus       109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~  161 (215)
T 2pxx_A          109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSA  161 (215)
T ss_dssp             EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCC
Confidence            999863211                     34678889999997 998887543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.63  E-value=0.023  Score=50.00  Aligned_cols=79  Identities=19%  Similarity=0.178  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHh----hhcCC--cEE-eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKG----KAFGM--TDF-INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~-~G~~~V~~~~~~~~~~~~~----~~lg~--~~v-~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      ++.+|||+|+ |.+|...++.+.. .|+ +|++++++.++.+.+    +..+.  ..+ .|-.+  .+++.+.+.++.. 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   79 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHh
Confidence            5788999988 9999987766666 898 999999987765433    22232  211 23322  1233332322211 


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      ..++|++|++.|
T Consensus        80 ~g~id~li~~Ag   91 (276)
T 1wma_A           80 YGGLDVLVNNAG   91 (276)
T ss_dssp             HSSEEEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            116999999987

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.62  E-value=0.019  Score=50.61  Aligned_cols=101  Identities=15%  Similarity=0.036  Sum_probs=64.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE--eCCCCCCcccHHHHHHhhcC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      +....++.++++||=+|+| .|..++.+++. |+ +|++++.+++-.+.+++.-....  .+..+   .+.  ...... 
T Consensus        37 il~~l~l~~g~~VLDlGcG-tG~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~---~~~--~~~~~~-  107 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAS-TRFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLD---ITA--EIPKEL-  107 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTT-CHHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECC---TTS--CCCGGG-
T ss_pred             HHHhcCCCCcCEEEEEeCc-chHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeee---ccc--cccccc-
Confidence            3456678999999999997 48888888875 66 99999999998888875322111  11111   000  000001 


Q ss_pred             CCCccEEEEccCC----h----hhHHHHHHhcccCCeEEEEE
Q 017201          260 GMGVDYCFECTGV----P----SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       260 ~~g~d~vid~~g~----~----~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ...||+|+-+..-    .    ..+....+++ |+ |+++..
T Consensus       108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            2269999865421    1    2566777888 97 887754

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.62  E-value=0.045  Score=49.40  Aligned_cols=98  Identities=16%  Similarity=0.022  Sum_probs=64.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC---------C-cEEeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---------M-TDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---------~-~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-         . -.++.      .+..+.+...
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~~~~~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV------GDGLAFVRQT  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHSS
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHHhc
Confidence            46778999998864 667777887765559999999988877776421         0 11221      2333333321


Q ss_pred             cCCCCccEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      . ...||+|+-....          .+.+..+.+.|+++ |.++...
T Consensus       166 ~-~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  210 (304)
T 3bwc_A          166 P-DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQG  210 (304)
T ss_dssp             C-TTCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             c-CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            2 3379998754321          34678899999997 9988764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.60  E-value=0.048  Score=48.77  Aligned_cols=80  Identities=14%  Similarity=0.145  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCChhhHHHhhh-c-----CCcE---EeCCCCCCcccHHHHHHhh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGA--AKIIGIDKNPWKKEKGKA-F-----GMTD---FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~--~~V~~~~~~~~~~~~~~~-l-----g~~~---v~~~~~~~~~~~~~~i~~~  257 (375)
                      .|+++||+|+ |++|...++.+...|+  .+|+.++++.++.+.+.+ +     +...   ..|-.+  .+++.+.+.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~  109 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ--AEKIKPFIENL  109 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC--GGGHHHHHHTS
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHH
Confidence            4789999988 9999976655444443  289999999887765432 1     3222   123333  24454444443


Q ss_pred             cCC-CCccEEEEccC
Q 017201          258 THG-MGVDYCFECTG  271 (375)
Q Consensus       258 ~~~-~g~d~vid~~g  271 (375)
                      ... .++|++|++.|
T Consensus       110 ~~~~g~iD~lVnnAG  124 (287)
T 3rku_A          110 PQEFKDIDILVNNAG  124 (287)
T ss_dssp             CGGGCSCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            322 26999999987

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.58  E-value=0.069  Score=49.05  Aligned_cols=89  Identities=19%  Similarity=0.302  Sum_probs=62.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.++++.+.+...  ++..+        .++.+.+.      ..|+|+-+
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~--------~~l~ell~------~sDvV~l~  234 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH--------DTLDSLLG------ASDIFLIA  234 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC--------SSHHHHHH------TCSEEEEC
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe--------CCHHHHHh------hCCEEEEe
Confidence            57899999999999999999999999 9999998765544332  44321        12333322      47999888


Q ss_pred             cCCh-h---hH-HHHHHhcccCCeEEEEEccC
Q 017201          270 TGVP-S---LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g~~-~---~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +... +   .+ ...+..++++ ..++.++..
T Consensus       235 ~Plt~~T~~li~~~~l~~mk~g-ailIN~aRG  265 (345)
T 4g2n_A          235 APGRPELKGFLDHDRIAKIPEG-AVVINISRG  265 (345)
T ss_dssp             SCCCGGGTTCBCHHHHHHSCTT-EEEEECSCG
T ss_pred             cCCCHHHHHHhCHHHHhhCCCC-cEEEECCCC
Confidence            8632 1   12 4677888887 888887633

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.58  E-value=0.051  Score=49.91  Aligned_cols=76  Identities=22%  Similarity=0.274  Sum_probs=50.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhh-c---CCcEE-eCCCCCCcccHHHHHHhhcCCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKA-F---GMTDF-INPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~-l---g~~~v-~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      -.+.+|||+|+ |.+|...++.+... |+.+|+++++++++.+.+.+ +   +...+ .|-.+   .+   .+.+...  
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d---~~---~l~~~~~--   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD---LE---RLNYALE--   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC---HH---HHHHHTT--
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC---HH---HHHHHHh--
Confidence            34689999998 99999877777766 86589999998877654432 2   22222 23332   22   2333332  


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|+||++++.
T Consensus        91 ~~D~Vih~Aa~  101 (344)
T 2gn4_A           91 GVDICIHAAAL  101 (344)
T ss_dssp             TCSEEEECCCC
T ss_pred             cCCEEEECCCC
Confidence            69999999874

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.57  E-value=0.099  Score=49.06  Aligned_cols=107  Identities=19%  Similarity=0.202  Sum_probs=69.5

Q ss_pred             hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-----------hcCC--cE--EeCCCCC
Q 017201          181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-----------AFGM--TD--FINPDDE  245 (375)
Q Consensus       181 ~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-----------~lg~--~~--v~~~~~~  245 (375)
                      .+....++++|++||=+|+| .|..++++|+..|+.+|++++.+++-.++++           .+|.  ..  ++..+- 
T Consensus       164 ~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~-  241 (438)
T 3uwp_A          164 QMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-  241 (438)
T ss_dssp             HHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT-
T ss_pred             HHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc-
Confidence            35567789999999999997 4888889998889867999999976544443           2342  22  232221 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccC--Ch---hhHHHHHHhcccCCeEEEEEccC
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTG--VP---SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g--~~---~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .+..+...+      ..+|+|+-..-  .+   ..+...++.|+++ |+++.+...
T Consensus       242 ~~lp~~d~~------~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f  290 (438)
T 3uwp_A          242 LSEEWRERI------ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF  290 (438)
T ss_dssp             TSHHHHHHH------HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred             cCCcccccc------CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence            112221111      15899884321  11   3566788999997 999987544

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.57  E-value=0.045  Score=49.81  Aligned_cols=72  Identities=19%  Similarity=0.193  Sum_probs=47.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+. |-.+   .+   .+.+...  ++|+||++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d---~~---~~~~~~~--~~d~vih~   84 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEMLD---HA---GLERALR--GLDGVIFS   84 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTTC---HH---HHHHHTT--TCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCCC---HH---HHHHHHc--CCCEEEEC
Confidence            48999998 9999998888888898 999999987766544443444332 3222   22   2333332  59999999


Q ss_pred             cCC
Q 017201          270 TGV  272 (375)
Q Consensus       270 ~g~  272 (375)
                      .+.
T Consensus        85 a~~   87 (342)
T 2x4g_A           85 AGY   87 (342)
T ss_dssp             ---
T ss_pred             Ccc
Confidence            873

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=95.57  E-value=0.048  Score=49.61  Aligned_cols=132  Identities=12%  Similarity=0.086  Sum_probs=76.9

Q ss_pred             EEEEECCCHHHH-HHHHHHHHc-CCCeEEEEcCChhhHHH-hhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGL-GAVDGARMH-GAAKIIGIDKNPWKKEK-GKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~-~ai~la~~~-G~~~V~~~~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|. ..+...+.. ++ +++++++++++.+. ++++|... +.+..     +   .   +  ..++|+|+.
T Consensus         4 ~igiIG~G~ig~~~~~~~l~~~~~~-~l~v~d~~~~~~~~~a~~~g~~~~~~~~~-----~---~---l--~~~~D~V~i   69 (323)
T 1xea_A            4 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCTDYR-----D---V---L--QYGVDAVMI   69 (323)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCSSTT-----G---G---G--GGCCSEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHcCCCccccCHH-----H---H---h--hcCCCEEEE
Confidence            689999999997 355544443 66 67788888887764 45677643 22211     1   1   1  127999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-cc-ccchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AM-VPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      ++....+.+.+..++..+  +-+.+..+.. .. .......+ -.+++.+.-.+  ..++...+..+.+++++|.+-
T Consensus        70 ~tp~~~h~~~~~~al~~G--k~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  142 (323)
T 1xea_A           70 HAATDVHSTLAAFFLHLG--IPTFVDKPLAASAQECENLYELAEKHHQPLYVGF--NRRHIPLYNQHLSELAQQECG  142 (323)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC--GGGCCHHHHHHCHHHHHTSCT
T ss_pred             ECCchhHHHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEee--ccccCHHHHHHHHHHhcCCcC
Confidence            998876777888888774  4444544321 00 00111112 12455443322  223334567778888888763

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.57  E-value=0.044  Score=48.67  Aligned_cols=81  Identities=21%  Similarity=0.237  Sum_probs=50.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHHh----hhcCCcEE---eCCCCCCc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-------------NPWKKEKG----KAFGMTDF---INPDDEPN  247 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-------------~~~~~~~~----~~lg~~~v---~~~~~~~~  247 (375)
                      -.|+++||+|+ +++|...++.+...|+ +|+++++             ++++.+.+    ++.+....   .|-.+  .
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~   89 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD--D   89 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--H
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--H
Confidence            46789999988 9999988888888899 8999887             44544433    23343221   23333  2


Q ss_pred             ccHHHHHHhhcC-CCCccEEEEccCC
Q 017201          248 KSISELVKGITH-GMGVDYCFECTGV  272 (375)
Q Consensus       248 ~~~~~~i~~~~~-~~g~d~vid~~g~  272 (375)
                      +++.+.+.+... -.++|++|++.|.
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            233333322211 1169999999873

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.56  E-value=0.0077  Score=53.25  Aligned_cols=76  Identities=12%  Similarity=0.056  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcC-CCCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~-~~g~d~vi  267 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++. ..+.+.  ...|-.+  .++....+.+... -.++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~~--~~~Dv~~--~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEELF--VEADLTT--KEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTTE--EECCTTS--HHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEEE--EEcCCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            6899999988 9999998888889999 999999875431 111111  1123222  1233322222221 12699999


Q ss_pred             EccC
Q 017201          268 ECTG  271 (375)
Q Consensus       268 d~~g  271 (375)
                      ++.|
T Consensus        84 nnAG   87 (261)
T 4h15_A           84 HMLG   87 (261)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9876

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.56  E-value=0.046  Score=48.83  Aligned_cols=74  Identities=18%  Similarity=0.226  Sum_probs=50.1

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc----CCcE-EeCCCCCCcccHHHHHHhhcCCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMTD-FINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g~~~-v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      -+|.++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ++    +... ..|..+   .+   .+.+...  
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~---~~---~~~~~~~--  187 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---DA---SRAEAVK--  187 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---HH---HHHHHTT--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC---HH---HHHHHHH--
Confidence            46889999995 9999998888888899 7999999887765432 22    2221 223322   11   2223222  


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      .+|++|++++
T Consensus       188 ~~DvlVn~ag  197 (287)
T 1lu9_A          188 GAHFVFTAGA  197 (287)
T ss_dssp             TCSEEEECCC
T ss_pred             hCCEEEECCC
Confidence            4899999996

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.56  E-value=0.014  Score=50.92  Aligned_cols=76  Identities=16%  Similarity=0.166  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcC-CCCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~-~~g~d~vi  267 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.  +  ...|-.+  .+++.+.+.+... ..++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~--~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            5688999988 9999988888888898 8999998876654332  1  2233333  1223332322211 12689999


Q ss_pred             EccCC
Q 017201          268 ECTGV  272 (375)
Q Consensus       268 d~~g~  272 (375)
                      ++.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.56  E-value=0.031  Score=49.54  Aligned_cols=78  Identities=10%  Similarity=0.144  Sum_probs=50.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC----CcEE-eCCCCCCcccHHHHHHhhcCC-CCc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG----MTDF-INPDDEPNKSISELVKGITHG-MGV  263 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg----~~~v-~~~~~~~~~~~~~~i~~~~~~-~g~  263 (375)
                      +++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++.    +..+ .|-.+  .+++.+.+.+.... .++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD--RAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHhCCC
Confidence            68999988 9999988888778899 9999999988765543 222    1111 23333  22333333333221 258


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        99 D~lvnnAG~  107 (272)
T 2nwq_A           99 RGLINNAGL  107 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.55  E-value=0.021  Score=52.01  Aligned_cols=43  Identities=30%  Similarity=0.324  Sum_probs=35.6

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      ..++.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~   51 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANL   51 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHH
Confidence            346789999998 9999988888877898 999999988776544

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.54  E-value=0.04  Score=48.83  Aligned_cols=95  Identities=19%  Similarity=0.186  Sum_probs=64.7

Q ss_pred             cccchhhhhhhhhhhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCccc
Q 017201          171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS  249 (375)
Q Consensus       171 l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~  249 (375)
                      +||+...+...+.+..---.|.+++|+|.| .+|..++.++...|+ +|+++.+..                      .+
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t----------------------~~  196 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT----------------------KD  196 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------SC
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc----------------------hh
Confidence            454444444433333334589999999985 589999999999999 888886432                      12


Q ss_pred             HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +.+.++      ..|+||.++|.+..+..  ..++++ ..++.+|...
T Consensus       197 L~~~~~------~ADIVI~Avg~p~~I~~--~~vk~G-avVIDVgi~~  235 (285)
T 3p2o_A          197 LSLYTR------QADLIIVAAGCVNLLRS--DMVKEG-VIVVDVGINR  235 (285)
T ss_dssp             HHHHHT------TCSEEEECSSCTTCBCG--GGSCTT-EEEEECCCEE
T ss_pred             HHHHhh------cCCEEEECCCCCCcCCH--HHcCCC-eEEEEeccCc
Confidence            333332      58999999998744332  556886 8888888654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.54  E-value=0.0067  Score=53.82  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=49.4

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      ....|++|||+|+ +++|.+.++.+...|+ +|+++++++++...    .... ..|-.+  .++..+.+.+... -.++
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----VSDHFKIDVTN--EEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----SSEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----ceeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4567899999988 9999988888778899 89999987765421    1211 123333  1233333322211 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        83 D~lv~nAg~   91 (269)
T 3vtz_A           83 DILVNNAGI   91 (269)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.53  E-value=0.017  Score=50.09  Aligned_cols=39  Identities=23%  Similarity=0.237  Sum_probs=32.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      ..+.++||+|+ |++|...++.+...|+ +|+++++++++.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~   44 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEE   44 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhc
Confidence            45789999988 9999988888888898 899999887654

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=95.52  E-value=0.061  Score=48.73  Aligned_cols=135  Identities=15%  Similarity=0.202  Sum_probs=80.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhc-CCCCccEEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIG-IDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT-HGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~-~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~-~~~g~d~vid  268 (375)
                      -+|.|+|+ |.+|...+...+..+. ++++ +++++++....+.++...++..-    +++.+.+.++. ....+|+|+-
T Consensus         4 irvgiIG~gG~i~~~h~~~l~~~~~-~lvav~d~~~~~~~~~~~~~~~~~~~~~----~~ll~~~~~l~~~~~~vD~V~I   78 (312)
T 3o9z_A            4 TRFALTGLAGYIAPRHLKAIKEVGG-VLVASLDPATNVGLVDSFFPEAEFFTEP----EAFEAYLEDLRDRGEGVDYLSI   78 (312)
T ss_dssp             CEEEEECTTSSSHHHHHHHHHHTTC-EEEEEECSSCCCGGGGGTCTTCEEESCH----HHHHHHHHHHHHTTCCCSEEEE
T ss_pred             eEEEEECCChHHHHHHHHHHHhCCC-EEEEEEcCCHHHHHHHhhCCCCceeCCH----HHHHHHhhhhcccCCCCcEEEE
Confidence            37899999 6799888887777787 5554 45566664444445444444221    22322211211 3348999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHH---h---h-cCCceEEEEeeccccCCCCHHHHHHHHHcC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA---L---A-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNK  339 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~---~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (375)
                      ++....+.+.+..+|..+  +=|.+..+..    .+...   +   . .+++.+.-..  ..+....+..+.+++++|
T Consensus        79 ~tP~~~H~~~~~~al~aG--khVl~EKPla----~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~g  148 (312)
T 3o9z_A           79 ASPNHLHYPQIRMALRLG--ANALSEKPLV----LWPEEIARLKELEARTGRRVYTVL--QLRVHPSLLALKERLGQE  148 (312)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CEEEECSSSC----SCHHHHHHHHHHHHHHCCCEEECC--GGGGCHHHHHHHHHHHTC
T ss_pred             CCCchhhHHHHHHHHHCC--CeEEEECCCC----CCHHHHHHHHHHHHHcCCEEEEEe--ehhcCHHHHHHHHHHHcC
Confidence            998887888899999875  5566765532    22211   1   1 2344433221  233344567788888887

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.52  E-value=0.044  Score=48.75  Aligned_cols=81  Identities=17%  Similarity=0.162  Sum_probs=50.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ..+.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+... +  .|-.+  .+++.+.+.+...
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  103 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD--LSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS--GGGHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHH
Confidence            45789999988 9999988888888899 8988885 55554332    2334322 1  23333  2333333333221


Q ss_pred             C-CCccEEEEccCC
Q 017201          260 G-MGVDYCFECTGV  272 (375)
Q Consensus       260 ~-~g~d~vid~~g~  272 (375)
                      . .++|++|++.|.
T Consensus       104 ~~g~iD~lvnnAg~  117 (280)
T 4da9_A          104 EFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHSCCCEEEEECC-
T ss_pred             HcCCCCEEEECCCc
Confidence            1 169999999975

>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*

Probab=95.51  E-value=0.047  Score=48.60  Aligned_cols=96  Identities=18%  Similarity=0.124  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC---cEEeCCCCCCcccHHHHHHhhcC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM---TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~---~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .+++|++||=.|+| +|..++.+|+...+ +|++++.+++..+++++    .+.   ..+++.+.          +++..
T Consensus       122 ~~~~g~~VlD~~aG-~G~~~i~~a~~g~~-~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~----------~~~~~  189 (278)
T 3k6r_A          122 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN----------RDFPG  189 (278)
T ss_dssp             HCCTTCEEEETTCT-TTTTTHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT----------TTCCC
T ss_pred             hcCCCCEEEEecCc-CcHHHHHHHHhcCC-eEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcH----------HHhcc
Confidence            36899999998774 24455666666444 99999999998887753    233   22444332          12223


Q ss_pred             CCCccEEEEcc--CChhhHHHHHHhcccCCeEEEEEcc
Q 017201          260 GMGVDYCFECT--GVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       260 ~~g~d~vid~~--g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ...+|.|+-..  .+.+.+..++++++++ |.++.+..
T Consensus       190 ~~~~D~Vi~~~p~~~~~~l~~a~~~lk~g-G~ih~~~~  226 (278)
T 3k6r_A          190 ENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHNT  226 (278)
T ss_dssp             CSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccCCCEEEECCCCcHHHHHHHHHHHcCCC-CEEEEEee
Confidence            33689765432  3445789999999997 98876653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.51  E-value=0.037  Score=49.54  Aligned_cols=41  Identities=12%  Similarity=0.079  Sum_probs=34.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKG  231 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~~~~  231 (375)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            4678999988 9999988888888899 899999 888776543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.50  E-value=0.047  Score=49.55  Aligned_cols=79  Identities=13%  Similarity=0.037  Sum_probs=47.1

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH--HHhhhc----CCcEE-eCCCCCCcccHHHHHHhhc
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK--EKGKAF----GMTDF-INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~--~~~~~l----g~~~v-~~~~~~~~~~~~~~i~~~~  258 (375)
                      .-+++.+|||+|+ |.+|...++.+...|+ +|+++++++++.  ..++.+    +...+ .|-.+  .+.+.+.+... 
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~-   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD--ACSVQRAVIKA-   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC--HHHHHHHHHHH-
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC--HHHHHHHHHHc-
Confidence            4578899999998 9999998888888898 999999876542  222222    22222 23222  12222333221 


Q ss_pred             CCCCccEEEEccCC
Q 017201          259 HGMGVDYCFECTGV  272 (375)
Q Consensus       259 ~~~g~d~vid~~g~  272 (375)
                         ++|+||++.+.
T Consensus        86 ---~~d~Vih~A~~   96 (335)
T 1rpn_A           86 ---QPQEVYNLAAQ   96 (335)
T ss_dssp             ---CCSEEEECCSC
T ss_pred             ---CCCEEEECccc
Confidence               58999999874

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.50  E-value=0.036  Score=48.48  Aligned_cols=99  Identities=15%  Similarity=0.112  Sum_probs=64.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHHhhcCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ..++.+||=+|+|+ |..++.+|+.....+|++++.+++..+.+++    +|..  .++..      +..+.........
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~------d~~~~~~~~~~~~  150 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG------RAEVLAREAGHRE  150 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC------CHHHHTTSTTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC------cHHHhhcccccCC
Confidence            46788999998863 6677777877644499999999998887753    4543  23322      2222111001123


Q ss_pred             CccEEEEccCC--hhhHHHHHHhcccCCeEEEEEc
Q 017201          262 GVDYCFECTGV--PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       262 g~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .||+|+-..-.  ...++.+.++|+++ |+++.+-
T Consensus       151 ~fD~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~  184 (249)
T 3g89_A          151 AYARAVARAVAPLCVLSELLLPFLEVG-GAAVAMK  184 (249)
T ss_dssp             CEEEEEEESSCCHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CceEEEECCcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence            79999865432  24567788999997 9988764

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.50  E-value=0.073  Score=49.03  Aligned_cols=134  Identities=15%  Similarity=0.149  Sum_probs=80.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH--GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~--G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      -+|.|+|+|.+|...+...+..  ++ +++ ++++++++.+. ++++|+ .++.       ++.+.+.+    .++|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~~~~~~~-~~~~-------~~~~ll~~----~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRA-ELIDVCDIDPAALKAAVERTGA-RGHA-------SLTDMLAQ----TDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHHCC-EEES-------CHHHHHHH----CCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCe-EEEEEEcCCHHHHHHHHHHcCC-ceeC-------CHHHHhcC----CCCCEEE
Confidence            4799999999998766666655  66 655 56777777654 456776 3332       34333332    2699999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccCCC-c-cccchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVD-A-MVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      .++....+.+.+..++..+  +-+.+..+.. . ......... -.+++.+.-.+  ..++...+..+.+++++|.+-
T Consensus        81 i~tp~~~h~~~~~~al~~g--k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  154 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAG--FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVK--QNRRNATLQLLKRAMQEKRFG  154 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTTC
T ss_pred             ECCCcHHHHHHHHHHHHCC--CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEE--cccCCHHHHHHHHHHhcCCCC
Confidence            9998877788888888874  5566665432 1 001111111 12344433211  233344577888899988874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.49  E-value=0.081  Score=46.29  Aligned_cols=35  Identities=26%  Similarity=0.324  Sum_probs=30.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus        27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45799999999999998888889999889888754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.49  E-value=0.031  Score=49.81  Aligned_cols=80  Identities=19%  Similarity=0.213  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  .+.+.+.+.+... .
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC--HHHHHHHHHHHHHhc
Confidence            4678999988 9999988887777898 899988887765543    2234322 1  23333  2233333332211 1


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus       120 ~~id~li~~Ag~  131 (285)
T 2c07_A          120 KNVDILVNNAGI  131 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.49  E-value=0.036  Score=50.35  Aligned_cols=35  Identities=23%  Similarity=0.230  Sum_probs=29.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      -.|+++||+|+ |++|...++.+...|+ +|++++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~   79 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLC   79 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecc
Confidence            46789999988 9999988888888899 89998765

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.48  E-value=0.032  Score=49.82  Aligned_cols=39  Identities=13%  Similarity=0.110  Sum_probs=32.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKE  229 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~  229 (375)
                      .|.++||+|+ |++|.+.++.+...|+ +|+++++++ ++.+
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~   62 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAV   62 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHH
Confidence            4678999988 9999988887777899 899999887 6554

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.48  E-value=0.084  Score=50.45  Aligned_cols=93  Identities=14%  Similarity=0.074  Sum_probs=57.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE--eCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF--INPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v--~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      +.+|+|+|+|.+|...++.+...|+ +|+++++++++.+.+. .++....  ++..+  .+++    .+...  ++|+|+
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d--~~~l----~~~l~--~~DvVI   73 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND--DAAL----DAEVA--KHDLVI   73 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC--HHHH----HHHHT--TSSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC--HHHH----HHHHc--CCcEEE
Confidence            5789999999999988887778898 8999999988776543 3432112  23322  1122    22222  699999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEE
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ++++.......+..++.++ ..++..
T Consensus        74 n~a~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           74 SLIPYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             ECCC--CHHHHHHHHHHHT-CEEEES
T ss_pred             ECCccccchHHHHHHHhCC-CeEEEe
Confidence            9998542323344555654 444443

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.48  E-value=0.047  Score=48.86  Aligned_cols=45  Identities=20%  Similarity=0.277  Sum_probs=37.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      +.++.+||-+|+|. |..++.+++..+..+|++++.++.-.+.+++
T Consensus        44 ~~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~   88 (292)
T 3g07_A           44 WFRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQ   88 (292)
T ss_dssp             GTTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred             hcCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            34789999999974 7888899998865599999999887777654

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.48  E-value=0.062  Score=49.32  Aligned_cols=134  Identities=15%  Similarity=0.176  Sum_probs=80.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|.|+|+|.+|...+..++.. ++ +++ ++++++++.+. +++++...++.       ++.+.+.    ...+|+|+.+
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~~-------~~~~ll~----~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAYK-------DPHELIE----DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEES-------SHHHHHH----CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCceeC-------CHHHHhc----CCCCCEEEEc
Confidence            689999999998766555544 56 666 45777777654 45677654442       3333332    2379999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      +....+.+.+..++..+  +-+.+..+.. ... ......+ -.+++.+.-.+  +.++...+..+.+++++|.+-
T Consensus        72 tp~~~h~~~~~~al~~g--k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAK--KHVFCEKPLSLNLADVDRMIEETKKADVILFTGF--NRRFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             CCCcchHHHHHHHHhcC--CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEee--cccCCHHHHHHHHHHHcCCCC
Confidence            98887788888888875  4455654431 110 1111111 12344443222  233445677888999988764

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.47  E-value=0.08  Score=48.45  Aligned_cols=88  Identities=19%  Similarity=0.138  Sum_probs=62.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.  ++++ +..    .    .++.+.+.      ..|+|+.+
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~~----~----~~l~ell~------~aDvV~l~  206 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GYY----V----DSLDDLYK------QADVISLH  206 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TCB----C----SCHHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Cee----c----CCHHHHHh------hCCEEEEc
Confidence            57899999999999999999999999 999999887664  2332 221    1    12333222      47999998


Q ss_pred             cCChhh----H-HHHHHhcccCCeEEEEEccC
Q 017201          270 TGVPSL----L-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g~~~~----~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +...+.    + ...+..++++ +.++.++..
T Consensus       207 ~p~~~~t~~li~~~~l~~mk~g-a~lIn~arg  237 (333)
T 1j4a_A          207 VPDVPANVHMINDESIAKMKQD-VVIVNVSRG  237 (333)
T ss_dssp             SCCCGGGTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCCcHHHHHHHhHHHHhhCCCC-cEEEECCCC
Confidence            864321    2 3567888987 888888643

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=95.47  E-value=0.13  Score=43.48  Aligned_cols=100  Identities=18%  Similarity=0.106  Sum_probs=63.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH----HHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK----EKGKAFGMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~----~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ..+++|++||=+|+|+ |..+..+++..+..+|++++.+++..    +.++.......+..+.   .+... .... . .
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~---~~~~~-~~~~-~-~  125 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKPWK-YSGI-V-E  125 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCGGG-TTTT-C-C
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCC---CCchh-hccc-c-c
Confidence            5678999999999974 77888888887533899999998743    2333332222222211   11100 0011 2 3


Q ss_pred             CccEEEEccCChh----hHHHHHHhcccCCeEEEEE
Q 017201          262 GVDYCFECTGVPS----LLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       262 g~d~vid~~g~~~----~~~~~~~~l~~~~G~iv~~  293 (375)
                      .||+|+-....+.    .+..+.+.|+++ |+++..
T Consensus       126 ~fD~V~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~i~  160 (210)
T 1nt2_A          126 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  160 (210)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceeEEEEeccChhHHHHHHHHHHHHhCCC-CEEEEE
Confidence            6999987654332    257788999997 998876

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.47  E-value=0.043  Score=48.06  Aligned_cols=79  Identities=8%  Similarity=0.105  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH---cCCCeEEEEcCChhhHHHhh-hc-----CCcE-E--eCCCCCCcccHHHHHHh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARM---HGAAKIIGIDKNPWKKEKGK-AF-----GMTD-F--INPDDEPNKSISELVKG  256 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~---~G~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~~i~~  256 (375)
                      .+.++||+|+ |++|...++.+..   .|+ +|+++++++++.+.+. ++     +... .  .|-.+  .+++.+.+.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~   81 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT--EAGVQRLLSA   81 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS--HHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC--HHHHHHHHHH
Confidence            3678899988 9999976666655   798 9999999987765432 22     3222 1  23333  2333333333


Q ss_pred             hcC---CCCcc--EEEEccC
Q 017201          257 ITH---GMGVD--YCFECTG  271 (375)
Q Consensus       257 ~~~---~~g~d--~vid~~g  271 (375)
                      ...   ...+|  ++|++.|
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCC
T ss_pred             HHhccccccCCccEEEECCc
Confidence            322   12578  9999886

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.46  E-value=0.011  Score=52.13  Aligned_cols=94  Identities=24%  Similarity=0.366  Sum_probs=64.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMH---GAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~---G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~~  257 (375)
                      +++|.+||-+|+|. |..+..+++..   |+ +|++++.+++-.+.+++    .+..   .++..+          +.++
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D----------~~~~  135 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD----------IRDI  135 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC----------TTTC
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc----------cccc
Confidence            78999999999973 77788888875   56 89999999987777653    3321   122111          1122


Q ss_pred             cCCCCccEEEEccCC----h----hhHHHHHHhcccCCeEEEEEcc
Q 017201          258 THGMGVDYCFECTGV----P----SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       258 ~~~~g~d~vid~~g~----~----~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .. ..+|+|+-...-    +    ..+....+.|+|+ |+++....
T Consensus       136 ~~-~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          136 AI-ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             CC-CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cc-cccccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            22 268888764431    1    2578899999998 99887643

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.45  E-value=0.071  Score=43.84  Aligned_cols=101  Identities=16%  Similarity=0.110  Sum_probs=67.7

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc----EEeCCCCCCcccHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT----DFINPDDEPNKSISEL  253 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~----~v~~~~~~~~~~~~~~  253 (375)
                      +.+....+++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++.    +..    .++..+-   .+    
T Consensus        44 l~~~~~~~~~~~vLdiG~G-~G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~---~~----  113 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCG-YGVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---YE----  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---TT----
T ss_pred             HHHHcccCCCCeEEEeCCC-CCHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch---hc----
Confidence            4456677799999999987 37777777777 66 999999999888776542    322    2222211   11    


Q ss_pred             HHhhcCCCCccEEEEccCC-------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          254 VKGITHGMGVDYCFECTGV-------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                         ......+|+|+-...-       ...+..+.++|+++ |.++.....
T Consensus       114 ---~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  159 (194)
T 1dus_A          114 ---NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVVIQT  159 (194)
T ss_dssp             ---TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             ---ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCC-CEEEEEECC
Confidence               1113379999865431       13577888999997 988877544

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.44  E-value=0.065  Score=45.65  Aligned_cols=74  Identities=14%  Similarity=0.009  Sum_probs=53.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+. .++...+. |..+   .+   .+.+. +-.++|++|-++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~gd~~~---~~---~l~~a-~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIHGDGSH---KE---ILRDA-EVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEESCTTS---HH---HHHHH-TCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEEcCCCC---HH---HHHhc-CcccCCEEEEec
Confidence            58999999999998888888898 8999999999887754 46665433 2222   22   23332 223799999999


Q ss_pred             CChh
Q 017201          271 GVPS  274 (375)
Q Consensus       271 g~~~  274 (375)
                      +.+.
T Consensus        74 ~~d~   77 (218)
T 3l4b_C           74 PRDE   77 (218)
T ss_dssp             SCHH
T ss_pred             CCcH
Confidence            8874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.44  E-value=0.031  Score=48.57  Aligned_cols=75  Identities=19%  Similarity=0.161  Sum_probs=45.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-cCCCeEEEEcCChh-hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~-~G~~~V~~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .++++||+|+ +++|...++.+.. .|+ +|+.++++++ +.+.+..    ...|-.+  .++..+.+.... ..++|++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~~~~~----~~~Dv~~--~~~v~~~~~~~~-~~~id~l   74 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAENLKF----IKADLTK--QQDITNVLDIIK-NVSFDGI   74 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCTTEEE----EECCTTC--HHHHHHHHHHTT-TCCEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccccceE----EecCcCC--HHHHHHHHHHHH-hCCCCEE
Confidence            4678999988 9999976655544 677 8988887765 2221110    1123333  233444443333 3379999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        75 v~nAg~   80 (244)
T 4e4y_A           75 FLNAGI   80 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.44  E-value=0.038  Score=48.84  Aligned_cols=80  Identities=18%  Similarity=0.236  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHh----hhcCCcE-Ee--CCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|++|||+|+ |++|...++.+...|+ +|++++++ ++..+.+    ++.+... ++  |-.+  .+++.+.+.+... 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~  104 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAAS--ESDFIEAIQTIVQS  104 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHh
Confidence            5789999988 9999988777778899 89999884 3333322    3344322 22  3222  2233333332221 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus       105 ~g~id~li~nAg~  117 (271)
T 4iin_A          105 DGGLSYLVNNAGV  117 (271)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1269999999874

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.43  E-value=0.054  Score=45.93  Aligned_cols=102  Identities=20%  Similarity=0.199  Sum_probs=68.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHH-hhcCCCC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVK-GITHGMG  262 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~-~~~~~~g  262 (375)
                      ......++.+||-+|+|. |..+..+++. |+ +|++++.+++-.+.+++.+...+...      ++..... ....+..
T Consensus        46 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~------~~~~~~~~~~~~~~~  116 (227)
T 3e8s_A           46 LAILGRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHLA------SYAQLAEAKVPVGKD  116 (227)
T ss_dssp             HHHHHTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEEC------CHHHHHTTCSCCCCC
T ss_pred             HHhhcCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccchh------hHHhhcccccccCCC
Confidence            344456779999999864 6677777776 77 99999999998888887643333221      2222111 1123435


Q ss_pred             ccEEEEccC-----ChhhHHHHHHhcccCCeEEEEEcc
Q 017201          263 VDYCFECTG-----VPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       263 ~d~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ||+|+....     -...+..+.+.|+++ |.++....
T Consensus       117 fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~~  153 (227)
T 3e8s_A          117 YDLICANFALLHQDIIELLSAMRTLLVPG-GALVIQTL  153 (227)
T ss_dssp             EEEEEEESCCCSSCCHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             ccEEEECchhhhhhHHHHHHHHHHHhCCC-eEEEEEec
Confidence            999986542     224788999999997 98887643

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.43  E-value=0.035  Score=48.12  Aligned_cols=80  Identities=19%  Similarity=0.173  Sum_probs=47.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .+.++||+|+ |.+|...++.+...|+ +|+++ .+++++.+.+    ++.+... +  .|-.+  .+++.+.+.+... 
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN--PEDVENMVKTAMDA   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHh
Confidence            4678999988 9999988888888898 89888 5565554332    2234322 1  23332  1223222222211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus        81 ~~~~d~vi~~Ag~   93 (247)
T 2hq1_A           81 FGRIDILVNNAGI   93 (247)
T ss_dssp             HSCCCEEEECC--
T ss_pred             cCCCCEEEECCCC
Confidence            1269999999874

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.42  E-value=0.054  Score=47.96  Aligned_cols=90  Identities=19%  Similarity=0.141  Sum_probs=61.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      .+|||+|+|.+|...++.+...|+ +|+++++++++.+.+...+...+. |..     ++.        -.++|+||++.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~-----d~~--------~~~~d~vi~~a   71 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGE-----EPS--------LDGVTHLLIST   71 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSS-----CCC--------CTTCCEEEECC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEeccc-----ccc--------cCCCCEEEECC
Confidence            589999999999998888888898 999999999888777666665443 222     211        23799999998


Q ss_pred             CCh----hhHHHHHHhccc---CCeEEEEEcc
Q 017201          271 GVP----SLLSEALETTKV---GKGKVIVIGV  295 (375)
Q Consensus       271 g~~----~~~~~~~~~l~~---~~G~iv~~g~  295 (375)
                      +..    +.....+..++.   +-.+++.++.
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            642    122333333322   1157777753

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.42  E-value=0.046  Score=46.74  Aligned_cols=102  Identities=25%  Similarity=0.236  Sum_probs=65.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +...++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.++    ...-..++..+-   .+.. .... .
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~---~~~~-~~~~-~  140 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TKPE-EYRA-L  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TCGG-GGTT-T
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccC---CCcc-hhhc-c
Confidence            345578999999999975 8888889988752 39999999986554442    221112222211   1110 0011 1


Q ss_pred             CCCCccEEEEccCChh---h-HHHHHHhcccCCeEEEEE
Q 017201          259 HGMGVDYCFECTGVPS---L-LSEALETTKVGKGKVIVI  293 (375)
Q Consensus       259 ~~~g~d~vid~~g~~~---~-~~~~~~~l~~~~G~iv~~  293 (375)
                      . ..+|+|+.....+.   . +..+.+.|+++ |.++..
T Consensus       141 ~-~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          141 V-PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             C-CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             c-CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            2 26999986655431   3 78899999997 988876

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.41  E-value=0.11  Score=48.22  Aligned_cols=131  Identities=11%  Similarity=0.088  Sum_probs=80.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc--------CCCeEEEE-cCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH--------GAAKIIGI-DKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~--------G~~~V~~~-~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      =+|.|+|+|.+|..-+...+.+        ++ +++++ ++++++.+ .++++|...++.       ++.+.+.    ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~-------d~~ell~----~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERP-RLVHLAEANAGLAEARAGEFGFEKATA-------DWRALIA----DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCC-EEEEEECC--TTHHHHHHHHTCSEEES-------CHHHHHH----CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCc-EEEEEECCCHHHHHHHHHHhCCCeecC-------CHHHHhc----CC
Confidence            4799999999997544333221        45 66655 45666654 456788766552       3333332    23


Q ss_pred             CccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHH---h----hcCCceEEEEeeccccCCCCHHHHHH
Q 017201          262 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA---L----ACGGRTLKGTTFGGIKTKSDLPTLLD  334 (375)
Q Consensus       262 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (375)
                      ++|+|+-++....+.+.+..+|..  |+=|++..+..    .+...   +    -.+++.+.-.+  +.++...+..+.+
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~a--GkhVl~EKPla----~~~~ea~~l~~~a~~~g~~l~vg~--~~R~~p~~~~~k~  165 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMA----PAYADAERMLATAERSGKVAALGY--NYIQNPVMRHIRK  165 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHT--TCEEEECSCSC----SSHHHHHHHHHHHHHSSSCEEECC--GGGGCHHHHHHHH
T ss_pred             CCcEEEECCChHHHHHHHHHHHhc--CCeEEEccCCc----ccHHHHHHhhhhHHhcCCcccccc--ccccChHHHHHHH
Confidence            799999999888788899999987  46677775542    22221   1    13444443222  2334456778889


Q ss_pred             HHHcCCCC
Q 017201          335 KCKNKEFK  342 (375)
Q Consensus       335 ~~~~~~~~  342 (375)
                      ++++|.+-
T Consensus       166 ~i~~G~iG  173 (393)
T 4fb5_A          166 LVGDGVIG  173 (393)
T ss_dssp             HHHTTTTC
T ss_pred             HHHcCCCc
Confidence            99988774

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.41  E-value=0.066  Score=48.69  Aligned_cols=75  Identities=16%  Similarity=0.238  Sum_probs=47.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH--HhhhcCC---cEEe--CCCCCCcccHHHHHHhhcCCCC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE--KGKAFGM---TDFI--NPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~--~~~~lg~---~~v~--~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      +.+|||+|+ |.+|...++.+...|+ +|+++++++++.+  .++.++.   ..++  |-.+  .+.+.+.+...    +
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~----~   75 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE--FSNIIRTIEKV----Q   75 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC--HHHHHHHHHHH----C
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC--HHHHHHHHHhc----C
Confidence            578999998 9999988887777898 9999998876532  3333321   1122  2222  12222233222    5


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+||++.+.
T Consensus        76 ~d~vih~A~~   85 (345)
T 2z1m_A           76 PDEVYNLAAQ   85 (345)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999874

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=95.40  E-value=0.06  Score=45.62  Aligned_cols=99  Identities=15%  Similarity=0.103  Sum_probs=66.2

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      +.......++.+||-+|+|. |..+..+++. +. +|++++.+++-.+.+++.-.  ..++..+-   .+       +..
T Consensus        37 ~l~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~---~~-------~~~  103 (220)
T 3hnr_A           37 ILEDVVNKSFGNVLEFGVGT-GNLTNKLLLA-GR-TVYGIEPSREMRMIAKEKLPKEFSITEGDF---LS-------FEV  103 (220)
T ss_dssp             HHHHHHHTCCSEEEEECCTT-SHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHSCTTCCEESCCS---SS-------CCC
T ss_pred             HHHHhhccCCCeEEEeCCCC-CHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHhCCCceEEEeCCh---hh-------cCC
Confidence            34445566899999999874 6777777776 77 99999999988888765422  11222211   11       111


Q ss_pred             CCCccEEEEccCC-----h---hhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFECTGV-----P---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~~g~-----~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...||+|+....-     +   ..+..+.+.|+++ |.++...
T Consensus       104 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  145 (220)
T 3hnr_A          104 PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG-GKIVFAD  145 (220)
T ss_dssp             CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            1379999875421     1   1678899999998 9988774

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.40  E-value=0.065  Score=51.79  Aligned_cols=84  Identities=20%  Similarity=0.257  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh---H----HHhhhcCCcEE---eCCCCCCcccHHHHHH
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK---K----EKGKAFGMTDF---INPDDEPNKSISELVK  255 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~---~----~~~~~lg~~~v---~~~~~~~~~~~~~~i~  255 (375)
                      .++++.++||+|+ |++|...++.+...|+++|+.++++...   .    +.+++.|....   .|-.+  .+.+.+.+.
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d--~~~v~~~~~  299 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD--RESVRELLG  299 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHH
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC--HHHHHHHHH
Confidence            3578899999988 9999987777767798669999887642   1    22344565332   23332  233344444


Q ss_pred             hhcCCCCccEEEEccCC
Q 017201          256 GITHGMGVDYCFECTGV  272 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~  272 (375)
                      +......+|.||++.|.
T Consensus       300 ~i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          300 GIGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             TSCTTSCEEEEEECCCC
T ss_pred             HHHhcCCCcEEEECCcc
Confidence            44222368999999873

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.40  E-value=0.033  Score=50.55  Aligned_cols=96  Identities=17%  Similarity=0.136  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc------CC----cEEeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF------GM----TDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l------g~----~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.    -.++.      .+..+.+.. .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~------~D~~~~l~~-~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN-H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE------ChHHHHHHh-c
Confidence            4568999998863 66777888876545999999999888877652      11    11221      234343433 2


Q ss_pred             CCCCccEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       ...||+||-....          ...++.+.+.|+++ |.++.-.
T Consensus       179 -~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          179 -KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             -TTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             -CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence             3379999854421          34678899999997 9888754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.40  E-value=0.046  Score=47.68  Aligned_cols=81  Identities=17%  Similarity=0.174  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHhhhc--CCcE-E--eCCCCCCc-ccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAF--GMTD-F--INPDDEPN-KSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~l--g~~~-v--~~~~~~~~-~~~~~~i~~~~~-  259 (375)
                      .+.++||+|+ |++|...++.+...|+++|++++++++  ..+.+++.  +... +  .|-.+  . +++.+.+.+... 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV--PVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS--CHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC--ChHHHHHHHHHHHHh
Confidence            4688999988 999998888888889844888888753  33333332  2221 1  23332  1 223222222211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        82 ~g~id~lv~~Ag~   94 (254)
T 1sby_A           82 LKTVDILINGAGI   94 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            1269999999973

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.39  E-value=0.036  Score=48.99  Aligned_cols=80  Identities=15%  Similarity=0.130  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .|+++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+....   .|-.+  .+++.+.+.+... 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ--ESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999988888888899 8888877 55444332    23343221   23333  1223322322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus       104 ~g~id~lv~nAg~  116 (269)
T 4dmm_A          104 WGRLDVLVNNAGI  116 (269)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            1269999999874

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.39  E-value=0.054  Score=48.49  Aligned_cols=73  Identities=18%  Similarity=0.214  Sum_probs=48.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-------hhHHHhh---hcCCcEE-eCCCCCCcccHHHHHHhhc
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-------WKKEKGK---AFGMTDF-INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-------~~~~~~~---~lg~~~v-~~~~~~~~~~~~~~i~~~~  258 (375)
                      +.+|||+|+ |.+|...++.+...|+ +|+++++++       ++.+.++   ..++..+ .|..+   .+   .+.+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~---~l~~~~   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND---HE---TLVKAI   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC---HH---HHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC---HH---HHHHHH
Confidence            467999998 9999988887777798 899999876       5544332   3455443 23333   22   233322


Q ss_pred             CCCCccEEEEccCC
Q 017201          259 HGMGVDYCFECTGV  272 (375)
Q Consensus       259 ~~~g~d~vid~~g~  272 (375)
                      .  ++|+||++.+.
T Consensus        75 ~--~~d~vi~~a~~   86 (307)
T 2gas_A           75 K--QVDIVICAAGR   86 (307)
T ss_dssp             T--TCSEEEECSSS
T ss_pred             h--CCCEEEECCcc
Confidence            2  59999999875

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.38  E-value=0.12  Score=46.21  Aligned_cols=74  Identities=20%  Similarity=0.165  Sum_probs=52.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|....        .+..+.+.      ..|+||-++..
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~------~~Dvvi~~vp~   66 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQVV--------SSPADVAE------KADRIITMLPT   66 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEEC--------SSHHHHHH------HCSEEEECCSS
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeec--------CCHHHHHh------cCCEEEEeCCC
Confidence            58899999999987777777788 89999999998888777665321        12222222      47899998876


Q ss_pred             hhhHHHHHH
Q 017201          273 PSLLSEALE  281 (375)
Q Consensus       273 ~~~~~~~~~  281 (375)
                      +..+...+.
T Consensus        67 ~~~~~~v~~   75 (296)
T 2gf2_A           67 SINAIEAYS   75 (296)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            655555554

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.38  E-value=0.054  Score=48.00  Aligned_cols=96  Identities=19%  Similarity=0.215  Sum_probs=65.6

Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcc
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK  248 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~  248 (375)
                      .+||+...+...+.+..---.|++++|+|. +.+|..++.++...|+ +|+++.+..                      .
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T----------------------~  196 (286)
T 4a5o_A          140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT----------------------R  196 (286)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC----------------------S
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC----------------------c
Confidence            355554444443333323358999999998 5589999999999999 888886421                      1


Q ss_pred             cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       249 ~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++.+.++      ..|+||.++|.+..+..  ..++++ ..++.+|...
T Consensus       197 ~L~~~~~------~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~~  236 (286)
T 4a5o_A          197 DLADHVS------RADLVVVAAGKPGLVKG--EWIKEG-AIVIDVGINR  236 (286)
T ss_dssp             CHHHHHH------TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCSCS
T ss_pred             CHHHHhc------cCCEEEECCCCCCCCCH--HHcCCC-eEEEEecccc
Confidence            2333333      58999999998744332  556886 8888888654

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.38  E-value=0.0073  Score=52.84  Aligned_cols=97  Identities=21%  Similarity=0.153  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHhhc
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ..+.++++||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|..   .++..+-   .++     .. 
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~-  110 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM---DNL-----PF-  110 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----SS-
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhC-----CC-
Confidence            3678999999999984 8889999999887 99999999988877653    3421   1222111   111     01 


Q ss_pred             CCCCccEEEEcc-----CChhhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCFECT-----GVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vid~~-----g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ....||+|+...     .....+..+.++|+|+ |.++...
T Consensus       111 ~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          111 QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            223799997542     2234688899999997 9988775

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.37  E-value=0.037  Score=48.68  Aligned_cols=81  Identities=17%  Similarity=0.240  Sum_probs=51.1

Q ss_pred             CCCCEEEEECC-C-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcC-CcE-E--eCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGL-G-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFG-MTD-F--INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg-~~~-v--~~~~~~~~~~~~~~i~~~~  258 (375)
                      -.++++||+|+ | ++|...++.+...|+ +|+.++++.++.+.+.    +.+ ... +  .|-.+  .+++.+.+.+..
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~   96 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS--TEAVDALITQTV   96 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC--HHHHHHHHHHHH
Confidence            35789999998 7 799988887778899 8999999987765432    222 111 1  23333  223333332221


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . ...+|++|++.|.
T Consensus        97 ~~~g~id~li~~Ag~  111 (266)
T 3o38_A           97 EKAGRLDVLVNNAGL  111 (266)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCCcEEEECCCc
Confidence            1 1269999999983

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=95.37  E-value=0.037  Score=50.99  Aligned_cols=130  Identities=12%  Similarity=0.107  Sum_probs=77.2

Q ss_pred             EEEEECCCHHHH-HHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCC--cEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGL-GAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~-~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|. ..+...+.. ++ +++++.......+++++++.  ..++.       ++.+.    ....++|+|+.
T Consensus         4 rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~a~~~~~~~~~~~~-------~~~~l----l~~~~~D~V~i   71 (349)
T 3i23_A            4 KMGFIGFGKSANRYHLPYVMIRETL-EVKTIFDLHVNEKAAAPFKEKGVNFTA-------DLNEL----LTDPEIELITI   71 (349)
T ss_dssp             EEEEECCSHHHHHTTHHHHTTCTTE-EEEEEECTTCCHHHHHHHHTTTCEEES-------CTHHH----HSCTTCCEEEE
T ss_pred             EEEEEccCHHHHHHHHHHHhhCCCe-EEEEEECCCHHHHHHHhhCCCCCeEEC-------CHHHH----hcCCCCCEEEE
Confidence            689999999997 566655544 66 77766644433444455322  12332       22222    22347999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHH------h-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA------L-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  341 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (375)
                      ++....+.+.+..++..+  +-+++..+.    ..+...      . -.+++.+.-.+  +.+....+..+.+++++|.+
T Consensus        72 ~tp~~~h~~~~~~al~aG--k~Vl~EKP~----a~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~i  143 (349)
T 3i23_A           72 CTPAHTHYDLAKQAILAG--KSVIVEKPF----CDTLEHAEELFALGQEKGVVVMPYQ--NRRFDGDYLAMKQVVEQGFL  143 (349)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CEEEECSCS----CSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHHTTT
T ss_pred             eCCcHHHHHHHHHHHHcC--CEEEEECCC----cCCHHHHHHHHHHHHHcCCeEEEEe--cccCCHHHHHHHHHHhcCCC
Confidence            998887888888998874  556665443    222211      1 23455543221  22334457788888888876


Q ss_pred             C
Q 017201          342 K  342 (375)
Q Consensus       342 ~  342 (375)
                      -
T Consensus       144 G  144 (349)
T 3i23_A          144 G  144 (349)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.34  E-value=0.051  Score=48.35  Aligned_cols=84  Identities=13%  Similarity=0.044  Sum_probs=54.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|.|+|+|.+|...+..+.. |. +|++.++++++.+.+.+.|.... +  .   .+       ..  .+.|+||.++..
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~--~---~~-------~~--~~~D~vi~~v~~   65 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-V--P---LE-------RV--AEARVIFTCLPT   65 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-C--C---GG-------GG--GGCSEEEECCSS
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-C--H---HH-------HH--hCCCEEEEeCCC
Confidence            58899999999976666666 98 89999999988877766554321 1  1   11       11  157888888887


Q ss_pred             hhhHHHHH----HhcccCCeEEEEEc
Q 017201          273 PSLLSEAL----ETTKVGKGKVIVIG  294 (375)
Q Consensus       273 ~~~~~~~~----~~l~~~~G~iv~~g  294 (375)
                      +..+...+    ..++++ ..++.++
T Consensus        66 ~~~~~~v~~~l~~~l~~~-~~vv~~s   90 (289)
T 2cvz_A           66 TREVYEVAEALYPYLREG-TYWVDAT   90 (289)
T ss_dssp             HHHHHHHHHHHTTTCCTT-EEEEECS
T ss_pred             hHHHHHHHHHHHhhCCCC-CEEEECC
Confidence            64344433    344554 5555544

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.34  E-value=0.091  Score=51.08  Aligned_cols=79  Identities=15%  Similarity=0.263  Sum_probs=51.3

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh---H----HHhhhcCCcEE---eCCCCCCcccHHHHHHh
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK---K----EKGKAFGMTDF---INPDDEPNKSISELVKG  256 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~---~----~~~~~lg~~~v---~~~~~~~~~~~~~~i~~  256 (375)
                      ++++.++||+|+ |++|...++.+...|+++|+.++++...   .    +.+++.|....   .|-.+  .+.+.+.+.+
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd--~~~v~~~~~~  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE--RDALAALVTA  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC--HHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC--HHHHHHHHhc
Confidence            578899999988 9999988777778898678888887632   1    22334554332   23332  1223333332


Q ss_pred             hcCCCCccEEEEccCC
Q 017201          257 ITHGMGVDYCFECTGV  272 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~  272 (375)
                          ..+|+||++.|.
T Consensus       334 ----~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 ----YPPNAVFHTAGI  345 (511)
T ss_dssp             ----SCCSEEEECCCC
T ss_pred             ----CCCcEEEECCcc
Confidence                369999999873

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=95.34  E-value=0.14  Score=46.67  Aligned_cols=135  Identities=10%  Similarity=0.114  Sum_probs=78.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEEE-cCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH-GAAKIIGI-DKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~-~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -+|.|+|+|.+|...+...+.. ++ +++++ ++++++.+. ++++|...++.       ++.+.+    ....+|+|+.
T Consensus         6 ~rigiiG~G~ig~~~~~~l~~~~~~-~~~av~d~~~~~~~~~a~~~~~~~~~~-------~~~~ll----~~~~~D~V~i   73 (329)
T 3evn_A            6 VRYGVVSTAKVAPRFIEGVRLAGNG-EVVAVSSRTLESAQAFANKYHLPKAYD-------KLEDML----ADESIDVIYV   73 (329)
T ss_dssp             EEEEEEBCCTTHHHHHHHHHHHCSE-EEEEEECSCSSTTCC---CCCCSCEES-------CHHHHH----TCTTCCEEEE
T ss_pred             eEEEEEechHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHHHcCCCcccC-------CHHHHh----cCCCCCEEEE
Confidence            3689999999998766655554 55 66644 666666543 34566543332       233332    2337999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-cccc-chHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      ++....+.+.+..++..+  +-+++..+.. .... .....+ -.+++.+.-..  ..++...+..+.+++++|.+-
T Consensus        74 ~tp~~~h~~~~~~al~aG--k~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  146 (329)
T 3evn_A           74 ATINQDHYKVAKAALLAG--KHVLVEKPFTLTYDQANELFALAESCNLFLMEAQ--KSVFIPMTQVIKKLLASGEIG  146 (329)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEEC--SSCSSHHHHHHHHHHHTTTTC
T ss_pred             CCCcHHHHHHHHHHHHCC--CeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEE--cccCCHHHHHHHHHHhCCCCC
Confidence            998887888888888874  5566665432 1100 111111 22455443221  222334567888889888774

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.34  E-value=0.089  Score=47.99  Aligned_cols=135  Identities=15%  Similarity=0.082  Sum_probs=80.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEE-EcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH-GAAKIIG-IDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~-G~~~V~~-~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -+|.|+|+|.+|...+...+.. ++ ++++ +++++++.+. ++++|...++       .++.+.+.    ..++|+|+.
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~----~~~~D~V~i   73 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY-------GSYEELCK----DETIDIIYI   73 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB-------SSHHHHHH----CTTCSEEEE
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee-------CCHHHHhc----CCCCCEEEE
Confidence            3789999999998766666664 56 6664 5667776554 4566764332       23433332    237999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      ++....+.+.+..++..+  +-+++..+.. ... ....... -.+++.+.-.+  ..+....+..+.+++++|.+-
T Consensus        74 ~tp~~~h~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  146 (330)
T 3e9m_A           74 PTYNQGHYSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ--KSVFLPITQKVKATIQEGGLG  146 (330)
T ss_dssp             CCCGGGHHHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC--SGGGCHHHHHHHHHHHTTTTC
T ss_pred             cCCCHHHHHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE--hhhhCHHHHHHHHHHhCCCCC
Confidence            998887888888888874  4455654432 100 0111111 22444443222  223344577888999988764

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.34  E-value=0.01  Score=52.07  Aligned_cols=75  Identities=20%  Similarity=0.150  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.     +.. ..|-.+  .+++.+.+.+... -..+|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d--~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD--TEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS--HHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 9999998888888898 99999988765432     211 123333  1233333332211 1258999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus        92 v~nAg~   97 (253)
T 2nm0_A           92 IANAGV   97 (253)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998873

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=95.33  E-value=0.066  Score=48.66  Aligned_cols=138  Identities=11%  Similarity=0.099  Sum_probs=81.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhc--CCCCccEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT--HGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~--~~~g~d~vi  267 (375)
                      -+|.|+|+ |.+|...+...+..+. +++++. +++++....+.++...++..-    +++.+.+..+.  ...++|+|+
T Consensus         4 irvgiIG~gG~i~~~h~~~l~~~~~-~lvav~d~~~~~~~~~~~~~~~~~~~~~----~~ll~~~~~l~~~~~~~vD~V~   78 (318)
T 3oa2_A            4 KNFALIGAAGYIAPRHMRAIKDTGN-CLVSAYDINDSVGIIDSISPQSEFFTEF----EFFLDHASNLKRDSATALDYVS   78 (318)
T ss_dssp             CEEEEETTTSSSHHHHHHHHHHTTC-EEEEEECSSCCCGGGGGTCTTCEEESSH----HHHHHHHHHHTTSTTTSCCEEE
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCC-EEEEEEcCCHHHHHHHhhCCCCcEECCH----HHHHHhhhhhhhccCCCCcEEE
Confidence            37899999 6789887777777787 555554 555554444445444444221    22332222221  234799999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHH---h----hcCCceEEEEeeccccCCCCHHHHHHHHHcCC
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA---L----ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (375)
                      -++....+.+.+..+|..+  +=+.+..+..    .+...   +    -.+++.+.-.+  ..+....+..+.+++++|.
T Consensus        79 I~tP~~~H~~~~~~al~aG--khVl~EKPla----~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~g~  150 (318)
T 3oa2_A           79 ICSPNYLHYPHIAAGLRLG--CDVICEKPLV----PTPEMLDQLAVIERETDKRLYNIL--QLRHHQAIIALKDKVAREK  150 (318)
T ss_dssp             ECSCGGGHHHHHHHHHHTT--CEEEECSSCC----SCHHHHHHHHHHHHHHTCCEEECC--GGGGCHHHHHHHHHHHHS-
T ss_pred             ECCCcHHHHHHHHHHHHCC--CeEEEECCCc----CCHHHHHHHHHHHHHhCCEEEEEE--hhhcCHHHHHHHHHHhcCC
Confidence            9998887888899999874  5567765532    22221   1    12344433221  2333445777888888886


Q ss_pred             CC
Q 017201          341 FK  342 (375)
Q Consensus       341 ~~  342 (375)
                      +-
T Consensus       151 iG  152 (318)
T 3oa2_A          151 SP  152 (318)
T ss_dssp             CS
T ss_pred             CC
Confidence            63

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.32  E-value=0.045  Score=49.97  Aligned_cols=41  Identities=12%  Similarity=0.079  Sum_probs=34.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKG  231 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~~~~  231 (375)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4688999988 9999998888888899 899998 888776543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.32  E-value=0.048  Score=48.04  Aligned_cols=74  Identities=12%  Similarity=0.149  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCC-CCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHG-MGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~-~g~d~v  266 (375)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.     -.+..+ .|-.+  .+++.+.+.+.... .++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-----~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPGE-----AKYDHIECDVTN--PDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCCS-----CSSEEEECCTTC--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCcccC-----CceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999988 9999988888888899 899999877651     112221 23332  12333333222111 169999


Q ss_pred             EEccC
Q 017201          267 FECTG  271 (375)
Q Consensus       267 id~~g  271 (375)
                      |++.|
T Consensus        79 v~~Ag   83 (264)
T 2dtx_A           79 VNNAG   83 (264)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.32  E-value=0.044  Score=48.30  Aligned_cols=93  Identities=14%  Similarity=0.130  Sum_probs=65.0

Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcc
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK  248 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~  248 (375)
                      .+||+.......+. ..+ -.|.+++|+|.| .+|..+++++...|+ +|+++.+..                      .
T Consensus       131 ~~PcTp~gv~~lL~-~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t----------------------~  185 (276)
T 3ngx_A          131 LVPATPRAVIDIMD-YYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT----------------------K  185 (276)
T ss_dssp             SCCHHHHHHHHHHH-HHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------S
T ss_pred             CCCCcHHHHHHHHH-HhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc----------------------c
Confidence            35555444444343 334 789999999985 689999999999999 898886421                      2


Q ss_pred             cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       249 ~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++.+.++      ..|+||.++|.+..+..  ..++++ ..++.+|..
T Consensus       186 ~L~~~~~------~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          186 DIGSMTR------SSKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             CHHHHHH------HSSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             cHHHhhc------cCCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            3444443      48999999998744332  456886 888888755

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.32  E-value=0.058  Score=49.86  Aligned_cols=74  Identities=18%  Similarity=0.151  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhh-cCCcEEe-CCC-CCCcccHHHHHHhhcCCCCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKA-FGMTDFI-NPD-DEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~-lg~~~v~-~~~-~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      .+.+|||+|+ |.+|...++.+... |+ +|+++++++++...+.. .+...+. |-. +   .+....+.+     ++|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d---~~~~~~~~~-----~~d   93 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITIN---KEWVEYHVK-----KCD   93 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTTC---HHHHHHHHH-----HCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCCC---HHHHHHHhc-----cCC
Confidence            3578999998 99999877777766 88 99999998877655433 2333322 332 2   222222222     699


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      +||++.+.
T Consensus        94 ~Vih~A~~  101 (372)
T 3slg_A           94 VILPLVAI  101 (372)
T ss_dssp             EEEECBCC
T ss_pred             EEEEcCcc
Confidence            99998863

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.31  E-value=0.064  Score=49.24  Aligned_cols=91  Identities=11%  Similarity=0.134  Sum_probs=61.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|.|.+|...+..++..|. +|++.++++++.+.++++|+...        .+..+.+.+..  .+.|+||-++.
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~--------~~~~e~~~~a~--~~aDlVilavP   77 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS--------ADLEATLQRAA--AEDALIVLAVP   77 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE--------SCHHHHHHHHH--HTTCEEEECSC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee--------CCHHHHHHhcc--cCCCEEEEeCC
Confidence            579999999999988888888898 89999999999999988887432        12333332211  14799999987


Q ss_pred             ChhhHHHHH---HhcccCCeEEEEEcc
Q 017201          272 VPSLLSEAL---ETTKVGKGKVIVIGV  295 (375)
Q Consensus       272 ~~~~~~~~~---~~l~~~~G~iv~~g~  295 (375)
                      .. .+...+   .-++++ ..++.++.
T Consensus        78 ~~-~~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           78 MT-AIDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HH-HHHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HH-HHHHHHHHHHccCCC-CEEEEcCC
Confidence            54 333322   223554 55555543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.30  E-value=0.076  Score=51.38  Aligned_cols=83  Identities=19%  Similarity=0.281  Sum_probs=52.8

Q ss_pred             CCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHhhhcCCcEEe---CCCCCCcccHHHHH
Q 017201          188 VEKG--SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-------KEKGKAFGMTDFI---NPDDEPNKSISELV  254 (375)
Q Consensus       188 ~~~g--~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~-------~~~~~~lg~~~v~---~~~~~~~~~~~~~i  254 (375)
                      ++++  .++||+|+ |++|...++.+...|+++|+.+.++...       .+.+++.|....+   |-.+  .+.+.+.+
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd--~~~v~~~~  311 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAAD--REALAALL  311 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHH
Confidence            3455  89999988 9999987777777898788888876322       1233456654322   3332  23344444


Q ss_pred             HhhcCCCCccEEEEccCC
Q 017201          255 KGITHGMGVDYCFECTGV  272 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~  272 (375)
                      .+......+|+||++.|.
T Consensus       312 ~~i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          312 AELPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             HTCCTTSCEEEEEECCCC
T ss_pred             HHHHHhCCCeEEEECCcc
Confidence            444333369999999874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.26  E-value=0.031  Score=49.38  Aligned_cols=79  Identities=13%  Similarity=0.193  Sum_probs=49.4

Q ss_pred             CCCEEEEEC---CCHHHHHHHHHHHHcCCCeEEEEcCChhhH-H-HhhhcCCc--E-EeCCCCCCcccHHHHHHhh---c
Q 017201          190 KGSSVAVLG---LGTVGLGAVDGARMHGAAKIIGIDKNPWKK-E-KGKAFGMT--D-FINPDDEPNKSISELVKGI---T  258 (375)
Q Consensus       190 ~g~~VlI~G---ag~~G~~ai~la~~~G~~~V~~~~~~~~~~-~-~~~~lg~~--~-v~~~~~~~~~~~~~~i~~~---~  258 (375)
                      .++++||+|   +|++|...++.+...|+ +|+.+++++++. + ..++++..  . ..|-.+  .+++.+.+.+.   .
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC--HHHHHHHHHHHHHHh
Confidence            478899998   48999988888888899 899999887652 3 33344432  1 123333  12233333322   2


Q ss_pred             C-CCCccEEEEccC
Q 017201          259 H-GMGVDYCFECTG  271 (375)
Q Consensus       259 ~-~~g~d~vid~~g  271 (375)
                      + +.++|++|++.|
T Consensus        83 g~~~~iD~lv~nAg   96 (269)
T 2h7i_A           83 GAGNKLDGVVHSIG   96 (269)
T ss_dssp             CTTCCEEEEEECCC
T ss_pred             CCCCCceEEEECCc
Confidence            2 126999999987

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.26  E-value=0.057  Score=49.11  Aligned_cols=79  Identities=23%  Similarity=0.174  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC---------ChhhHHH----hhhcCCcEEeCCCCCCcccHHHHHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK---------NPWKKEK----GKAFGMTDFINPDDEPNKSISELVK  255 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~---------~~~~~~~----~~~lg~~~v~~~~~~~~~~~~~~i~  255 (375)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         +.++.+.    +++.+...+.|..+  ..++.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~--~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC--HHHHHHHHH
Confidence            4788999998 9999988888878899 8988643         4444432    23344444455444  233333332


Q ss_pred             hhcC-CCCccEEEEccC
Q 017201          256 GITH-GMGVDYCFECTG  271 (375)
Q Consensus       256 ~~~~-~~g~d~vid~~g  271 (375)
                      +... ..++|++|++.|
T Consensus        85 ~~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHHTSCCCEEEECCC
T ss_pred             HHHHHcCCCCEEEECCC
Confidence            2211 126999999987

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.25  E-value=0.055  Score=49.19  Aligned_cols=77  Identities=13%  Similarity=0.118  Sum_probs=48.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-Hhhhc-CCcEE-eCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAF-GMTDF-INPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~l-g~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      -.+.+|||+|+ |.+|...++.+...|+ +|++++++.++.. .++.+ +...+ .|-.+  .+.+.+.+.+.    ++|
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d--~~~~~~~~~~~----~~D   90 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPVAGLSVIEGSVTD--AGLLERAFDSF----KPT   90 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSCTTEEEEECCTTC--HHHHHHHHHHH----CCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhccCCceEEEeeCCC--HHHHHHHHhhc----CCC
Confidence            34678999998 9999988888878898 9999998654322 12222 22222 23222  12233333322    699


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      +||++.+.
T Consensus        91 ~vih~A~~   98 (330)
T 2pzm_A           91 HVVHSAAA   98 (330)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.25  E-value=0.024  Score=49.24  Aligned_cols=75  Identities=19%  Similarity=0.159  Sum_probs=45.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHH-----Hhh-cCCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELV-----KGI-THGMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i-----~~~-~~~~g  262 (375)
                      .++++||+|+ |++|...++.+.. |+ +|+++++++++.+.+.+..-...+..      |+....     .+. ..-.+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES------DIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC------CHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec------ccchHHHHHHHHHHHHhcCC
Confidence            3688999988 9999976665544 87 89999999888776655332222211      122111     111 11126


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus        76 id~lv~~Ag~   85 (245)
T 3e9n_A           76 VDTLVHAAAV   85 (245)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEECCCc
Confidence            9999999974

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.25  E-value=0.055  Score=48.42  Aligned_cols=87  Identities=15%  Similarity=0.312  Sum_probs=60.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.+.     .. .   .    .++.+.+.      ..|+|+-
T Consensus       120 l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~-----~~-~---~----~~l~ell~------~aDiV~l  179 (290)
T 3gvx_A          120 LYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNV-----DV-I---S----ESPADLFR------QSDFVLI  179 (290)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTC-----SE-E---C----SSHHHHHH------HCSEEEE
T ss_pred             eecchheeeccCchhHHHHHHHHhhCc-EEEEEecccccccc-----cc-c---c----CChHHHhh------ccCeEEE
Confidence            357899999999999999999999999 99999988765432     11 1   0    13333332      4788888


Q ss_pred             ccCCh-h---hH-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVP-S---LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~-~---~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.... +   .+ ...+..++++ ..++.++..
T Consensus       180 ~~P~t~~t~~li~~~~l~~mk~g-ailIN~aRG  211 (290)
T 3gvx_A          180 AIPLTDKTRGMVNSRLLANARKN-LTIVNVARA  211 (290)
T ss_dssp             CCCCCTTTTTCBSHHHHTTCCTT-CEEEECSCG
T ss_pred             EeeccccchhhhhHHHHhhhhcC-ceEEEeehh
Confidence            77632 1   12 4567788886 888877633

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.24  E-value=0.092  Score=49.47  Aligned_cols=102  Identities=13%  Similarity=0.143  Sum_probs=70.3

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      .....+.++.+||-+|+|. |..+..+++ .|. +|++++.+++-.+.+++.+.......-.   .+..+.+. ..++ .
T Consensus       100 ~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~---~~~~~~l~-~~~~-~  171 (416)
T 4e2x_A          100 LATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFE---KATADDVR-RTEG-P  171 (416)
T ss_dssp             HHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCS---HHHHHHHH-HHHC-C
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeec---hhhHhhcc-cCCC-C
Confidence            4455678999999999864 666666665 477 9999999999999888877655433222   22333332 1223 7


Q ss_pred             ccEEEEccCC------hhhHHHHHHhcccCCeEEEEE
Q 017201          263 VDYCFECTGV------PSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       263 ~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ||+|+....-      ...+..+.++|+++ |.++..
T Consensus       172 fD~I~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~  207 (416)
T 4e2x_A          172 ANVIYAANTLCHIPYVQSVLEGVDALLAPD-GVFVFE  207 (416)
T ss_dssp             EEEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEECChHHhcCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            9999865431      24678899999997 988865

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.24  E-value=0.042  Score=50.09  Aligned_cols=78  Identities=10%  Similarity=0.098  Sum_probs=48.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhh
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-----PWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGI  257 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-----~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~  257 (375)
                      ++++||+|+ |++|...++.+...|+ +|++++++     +++.+.+.    ..+... .  .|-.+  .+.+.+.+.+.
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd--~~~v~~~~~~~   81 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS--QVSVDRAIDQI   81 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHH
Confidence            678999998 9999998888888899 89987765     33333332    233322 1  23322  23333333332


Q ss_pred             cC-CCCccEEEEccC
Q 017201          258 TH-GMGVDYCFECTG  271 (375)
Q Consensus       258 ~~-~~g~d~vid~~g  271 (375)
                      .. ..++|++|++.|
T Consensus        82 ~~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHHSCCSEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            21 126999999998

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.24  E-value=0.058  Score=47.77  Aligned_cols=33  Identities=24%  Similarity=0.309  Sum_probs=29.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEec
Confidence            5789999988 9999988888888899 8999987

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.22  E-value=0.087  Score=50.33  Aligned_cols=102  Identities=20%  Similarity=0.200  Sum_probs=65.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCcE--EeCCCCCCcccHHHHHHhh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~i~~~  257 (375)
                      ...+++|++||=+|+|+ |..++++|..++ ..+|++++.++++.+.++    .+|...  ++..      +... +...
T Consensus       100 ~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~------Da~~-l~~~  171 (456)
T 3m4x_A          100 AAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH------APAE-LVPH  171 (456)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC------CHHH-HHHH
T ss_pred             HcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC------CHHH-hhhh
Confidence            44678999999988754 455666776653 238999999999987765    356543  2222      2221 1111


Q ss_pred             cCCCCccEEEE---ccCCh-------------------------hhHHHHHHhcccCCeEEEEEccC
Q 017201          258 THGMGVDYCFE---CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       258 ~~~~g~d~vid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ..+ .||.|+-   |+|..                         ..+..++++|+++ |+++....+
T Consensus       172 ~~~-~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs  236 (456)
T 3m4x_A          172 FSG-FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYSTCT  236 (456)
T ss_dssp             HTT-CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEESC
T ss_pred             ccc-cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEEee
Confidence            223 6999864   33321                         3577889999997 998865433

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.21  E-value=0.034  Score=48.98  Aligned_cols=79  Identities=16%  Similarity=0.194  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++ ++++.+.+    ++.+... +  .|-.+  .+++.+.+.+... 
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK--PSEVVALFDKAVSH   96 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            4678999988 9999988888888898 8999988 66654432    2334432 1  23332  1223333322211 


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      -.++|++|++.|
T Consensus        97 ~~~~d~vi~~Ag  108 (274)
T 1ja9_A           97 FGGLDFVMSNSG  108 (274)
T ss_dssp             HSCEEEEECCCC
T ss_pred             cCCCCEEEECCC
Confidence            116999999887

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.19  E-value=0.12  Score=46.87  Aligned_cols=93  Identities=10%  Similarity=0.013  Sum_probs=63.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhc-CCc-----EEeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAF-GMT-----DFINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~l-g~~-----~v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +..     .++.      .|..+.+..... ..||
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~------~Da~~~l~~~~~-~~fD  161 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV------DDARMVAESFTP-ASRD  161 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE------SCHHHHHHTCCT-TCEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE------CcHHHHHhhccC-CCCC
Confidence            3999999864 67778888865 66 999999999988888753 221     1221      234444444333 3799


Q ss_pred             EEEEccC----------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          265 YCFECTG----------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       265 ~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +||-...          ..+.+..+.+.|+++ |.++...
T Consensus       162 vIi~D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~  200 (317)
T 3gjy_A          162 VIIRDVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANC  200 (317)
T ss_dssp             EEEECCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEe
Confidence            9875332          134688899999997 9887654

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=95.19  E-value=0.12  Score=47.92  Aligned_cols=132  Identities=19%  Similarity=0.151  Sum_probs=77.5

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCeEEEE-cCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGLGTVGLG-AVDGARMH-GAAKIIGI-DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Gag~~G~~-ai~la~~~-G~~~V~~~-~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|.|+|+|.+|.. .+...+.. ++ +++++ ++++++..  +.++...++.       ++.+.+    ....+|+|+.+
T Consensus         9 rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~~-------~~~~ll----~~~~~D~V~i~   74 (364)
T 3e82_A            9 NIALIGYGFVGKTFHAPLIRSVPGL-NLAFVASRDEEKVK--RDLPDVTVIA-------SPEAAV----QHPDVDLVVIA   74 (364)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTSTTE-EEEEEECSCHHHHH--HHCTTSEEES-------CHHHHH----TCTTCSEEEEC
T ss_pred             eEEEECCCHHHHHHHHHHHhhCCCe-EEEEEEcCCHHHHH--hhCCCCcEEC-------CHHHHh----cCCCCCEEEEe
Confidence            6899999999984 66666655 66 67654 55565543  3444333332       233332    23479999999


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEccCCC-cccc-chHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      +....+.+.+..++..+  +-+++..+.. .... ..+... -.+++.+.-.+  +.++...+..+.+++++|.+-
T Consensus        75 tp~~~H~~~~~~al~aG--k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  146 (364)
T 3e82_A           75 SPNATHAPLARLALNAG--KHVVVDKPFTLDMQEARELIALAEEKQRLLSVFH--NRRWDSDYLGIRQVIEQGTLG  146 (364)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--CCTTCHHHHHHHHHHHHTTTC
T ss_pred             CChHHHHHHHHHHHHCC--CcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--ecccCHHHHHHHHHHHcCCCc
Confidence            98887888888888874  5566765432 1100 111111 22445443221  223334567888889888764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=95.18  E-value=0.092  Score=48.32  Aligned_cols=36  Identities=22%  Similarity=0.204  Sum_probs=30.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH--cCCCeEEEEcCChh
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARM--HGAAKIIGIDKNPW  226 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~--~G~~~V~~~~~~~~  226 (375)
                      .+.+|||+|+ |.+|...++.+..  .|+ +|+++++++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCc
Confidence            4689999988 9999987777776  798 9999998654

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=95.18  E-value=0.06  Score=45.35  Aligned_cols=93  Identities=16%  Similarity=0.129  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .+.++.+||-+|+|. |..+..+++. |. +|++++.+++-.+.+++. +......       ++    ..+.....||+
T Consensus        40 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-------d~----~~~~~~~~fD~  105 (211)
T 3e23_A           40 ELPAGAKILELGCGA-GYQAEAMLAA-GF-DVDATDGSPELAAEASRRLGRPVRTM-------LF----HQLDAIDAYDA  105 (211)
T ss_dssp             TSCTTCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHTSCCEEC-------CG----GGCCCCSCEEE
T ss_pred             hcCCCCcEEEECCCC-CHHHHHHHHc-CC-eEEEECCCHHHHHHHHHhcCCceEEe-------ee----ccCCCCCcEEE
Confidence            467899999999863 6677777776 77 999999999888887654 4332221       11    11112347999


Q ss_pred             EEEccCC--------hhhHHHHHHhcccCCeEEEEEc
Q 017201          266 CFECTGV--------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       266 vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      |+....-        ...+..+.+.|+++ |.++..-
T Consensus       106 v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  141 (211)
T 3e23_A          106 VWAHACLLHVPRDELADVLKLIWRALKPG-GLFYASY  141 (211)
T ss_dssp             EEECSCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEecCchhhcCHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            9865421        13678889999997 9887763

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.17  E-value=0.1  Score=46.47  Aligned_cols=73  Identities=23%  Similarity=0.245  Sum_probs=48.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC-CCeEEEEcCChhhHH--HhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHG-AAKIIGIDKNPWKKE--KGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G-~~~V~~~~~~~~~~~--~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ..+|||+|+ |.+|...++.+...| + +|+++++++++..  .+...++..+. |..+   .+   .+.+...  ++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d---~~---~l~~~~~--~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDD---QV---IMELALN--GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTC---HH---HHHHHHT--TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCC---HH---HHHHHHh--cCCE
Confidence            468999998 999998887777777 7 9999999877642  23344554432 3332   22   2333222  5999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      ||.+.+.
T Consensus        76 vi~~a~~   82 (299)
T 2wm3_A           76 TFIVTNY   82 (299)
T ss_dssp             EEECCCH
T ss_pred             EEEeCCC
Confidence            9999873

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=95.17  E-value=0.087  Score=48.20  Aligned_cols=88  Identities=25%  Similarity=0.239  Sum_probs=61.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.  +.+. +..         .++.+.+.      ..|+|+.
T Consensus       143 l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~~---------~~l~ell~------~aDvV~~  203 (333)
T 1dxy_A          143 LGQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG--DHPD-FDY---------VSLEDLFK------QSDVIDL  203 (333)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS--CCTT-CEE---------CCHHHHHH------HCSEEEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCcchh--hHhc-ccc---------CCHHHHHh------cCCEEEE
Confidence            367899999999999999999999999 999999876543  2221 211         12322222      4799988


Q ss_pred             ccCChh----hH-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPS----LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~----~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +....+    .+ ...+..++++ +.++.++..
T Consensus       204 ~~P~~~~t~~li~~~~l~~mk~g-a~lIn~srg  235 (333)
T 1dxy_A          204 HVPGIEQNTHIINEAAFNLMKPG-AIVINTARP  235 (333)
T ss_dssp             CCCCCGGGTTSBCHHHHHHSCTT-EEEEECSCT
T ss_pred             cCCCchhHHHHhCHHHHhhCCCC-cEEEECCCC
Confidence            886432    12 4577888887 888888643

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=95.16  E-value=0.078  Score=48.48  Aligned_cols=86  Identities=23%  Similarity=0.258  Sum_probs=59.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.++++++.  +++. ..    .     .++.+.+.      ..|+|+.+
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~-----~~l~ell~------~aDvV~~~  205 (331)
T 1xdw_A          145 RNCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFEIKG--IEDY-CT----Q-----VSLDEVLE------KSDIITIH  205 (331)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCS--CTTT-CE----E-----CCHHHHHH------HCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCccHH--HHhc-cc----c-----CCHHHHHh------hCCEEEEe
Confidence            56799999999999999999999999 999999877653  2221 11    1     12333222      47898887


Q ss_pred             cCChh----hH-HHHHHhcccCCeEEEEEcc
Q 017201          270 TGVPS----LL-SEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       270 ~g~~~----~~-~~~~~~l~~~~G~iv~~g~  295 (375)
                      ....+    .+ ...+..++++ ..++.++.
T Consensus       206 ~p~t~~t~~li~~~~l~~mk~g-a~lin~sr  235 (331)
T 1xdw_A          206 APYIKENGAVVTRDFLKKMKDG-AILVNCAR  235 (331)
T ss_dssp             CCCCTTTCCSBCHHHHHTSCTT-EEEEECSC
T ss_pred             cCCchHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            65321    22 3567788887 88888873

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.15  E-value=0.05  Score=48.03  Aligned_cols=81  Identities=14%  Similarity=0.056  Sum_probs=49.5

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhc
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...+.++||+|+ |++|...++.+...|+ +|+++ .+++++.+.+    ++.+....   .|-.+  .+++.+.+.+..
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~   99 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN--AADIAAMFSAVD   99 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHH
Confidence            345789999988 9999998888888899 77666 6676665443    23343221   23332  123333333221


Q ss_pred             C-CCCccEEEEccC
Q 017201          259 H-GMGVDYCFECTG  271 (375)
Q Consensus       259 ~-~~g~d~vid~~g  271 (375)
                      . -.++|++|++.|
T Consensus       100 ~~~g~id~li~nAg  113 (272)
T 4e3z_A          100 RQFGRLDGLVNNAG  113 (272)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhCCCCCEEEECCC
Confidence            1 126999999987

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.13  E-value=0.061  Score=46.78  Aligned_cols=39  Identities=21%  Similarity=0.170  Sum_probs=30.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKE  229 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~  229 (375)
                      .++++||+|+ +++|...++.+...|+ +|+++ .++.++.+
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~   46 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAE   46 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHH
Confidence            5789999988 9999988888888898 78775 55555443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.12  E-value=0.059  Score=52.59  Aligned_cols=84  Identities=13%  Similarity=0.133  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCCh-------------hh----HHHhhhcCCcEEe---CCCC
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNP-------------WK----KEKGKAFGMTDFI---NPDD  244 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~-------------~~----~~~~~~lg~~~v~---~~~~  244 (375)
                      .++++.++||+|+ |++|...++.+...|+++|+.+ .+++             ++    .+.+++.|....+   |-.+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            4678899999988 9999987777777788557777 7763             22    1223445654322   3322


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                        .+.+.+.+.+......+|.||++.|.
T Consensus       327 --~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 --AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             --HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             --HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence              23344444444323369999999974

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.12  E-value=0.066  Score=47.36  Aligned_cols=97  Identities=20%  Similarity=0.232  Sum_probs=66.0

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc--CCcEEeCCCCCCcccHHHHHHhhcCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF--GMTDFINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l--g~~~v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .......++.+||-+|+|. |..+..+++ .+. +|++++.+++-.+.+++.  ....+.. +-   .+       +...
T Consensus        50 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~-d~---~~-------~~~~  115 (279)
T 3ccf_A           50 LQLLNPQPGEFILDLGCGT-GQLTEKIAQ-SGA-EVLGTDNAATMIEKARQNYPHLHFDVA-DA---RN-------FRVD  115 (279)
T ss_dssp             HHHHCCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHCTTSCEEEC-CT---TT-------CCCS
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHh-CCC-eEEEEECCHHHHHHHHhhCCCCEEEEC-Ch---hh-------CCcC
Confidence            3455678899999999874 777777777 676 999999999888877654  2222221 11   11       1112


Q ss_pred             CCccEEEEccCC------hhhHHHHHHhcccCCeEEEEEc
Q 017201          261 MGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       261 ~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ..||+|+....-      ...+..+.+.|+|+ |.++..-
T Consensus       116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~~  154 (279)
T 3ccf_A          116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSG-GRFVAEF  154 (279)
T ss_dssp             SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            369999865432      23678899999997 9887653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.12  E-value=0.046  Score=48.53  Aligned_cols=81  Identities=16%  Similarity=0.186  Sum_probs=49.5

Q ss_pred             CCCCEEEEECC-CH--HHHHHHHHHHHcCCCeEEEEcCCh--hhHHHhh-hcCCcEE--eCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GT--VGLGAVDGARMHGAAKIIGIDKNP--WKKEKGK-AFGMTDF--INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~--~G~~ai~la~~~G~~~V~~~~~~~--~~~~~~~-~lg~~~v--~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      -.+.++||+|+ |.  +|...++.+...|+ +|++++++.  +..+.+. +.+-..+  .|-.+  .+++.+.+.+... 
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVIS--DQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCC--HHHHHHHHHHHHHH
Confidence            45789999986 54  99987777778899 899999877  4444443 3332222  23333  2233333333211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -..+|++|++.|.
T Consensus       101 ~g~id~li~nAg~  113 (280)
T 3nrc_A          101 WDGLDAIVHSIAF  113 (280)
T ss_dssp             CSSCCEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            1269999999873

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.11  E-value=0.066  Score=49.16  Aligned_cols=76  Identities=18%  Similarity=0.116  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc----CCcEE-eCCCCCCcccHHHHHHhhcCCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMTDF-INPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g~~~v-~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++...+. .+    +...+ .|-.+  .+.+.+.+...    +
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~----~   80 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--QNKLLESIREF----Q   80 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--HHHHHHHHHHH----C
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccC--HHHHHHHHHhc----C
Confidence            3678999998 9999988888888898 9999998776543222 11    22222 23222  12222222222    5


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+||++.+.
T Consensus        81 ~d~vih~A~~   90 (357)
T 1rkx_A           81 PEIVFHMAAQ   90 (357)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            8999999883

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.11  E-value=0.051  Score=46.94  Aligned_cols=78  Identities=15%  Similarity=0.180  Sum_probs=48.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEE-EcCChhhHHHh----hhcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIG-IDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~-~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      |.++||+|+ |.+|...++.+...|+ +|++ ..+++++.+.+    ++.+... .  .|-.+  .+++.+.+.+... -
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            468999988 9999988888888898 8888 47777665433    2234322 1  23332  1233333332211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      .++|++|++.|
T Consensus        78 g~id~li~~Ag   88 (244)
T 1edo_A           78 GTIDVVVNNAG   88 (244)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            26999999987

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.11  E-value=0.064  Score=44.82  Aligned_cols=62  Identities=21%  Similarity=0.357  Sum_probs=42.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      ++||+|+ |.+|...++.+. .|+ +|++++++++          ....|-.+  .+.+.+.+.+.  + ++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~-~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN--IDSIKKMYEQV--G-KVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC--HHHHHHHHHHH--C-CEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC--HHHHHHHHHHh--C-CCCEEEECCC
Confidence            7999988 999998777777 898 8999988764          11223333  12333333333  2 6899999987

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.11  E-value=0.19  Score=45.96  Aligned_cols=132  Identities=13%  Similarity=0.055  Sum_probs=81.0

Q ss_pred             CCEEEEECCC-HHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          191 GSSVAVLGLG-TVGLGAVDGARMH--GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       191 g~~VlI~Gag-~~G~~ai~la~~~--G~~~V~-~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      --+|.|+|+| .+|...+...+..  ++ +++ ++++++++.+. ++++|...++.       ++.+.+.    ...+|+
T Consensus        18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~a~~~~~~~~~~-------~~~~ll~----~~~vD~   85 (340)
T 1zh8_A           18 KIRLGIVGCGIAARELHLPALKNLSHLF-EITAVTSRTRSHAEEFAKMVGNPAVFD-------SYEELLE----SGLVDA   85 (340)
T ss_dssp             CEEEEEECCSHHHHHTHHHHHHTTTTTE-EEEEEECSSHHHHHHHHHHHSSCEEES-------CHHHHHH----SSCCSE
T ss_pred             ceeEEEEecCHHHHHHHHHHHHhCCCce-EEEEEEcCCHHHHHHHHHHhCCCcccC-------CHHHHhc----CCCCCE
Confidence            3478999999 7888666666655  45 554 55566776654 45677644442       3333332    237999


Q ss_pred             EEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHH------h-hcCCceEEEEeeccccCCCCHHHHHHHHHc
Q 017201          266 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA------L-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKN  338 (375)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (375)
                      |+.++....+.+.+..++..+  +-+.+..+..    .+...      . -.+++.+.-.+  ..++...+..+.+++++
T Consensus        86 V~i~tp~~~H~~~~~~al~aG--khVl~EKPla----~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~  157 (340)
T 1zh8_A           86 VDLTLPVELNLPFIEKALRKG--VHVICEKPIS----TDVETGKKVVELSEKSEKTVYIAE--NFRHVPAFWKAKELVES  157 (340)
T ss_dssp             EEECCCGGGHHHHHHHHHHTT--CEEEEESSSS----SSHHHHHHHHHHHHHCSSCEEEEC--GGGGCHHHHHHHHHHHT
T ss_pred             EEEeCCchHHHHHHHHHHHCC--CcEEEeCCCC----CCHHHHHHHHHHHHHcCCeEEEEe--cccCCHHHHHHHHHHhc
Confidence            999998877888888888874  5566665432    22221      1 12444443222  23334557788888988


Q ss_pred             CCCC
Q 017201          339 KEFK  342 (375)
Q Consensus       339 ~~~~  342 (375)
                      |.+-
T Consensus       158 g~iG  161 (340)
T 1zh8_A          158 GAIG  161 (340)
T ss_dssp             TTTS
T ss_pred             CCCC
Confidence            8764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.10  E-value=0.042  Score=50.02  Aligned_cols=76  Identities=12%  Similarity=0.154  Sum_probs=47.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-h---h-c--CCcEE-eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---A-F--GMTDF-INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~-l--g~~~v-~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++.++.... +   . .  +...+ .|-.+  .+.+.+.+..    
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~----   76 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD--ERALARIFDA----   76 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC--HHHHHHHHHH----
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC--HHHHHHHHhc----
Confidence            4578999998 9999998888888898 999998876543221 1   1 1  22222 12222  1222222222    


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|+||++.+.
T Consensus        77 ~~~d~vih~A~~   88 (341)
T 3enk_A           77 HPITAAIHFAAL   88 (341)
T ss_dssp             SCCCEEEECCCC
T ss_pred             cCCcEEEECccc
Confidence            379999999874

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.08  E-value=0.047  Score=47.01  Aligned_cols=101  Identities=16%  Similarity=0.191  Sum_probs=66.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc---EEeCCCCCCcccHHHHHHhhc
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT---DFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~---~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +.......++.+||-+|+|. |..+..+++. |..+|++++.+++..+.+++....   .++..+-   .++     . .
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~-----~-~  103 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADL---DKL-----H-L  103 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCG---GGC-----C-C
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcCh---hhc-----c-C
Confidence            34455667899999999874 6677777776 555899999999888888764321   1221111   110     0 1


Q ss_pred             CCCCccEEEEccCC------hhhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ....+|+|+....-      ...+..+.++|+++ |+++..-
T Consensus       104 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          104 PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCceEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            23379999865431      23678889999997 9888653

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.08  E-value=0.042  Score=48.84  Aligned_cols=96  Identities=15%  Similarity=0.036  Sum_probs=64.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc------CC----cEEeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF------GM----TDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l------g~----~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ..+.+||++|+|. |..+..++++.+..+|++++.+++-.+.+++.      +.    -.++..      |..+.+.. .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~------D~~~~l~~-~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAK-S  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHT-C
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC------cHHHHHhh-C
Confidence            3568999998863 66777788776766999999999888777642      11    122222      22233332 2


Q ss_pred             CCCCccEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       ...||+|+-....          .+.++.+.+.|+++ |.++...
T Consensus       146 -~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          146 -ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             -CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             -CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence             2379998765432          34788999999997 9888763

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.06  E-value=0.096  Score=47.03  Aligned_cols=69  Identities=19%  Similarity=0.138  Sum_probs=46.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      .+|||+|+ |.+|...++.+...|. +|+++++++.+.+ ++  +...+. . +   -. .+.+.+...  ++|+||++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~~~~-~-D---l~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYEYRV-S-D---YT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCEEEE-C-C---CC-HHHHHHHTT--TCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceEEEE-c-c---cc-HHHHHHhhc--CCCEEEEcc
Confidence            58999998 9999998888888898 9999999855544 33  333322 2 2   12 444544444  699999998


Q ss_pred             CC
Q 017201          271 GV  272 (375)
Q Consensus       271 g~  272 (375)
                      +.
T Consensus        71 ~~   72 (311)
T 3m2p_A           71 AT   72 (311)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.06  E-value=0.049  Score=47.02  Aligned_cols=78  Identities=17%  Similarity=0.083  Sum_probs=48.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHhh----hcCCcE-E-e--CCCCCCcccHHHHHHhhcC-
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKGK----AFGMTD-F-I--NPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~~----~lg~~~-v-~--~~~~~~~~~~~~~i~~~~~-  259 (375)
                      ++++||+|+ |.+|...++.+...|+ +|+++ ++++++.+.+.    +.+... . +  |-.+  .+.+.+.+.+... 
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE--AEAATALVHQAAEV   77 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC--HHHHHHHHHHHHHh
Confidence            357999988 9999988888888898 88888 78877655432    223321 1 2  3332  1222222222211 


Q ss_pred             CCCccEEEEccC
Q 017201          260 GMGVDYCFECTG  271 (375)
Q Consensus       260 ~~g~d~vid~~g  271 (375)
                      -.++|++|++.|
T Consensus        78 ~~~~d~li~~Ag   89 (245)
T 2ph3_A           78 LGGLDTLVNNAG   89 (245)
T ss_dssp             HTCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            126999999987

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.05  E-value=0.059  Score=46.52  Aligned_cols=79  Identities=13%  Similarity=0.053  Sum_probs=48.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCC------eEEEEcCChhhHHHhh-h---cCCcE-E--eCCCCCCcccHHHHHHh
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAA------KIIGIDKNPWKKEKGK-A---FGMTD-F--INPDDEPNKSISELVKG  256 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~------~V~~~~~~~~~~~~~~-~---lg~~~-v--~~~~~~~~~~~~~~i~~  256 (375)
                      +++|||+|+ |.+|...++.+...|+.      +|+++++++++.+.+. +   .+... +  .|-.+  .+.+.+.+.+
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC--HHHHHHHHHH
Confidence            568999988 99999877777677874      7999999887765442 1   23322 1  23332  1223333332


Q ss_pred             hcC-CCCccEEEEccC
Q 017201          257 ITH-GMGVDYCFECTG  271 (375)
Q Consensus       257 ~~~-~~g~d~vid~~g  271 (375)
                      ... ..++|++|++.|
T Consensus        80 ~~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHHTSCCSEEEECCC
T ss_pred             HHHhCCCCCEEEEcCC
Confidence            211 126999999987

>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}

Probab=95.04  E-value=0.039  Score=50.75  Aligned_cols=134  Identities=14%  Similarity=0.184  Sum_probs=77.0

Q ss_pred             EEEEECCCHHHH-HHHH-HHH-HcCCCeEE-EEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGL-GAVD-GAR-MHGAAKII-GIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~-~ai~-la~-~~G~~~V~-~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|. ..+. +.+ .-++ +++ ++++++++.+.+.+++...++.       ++.+.+    ...++|+|+.
T Consensus         4 rvgiiG~G~~g~~~~~~~~~~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~ll----~~~~~D~V~i   71 (345)
T 3f4l_A            4 NCAFIGFGKSTTRYHLPYVLNRKDSW-HVAHIFRRHAKPEEQAPIYSHIHFTS-------DLDEVL----NDPDVKLVVV   71 (345)
T ss_dssp             EEEEECCSHHHHHHTHHHHTTCTTTE-EEEEEECSSCCGGGGSGGGTTCEEES-------CTHHHH----TCTTEEEEEE
T ss_pred             EEEEEecCHHHHHHHHHHHHhcCCCe-EEEEEEcCCHhHHHHHHhcCCCceEC-------CHHHHh----cCCCCCEEEE
Confidence            689999999997 4666 423 3466 666 5556666665555554333332       222222    2337999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      ++....+.+.+..++..+  +-+++..+.. ... ...+... -.+++.+.-.+  +.+....+..+.+++++|.+-
T Consensus        72 ~tp~~~h~~~~~~al~aG--k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  144 (345)
T 3f4l_A           72 CTHADSHFEYAKRALEAG--KNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQ--NRRFDSCFLTAKKAIESGKLG  144 (345)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--GGGGCHHHHHHHHHHHHSTTC
T ss_pred             cCChHHHHHHHHHHHHcC--CcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe--chhcCHHHHHHHHHHhcCCCC
Confidence            998887888888888874  5566654432 000 0011111 12344443221  223344567788888887763

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.03  E-value=0.043  Score=49.10  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=31.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ...+|||+|+|++|..+++.+.+.|..+++.++.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            557999999999999998888888988999998664

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=95.02  E-value=0.11  Score=44.64  Aligned_cols=101  Identities=15%  Similarity=0.166  Sum_probs=63.3

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhh----HHHhhhcCCcEEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWK----KEKGKAFGMTDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~----~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +...++++++||-+|+|. |..+..+++..| ..+|++++.+++.    .+.++......++..+-   .+.. .+ ...
T Consensus        71 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~---~~~~-~~-~~~  144 (233)
T 2ipx_A           71 DQIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDA---RHPH-KY-RML  144 (233)
T ss_dssp             SCCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCT---TCGG-GG-GGG
T ss_pred             heecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEccc---CChh-hh-ccc
Confidence            345688999999999975 888889998874 2399999999653    33333322222232221   1110 01 112


Q ss_pred             CCCCccEEEEccCChh----hHHHHHHhcccCCeEEEE
Q 017201          259 HGMGVDYCFECTGVPS----LLSEALETTKVGKGKVIV  292 (375)
Q Consensus       259 ~~~g~d~vid~~g~~~----~~~~~~~~l~~~~G~iv~  292 (375)
                      . ..+|+|+.....+.    .+..+.+.|+++ |.++.
T Consensus       145 ~-~~~D~V~~~~~~~~~~~~~~~~~~~~Lkpg-G~l~i  180 (233)
T 2ipx_A          145 I-AMVDVIFADVAQPDQTRIVALNAHTFLRNG-GHFVI  180 (233)
T ss_dssp             C-CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             C-CcEEEEEEcCCCccHHHHHHHHHHHHcCCC-eEEEE
Confidence            2 36999987655331    256788999997 88876

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.01  E-value=0.032  Score=49.09  Aligned_cols=77  Identities=13%  Similarity=0.164  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcC-CCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITH-GMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~-~~g~d~v  266 (375)
                      .++++||+|+ |++|...++.+...|+ +|++++++.++.+..   .+..+ .|-.+  .+++.+.+.+... -.++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DIHTVAGDISK--PETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TEEEEESCTTS--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ceEEEEccCCC--HHHHHHHHHHHHHHCCCCCEE
Confidence            5789999988 9999988888888899 999999876654321   22211 23322  1223222222211 1169999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      |++.|.
T Consensus       101 v~nAg~  106 (260)
T 3un1_A          101 VNNAGV  106 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.01  E-value=0.074  Score=47.77  Aligned_cols=96  Identities=13%  Similarity=0.089  Sum_probs=62.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC------C----cEEeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG------M----TDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg------~----~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ..+.+||++|+|. |..+..++++.+..+|++++.+++-.+.+++.-      .    -.++.      .|..+.+.. .
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~-~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE------CcHHHHHhh-C
Confidence            3568999998864 667778888766559999999998887776421      1    11221      233333322 2


Q ss_pred             CCCCccEEEEccCC-----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCFECTGV-----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       ...||+|+-....           .+.++.+.+.|+++ |.++...
T Consensus       161 -~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          161 -KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             -SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             -CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence             2369998743211           34678899999997 9888764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.01  E-value=0.044  Score=48.49  Aligned_cols=95  Identities=17%  Similarity=0.212  Sum_probs=57.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+...+...+. |..+   .+   .+.+...  ++|+||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d---~~---~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD---EA---ALTSALQ--GVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC---HH---HHHHHTT--TCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC---HH---HHHHHHh--CCCEEEE
Confidence            4899998 99999888777776  87 899999988776555444554332 3322   22   2333332  5899999


Q ss_pred             ccCCh-----hhHHHHHHhcccC-CeEEEEEccC
Q 017201          269 CTGVP-----SLLSEALETTKVG-KGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~-----~~~~~~~~~l~~~-~G~iv~~g~~  296 (375)
                      +.+..     ......++.+... -++++.++..
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            98742     1223333433322 1578877654

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.00  E-value=0.037  Score=48.15  Aligned_cols=102  Identities=14%  Similarity=0.094  Sum_probs=64.8

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhh----hcCCc---EEeCCCCCCcccHHHHHHh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~~i~~  256 (375)
                      .....++.+||-+|+|. |..++.+|+.++ ..+|++++.+++..+.++    ..|..   .++..      +..+.+..
T Consensus        55 l~~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g------da~~~l~~  127 (242)
T 3r3h_A           55 LIRLTRAKKVLELGTFT-GYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLG------PALDTLHS  127 (242)
T ss_dssp             HHHHHTCSEEEEEESCC-SHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEES------CHHHHHHH
T ss_pred             HHhhcCcCEEEEeeCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc------CHHHHHHH
Confidence            34556788999999863 777788888763 239999999987765543    34542   22222      23233332


Q ss_pred             hc---CCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          257 IT---HGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~---~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +.   ....||+||-.....   ..++.+.++|+++ |.++.-.
T Consensus       128 ~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  170 (242)
T 3r3h_A          128 LLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPK-GLIAIDN  170 (242)
T ss_dssp             HHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCC-eEEEEEC
Confidence            21   123799986544322   3577899999997 9888743

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.00  E-value=0.044  Score=48.92  Aligned_cols=97  Identities=12%  Similarity=0.090  Sum_probs=64.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CC-------c--EEeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM-------T--DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~-------~--~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++. ..       .  .++.      .|..+.+...
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~~  148 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI------EDASKFLENV  148 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE------SCHHHHHHHC
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE------CChHHHHHhC
Confidence            45678999998863 66677777776545999999999888877652 11       1  1221      2333333332


Q ss_pred             cCCCCccEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                        ...||+|+-....          .+.++.+.+.|+++ |.++...
T Consensus       149 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  192 (283)
T 2i7c_A          149 --TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  192 (283)
T ss_dssp             --CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             --CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEC
Confidence              3379998753211          34678899999997 9988764

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=94.99  E-value=0.03  Score=53.59  Aligned_cols=104  Identities=20%  Similarity=0.227  Sum_probs=67.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG  256 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~  256 (375)
                      ....+++|++||-+|+|+ |..+.++++.++. .+|++++.++.+.+.+++    +|...  ++..+.   .++    ..
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~---~~~----~~  324 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDA---RKA----PE  324 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCT---TCC----SS
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcCh---hhc----ch
Confidence            345788999999998876 6677788887643 499999999999877653    46532  232221   111    00


Q ss_pred             hcCCCCccEEEE---ccCC-------------------------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          257 ITHGMGVDYCFE---CTGV-------------------------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       257 ~~~~~g~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ...+..||.|+-   |+|.                         ...+..+.++|+++ |+++....+
T Consensus       325 ~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvy~tcs  391 (450)
T 2yxl_A          325 IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG-GRLLYTTCS  391 (450)
T ss_dssp             SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE-EEEEEEESC
T ss_pred             hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence            011136999874   3332                         23577889999997 998866443

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=94.99  E-value=0.1  Score=46.61  Aligned_cols=74  Identities=12%  Similarity=0.105  Sum_probs=51.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.|+|+|.+|...+..+...|. +|++.+ ++++.+.+.+.|...   .     .+..+.+.      ..|+||-++.
T Consensus         4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-~~~~~~~~~~~g~~~---~-----~~~~~~~~------~~D~vi~~vp   67 (295)
T 1yb4_A            4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT-IGPVADELLSLGAVN---V-----ETARQVTE------FADIIFIMVP   67 (295)
T ss_dssp             CEEEECCCSTTHHHHHHHHHHTTC-EEEECC-SSCCCHHHHTTTCBC---C-----SSHHHHHH------TCSEEEECCS
T ss_pred             CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc-CHHHHHHHHHcCCcc---c-----CCHHHHHh------cCCEEEEECC
Confidence            379999999999987777777788 899988 888877776655421   1     12332221      4789999987


Q ss_pred             ChhhHHHHHH
Q 017201          272 VPSLLSEALE  281 (375)
Q Consensus       272 ~~~~~~~~~~  281 (375)
                      .+..+...+.
T Consensus        68 ~~~~~~~v~~   77 (295)
T 1yb4_A           68 DTPQVEDVLF   77 (295)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHh
Confidence            7654555554

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=94.98  E-value=0.25  Score=44.36  Aligned_cols=46  Identities=20%  Similarity=0.166  Sum_probs=36.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      ++|-++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.|+..
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~Ga~~   49 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASA   49 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHcCCEE
Confidence            378999999999854444445688 9999999999999888888653

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=94.98  E-value=0.058  Score=45.06  Aligned_cols=95  Identities=19%  Similarity=0.255  Sum_probs=62.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc-EEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-DFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      +.++ +||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    +.. .++..+-   .++     .. ....
T Consensus        28 ~~~~-~vLdiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----~~-~~~~   94 (202)
T 2kw5_A           28 IPQG-KILCLAEGE-GRNACFLASL-GY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL---ADF-----DI-VADA   94 (202)
T ss_dssp             SCSS-EEEECCCSC-THHHHHHHTT-TC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT---TTB-----SC-CTTT
T ss_pred             CCCC-CEEEECCCC-CHhHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh---hhc-----CC-CcCC
Confidence            5677 999999875 7777777775 77 999999999888777643    222 1222111   111     11 2237


Q ss_pred             ccEEEEccCC------hhhHHHHHHhcccCCeEEEEEccC
Q 017201          263 VDYCFECTGV------PSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       263 ~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +|+|+.+...      ...+..+.++|+++ |.++.....
T Consensus        95 fD~v~~~~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  133 (202)
T 2kw5_A           95 WEGIVSIFCHLPSSLRQQLYPKVYQGLKPG-GVFILEGFA  133 (202)
T ss_dssp             CSEEEEECCCCCHHHHHHHHHHHHTTCCSS-EEEEEEEEC
T ss_pred             ccEEEEEhhcCCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            9999875421      23577888999997 998877543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.97  E-value=0.033  Score=49.38  Aligned_cols=79  Identities=23%  Similarity=0.284  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE-E--eCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.    +.+... +  .|-.+  .+++.+.+.+... -
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD--PKSVEETISQQEKDF  109 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC--HHHHHHHHHHHHHHh
Confidence            4789999988 9999987777777798 8999998876654332    234322 1  23332  1223333322211 1


Q ss_pred             CCccEEEEccC
Q 017201          261 MGVDYCFECTG  271 (375)
Q Consensus       261 ~g~d~vid~~g  271 (375)
                      ..+|++|++.|
T Consensus       110 g~id~li~~Ag  120 (279)
T 3ctm_A          110 GTIDVFVANAG  120 (279)
T ss_dssp             SCCSEEEECGG
T ss_pred             CCCCEEEECCc
Confidence            15999999886

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=94.97  E-value=0.086  Score=47.56  Aligned_cols=97  Identities=14%  Similarity=0.088  Sum_probs=63.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc------CC----cEEeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF------GM----TDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l------g~----~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ...+.+||++|+|. |..+..++++.+..+|++++.+++-.+.+++.      +.    -.++.      .+..+.+.. 
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~------~Da~~~l~~-  164 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQ-  164 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHT-
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHhh-
Confidence            45678999998863 66777888876545999999999888777642      11    11221      233333332 


Q ss_pred             cCCCCccEEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      . ...||+||-....          .+.++.+.++|+++ |.++.-.
T Consensus       165 ~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          165 N-QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             C-SSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             C-CCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            2 2379998743322          23688899999997 9888654

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=94.97  E-value=0.08  Score=45.13  Aligned_cols=97  Identities=20%  Similarity=0.343  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CC-------cEEeCCCCCCcccHHHHHH
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GM-------TDFINPDDEPNKSISELVK  255 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~-------~~v~~~~~~~~~~~~~~i~  255 (375)
                      .++++++||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    +.       ..++..+.   .++     
T Consensus        27 ~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~---~~~-----   95 (235)
T 3sm3_A           27 YLQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA---SSL-----   95 (235)
T ss_dssp             HCCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT---TSC-----
T ss_pred             hCCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc---ccc-----
Confidence            356899999999974 7777788877 77 999999999888877652    22       11221111   110     


Q ss_pred             hhcCCCCccEEEEccC-----Ch----hhHHHHHHhcccCCeEEEEEccC
Q 017201          256 GITHGMGVDYCFECTG-----VP----SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g-----~~----~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .. ....+|+|+-...     ..    ..+..+.+.|+++ |+++.....
T Consensus        96 ~~-~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  143 (235)
T 3sm3_A           96 SF-HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG-AYLYLVEFG  143 (235)
T ss_dssp             CS-CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE-EEEEEEEEB
T ss_pred             CC-CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC-eEEEEEECC
Confidence            01 1337999985432     22    3678899999997 998887543

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=94.97  E-value=0.04  Score=48.70  Aligned_cols=96  Identities=23%  Similarity=0.255  Sum_probs=63.6

Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECCC-HHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG-TVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag-~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      .+||+...+...+.+..---.|.+++|+|.| .+|..+++++...  |+ +|+++.+..                     
T Consensus       137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a-tVtv~h~~t---------------------  194 (281)
T 2c2x_A          137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENA-TVTLCHTGT---------------------  194 (281)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCC-EEEEECTTC---------------------
T ss_pred             CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCC-EEEEEECch---------------------
Confidence            4555544444433333224589999999997 4699988988888  77 888875332                     


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       .++.+.++      .+|+||.++|.+..+..  ..++++ ..++.+|...
T Consensus       195 -~~L~~~~~------~ADIVI~Avg~p~~I~~--~~vk~G-avVIDVgi~r  235 (281)
T 2c2x_A          195 -RDLPALTR------QADIVVAAVGVAHLLTA--DMVRPG-AAVIDVGVSR  235 (281)
T ss_dssp             -SCHHHHHT------TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCEEE
T ss_pred             -hHHHHHHh------hCCEEEECCCCCcccCH--HHcCCC-cEEEEccCCC
Confidence             23333332      58999999998744322  346886 8888888664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	375
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-37
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	4e-37
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	6e-37
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	8e-37
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	8e-35
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	3e-33
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-33
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-30
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-29
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-28
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-26
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-25
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-23
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-23
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	8e-21
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-20
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	4e-20
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	4e-18
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	5e-18
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-17
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-17
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	3e-17
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-16
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	6e-16
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-15
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	6e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	2e-14
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	5e-13
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	8e-13
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	3e-12
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	4e-10
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	4e-08
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	2e-07
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	2e-07
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	4e-07
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	6e-07
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-06
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	5e-06
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	2e-04
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	0.001

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  131 bits (331), Expect = 2e-37
 Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 2/195 (1%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +PL +EEI+V+ P + E+R+K++   VCHTD+             V
Sbjct: 5   KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64

Query: 65  -LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLM 122
            LGHEG G+VES G  V E + G+ VIP +I +C EC  C S  TN C+K        +M
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 182
               +R + +G+K+      ST+S+Y V++   V K+DPS+   +         +   A 
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAI 184

Query: 183 WKEAKVEKGSSVAVL 197
                 +   +V  L
Sbjct: 185 DLMKHGKCIRTVLSL 199

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  131 bits (329), Expect = 4e-37
 Identities = 69/201 (34%), Positives = 103/201 (51%), Gaps = 11/201 (5%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + ITCKA V W   +PL +E I V PPK+ EVR+K+L + +C +D    +      +P +
Sbjct: 5   KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVI 64

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML- 123
           LGHE VGVVES G  V  VK GD VIP ++ +C  C  C S  +N C K  +     ++ 
Sbjct: 65  LGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA 124

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ +Y++   ST++EY V+    V K+DP I+ +                 
Sbjct: 125 DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL-------- 176

Query: 184 KEAKVEKGSSVAVLGLGTVGL 204
              ++ K   +   G G   +
Sbjct: 177 --DQINKAFELLSSGQGVRSI 195

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  130 bits (328), Expect = 6e-37
 Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 2/196 (1%)

Query: 4   SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPR 63
           ++ I CKA V W  G+PL +EEI+V PPK+ EVR+K++  +VCHTD     G        
Sbjct: 2   NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61

Query: 64  V-LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGL 121
           V LGH G G+VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GL
Sbjct: 62  VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D TSR + +G+ + H    ST+SEY V+    V K+DP I   +    +  F     A
Sbjct: 122 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKA 181

Query: 182 AWKEAKVEKGSSVAVL 197
                  +   +V  +
Sbjct: 182 FELMHSGKSIRTVVKI 197

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  130 bits (327), Expect = 8e-37
 Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 8/197 (4%)

Query: 7   ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLG 66
           I CKA + W  G PL +EEI+V PPK+ EVR++++   VC TDI  ++     L+P VLG
Sbjct: 7   IKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLG 66

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK-----YPIALNGL 121
           HE  G+VES G  V   K GD VIP +  +CK C+ C S +TNLC K     YP     L
Sbjct: 67  HECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQEL 126

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
           M D TSR + +G+ +YH    S++S+Y V+    + +VD   D       +  F +   A
Sbjct: 127 MEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDA 186

Query: 182 AWKEAKVEKGSSVAVLG 198
                 +++G S+  + 
Sbjct: 187 I---DLMKEGKSIRTIL 200

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  124 bits (313), Expect = 8e-35
 Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 4/195 (2%)

Query: 5   QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRV 64
           + I CKA V W   +P  +EE++V PPK+ EVR+KM+   +C +D     G      P +
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML 123
            GHE  G+VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124

Query: 124 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 183
           D TSR + RG+ ++H    ST+S+Y V+D   V K+D +   +    ++           
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF--ALDPLITHVLPFEKINEG 182

Query: 184 KEAKVEKGSSVAVLG 198
               +  G S+  + 
Sbjct: 183 -FDLLRSGESIRTIL 196

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  119 bits (300), Expect = 3e-33
 Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 5/177 (2%)

Query: 165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 224
           P ++  + CGF TGYGAA   AKV  GS+ AV GLG VG  A+ G +  GA++IIG+  +
Sbjct: 2   PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 225 PWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 284
             K  K    G T+ +NP D  +K I E++   T+G GVDY  EC G    +  AL++T 
Sbjct: 62  KDKFPKAIELGATECLNPKDY-DKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTY 119

Query: 285 VGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 340
            G G  +V+G+   +  +PL+ + L   GR+LKG+ FGG K + ++  L+D    K+
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLL-TGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  119 bits (300), Expect = 3e-33
 Identities = 68/178 (38%), Positives = 92/178 (51%), Gaps = 2/178 (1%)

Query: 162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI 221
           +  P     + CGF+TGYGAA K  KV+ GS+  V GLG VGL  + G +  GA++IIGI
Sbjct: 1   AAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGI 60

Query: 222 DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 281
           D N  K EK  A G T+ I+P D         V     G  V Y FE  G    + +AL 
Sbjct: 61  DLNKDKFEKAMAVGATECISPKDSTK--PISEVLSEMTGNNVGYTFEVIGHLETMIDALA 118

Query: 282 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 339
           +  +  G  +V+GV   A +      L   GRT KG  FGG+K++ D+P L+ +   K
Sbjct: 119 SCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  112 bits (281), Expect = 2e-30
 Identities = 69/177 (38%), Positives = 93/177 (52%), Gaps = 4/177 (2%)

Query: 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK 223
           +      + CGF++GYGAA   AKV  GS+ AV GLG VGL A+ G ++ GA++II ID 
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 283
           N  K  K KA G TD +NP +                 GVDY  +C G    L  A++ T
Sbjct: 62  NGEKFPKAKALGATDCLNPRELDKPVQDV--ITELTAGGVDYSLDCAGTAQTLKAAVDCT 119

Query: 284 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 340
            +G G   V+G  VD M    V  +   GR++ GT FGG K+   +P L+   KNK+
Sbjct: 120 VLGWGSCTVVGAKVDEMTIPTVDVIL--GRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  109 bits (273), Expect = 2e-29
 Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 2/173 (1%)

Query: 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 227
              + CGF+TGYG+A K AKV +GS+ AV GLG VGL  + G +  GAA+IIG+D N  K
Sbjct: 6   VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 65

Query: 228 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 287
             K K  G T+ +NP D   K I E++  +++G GVD+ FE  G    +  AL   +   
Sbjct: 66  FAKAKEVGATECVNPQDYK-KPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 123

Query: 288 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 340
           G  +++GV  D+        L   GRT KG  FGG K+K  +P L+     K+
Sbjct: 124 GVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 2/173 (1%)

Query: 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 227
              L CG +TGYGAA   AK+E GS  AV GLG VGL  + G ++ GA++IIG+D N  K
Sbjct: 6   VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 65

Query: 228 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 287
             + K FG T+ INP D        L++      GVDY FEC G   ++  ALE    G 
Sbjct: 66  FARAKEFGATECINPQDFSKPIQEVLIE--MTDGGVDYSFECIGNVKVMRAALEACHKGW 123

Query: 288 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 340
           G  +V+GV                GRT KGT FGG K+   +P L+ +  +K+
Sbjct: 124 GVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  101 bits (253), Expect = 3e-26
 Identities = 48/217 (22%), Positives = 84/217 (38%), Gaps = 29/217 (13%)

Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGH 67
              A V    G   +++ +++  P+  EV VK++   +CHTD++  +       P VLGH
Sbjct: 3   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGH 62

Query: 68  EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDST 126
           EG G++E+ G  V E++ GD V+ +Y   C +C  C +     C ++     +G   +  
Sbjct: 63  EGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGN 121

Query: 127 SRMSVRGQKLY--HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
             +    Q +   H F+ S+++ Y +   N  VKV                         
Sbjct: 122 HALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL---------------- 165

Query: 185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI 221
                    V       +   A+D  +      II I
Sbjct: 166 ---------VKFYAFDEINQAAIDSRKGITLKPIIKI 193

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 99.2 bits (246), Expect = 2e-25
 Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 222
           +       L CG  TG GA     KV   SS    G G VGL A+  A++ GA+ II +D
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 223 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 282
               + E  K  G T  IN   +        +K IT G GV++  E TG P +L + ++ 
Sbjct: 61  IVESRLELAKQLGATHVINSKTQ---DPVAAIKEITDG-GVNFALESTGSPEILKQGVDA 116

Query: 283 TKVGKGKVIVIGVG-VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 334
             +  GK+ V+G   +      +V  L  GG+T+ G   G    K  +P L+ 
Sbjct: 117 LGI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVR 168

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 93.9 bits (232), Expect = 2e-23
 Identities = 72/173 (41%), Positives = 93/173 (53%), Gaps = 3/173 (1%)

Query: 168 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 227
              L CG +TG+GAA   AKVE GS+ AV GLG VGL AV G    GA +II +D NP K
Sbjct: 6   VCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDK 65

Query: 228 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 287
            EK K FG TDF+NP+D        L K    G+  D+  EC G   ++  ALE+   G 
Sbjct: 66  FEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV--DFSLECVGNVGVMRNALESCLKGW 123

Query: 288 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 340
           G  +++G      V    I L   GRT KG+ FGG K K  +P ++    +K+
Sbjct: 124 GVSVLVGWTDLHDVATRPIQLI-AGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 93.4 bits (231), Expect = 2e-23
 Identities = 54/193 (27%), Positives = 77/193 (39%), Gaps = 25/193 (12%)

Query: 8   TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAP--LYPRVL 65
           T KA V    G PL++EE++V  P   +V VK+  + VCHTD+  +EG        P + 
Sbjct: 5   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64

Query: 66  GHEGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           GHEGVG V + G  V  VKEGD V IP     C  CE+C +    LC             
Sbjct: 65  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN-------- 116

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                               ++EY++ D NYV  +  ++  +                  
Sbjct: 117 ------------TGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-- 162

Query: 185 EAKVEKGSSVAVL 197
            A   +G  V  +
Sbjct: 163 RAGQIEGRIVLEM 175

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.2 bits (215), Expect = 8e-21
 Identities = 33/192 (17%), Positives = 71/192 (36%), Gaps = 19/192 (9%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPP--KSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRVLG 66
           + +      +    ++ + +P      ++ +K+    VC +DI C+ G +     P V+G
Sbjct: 8   EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVG 67

Query: 67  HEGVGVVESAGDEVKE-VKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           HE VG V   G +    +K G  + +   +  C EC+ C ++    C K+    +    D
Sbjct: 68  HEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYED 127

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                           S   ++ Y+ +  ++VV +  +I          G    +    +
Sbjct: 128 -------------GYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF-ERME 173

Query: 185 EAKVEKGSSVAV 196
           +  V    ++  
Sbjct: 174 KGDVRYRFTLVG 185

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 85.4 bits (210), Expect = 2e-20
 Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 15/189 (7%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC-SEGFPAPLYPRVLGHE 68
           KAV  +   +PL+  +I    P   +V++++ Y  VCH+D+      +   +YP V GHE
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 69  GVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
            VG V + GD+V++   GD+V +   +  CK CE C   + N C       N    D   
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPG 121

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAAWKEA 186
                        +   +S+ +V+   YV+++  +      A  ++  +        K  
Sbjct: 122 ------------HTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKYR 169

Query: 187 KVEKGSSVA 195
            V    ++ 
Sbjct: 170 FVIDNRTLT 178

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 84.6 bits (208), Expect = 4e-20
 Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 8/170 (4%)

Query: 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 226
           +A  ++   TTG+  A + A +E GSSV V+G+G VGL  + GA++ GA +IIG+   P 
Sbjct: 5   NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPI 63

Query: 227 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 286
             E  K +G TD +N  +   +   + V  +T+G GVD      G    LS+A++  K G
Sbjct: 64  CVEAAKFYGATDILNYKNGHIE---DQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 120

Query: 287 KGKVIVIGV-GVDAMVPLNVIALACG--GRTLKGTTFGGIKTKSDLPTLL 333
            G +  I   G    + +  +   CG   +T+KG    G + +++    +
Sbjct: 121 -GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDM 169

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 79.6 bits (195), Expect = 4e-18
 Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 25/215 (11%)

Query: 10  KAVVCWGLGEPLKVEEIQV-------EPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYP 62
           + VV  G G+ ++V++I                V +K++  ++C +D     G       
Sbjct: 3   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61

Query: 63  RVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 122
            VLGHE  G V   G +V+ ++ GD+V   +   C  C +C    T +CL    A  G  
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 123 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYG 180
                                  +EY+++      ++K+       +   ++        
Sbjct: 122 YGYVDMGDW----------TGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVI 171

Query: 181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA 215
           +    A    G        G      +D  +   A
Sbjct: 172 SLDD-APRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 78.9 bits (193), Expect = 5e-18
 Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 25/192 (13%)

Query: 11  AVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG----FPAPLYPRVLG 66
           + V +   + L++E+  +  PK  EV ++M Y  +C +D+   E           P V+G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 67  HEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           HE  G V   G  VK +K+GD V       C+ C+ C     NLC               
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--------- 113

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 186
                              + Y V  A++  K+  + +       S         A++ A
Sbjct: 114 ----------ATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFEAA 162

Query: 187 KVEKGSSVAVLG 198
           + +  +++ V+ 
Sbjct: 163 RKKADNTIKVMI 174

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 78.4 bits (192), Expect = 1e-17
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 29/193 (15%)

Query: 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 226
           D + LS    TGY  A   A V  GS+V V G G VGL A   AR+ GAA +I  D NP 
Sbjct: 3   DLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA 61

Query: 227 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV-------------- 272
           +    KA G        D P   + E +  +     VD   +  G               
Sbjct: 62  RLAHAKAQGFEIADLSLDTP---LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 118

Query: 273 -PSLLSEALETTKVGKGKVIVIGV-------GVDAMVPLNVIALACGGRTLKGTTFGGIK 324
             ++L+  ++ T+V  GK+ + G+        VDA   +  +++  G    K  +F   +
Sbjct: 119 PATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQ 177

Query: 325 T--KSDLPTLLDK 335
           T        L+  
Sbjct: 178 TPVMKYNRALMQA 190

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 77.3 bits (189), Expect = 2e-17
 Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 32/197 (16%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPL--------- 60
           +AV    +G+PL ++EI V  PK  +V +K+  A VCH+D+   +G    L         
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 61  YPRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG 120
            P  LGHE  G +E  GDEV    +GD+V          C  C     +LC         
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLC--------- 112

Query: 121 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPSDASFLSCGFTTGY 179
                         +   I     ++EY+++    Y+ K+         +          
Sbjct: 113 -----------DSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAI 161

Query: 180 GAAWKEAKVEKGSSVAV 196
                   +  G  V +
Sbjct: 162 DNLENFKAI--GRQVLI 176

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.8 bits (188), Expect = 3e-17
 Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 27/199 (13%)

Query: 6   AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRV 64
            +   A+V     +PL  +E ++       + V++L A VC +D+ +     P    P +
Sbjct: 2   GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 61

Query: 65  LGHEGVGVVESAGDEVKEVKEGD-----IVIPTYIGECKECENC-TSEMTNLCLKYPIAL 118
           LGHEG G V     E +++         +++      C EC  C  S+   LC      +
Sbjct: 62  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNR--KV 119

Query: 119 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVKVDPSIDPSDASFLSCGFTT 177
            G+    +    +RG           +S ++V+D    V+KV   I       L      
Sbjct: 120 YGINRGCSEYPHLRG----------CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN-- 165

Query: 178 GYGAAWKEAKVEKGSSVAV 196
               A +  +  +   V +
Sbjct: 166 ---KALELMESREALKVIL 181

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (182), Expect = 2e-16
 Identities = 39/193 (20%), Positives = 62/193 (32%), Gaps = 31/193 (16%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC----SEGFPAPLYPRVL 65
            ++V  G G+ L++E   +  P   EV ++M    +C +D+        G      P VL
Sbjct: 9   LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           GHE  G VE  G  VK +K GD V        +  E C     NL               
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATP----- 122

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF--LSCGFTTGYGAAW 183
                                 +   +A +  K+  ++ P       L          A+
Sbjct: 123 --------------PDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALE-----AF 163

Query: 184 KEAKVEKGSSVAV 196
           +  K   G  + +
Sbjct: 164 ETFKKGLGLKIML 176

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 72.8 bits (177), Expect = 6e-16
 Identities = 39/192 (20%), Positives = 67/192 (34%), Gaps = 27/192 (14%)

Query: 10  KAVVCWGLGEPLKVEEIQV-EPPKSTEVRVKMLYASVCHTDILCSEG----FPAPLYPRV 64
           KA       +PL++E++         +V V++  A VCHTD+   +G       P  P  
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 65  LGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 124
           LGHE VG +E   + V+ +++GD VI         C  C +     C             
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHC------------- 107

Query: 125 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 184
                     +   +     ++E+M      V+K+   +                    K
Sbjct: 108 -------ENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEK 160

Query: 185 EAKVEKGSSVAV 196
             +V  G +V +
Sbjct: 161 -GEV-LGRAVLI 170

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 71.9 bits (175), Expect = 2e-15
 Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 3/174 (1%)

Query: 164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK 223
           D    +   C   T Y A  +  +   G +V + G G +GL  V  AR  GA  +I I  
Sbjct: 2   DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 61

Query: 224 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 283
           +P + +  +  G    +N  +   +   + +  ITHG G D+  E TG    L E  E  
Sbjct: 62  SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121

Query: 284 KVGKGKVIVIGVGV-DAMVPLNVIALACG-GRTLKGTTFGGIKTKSDLPTLLDK 335
           + G G   V GV V    VP  V         T KG             ++  +
Sbjct: 122 RRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR 174

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 70.0 bits (170), Expect = 6e-15
 Identities = 51/194 (26%), Positives = 69/194 (35%), Gaps = 31/194 (15%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVL--GH 67
           KA V     EPLK++E++       EV V++    VCHTD+  + G         L  GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 68  EGVGVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 126
           EGVG+VE  G  V  +K GD V IP     C  C+ C S    LC               
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---------- 111

Query: 127 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF--LSCGFTTGYGAAWK 184
                             ++EY    A+YVVK+  +          ++  F         
Sbjct: 112 ----------AGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQI- 160

Query: 185 EAKVEKGSSVAVLG 198
                 G  V  L 
Sbjct: 161 -----NGRVVLTLE 169

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 68.4 bits (166), Expect = 2e-14
 Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 11/169 (6%)

Query: 167 DASFLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 225
           + + L+    T Y A  K A+ +  G+ VA++G+G +G  AV   ++   A +I +D   
Sbjct: 8   EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKE 67

Query: 226 WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 285
            K +  +  G    ++   +P     + V  +T G GV+   +  G  + +         
Sbjct: 68  EKLKLAERLGADHVVDARRDP----VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGR 123

Query: 286 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 334
             G++I++G G +   P   +       + +G+  G      +L  L+ 
Sbjct: 124 M-GRLIIVGYGGELRFPTIRVIS--SEVSFEGSLVGNYV---ELHELVT 166

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 64.2 bits (155), Expect = 5e-13
 Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG 220
           P    +  + L C   T Y    +  +   G  V V+G+G +G            A ++ 
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLG-HMGIKLAHAMGAHVVA 59

Query: 221 IDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 280
              +  K+E  KA G  + +N  +              H    D+       P  L +  
Sbjct: 60  FTTSEAKREAAKALGADEVVNSRNADEM--------AAHLKSFDFILNTVAAPHNLDDFT 111

Query: 281 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 339
              K   G + ++G          V  L    R + G+  GGI    +   +LD C   
Sbjct: 112 TLLKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP---ETQEMLDFCAEH 166

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 8e-13
 Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 8/148 (5%)

Query: 171 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 230
           LS G       A +   V  G  V V G G +G+  +  A+  GAA+++  D +  +  K
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 231 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 290
            K  G    +    E  + I+  V+    G   +   ECTG  + +   +  T+ G   V
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVE-GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLV 125

Query: 291 IVIGVGVDAMVPLNVIALACGGRTLKGT 318
           +V        VPL   A+      +KG 
Sbjct: 126 LVGLGSEMTTVPLLHAAI--REVDIKGV 151

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 62.3 bits (150), Expect = 3e-12
 Identities = 35/201 (17%), Positives = 56/201 (27%), Gaps = 32/201 (15%)

Query: 10  KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTD-ILCSEGFPAPLYPRVLGHE 68
           K     G+ + L   E +     S +  V+ L  S C +D     EG        +LGHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 69  GVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 128
            VG V   G EVK+ K GD VI              +                       
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLA------------ 108

Query: 129 MSVRGQKLYHIFSCSTWSEYMVIDA--NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 186
                   +  F    + EY  ++     +  +   +D S           G+       
Sbjct: 109 -----GWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHI---- 156

Query: 187 KVEKGSSVAVLGLGTVGLGAV 207
                 ++ ++      L   
Sbjct: 157 ----EEALLLMKDKPKDLIKA 173

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 56.2 bits (134), Expect = 4e-10
 Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 12/172 (6%)

Query: 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 222
           ++ ++ + + C   T Y    K+     G  VA+ G+G +G  AV  AR  G   +  ID
Sbjct: 1   VEFAEIAPILCAGVTVYK-GLKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAID 58

Query: 223 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 282
            +  K E  +  G +  +N   E                G           S   +A+  
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPV-----EAIQRDIGGAHGVLVTAVSNSAFGQAIGM 113

Query: 283 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 334
            + G    +V     D   P+  + L   G  + G+  G      DL   LD
Sbjct: 114 ARRGGTIALVGLPPGDFPTPIFDVVL--KGLHIAGSIVGTRA---DLQEALD 160

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 50.1 bits (118), Expect = 4e-08
 Identities = 40/180 (22%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 222
           +   +A+ + C   T Y  A K    + G  VA+ G+G +G  AV  A+  G   ++ +D
Sbjct: 1   LSFEEAAPIFCAGVTTYK-ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 58

Query: 223 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 282
               K E  K  G    +NP  E                GV               A  +
Sbjct: 59  IGDEKLELAKELGADLVVNPLKEDAAKFM-----KEKVGGVHAAVVTAVSKPAFQSAYNS 113

Query: 283 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 342
            + G   V+V     +  +P+    L   G  + G+  G   T+ DL   L      + K
Sbjct: 114 IRRGGACVLVGLPPEEMPIPIFDTVL--NGIKIIGSIVG---TRKDLQEALQFAAEGKVK 168

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 48.6 bits (114), Expect = 2e-07
 Identities = 31/204 (15%), Positives = 56/204 (27%), Gaps = 41/204 (20%)

Query: 7   ITCKAVVCWGLGEP-----LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLY 61
           IT +AV+    GEP      +  EI  +     EV VK L + V  +DI   +G      
Sbjct: 2   ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP 61

Query: 62  PRVLGHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 121
            +  G                            G  +  +  ++  +     + I     
Sbjct: 62  AKTTGFGTT---------------EPAAPCGNEGLFEVIKVGSNVSSLEAGDWVI----- 101

Query: 122 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 181
                              +  TW  + + + +  +K  P+   S A+    G T     
Sbjct: 102 ---------------PSHVNFGTWRTHALGNDDDFIK-LPNPAQSKANGKPNGLTDAKSI 145

Query: 182 AWKEAKVEKGSSVAVLGLGTVGLG 205
                  +    +   G+     G
Sbjct: 146 ETLYDGTKPLHELYQDGVANSKDG 169

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 226
           +A+     + T + +  +  ++  G  V +         A         A+I     +  
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 227 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 286
           K+E     G+    +         ++ +  +T G GVD           +   ++    G
Sbjct: 62  KREMLSRLGVEYVGDSRSV---DFADEILELTDGYGVDVVLNSLA-GEAIQRGVQILAPG 117

Query: 287 KGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI------KTKSDLPTLLDKCKNKE 340
              + +    V A   L + ALA    +               + +  L  +L    + +
Sbjct: 118 GRFIELGKKDVYADASLGLAALA-KSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGK 176

Query: 341 FKLH 344
            ++ 
Sbjct: 177 LEVL 180

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 47.2 bits (111), Expect = 4e-07
 Identities = 25/193 (12%), Positives = 47/193 (24%), Gaps = 45/193 (23%)

Query: 8   TCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVL 65
             +A V           V+ I ++     +V V++ Y+SV + D L S      +     
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
                        +    +EGD VI T                                 
Sbjct: 63  VPGIDLAGVVVSSQHPRFREGDEVIATGYE------------------------------ 92

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
                        +     +SEY  +   ++V +   ++                     
Sbjct: 93  -----------IGVTHFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQAL--KRIL 139

Query: 186 AKVEKGSSVAVLG 198
               +G +V  L 
Sbjct: 140 RGELRGRTVVRLA 152

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 47.0 bits (110), Expect = 6e-07
 Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 10/173 (5%)

Query: 163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 222
           ++  +A+ L+C   T Y A  ++A ++   ++ V+G G              +   I   
Sbjct: 1   LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGV 59

Query: 223 KNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 281
               +  +  K  G    IN   +   +     +                  S  + ++ 
Sbjct: 60  DVREEAVEAAKRAGADYVINASMQDPLA-----EIRRITESKGVDAVIDLNNSEKTLSVY 114

Query: 282 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 334
              + K    V+     A +  +   +        G+  G    +SD   ++ 
Sbjct: 115 PKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVG---NQSDFLGIMR 164

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILC 52
          KA V   LG PL++ ++     +  EV +++    +   D L 
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLM 44

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 19/196 (9%), Positives = 47/196 (23%), Gaps = 46/196 (23%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGH 67
           +A+      +   + V+ I  E      V +K+ Y+ + + D L  +     +    L  
Sbjct: 5   QALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLIL 64

Query: 68  EGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 127
                                      G      +      +  +               
Sbjct: 65  ----------------------GIDAAGTVVSSNDPRFAEGDEVIATSYE---------- 92

Query: 128 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 187
                      +      SEY  +  +++V +  ++   +A             +    +
Sbjct: 93  ---------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVS---LE 140

Query: 188 VEKGSSVAVLGLGTVG 203
              G+   +L     G
Sbjct: 141 ETPGALKDILQNRIQG 156

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 17/191 (8%), Positives = 49/191 (25%), Gaps = 50/191 (26%)

Query: 10  KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVC--HTDILCSEGFPAPLYPRVL 65
           +A++           V+ +        +V V + ++S+       +  +G     +P + 
Sbjct: 2   QALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIP 61

Query: 66  GHEGVGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 125
           G +  G V ++ D      +  ++                                    
Sbjct: 62  GIDFAGTVRTSEDPRFHAGQEVLLTGWG-------------------------------- 89

Query: 126 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 185
                               +E   +  +++V +       + S         +  A   
Sbjct: 90  -----------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEA---PNFAEAIIN 135

Query: 186 AKVEKGSSVAV 196
            +++  + V V
Sbjct: 136 NQIQGRTLVKV 146

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 22/179 (12%), Positives = 38/179 (21%), Gaps = 46/179 (25%)

Query: 19  EPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGD 78
           E L+  E     P   E++V+     +   D     G   P             + S   
Sbjct: 13  EVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSK-- 70

Query: 79  EVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH 138
                     V                                               Y 
Sbjct: 71  ----------VGSGVKHIKAGDRVV---------------------------------YA 87

Query: 139 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA-AWKEAKVEKGSSVAV 196
             +   +S    I A+    +  +I    A            A    E++  +GSS+ +
Sbjct: 88  QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	375
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	100.0
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.93
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.92
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.86
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.86
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.62
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.58
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.5
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.19
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.13
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.79
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.7
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.62
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.61
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.56
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.54
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.41
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.4
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.36
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.31
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.29
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.25
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.22
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.21
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.21
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.2
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.19
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.18
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.17
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.15
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.14
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.13
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.13
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.11
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.09
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.08
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.05
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.05
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.04
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.03
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.03
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.01
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.94
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.93
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.92
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.9
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.88
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.84
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.82
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.8
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.77
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.76
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.75
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.74
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.71
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.7
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.7
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.69
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.69
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.69
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.68
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.67
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.67
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.66
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.65
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.63
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.62
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.62
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.58
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.58
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.56
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.55
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.55
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.52
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.51
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.5
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.5
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.47
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.46
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.42
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.41
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.4
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.39
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.39
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.39
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.38
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.36
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.35
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.35
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.34
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.34
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.31
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.3
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.29
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.23
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.21
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.2
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.18
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.17
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.16
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.16
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.07
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.01
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.98
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.97
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.96
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.91
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.91
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.86
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.84
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.78
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.69
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.68
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.55
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.55
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.5
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.49
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.45
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.4
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.4
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.34
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.27
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.27
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.22
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.22
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.06
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.05
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.03
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.02
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.96
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.95
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.95
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.9
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.89
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.87
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.79
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.78
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.78
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.71
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.71
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.67
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.62
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.61
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.6
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.6
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.58
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.57
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.56
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.55
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.49
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.45
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.38
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.37
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.37
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.36
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.35
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.29
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.28
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.28
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.27
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.08
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.03
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.02
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.01
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.0
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.95
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.93
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.92
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.89
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	93.82
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	93.81
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.81
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.68
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	93.66
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.64
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.6
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.54
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.52
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.42
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.36
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.28
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.27
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	93.2
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.1
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.04
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	92.99
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.85
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.84
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	92.84
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.83
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	92.77
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.74
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.74
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	92.74
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.69
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	92.62
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.57
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	92.55
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.55
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	92.53
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.53
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.51
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.42
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.39
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.31
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.3
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	92.28
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.17
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.16
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.12
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.04
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	92.03
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.03
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.99
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	91.98
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.96
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.83
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	91.8
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.78
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.75
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	91.7
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.56
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	91.54
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.54
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.48
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.37
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	91.32
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	91.32
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.27
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.24
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	91.24
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.23
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.02
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.96
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	90.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	90.93
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	90.91
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.81
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.66
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.51
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.51
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	90.5
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	90.47
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	90.32
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	90.31
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	90.3
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.29
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	90.25
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.17
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	90.1
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	89.98
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	89.95
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.94
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	89.88
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	89.85
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	89.72
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	89.69
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	89.66
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.47
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	89.44
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.41
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.41
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.36
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.26
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	89.24
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.23
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	89.21
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	89.17
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	89.08
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	89.08
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.02
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.01
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	88.95
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.85
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	88.69
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.68
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	88.48
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	88.37
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.37
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	88.16
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.05
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.98
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.9
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	87.8
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.75
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	87.73
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	87.52
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.39
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	87.36
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	87.33
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.31
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.24
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	87.22
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.19
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	87.16
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.15
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.09
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	87.05
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.99
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	86.66
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	86.51
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	86.14
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	86.14
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.09
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	85.95
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.92
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	85.83
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	85.79
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	85.68
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	85.68
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	85.36
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	85.22
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	85.21
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	85.18
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	85.16
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.13
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.09
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	84.87
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.81
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	84.76
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	84.68
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	84.29
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	84.28
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	84.19
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	84.15
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	84.08
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	83.97
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.91
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.36
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	83.26
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.21
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	83.15
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.1
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	83.04
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.03
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	82.86
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	82.64
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.53
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	82.38
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	82.22
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.82
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	81.75
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	81.63
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	81.43
d1ydhb_	181	Hypothetical protein At5g11950 {Thale cress (Arabi	81.4
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	81.22
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	81.07
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	80.65
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	80.38
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	80.25
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	80.1

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=9.5e-40  Score=280.44  Aligned_cols=195  Identities=35%  Similarity=0.576  Sum_probs=179.3

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 017201            3 NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         3 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      ..+++++||+++++++++++++++++|+|+++||+|||.++|||++|++ +.+......+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCc
Confidence            4688999999999999999999999999999999999999999999999 888877778999999999999999999999


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      ++++||||++.+..+|+.|++|+++++++|...+... .+....+...+..+|.+..++++.|+||||++++++.++++|
T Consensus        83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             eecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            9999999999999999999999999999999866543 344456666677888888888889999999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      ++++++++|++.+++.|++.++....+.+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999998877888999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=4.3e-38  Score=269.19  Aligned_cols=194  Identities=40%  Similarity=0.680  Sum_probs=173.8

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      ++.++|||+++++++++|+++++|+|+|+++||||||.++|||++|++ +.|.++...+|.++|||++|+|+++|++|+.
T Consensus         2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~   81 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (197)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCcee
Confidence            367899999999999999999999999999999999999999999999 9998777889999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +++||+|++.+..+|+.|++|+.+.++.|.+..... .+...+........|....++++.|+|+||+++++.+++++|+
T Consensus        82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~  161 (197)
T d2fzwa1          82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (197)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             cCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCC
Confidence            999999999999999999999999999999865543 3455555555667777788888889999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      +++++++|++++++.|++.++.....-+.+++|||+
T Consensus       162 ~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         162 LIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999999886554455788899885

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=5.4e-37  Score=264.17  Aligned_cols=192  Identities=38%  Similarity=0.634  Sum_probs=167.1

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCC
Q 017201            3 NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         3 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      ..++++|||+++++++++++++++|+|+|+++||||||.++|||++|++ +.|.++ ..+|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCce
Confidence            3578999999999999999999999999999999999999999999999 888765 56799999999999999999999


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCcccccccccccc-----cccCCCcccccccCcceecccccCceeeeEEeecccE
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-----GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYV  156 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~-----g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  156 (375)
                      ++++||||++.+...|+.|++|+.|+++.|.+.+...+     +...++...++..|....+.++.|+|+||+++++..+
T Consensus        82 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l  161 (202)
T d1e3ia1          82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (202)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             eccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhE
Confidence            99999999999999999999999999999998776421     1223334445667777788888899999999999999


Q ss_pred             EEcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEEC
Q 017201          157 VKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  198 (375)
Q Consensus       157 ~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G  198 (375)
                      +++|++++++.++++.+++.+++.++.   .+++|++|.|+.
T Consensus       162 ~~lP~~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~  200 (202)
T d1e3ia1         162 ARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL  200 (202)
T ss_dssp             EECCTTSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence            999999999988888888888777642   357899998863

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.4e-36  Score=258.93  Aligned_cols=189  Identities=26%  Similarity=0.464  Sum_probs=157.4

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            6 AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      +++|+|+++.+.+++|+++++|+|+|++|||+||+.+++||++|++ +.|.++ .++|+++|||++|+|+++|++|++++
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEc
Confidence            3589999999999999999999999999999999999999999999 888765 46899999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccc-cccccCCCccccccc--CcceecccccCceeeeEEeecccEEEcCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVR--GQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~--~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +||||+. +..+|+.|++|++|+++.|++.... ..|...+|+.....+  +....+..+.|+|+||.++++.+++++|+
T Consensus        80 vGDrVv~-~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~  158 (194)
T d1f8fa1          80 VGDHVVL-SYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK  158 (194)
T ss_dssp             TTCEEEE-CCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred             cCceeee-ecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCC
Confidence            9999955 4558999999999999999985332 245556665544322  33344556668999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI  221 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~  221 (375)
                      +++++++                         ++|.|+|++|++|+|+|+.+|+++|+++
T Consensus       159 ~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         159 DFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             TCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            9876543                         3456779999999999999999677765

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=1.6e-36  Score=255.98  Aligned_cols=169  Identities=24%  Similarity=0.379  Sum_probs=149.4

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCCC
Q 017201           10 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEVKE   85 (375)
Q Consensus        10 ~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~~~   85 (375)
                      -|++++++++ |+++++|+|+|+++||+||+.+++||++|++ +.+...   ..++|+++|||++|+|+++|++++++++
T Consensus         3 maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~   81 (178)
T d1e3ja1           3 LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK   81 (178)
T ss_dssp             EEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence            3455667774 9999999999999999999999999999998 765432   2467899999999999999999999999


Q ss_pred             CCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           86 GDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        86 Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      ||||++.+..+|+.|++|+.|+++.|++.... .+...+|                  +|+||+.+++++++++|+++++
T Consensus        82 GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~-~~~~~~G------------------~~aey~~v~~~~~~~iP~~~~~  142 (178)
T d1e3ja1          82 GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC-ATPPDDG------------------NLARYYVHAADFCHKLPDNCNV  142 (178)
T ss_dssp             TCEEEECCEECCSSSHHHHTTCGGGCTTCEET-TBTTBCC------------------SCBSEEEEEGGGEEECCTTCCC
T ss_pred             CCEEEECcccccCCccccccCCccccccccce-ecccccc------------------ccceeeeecccceeeCCCCCCH
Confidence            99999999999999999999999999987664 1222343                  9999999999999999999999


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL  199 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  199 (375)
                      ++||++++++.|||+++ +.+++++|++|||+|+
T Consensus       143 ~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         143 KQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             GGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             HHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence            99999999999999985 6889999999999975

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=6.4e-37  Score=262.02  Aligned_cols=191  Identities=39%  Similarity=0.671  Sum_probs=163.3

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .+.+||||+++++++++|+++++|+|+|+++||+|||.++|||++|++ +.|.++ ..+|.++|||++|+|+++|+++.+
T Consensus         4 ~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v~~   82 (198)
T d1p0fa1           4 GKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTC   82 (198)
T ss_dssp             TSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCccccc
Confidence            467899999999999999999999999999999999999999999999 888765 468999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +++||||++.+..+|+.|++|+++++++|+...... .|...++...++..|.+.+.+.+.|+|+||+++++..++++|+
T Consensus        83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~  162 (198)
T d1p0fa1          83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  162 (198)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             CcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence            999999999999999999999999999999866542 3444555555677787788888889999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHH
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  205 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~  205 (375)
                      +++.+.++...+.          ...+.++++|||.|+|++|++
T Consensus       163 ~~~~~~~~~~~~~----------~~~v~~~~~vlv~G~G~iGl~  196 (198)
T d1p0fa1         163 KINVNFLVSTKLT----------LDQINKAFELLSSGQGVRSIM  196 (198)
T ss_dssp             TSCGGGGEEEEEC----------GGGHHHHHHHTTTSSCSEEEE
T ss_pred             CCCHHHHHHhhcc----------hhhcCCCCEEEEECCCcceEE
Confidence            9987765544332          233445667888899988753

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.2e-35  Score=250.00  Aligned_cols=171  Identities=31%  Similarity=0.494  Sum_probs=154.3

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 017201            5 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         5 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .|.||||+++++++++++++++|+|.|++|||+|||.+++||++|++ +.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~   81 (175)
T d1llua1           2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTR   81 (175)
T ss_dssp             CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccc
Confidence            57799999999999999999999999999999999999999999999 9888754 578999999999999999999999


Q ss_pred             CCCCCEEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +++||||++.+ ...|+.|++|+.|.++.|......  |+..+|                  +|+||+++++++++++|+
T Consensus        82 ~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~--G~~~~g------------------g~aey~~v~~~~~~~iPd  141 (175)
T d1llua1          82 VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT--GYSVNG------------------GYAEYVLADPNYVGILPK  141 (175)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB--TTTBCC------------------SSBSEEEECTTTSEECCT
T ss_pred             cccCCEEEeccccccCCccccccCCccccccccccc--cccccc------------------ccceEEEechHHEEECCC
Confidence            99999999765 467999999999999999988774  777776                  999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      +++++.++++.+++.|+++.+ + ++..+|++|||+
T Consensus       142 ~l~~~~a~~~~~~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         142 NVKATIHPGKLDDINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             TCCCCEEEECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             CCChhHHHHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence            999998888888888888865 3 445579999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=1.1e-35  Score=248.73  Aligned_cols=165  Identities=24%  Similarity=0.372  Sum_probs=151.7

Q ss_pred             eEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCCC
Q 017201           10 KAVVCWGLGEPLKVEEIQVEPP-KSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus        10 ~a~~~~~~~~~l~~~~~~~p~~-~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      ||+++++++++|+++++++|++ +++||+||+.+++||++|++ +.|.++   .+.+|.++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7999999999999999999986 68999999999999999999 888764   357899999999999999999999999


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||||++.+..+|+.|+.|++|.+++|.+....  |+..+|                  +|+||++++++.++++|++++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~--g~~~~G------------------~~aey~~v~~~~~~~iP~~~~  140 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFP--GLNIDG------------------GFAEFMRTSHRSVIKLPKDVR  140 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB--TTTBCC------------------SSBSEEEECGGGEEECCTTCC
T ss_pred             CCCEEEEcCccCCCCcccccccccccccccccc--eeeccc------------------ccceeeeehhhcceecCCCCC
Confidence            999999999999999999999999999987764  666666                  999999999999999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEE
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV  196 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI  196 (375)
                      ++.++++.++++|||+++ +.+++ .|++|||
T Consensus       141 ~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         141 VEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            998998888999999987 56777 8999998

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=8.4e-35  Score=249.46  Aligned_cols=190  Identities=34%  Similarity=0.617  Sum_probs=162.5

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCC
Q 017201            4 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         4 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .+.++|||+++++++++|+++++++|+|+++||+|||.++|||++|++ +.|.++ ..+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~v~~   82 (198)
T d2jhfa1           4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVTT   82 (198)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCccccC
Confidence            578899999999999999999999999999999999999999999999 988766 468999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCccccccccccc-ccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      +++||||++.+..+|+.|.+|+.+++..|....... .+...++...+..+|...+.+++.|+|+||+++++.+++++|+
T Consensus        83 ~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~  162 (198)
T d2jhfa1          83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDA  162 (198)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCT
T ss_pred             cCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCC
Confidence            999999999999999999999999999999876543 3444555555667777788888889999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      +++++.++...+++.+...   ....+++|++|+|+
T Consensus       163 ~~~~e~l~~~~~~~~~v~~---g~~~l~~G~~VaVi  195 (198)
T d2jhfa1         163 AFALDPLITHVLPFEKINE---GFDLLRSGESIRTI  195 (198)
T ss_dssp             TSCCGGGEEEEEEGGGHHH---HHHHHHTTCCSEEE
T ss_pred             CCCHHHHHHHHHHHHhhhh---CCceeeCCCEEEEE
Confidence            9988766654444333221   22347899999886

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-34  Score=244.79  Aligned_cols=178  Identities=19%  Similarity=0.275  Sum_probs=149.8

Q ss_pred             cceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCC-C
Q 017201            6 AITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEV-K   81 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v-~   81 (375)
                      |.+|||+++..++..  +++++++.++++++||+||+.++|||++|++ +.|.++...+|+++|||++|+|+++|+++ +
T Consensus         4 P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~~   83 (192)
T d1piwa1           4 PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNS   83 (192)
T ss_dssp             TTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             CceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccccc
Confidence            559999999887754  6777777677899999999999999999999 99888878899999999999999999988 5


Q ss_pred             CCCCCCEEEeecc-CCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcC
Q 017201           82 EVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD  160 (375)
Q Consensus        82 ~~~~Gd~V~~~~~-~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp  160 (375)
                      .+++||||++.+. ..|+.|++|+.++++.|++......+...+|             ....|+|+||+++++++++++|
T Consensus        84 ~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G-------------~~~~Ggfaey~~v~~~~~~~iP  150 (192)
T d1piwa1          84 GLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDG-------------YVSQGGYANYVRVHEHFVVPIP  150 (192)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTS-------------CBCCCSSBSEEEEEGGGEEECC
T ss_pred             ccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccc-------------cccccceeeEEEeehHHeEECC
Confidence            6999999987664 5799999999999999998765432222222             2223599999999999999999


Q ss_pred             CCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          161 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       161 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      ++++++.|+.+.+.+.|||+++ +.+++++|++|||.
T Consensus       151 ~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         151 ENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             TTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            9999988877665678999976 67999999999985

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.7e-34  Score=243.15  Aligned_cols=173  Identities=23%  Similarity=0.337  Sum_probs=145.5

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCC---
Q 017201            6 AITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVK---   81 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~---   81 (375)
                      ++.|||+++++++++|+++++++|+|+++||+|||.++|||++|++ +.|.++...+|+++|||++|+|+++|++|+   
T Consensus         2 ~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           2 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             CceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence            4589999999999999999999999999999999999999999999 999887778999999999999999999886   


Q ss_pred             --CCCCCCEEEeeccCCCCCCchhhccCc-ccccccccccccccCCCcccccccCcceecccccCceeeeEEee-cccEE
Q 017201           82 --EVKEGDIVIPTYIGECKECENCTSEMT-NLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVV  157 (375)
Q Consensus        82 --~~~~Gd~V~~~~~~~~~~c~~~~~~~~-~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~  157 (375)
                        .+++||+|++.+..+|+.|++|+.|.+ +.|++...+  |+......        .  ..-.|+|+||++++ +.+++
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~--G~~~~~~~--------~--~~~~Gg~ae~~~v~~~~~v~  149 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY--GINRGCSE--------Y--PHLRGCYSSHIVLDPETDVL  149 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET--TTTCCSSS--------T--TCCCSSSBSEEEECTTCCEE
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceee--ccCCCCCC--------C--CCcceeCcCcEEechhHcEE
Confidence              468999999999999999999999974 578887664  54321100        0  01135999999996 57999


Q ss_pred             EcCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          158 KVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       158 ~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      ++|++++.++      ++++|++++ +.+++++|++|||+
T Consensus       150 ~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         150 KVSEKITHRL------PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             EECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             ECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence            9999998753      345677765 67899999999997

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-34  Score=244.93  Aligned_cols=169  Identities=23%  Similarity=0.310  Sum_probs=147.3

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC---CCCCCcccCcceeEEEEEeCCCCCCC
Q 017201            8 TCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP---APLYPRVLGHEGVGVVESAGDEVKEV   83 (375)
Q Consensus         8 ~~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~---~~~~p~i~G~e~~G~Vv~vG~~v~~~   83 (375)
                      .++|+|++++++ |+++++|+|+|+++||+|||.+++||++|++ +.+...   ..++|.++|||++|+|+++|++++++
T Consensus         7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            678999999985 9999999999999999999999999999999 775432   35678999999999999999999999


Q ss_pred             CCCCEEEeeccCCCCCCchhhccCccccccccccccccc-CCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           84 KEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        84 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      ++||||++.+..+|+.|++|+.|.++.|....+.  |.. .+|                  +|+||++++++++++||++
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~--g~~~~~G------------------~~aey~~~~~~~~~~lP~~  145 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC--ATPPDDG------------------NLCRFYKHNAAFCYKLPDN  145 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET--TBTTBCC------------------SCBSEEEEEGGGEEECCTT
T ss_pred             cccccceecceeccccchhhccchhchhccceee--ecccccc------------------cceEEEEEchHHEEECCCC
Confidence            9999999999999999999999999999987764  332 333                  8999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCH
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT  201 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~  201 (375)
                      +++++|++++  +++|+++ ++.+++++|++||| |+|+
T Consensus       146 ~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         146 VKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             CGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             CCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence            9999987654  4566665 45778999999998 5554

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=3.9e-35  Score=245.91  Aligned_cols=169  Identities=21%  Similarity=0.208  Sum_probs=141.8

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||+++.++++ ++++++|.|+|+++||+||++++|||++|++ +.++.....+|+++|||++|+|+++|++++++++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999986 9999999999999999999999999999998 877666678899999999999999999999999999


Q ss_pred             EEEeeccCCCCCCchhhccCcccccccccc-cccccCCCcccccccCcceecccccCceeeeEEeec--ccEEEcCCCCC
Q 017201           88 IVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA--NYVVKVDPSID  164 (375)
Q Consensus        88 ~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~~lp~~~~  164 (375)
                      ||++.+..+|+.|++|++++++.|+..... .+|...+|                  +|+||++++.  .+++++|++++
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G------------------~~aEy~~vp~a~~~l~~iP~~~~  141 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG------------------VFGEYFHVNDADMNLAILPKDVD  141 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCC------------------SSBSSEEESSHHHHCEECCTTSC
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCCCCh------------------hcCeeEEEEhhhCeEEECCCCcc
Confidence            999999999999999999999999886532 12333444                  9999999986  47999999999


Q ss_pred             cccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHH
Q 017201          165 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAV  207 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai  207 (375)
                      +++++.....   ++..+        ++.+||+|+|++|++++
T Consensus       142 ~~~~~~~~~~---~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         142 LSKLVTHVYH---GFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             GGGGEEEEEE---SGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             hHHHHHHHHH---HHHHh--------cCceEEECCCHHHhhee
Confidence            8877654322   22222        34477888888887543

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=4.1e-33  Score=234.81  Aligned_cols=165  Identities=27%  Similarity=0.417  Sum_probs=142.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCC--------CCCCCcccCcceeEEEEEeCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFP--------APLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~--------~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      |||+++.++|++|+++++++|+|+++||+||+.++|||++|++ +.|.++        ...+|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            8999999999999999999999999999999999999999999 887642        2468999999999999999999


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeeccc-EEE
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANY-VVK  158 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-~~~  158 (375)
                      ++++++||||++.+..+|+.|+.|++++++.|+.....  |+..+|                  +|+||+++++.. +++
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~--g~~~~G------------------~~aey~~vp~~~~~~~  140 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--GINFDG------------------AYAEYVIVPHYKYMYK  140 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB--TTTBCC------------------SSBSEEEESCGGGEEE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCccee--eecccc------------------ccccEEEEEhHHeEEE
Confidence            99999999999999999999999999999999988764  777666                  999999997655 555


Q ss_pred             cCCCCCccccccc-ccchhhhhhhhhhhcCCCCCCEEEE
Q 017201          159 VDPSIDPSDASFL-SCGFTTGYGAAWKEAKVEKGSSVAV  196 (375)
Q Consensus       159 lp~~~~~~~aa~l-~~~~~ta~~~l~~~~~~~~g~~VlI  196 (375)
                      +|+ +++.++|++ ..++.+|++++ +.+++ .|++|||
T Consensus       141 ~~~-~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         141 LRR-VKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             CSS-SCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             CCC-CChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            554 555555554 45788888875 55666 5999997

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=1.2e-35  Score=254.19  Aligned_cols=190  Identities=20%  Similarity=0.238  Sum_probs=153.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-------CCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPP-------KSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEV   80 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~-------~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v   80 (375)
                      +||++++++++ ++++++|.|++       +++||+|||.+++||++|++ +.|..+ ..+|+++|||++|+|+++|++|
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence            69999999985 99999999865       46999999999999999999 888765 4689999999999999999999


Q ss_pred             CCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeec--ccEEE
Q 017201           81 KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA--NYVVK  158 (375)
Q Consensus        81 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~~  158 (375)
                      ++|++||||++.+..+|+.|++|++++++.|........+...    .+...      ..-.|+|+||++++.  .++++
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~----g~~~~------~~~~Gg~aeyv~vp~~~~~l~~  149 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAY----GYVDM------GDWTGGQAEYVLVPYADFNLLK  149 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEB----TCTTS------CCBCCCSBSEEEESSHHHHCEE
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCcccccccccccccccc----cccCC------CccccccccEEEeehHHCeEEE
Confidence            9999999999999999999999999999999775422111000    00000      011259999999975  47999


Q ss_pred             cCCCCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Q 017201          159 VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA  215 (375)
Q Consensus       159 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~  215 (375)
                      ||++.++.+++++...+.++++++ ..++.+.++    +|+|++|++++|+||.+|+
T Consensus       150 iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         150 LPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             CSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            999877777777777888888875 445555553    5889999999999999885

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=8.5e-33  Score=231.68  Aligned_cols=167  Identities=31%  Similarity=0.492  Sum_probs=144.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCC-CCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGF-PAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~-~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||+++++++++++++++|.|+|++|||+|||+++|||++|++ +.+.. ....+|.++|||++|+|+++|++++.+++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            8999999999999999999999999999999999999999999 77654 346789999999999999999999999999


Q ss_pred             CEEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCc
Q 017201           87 DIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP  165 (375)
Q Consensus        87 d~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~  165 (375)
                      |||++.+ ...|+.|..|..+.+++|......  |...+|                  +|+||+++++++++++|+++++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~G------------------~~aey~~v~~~~~~~iP~~~~~  140 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA--GYSVDG------------------GYAEYCRAAADYVVKIPDNTII  140 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB--TTTBCC------------------SSBSEEEEEGGGCEECCTTCCE
T ss_pred             eEEeeccccccccccccccCCCcccccccccc--ceeccC------------------ccccceEecHHHEEECCCCCCH
Confidence            9998765 456889999999999999987764  666665                  9999999999999999999988


Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL  199 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  199 (375)
                      +.|+ +. .+.++++++. .+.+ +|++|||+|.
T Consensus       141 e~A~-l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         141 EVQP-LE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             EEEE-GG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             HHHH-HH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            6654 44 3556666553 3455 5999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.1e-32  Score=229.75  Aligned_cols=159  Identities=26%  Similarity=0.474  Sum_probs=131.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEGD   87 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~Gd   87 (375)
                      |||++..+++++|+++++|.|+|++|||+|||.++|||++|++ +.|.++...+|+++|||++|+|+++|++|+++++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            7999999999999999999999999999999999999999999 999887788999999999999999999999999999


Q ss_pred             EEEeec-cCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           88 IVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        88 ~V~~~~-~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      +|.+.+ ..+|+.|++|++|++++|.+......+...+.            .....|+|+||+++++++++++|++....
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~------------~~~~~GgfaEy~~v~~~~~~~ip~~~~~~  148 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDE------------PGHTLGGYSQQIVVHERYVLRIRVADIEM  148 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSST------------TSBCCCSSBSEEEEEGGGCEECCCCCEEE
T ss_pred             EEEEcccccccCccccccCcccccCCCccccccccCCCC------------CcccccccceEEEechHHEEECCCCCcCh
Confidence            998776 46899999999999999998654322221111            01223599999999999999999664332


Q ss_pred             cccccccchhhhhhhh
Q 017201          167 DASFLSCGFTTGYGAA  182 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l  182 (375)
                      ..  . .++.++++++
T Consensus       149 ~~--a-~~l~~a~~a~  161 (179)
T d1uufa1         149 IR--A-DQINEAYERM  161 (179)
T ss_dssp             EC--G-GGHHHHHHHH
T ss_pred             hH--h-chhHHHHHHH
Confidence            22  2 2456677665

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=1.3e-29  Score=212.69  Aligned_cols=173  Identities=31%  Similarity=0.469  Sum_probs=158.0

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      ++++.|++++|++.|||+++.+.++++||++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++|+
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35678999999999999999899999999999999999999999999999999888889999999999999999999998


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeec
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      ++   +++.+.+++++++ ++|+||||+|+++.++.++++++++ |+++.+|.... ...++++..++.+++++.|+.++
T Consensus        81 ~~---~~~~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          81 KT---QDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TT---SCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CC---cCHHHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            87   7899999999988 9999999999998999999999997 99999997653 56788999998899999999877


Q ss_pred             cccCCCCHHHHHHHHHcCC
Q 017201          322 GIKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~  340 (375)
                      ++..+++++++++|+++|+
T Consensus       156 ~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSCHHHHHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHHHHcCC
Confidence            7666677899999999886

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.8e-30  Score=207.57  Aligned_cols=144  Identities=24%  Similarity=0.353  Sum_probs=129.0

Q ss_pred             eeeEEEEecCCCC--eEEE-EeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 017201            8 TCKAVVCWGLGEP--LKVE-EIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         8 ~~~a~~~~~~~~~--l~~~-~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      -|||++++++|.+  ++++ ++|.|+|++|||+|||.+++||++|++ +.|..+. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            4899999988766  7774 689999999999999999999999999 8887654 568999999999999999999999


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      |++||||++.+..                            +                  |+|+||++++++.++++|++
T Consensus        82 ~~vGdrV~~~~~~----------------------------~------------------G~~ae~~~v~~~~~~~iP~~  115 (150)
T d1yb5a1          82 FKKGDRVFTSSTI----------------------------S------------------GGYAEYALAADHTVYKLPEK  115 (150)
T ss_dssp             CCTTCEEEESCCS----------------------------S------------------CSSBSEEEEEGGGEEECCTT
T ss_pred             cccCccccccccc----------------------------c------------------ccccccccccccccccccCC
Confidence            9999999854321                            1                  49999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      +++++||+++++..|+|+++...+..++|+++||+
T Consensus       116 ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         116 LKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             CCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            99999999999999999998888999999999984

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=2.1e-28  Score=204.59  Aligned_cols=173  Identities=39%  Similarity=0.647  Sum_probs=149.5

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++||++.|++.|+|+++.+.+++++|++|||+|+|++|++++|+||.+|+++|++++.+++|+++++++|++.++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            46789999999999999988899999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      .  .++..+.+.+.+.+.|+|++|||+|+++.++++++++++++|+++.+|.+. ...++++..++ .+.++.|+..+++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~-~~~~i~~~~~~-~~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 E--LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV-DEMTIPTVDVI-LGRSINGTFFGGW  157 (174)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS-SEEEEEHHHHH-TTCEEEECSGGGC
T ss_pred             c--chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC-CccccchHHHh-ccCEEEEEEeeCC
Confidence            4  123444455555555999999999999999999999999439999999876 56788877776 4678999988877


Q ss_pred             cCCCCHHHHHHHHHcCC
Q 017201          324 KTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~  340 (375)
                      ...++++++++++++||
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence            66778899999998876

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=7e-28  Score=201.63  Aligned_cols=173  Identities=38%  Similarity=0.655  Sum_probs=146.4

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +|.+||++.|++.|||+++++.+++++|++|||+|+|++|++++|+||++|+++|++++++++|+++++++|++.++|+.
T Consensus         1 ~P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           1 APLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            36789999999999999998889999999999999999999999999999998999999999999999999999999887


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      +  .++..+...+.+.+.++|++||++|+.+.++.++..+++++|+++.+|.... ...++++..++ +++++.|+.+++
T Consensus        81 ~--~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~  157 (174)
T d1p0fa2          81 D--YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL-TGRSLKGSVFGG  157 (174)
T ss_dssp             G--CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH-TTCEEEECSGGG
T ss_pred             C--chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHh-CCCEEEEEEeCC
Confidence            5  1233444444455559999999999998889999988774489999997654 56666666665 788999998877


Q ss_pred             ccCCCCHHHHHHHHHcCC
Q 017201          323 IKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~  340 (375)
                      +. .++++++++++.+||
T Consensus       158 ~~-~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         158 FK-GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CC-GGGHHHHHHHHHTTS
T ss_pred             CC-HHHHHHHHHHHHcCC
Confidence            53 458999999999886

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-28  Score=205.91  Aligned_cols=168  Identities=25%  Similarity=0.284  Sum_probs=149.3

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +|+++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|++.++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5789999999999999999988899999999999997 9999999999999999 8999999999999999999999999


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +++   .++.+.+++.+++.++|+|||++|++ .++.++++++++ |+++.+|...  ..++++..++.|++++.++.+.
T Consensus        80 ~~~---~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          80 HRE---VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSRG--TIEINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TTS---TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCCS--CEEECTHHHHTTTCEEEECCGG
T ss_pred             ccc---ccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCC-CEEEEEecCC--CCCCCHHHHHHCCCEEEEEEec
Confidence            988   88999999999998999999999975 899999999997 9999999654  5677888888899999998754


Q ss_pred             cccCCCCHHHHHHHHHcC
Q 017201          322 GIKTKSDLPTLLDKCKNK  339 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~  339 (375)
                      +. .++++++++++++++
T Consensus       153 ~~-~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         153 SS-TKEEFQQYAAALQAG  169 (174)
T ss_dssp             GC-CHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHHHHHH
Confidence            32 234677777776653

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=8.1e-28  Score=195.67  Aligned_cols=140  Identities=23%  Similarity=0.293  Sum_probs=121.0

Q ss_pred             eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCCCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201           10 KAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus        10 ~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      +.+.|+++|.+  |++++++.|+|++|||+|||.++++|++|++ +.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            46788888876  9999999999999999999999999999999 99988888899999999999999999999999999


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |||+...                                              .+.|+|+||+.++++.++++|++++++
T Consensus        82 drV~~~~----------------------------------------------~~~G~~ae~~~v~~~~~~~~P~~~~~~  115 (147)
T d1qora1          82 DRVVYAQ----------------------------------------------SALGAYSSVHNIIADKAAILPAAIKVD  115 (147)
T ss_dssp             CEEEESC----------------------------------------------CSSCCSBSEEEEEGGGEEECCTTSCCC
T ss_pred             ceeeeec----------------------------------------------cccccceeEEEEehHHeEEcCcccchH
Confidence            9997321                                              112499999999999999999999888


Q ss_pred             cccc--cccchhhhhhhhhhhcCCCCCCEEEE
Q 017201          167 DASF--LSCGFTTGYGAAWKEAKVEKGSSVAV  196 (375)
Q Consensus       167 ~aa~--l~~~~~ta~~~l~~~~~~~~g~~VlI  196 (375)
                      ++++  +++...++++++.+ .++++|++|||
T Consensus       116 ~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         116 VAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             CCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            6554  55666677776654 68999999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=5.2e-28  Score=197.89  Aligned_cols=148  Identities=24%  Similarity=0.225  Sum_probs=124.4

Q ss_pred             cceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCC
Q 017201            6 AITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVK   81 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~   81 (375)
                      |.+|||+++++++++  ++++++++|+|++|||+|||.++|||++|++ +.|..+. +..|.++|+|++|+|++  ..++
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSS
T ss_pred             CCceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCC
Confidence            347999999998876  4578999999999999999999999999999 8887654 56899999999999998  4567


Q ss_pred             CCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCC
Q 017201           82 EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP  161 (375)
Q Consensus        82 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~  161 (375)
                      .+++||+|+.....                       .+...+                  |+|+||++++++.++++|+
T Consensus        79 ~~~~g~~v~~~~~~-----------------------~~~~~~------------------G~~aEy~~v~~~~~~~iP~  117 (152)
T d1xa0a1          79 RFREGDEVIATGYE-----------------------IGVTHF------------------GGYSEYARLHGEWLVPLPK  117 (152)
T ss_dssp             SCCTTCEEEEESTT-----------------------BTTTBC------------------CSSBSEEEECGGGCEECCT
T ss_pred             ccccCCEEEEecCc-----------------------cccccC------------------CCcceeeeehhhccccCCC
Confidence            89999999854321                       122233                  4999999999999999999


Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEEC
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  198 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~G  198 (375)
                      +++ .+||+++++..||+.++...++++ |++|||+|
T Consensus       118 ~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         118 GLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             THH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            998 478889889899988888877875 99999975

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=1.3e-27  Score=199.78  Aligned_cols=169  Identities=23%  Similarity=0.296  Sum_probs=154.2

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +|+.|||+++|++.|||+++ +..++++|++|||+|+ |++|++++|+++..|+.+|++++++++|+++++++|++.+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999986 6689999999999996 999999999999999879999999999999999999999999


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +.+   +++.+.+++.+.+.++|++||++|+++.++.++++++++ |+++.+|.+. .+.+++...+++|++++.|++.+
T Consensus        80 ~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~i~i~Gs~~~  154 (170)
T d1jvba2          80 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFG-ADLHYHAPLITLSEIQFVGSLVG  154 (170)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSC-CCCCCCHHHHHHHTCEEEECCSC
T ss_pred             cCC---cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEecccc-CccccCHHHHHhCCcEEEEEecC
Confidence            887   789999999998889999999999998899999999998 9999999876 57888888888899999998754


Q ss_pred             cccCCCCHHHHHHHHHcCC
Q 017201          322 GIKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~  340 (375)
                         .+++++++++++++||
T Consensus       155 ---~~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         155 ---NQSDFLGIMRLAEAGK  170 (170)
T ss_dssp             ---CHHHHHHHHHHHHTTS
T ss_pred             ---CHHHHHHHHHHHHcCC
Confidence               3467999999999886

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=7.2e-28  Score=191.08  Aligned_cols=129  Identities=20%  Similarity=0.205  Sum_probs=116.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCCCC
Q 017201            9 CKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVKEG   86 (375)
Q Consensus         9 ~~a~~~~~~~~~l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~~G   86 (375)
                      |||++++++|+++++++++.|+|+++||+||++++|||++|++ +.|.++. ..+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            8999999999999999999999999999999999999999999 8887755 578999999999998           39


Q ss_pred             CEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCCcc
Q 017201           87 DIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS  166 (375)
Q Consensus        87 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~  166 (375)
                      |+|+...                             .+                  |+|+||++++++.++++|++++++
T Consensus        70 d~V~~~~-----------------------------~~------------------G~~aey~~v~~~~~~~~P~~~~~~  102 (131)
T d1iz0a1          70 RRYAALV-----------------------------PQ------------------GGLAERVAVPKGALLPLPEGRPVV  102 (131)
T ss_dssp             EEEEEEC-----------------------------SS------------------CCSBSEEEEEGGGCEECCTTCCCE
T ss_pred             ceEEEEe-----------------------------cc------------------CccceeeeeCHHHeEEccCCCCHH
Confidence            9997432                             22                  399999999999999999999999


Q ss_pred             cccccccchhhhhhhhhhhcCCCCCCEEEEE
Q 017201          167 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  197 (375)
Q Consensus       167 ~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~  197 (375)
                      +||++++++.|||+++.+++  +.|++||++
T Consensus       103 ~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         103 GPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             EEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            99999999999999987765  569999873

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=1.5e-27  Score=199.44  Aligned_cols=171  Identities=30%  Similarity=0.442  Sum_probs=146.6

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +|+++|+.++++++|||+++ +.+++++|++|||+|+|++|++++|+||.+|+.+|++++++++|+++++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            46889999999999999985 67999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHH--hhcCCceEEEEe
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIA--LACGGRTLKGTT  319 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~--~~~~~~~~~~~~  319 (375)
                      ++   +++.+.++++++++|+|+|||++|+++.+++++++++++ |+++.+|.+.. ....++...  ...+++++.++.
T Consensus        80 ~~---~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          80 KN---GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GG---SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             cc---hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            87   788999999999999999999999988899999999997 99999997754 344443332  344788998886


Q ss_pred             eccccCCCCHHHHHHHHHcCC
Q 017201          320 FGGIKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~  340 (375)
                      .+..  +..++++++++..|+
T Consensus       156 ~~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCH--HHHHHHHHHHHHTTS
T ss_pred             CCCC--cccHHHHHHHHHcCC
Confidence            5432  234677788888775

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=3.8e-27  Score=197.40  Aligned_cols=172  Identities=39%  Similarity=0.642  Sum_probs=147.9

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +++.||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            47889999999999999988889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      +  .+...+.+.+.+.+.|+|++||++|....++.++..+.+++|+++.+|.+.. ....+++..++ ++.+++|+.+++
T Consensus        83 ~--~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 D--STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLF-TGRTWKGCVFGG  159 (176)
T ss_dssp             G--CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHH-TTCEEEECSGGG
T ss_pred             c--cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHh-CCCEEEEEEEeC
Confidence            6  2334566677777779999999999998888888888665599999998765 55666666666 788999998887


Q ss_pred             ccCCCCHHHHHHHHHc
Q 017201          323 IKTKSDLPTLLDKCKN  338 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~  338 (375)
                      ...+++++++++++.+
T Consensus       160 ~~~~~dip~li~~~~~  175 (176)
T d1d1ta2         160 LKSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CCHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhC
Confidence            7667788888877643

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=1.4e-27  Score=202.02  Aligned_cols=174  Identities=18%  Similarity=0.279  Sum_probs=148.6

Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  244 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~  244 (375)
                      +|||+++++++|||+++++.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5799999999999999999999999999999987 9999999999999999 9999999999999999999999999887


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeeccc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                         +++.+.+++.++++|+|++||++|++ .++.++++++++ |+++.+|.... ....++...+ .+++++.+......
T Consensus        80 ---~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  153 (183)
T d1pqwa_          80 ---VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPG-GRFIELGKKDVYADASLGLAAL-AKSASFSVVDLDLN  153 (183)
T ss_dssp             ---STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGG-TTTCEEEECCHHHH
T ss_pred             ---cCHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHH-hCCcEEEEEEccce
Confidence               79999999999999999999999986 899999999997 99999987654 2333333334 48888888754322


Q ss_pred             ------cCCCCHHHHHHHHHcCCCCCCcc
Q 017201          324 ------KTKSDLPTLLDKCKNKEFKLHQL  346 (375)
Q Consensus       324 ------~~~~~~~~~~~~~~~~~~~~~~~  346 (375)
                            ..++.++++++++++|+++|.|+
T Consensus       154 ~~~~~~~~~~~~~~v~~~i~~G~i~p~Pi  182 (183)
T d1pqwa_         154 LKLQPARYRQLLQHILQHVADGKLEVLPV  182 (183)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred             eccCHHHHHHHHHHHHHHHHCCCCceeCC
Confidence                  11245778889999999997653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=4.1e-27  Score=198.79  Aligned_cols=172  Identities=27%  Similarity=0.329  Sum_probs=146.9

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +++.+|++.|++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++.++++.
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            34567889999999999988888999999999999999999999999999987899999999999999999999999988


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHH-hhcCCceEEEEeec
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIA-LACGGRTLKGTTFG  321 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~  321 (375)
                      +.+..+..+.+.+++++.|+|+|||++|++..++.++++++++ |+++.+|.... .+.++++.. +++|++++.|++..
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            7322345566888888889999999999987899999999998 99999997654 566676654 66799999998754


Q ss_pred             cccCCCCHHHHHHHHHcC
Q 017201          322 GIKTKSDLPTLLDKCKNK  339 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~  339 (375)
                      +   ..++++++++++++
T Consensus       161 ~---~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 D---TSHFVKTVSITSRN  175 (182)
T ss_dssp             C---HHHHHHHHHHHHTC
T ss_pred             C---HHHHHHHHHHHHHC
Confidence            2   35688888888765

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=7.3e-27  Score=196.22  Aligned_cols=174  Identities=41%  Similarity=0.626  Sum_probs=142.8

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++||+++|++.|||+++.+.++++||++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46789999999999999998889999999999999999999999999999988999999999999999999999999886


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC-ccccchHHHhhcCCceEEEEeecc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      + ..++..+.+++.+++ ++|+|||++|+...++.++.+++++ +.++.++.... .....+....+.++.++.|+.+++
T Consensus        82 ~-~~~~~~~~~~~~~~~-g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 D-FSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             G-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             c-hhhHHHHHHHHHcCC-CCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            5 224455555555554 9999999999998889999999997 77776654432 223333333334889999998887


Q ss_pred             ccCCCCHHHHHHHHHcCC
Q 017201          323 IKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~  340 (375)
                      ....++++++++++++||
T Consensus       159 ~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence            766677889999998886

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.94  E-value=8.7e-27  Score=194.89  Aligned_cols=166  Identities=20%  Similarity=0.280  Sum_probs=147.2

Q ss_pred             cccccccccchhhhhhhhhhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          165 PSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.++|++++++.|||+++.+.. .++||++|||+|+|++|++++|+|++.|+.+|++++++++|+++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5689999999999999987655 489999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      +    +..+.+.+.+.+.++|+|||++|+...++.++++++++ |+++.+|...  ..++++..++.|++++.|++.++ 
T Consensus        86 ~----~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~--~~~~~~~~l~~k~~~i~Gs~~~~-  157 (172)
T d1h2ba2          86 R----DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG--ELRFPTIRVISSEVSFEGSLVGN-  157 (172)
T ss_dssp             S----CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS--CCCCCHHHHHHTTCEEEECCSCC-
T ss_pred             c----cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc--cccCCHHHHHhCCcEEEEEEecC-
Confidence            6    45566677888889999999999988899999999998 9999999653  57888888888999999997653 


Q ss_pred             cCCCCHHHHHHHHHcCC
Q 017201          324 KTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~  340 (375)
                        +.+++++++++++|+
T Consensus       158 --~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 --YVELHELVTLALQGK  172 (172)
T ss_dssp             --HHHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHHcCC
Confidence              367899999999886

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-26  Score=191.59  Aligned_cols=169  Identities=21%  Similarity=0.359  Sum_probs=145.7

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +|+++||.+. ++++||+++ +++++++|++|+|+|+|++|++++|+|++.|+++|++++++++|+++++++|++.+++.
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4678888775 788999975 67899999999999999999999999999999889999999999999999999999988


Q ss_pred             CCCCcccHHHHHHh--hcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          243 DDEPNKSISELVKG--ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       243 ~~~~~~~~~~~i~~--~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      .+   ++..+..+.  .+.+.++|+|||++|++..++.++++++++ |+++.+|.+. ...++++..++.|++++.|++ 
T Consensus        79 ~~---~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~-~~~~~~~~~~~~k~l~i~Gs~-  152 (171)
T d1pl8a2          79 SK---ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS-EMTTVPLLHAAIREVDIKGVF-  152 (171)
T ss_dssp             SS---CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC-SCCCCCHHHHHHTTCEEEECC-
T ss_pred             cc---cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCC-CCCccCHHHHHHCCcEEEEEe-
Confidence            76   444433332  234558999999999998899999999998 9999999877 567899999989999999975 


Q ss_pred             ccccCCCCHHHHHHHHHcCCCC
Q 017201          321 GGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                         .+.++++++++++++|+++
T Consensus       153 ---~~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         153 ---RYCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             ---SCSSCHHHHHHHHHTTSCC
T ss_pred             ---CCHhHHHHHHHHHHcCCCC
Confidence               2356899999999999975

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=2.1e-26  Score=193.33  Aligned_cols=175  Identities=38%  Similarity=0.575  Sum_probs=143.5

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++||+++|++.|||+++.+.++++|||+|||+|+|++|++++++++..|+.+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            46789999999999999998999999999999999999999999999999988999999999999999999999999876


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      +  .++......+.+.+.|+|++||++|.+..++.++.++++++|.++..+.............++.+++++.|+.++++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2jhfa2          82 D--YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGF  159 (176)
T ss_dssp             G--CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             C--chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCC
Confidence            5  13444445555555599999999999988899999999963555555544433323333334459999999988877


Q ss_pred             cCCCCHHHHHHHHHcCC
Q 017201          324 KTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~  340 (375)
                      ..+++++++++++.+||
T Consensus       160 ~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         160 KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHCcC
Confidence            66778999999998875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=2.1e-26  Score=191.44  Aligned_cols=165  Identities=22%  Similarity=0.326  Sum_probs=146.3

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +|+++||+++|++.|||+++ +++++++|++|||+|+|++|++++|+||..|+ +|++++++++|+++++++|++.++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            47899999999999999987 56899999999999999999999999999998 99999999999999999999999998


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      .+   +++.+.+++.+.  +.|.+++++++.+.++.++++++++ |+++.+|.+. ...+++...++.|++++.|+..++
T Consensus        79 ~~---~~~~~~~~~~~~--g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~Gs~~~~  151 (166)
T d1llua2          79 RQ---EDPVEAIQRDIG--GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPP-GDFPTPIFDVVLKGLHIAGSIVGT  151 (166)
T ss_dssp             TT---SCHHHHHHHHHS--SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCS-SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---hhHHHHHHHhhc--CCcccccccccchHHHHHHHHhcCC-cEEEEEEecC-CCccCCHHHHHhCCcEEEEEeecC
Confidence            87   778888877665  4677777787777999999999997 9999999876 467889999999999999987543


Q ss_pred             ccCCCCHHHHHHHHHcC
Q 017201          323 IKTKSDLPTLLDKCKNK  339 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~  339 (375)
                         +++++++++++.+|
T Consensus       152 ---~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 ---RADLQEALDFAGEG  165 (166)
T ss_dssp             ---HHHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHHCc
Confidence               46789999999887

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=5.3e-27  Score=195.55  Aligned_cols=171  Identities=18%  Similarity=0.138  Sum_probs=138.0

Q ss_pred             CCcccccccccchhhhhhhh---hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          163 IDPSDASFLSCGFTTGYGAA---WKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l---~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      +|++|||++++++.|||+++   .+.++.++|++|||+|+ |++|.+++|+||..|+ +|++++++++|.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            57899999999999999664   45678999999999987 9999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (375)
                      ++|+++    .+.+.+ +.++++++|+|||++|+. .+..++++|+++ |+++.+|...+...+++...++.|++++.|.
T Consensus        80 vi~~~~----~~~~~~-~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~-Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED----VMAERI-RPLDKQRWAAAVDPVGGR-TLATVLSRMRYG-GAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC--------------CCSCCEEEEEECSTTT-THHHHHHTEEEE-EEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch----hHHHHH-HHhhccCcCEEEEcCCch-hHHHHHHHhCCC-ceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            999865    333333 455566999999999988 899999999997 9999999987778889999999999999996


Q ss_pred             eeccccCCCCHHHHHHHHHcCCCCC
Q 017201          319 TFGGIKTKSDLPTLLDKCKNKEFKL  343 (375)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~  343 (375)
                      .... ...+....+++.+ .++++|
T Consensus       153 ~~~~-~~~~~~~~~~~~l-ag~lkP  175 (176)
T d1xa0a2         153 DSVY-CPMDLRLRIWERL-AGDLKP  175 (176)
T ss_dssp             CSSS-CCHHHHHHHHHHH-HTTTCC
T ss_pred             eCCc-CCHHHHHHHHHHH-hcccCC
Confidence            4221 1123344445544 477775

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=3e-26  Score=192.19  Aligned_cols=174  Identities=40%  Similarity=0.614  Sum_probs=146.5

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      ++++||+++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..|+.+|++++++++|+++++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            46789999999999999998899999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeeccc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  323 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (375)
                      +  +.+..+.+.+.+.+.|+|++||++|+...+..++.+++++++.++..+... ....++...++.+++++.|+..+++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 D--HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-LHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-SSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             C--cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-CcccCccHHHHHCCcEEEEEEEeCC
Confidence            6  234556666666666999999999998888999999888635555555554 3444455555558899999988877


Q ss_pred             cCCCCHHHHHHHHHcCC
Q 017201          324 KTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       324 ~~~~~~~~~~~~~~~~~  340 (375)
                      ..+++++++++++.+||
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            66778999999998875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=5.9e-26  Score=189.11  Aligned_cols=168  Identities=23%  Similarity=0.358  Sum_probs=149.7

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +|+++||++++++.|||+++ +.++++||++|||+|+|++|++++++|+..|+ +|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            57899999999999999986 46899999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeecc
Q 017201          243 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  322 (375)
Q Consensus       243 ~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (375)
                      .+   .++.+.+++.+.+  .|.++++.++.+.++.++++++++ |+++.+|.+. .+.+++...++.+++++.|+... 
T Consensus        79 ~~---~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~-~~~~~~~~~~~~~~~~i~gs~~~-  150 (168)
T d1rjwa2          79 LK---EDAAKFMKEKVGG--VHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPP-EEMPIPIFDTVLNGIKIIGSIVG-  150 (168)
T ss_dssp             TT---SCHHHHHHHHHSS--EEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCS-SEEEEEHHHHHHTTCEEEECCSC-
T ss_pred             cc---chhhhhcccccCC--CceEEeecCCHHHHHHHHHHhccC-CceEeccccc-CCCCCCHHHHHHCCcEEEEEeeC-
Confidence            88   7888889888865  555556677777899999999997 9999999876 57788888988899999998644 


Q ss_pred             ccCCCCHHHHHHHHHcCCCC
Q 017201          323 IKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~  342 (375)
                        ++++++++++++++|+++
T Consensus       151 --~~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         151 --TRKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --CHHHHHHHHHHHHTTSCC
T ss_pred             --CHHHHHHHHHHHHhCCCC
Confidence              346799999999999975

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.93  E-value=3.3e-25  Score=184.92  Aligned_cols=168  Identities=23%  Similarity=0.401  Sum_probs=140.0

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  242 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~  242 (375)
                      +|+++||++. ++++||+++ +++++++|++|||+|+|++|++++|+||..|+ +|++++++++|+++++++|++..++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4678888775 788999986 67899999999999999999999999999999 99999999999999999999876543


Q ss_pred             CCC--CcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEee
Q 017201          243 DDE--PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  320 (375)
Q Consensus       243 ~~~--~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (375)
                      +..  +..+..+.+.+.. +.++|+|||++|++..++.++++++++ |+++.+|.+. .+.++++..++.|++++.|++ 
T Consensus        78 ~~~~~~~~~~~~~~~~~~-g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~-~~~~~~~~~~~~k~i~i~gs~-  153 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAI-GDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS-QMVTVPLVNACAREIDIKSVF-  153 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHS-SSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS-SCCCCCHHHHHTTTCEEEECC-
T ss_pred             cccccccchhhhhhhccc-ccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCC-CCCCcCHHHHHHCCCEEEEEE-
Confidence            321  1122334444444 448999999999998899999999998 9999999876 467889889999999999874 


Q ss_pred             ccccCCCCHHHHHHHHHcCC
Q 017201          321 GGIKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~  340 (375)
                         .+.++++++++++++|+
T Consensus       154 ---~~~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         154 ---RYCNDYPIALEMVASGR  170 (170)
T ss_dssp             ---SCSSCHHHHHHHHHTTS
T ss_pred             ---CCHHHHHHHHHHHHcCC
Confidence               23468999999999886

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=6.9e-26  Score=188.62  Aligned_cols=166  Identities=21%  Similarity=0.358  Sum_probs=137.7

Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      ..+++.+|+++|+..|+|+++ +.+++++|++|||+|+|++|++++|+||.+|+ ++++++++++|+++++++|++.+++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence            446778888999999999987 57899999999999999999999999999999 7888999999999999999999999


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +.+   .+..     ....+++|++||++|++..++.++.+++++ |+++.+|...+....++...+++|++++.|+..+
T Consensus        81 ~~~---~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~  151 (168)
T d1uufa2          81 SRN---ADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIG  151 (168)
T ss_dssp             TTC---HHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC-------CHHHHHTTTCEEEECCSC
T ss_pred             Cch---hhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCCcccccHHHHHHCCcEEEEEeec
Confidence            876   3322     223458999999999887899999999998 9999999876555677888888899999998755


Q ss_pred             cccCCCCHHHHHHHHHcCCC
Q 017201          322 GIKTKSDLPTLLDKCKNKEF  341 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~  341 (375)
                      +   ..+++++++++.+++|
T Consensus       152 ~---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         152 G---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHHTC
T ss_pred             C---HHHHHHHHHHHHHcCC
Confidence            3   4678889999887664

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=6.5e-26  Score=190.88  Aligned_cols=143  Identities=23%  Similarity=0.213  Sum_probs=129.4

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +|+++||+++++++|||+++.+.++++||++|||+|+ |++|++++|+|+..|+ +|++++++++|.++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5789999999999999999988889999999999977 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcC
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG  311 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~  311 (375)
                      +++   +++.+.+++++++.++|+|+|+++++ .++.++.+++++ |+++.++........++...+..+
T Consensus        80 ~~~---~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  144 (179)
T d1qora2          80 YRE---EDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRR-GLMVSFGNSSGAVTGVNLGILNQK  144 (179)
T ss_dssp             TTT---SCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEE-EEEEECCCTTCCCCCBCTHHHHHT
T ss_pred             CCC---CCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcC-CeeeecccccCCccccchhhhhcc
Confidence            988   89999999999999999999999876 899999999997 999999877665555555554433

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.92  E-value=1.4e-25  Score=189.26  Aligned_cols=165  Identities=19%  Similarity=0.130  Sum_probs=139.7

Q ss_pred             cccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCc
Q 017201          169 SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  247 (375)
Q Consensus       169 a~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~  247 (375)
                      +++.+++.|||+++.+.+++++|++|||+|+ |++|++++|+||..|+ +|++++++++|.++++++|+++++++.+   
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~---   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT---   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc---
Confidence            4677889999999999999999999999988 9999999999999999 9999999999999999999999999887   


Q ss_pred             ccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCC------ccccchHHHhhcCCceEEEEeec
Q 017201          248 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD------AMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       248 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +++.+.+.+.+.+.|+|+|||++|++ .++.++.+++++ |+++.+|..+.      .+..+++..+++|++++.|++..
T Consensus        84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          84 VNSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             CSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             ccHHHHHHHHhhcCCCceeEEecCch-hhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            77778888888888999999999975 899999999998 99999986432      34456777888899999998765


Q ss_pred             cccC---CCCHHHHHHHHHcC
Q 017201          322 GIKT---KSDLPTLLDKCKNK  339 (375)
Q Consensus       322 ~~~~---~~~~~~~~~~~~~~  339 (375)
                      .+..   ++.++++++++++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence            4421   12355666666654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=3.9e-26  Score=190.12  Aligned_cols=165  Identities=21%  Similarity=0.274  Sum_probs=139.4

Q ss_pred             CcccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          164 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +.+.||+++|++.|||+++ ++++++||++|||+|+|++|++++|+||.+|+ +|++++++++|+++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4466889999999999987 46899999999999999999999999999999 899999999999999999999999876


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCChh--hHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVPS--LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~--~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +  +.++.+.   .  ..++|+++|++++..  .++.++++++++ |+++.+|.+. ....++..+++.|++++.|+..+
T Consensus        80 ~--~~~~~~~---~--~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          80 E--EGDWGEK---Y--FDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPE-QHEMLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             G--TSCHHHH---S--CSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCC-SSCCEEECGGGCBSCEEEECCCC
T ss_pred             c--hHHHHHh---h--hcccceEEEEecCCccchHHHHHHHhhcc-ceEEEecccc-ccccccHHHHHhCCcEEEEEeeC
Confidence            5  1333322   2  237999999987653  467899999997 9999999876 46677888888899999998765


Q ss_pred             cccCCCCHHHHHHHHHcCCCC
Q 017201          322 GIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      +   +++++++++++++|+|+
T Consensus       151 ~---~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 S---IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHTTCC
T ss_pred             C---HHHHHHHHHHHHhCCCC
Confidence            4   46899999999999875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=5.4e-26  Score=189.62  Aligned_cols=148  Identities=23%  Similarity=0.341  Sum_probs=124.5

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~  241 (375)
                      +|+++||++++++.|||+++. .++++||++|||+|+ |++|++++|+||+.|+ +|++++++++|++.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            578999999999999999874 589999999999987 9999999999999999 9999999999999999999999998


Q ss_pred             CCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEeec
Q 017201          242 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  321 (375)
Q Consensus       242 ~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (375)
                      +.+     ..   .+.+.+.|+|+|||++| + .++.++++++++ |+++.+|...+...++++..++.|++++.|++..
T Consensus        79 ~~~-----~~---~~~~~~~g~D~v~d~~G-~-~~~~~~~~l~~~-G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YAE-----VP---ERAKAWGGLDLVLEVRG-K-EVEESLGLLAHG-GRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GGG-----HH---HHHHHTTSEEEEEECSC-T-THHHHHTTEEEE-EEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hhh-----hh---hhhhccccccccccccc-h-hHHHHHHHHhcC-CcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            754     22   33445668999999988 3 689999999997 9999999876667788888888899999998766


Q ss_pred             cc
Q 017201          322 GI  323 (375)
Q Consensus       322 ~~  323 (375)
                      .+
T Consensus       148 ~~  149 (171)
T d1iz0a2         148 PL  149 (171)
T ss_dssp             HH
T ss_pred             Ch
Confidence            54

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.8e-25  Score=179.59  Aligned_cols=130  Identities=15%  Similarity=0.123  Sum_probs=109.8

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCCCC
Q 017201            9 CKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKEVK   84 (375)
Q Consensus         9 ~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~~~   84 (375)
                      |||+++++++++  +++++++.|+|++|||+|||.|+|||++|++ ..|.++. ..+|.++|+|++|+|+++|.+  .++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~~--~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDP--RFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECST--TCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeeccC--Ccc
Confidence            899999998876  7789999999999999999999999999999 8887654 578999999999999998764  699


Q ss_pred             CCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCCCC
Q 017201           85 EGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID  164 (375)
Q Consensus        85 ~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~  164 (375)
                      +||+|++....                       .|...+|                  +|+||++++++.++++|+++|
T Consensus        79 ~g~~v~~~~~~-----------------------~g~~~~G------------------~~Aey~~v~~~~vv~lP~~ls  117 (146)
T d1o89a1          79 AGQEVLLTGWG-----------------------VGENHWG------------------GLAEQARVKGDWLVAMPQGQA  117 (146)
T ss_dssp             TTCEEEEECTT-----------------------BTTTBCC------------------SSBSEEEECGGGCEECCTTSC
T ss_pred             ceeeEEeeccc-----------------------ceecCCC------------------cceeeeeeeeeeEEECCCCCC
Confidence            99999865421                       1333344                  999999999999999999999


Q ss_pred             cccccccccchhhhhhh
Q 017201          165 PSDASFLSCGFTTGYGA  181 (375)
Q Consensus       165 ~~~aa~l~~~~~ta~~~  181 (375)
                      +++||++++++.||+.+
T Consensus       118 ~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1         118 AKEISLSEAPNFAEAII  134 (146)
T ss_dssp             CEEECGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999888888653

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=8.5e-27  Score=192.66  Aligned_cols=151  Identities=21%  Similarity=0.227  Sum_probs=126.6

Q ss_pred             ceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC-CCCCcccCcceeEEEEEeCCCCCC
Q 017201            7 ITCKAVVCWGLGEP--LKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA-PLYPRVLGHEGVGVVESAGDEVKE   82 (375)
Q Consensus         7 ~~~~a~~~~~~~~~--l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~-~~~p~i~G~e~~G~Vv~vG~~v~~   82 (375)
                      .+|||++++..+..  +++++++.|++++|||+|||+|+|||++|++ +.|..+. +..|.++|+|++|+|++  +.+..
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            47999999976644  9999999999999999999999999999999 8887764 46788999999999998  45678


Q ss_pred             CCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEcCCC
Q 017201           83 VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS  162 (375)
Q Consensus        83 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~  162 (375)
                      +++||+|+..+..                       .|...+|                  +|+||+.++++.++++|++
T Consensus        80 ~~~g~~v~~~~~~-----------------------~g~~~~G------------------~~aey~~v~~~~l~~iP~~  118 (162)
T d1tt7a1          80 FAEGDEVIATSYE-----------------------LGVSRDG------------------GLSEYASVPGDWLVPLPQN  118 (162)
T ss_dssp             CCTTCEEEEESTT-----------------------BTTTBCC------------------SSBSSEEECGGGEEECCTT
T ss_pred             cccceeeEeeecc-----------------------ceecccc------------------ccceEEEecHHHEEECCCC
Confidence            9999999865432                       1333344                  9999999999999999999


Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEECC-CH
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GT  201 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~  201 (375)
                      +++++||++++.++|||.++. ..+...+++|||.|+ |.
T Consensus       119 ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         119 LSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGR  157 (162)
T ss_dssp             CCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCSSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCcce
Confidence            999999999999999998754 345666678888876 53

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=4e-27  Score=197.66  Aligned_cols=156  Identities=23%  Similarity=0.197  Sum_probs=127.0

Q ss_pred             cceeeEEEEecCCCC---eEE--EEeecCCCCCCeEEEEEeeeecCCCccc-ccCCCCC----------CCCCcccCcce
Q 017201            6 AITCKAVVCWGLGEP---LKV--EEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPA----------PLYPRVLGHEG   69 (375)
Q Consensus         6 ~~~~~a~~~~~~~~~---l~~--~~~~~p~~~~~ev~V~v~~~~i~~~D~~-~~g~~~~----------~~~p~i~G~e~   69 (375)
                      |.||||+++.+.|+|   +++  .++|.|+|+++||+|||++++||++|++ +.|..+.          ...|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            468999999998876   444  5677778899999999999999999999 8776432          24678899999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeE
Q 017201           70 VGVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYM  149 (375)
Q Consensus        70 ~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~  149 (375)
                      +|+|+++|.++..++.||+|.....                            .                  .|+|+||+
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~----------------------------~------------------~g~~aey~  114 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV----------------------------N------------------FGTWRTHA  114 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS----------------------------C------------------CCCSBSEE
T ss_pred             ccccccccccccccccccceecccc----------------------------c------------------ccccccee
Confidence            9999999999999999999974321                            1                  14899999


Q ss_pred             EeecccEEEcCCCCCcccccccccchhhhhhhhhh-hcCCCCCCEEEEEC-C-CHHHHHHHHH
Q 017201          150 VIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK-EAKVEKGSSVAVLG-L-GTVGLGAVDG  209 (375)
Q Consensus       150 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlI~G-a-g~~G~~ai~l  209 (375)
                      .+++++++++|++++.+.+  +.+...|||+++.. ..++++|++|||+| + |++|++++|+
T Consensus       115 ~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         115 LGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             EEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             eehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            9999999999998754444  44567788887654 46799999999997 4 6799888763

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=5e-25  Score=186.86  Aligned_cols=175  Identities=15%  Similarity=0.115  Sum_probs=140.2

Q ss_pred             CCcccccccccchhhhhhhhhhhcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCeEEEEcCChh----hHHHhhhcCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-GL-GTVGLGAVDGARMHGAAKIIGIDKNPW----KKEKGKAFGM  236 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~-Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~----~~~~~~~lg~  236 (375)
                      +|+++||+++++++|||+++.+.++++||++|+|+ |+ |++|++++|+||++|+ +|++++++++    +.++++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            57899999999999999999888999999999997 65 9999999999999999 8888876543    4567789999


Q ss_pred             cEEeCCCCCCcccHHHHHHhhc--CCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCce
Q 017201          237 TDFINPDDEPNKSISELVKGIT--HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRT  314 (375)
Q Consensus       237 ~~v~~~~~~~~~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  314 (375)
                      ++++++++.+..++.+.+++.+  .+.++|++||++|++ .++.++++|+++ |+++.+|..++.+.+++...+++|+++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~l~~k~~~  157 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNN-GLMLTYGGMSFQPVTIPTSLYIFKNFT  157 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTT-CEEEECCCCSSCCEEECHHHHHHSCCE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCC-cEEEEECCccCCCccCcHHHHHHCCcE
Confidence            9999875311234555555543  344899999999977 789999999998 999999977667788898888889999


Q ss_pred             EEEEeeccccC------CCCHHHHHHHHHcCC
Q 017201          315 LKGTTFGGIKT------KSDLPTLLDKCKNKE  340 (375)
Q Consensus       315 ~~~~~~~~~~~------~~~~~~~~~~~~~~~  340 (375)
                      +.|.++..+..      .+.+.++++++++|+
T Consensus       158 i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         158 SAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99987654321      123566777777664

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=2.5e-23  Score=176.69  Aligned_cols=167  Identities=26%  Similarity=0.285  Sum_probs=139.2

Q ss_pred             ccccccccchhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC
Q 017201          166 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  245 (375)
Q Consensus       166 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~  245 (375)
                      ++.++++.+++|||+++ +.+++++|++|||+|+|++|++++++|+..|+.+|++++++++|++.++++|++.++++.+ 
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~-   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD-   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence            45677888999999986 6799999999999999999999999999999989999999999999999999999999887 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEccCC---------------hhhHHHHHHhcccCCeEEEEEccCCC-c----------
Q 017201          246 PNKSISELVKGITHGMGVDYCFECTGV---------------PSLLSEALETTKVGKGKVIVIGVGVD-A----------  299 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~~-~----------  299 (375)
                        +++.+.+.+++++.++|++||++|.               .+.++.++++++++ |+++.+|.+.. .          
T Consensus        80 --~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 --TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             --SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHT
T ss_pred             --cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhc
Confidence              7999999999999999999999984               35899999999997 99999997643 1          


Q ss_pred             -cccchHHHhhcCCceEEEEeeccccCCCCHHHHHHHHHcCC
Q 017201          300 -MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE  340 (375)
Q Consensus       300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (375)
                       ..+++...++.|++++.+..   ...++.++++++++..++
T Consensus       157 ~~~~~~~~~~~~k~~~i~~g~---~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEESS---CCHHHHHHHHHHHHHTTS
T ss_pred             CceeeeHHHHHhhcceeccCC---CchHHHHHHHHHHHHcCC
Confidence             12344555666888876422   222344677888877654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2e-23  Score=176.54  Aligned_cols=172  Identities=16%  Similarity=0.146  Sum_probs=130.2

Q ss_pred             CCCcccccccccchhhhhhhhhhhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HhhhcCCc
Q 017201          162 SIDPSDASFLSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAFGMT  237 (375)
Q Consensus       162 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~lg~~  237 (375)
                      ++|+.+.| +++++.|||+++.+.+++++|  ++|||+|+ |++|++++|+||.+|+++|+++++++++.. +++++|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            35566654 666899999999999999988  88999987 999999999999999977777777766655 45679999


Q ss_pred             EEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCc------cccc---hHHHh
Q 017201          238 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA------MVPL---NVIAL  308 (375)
Q Consensus       238 ~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~------~~~~---~~~~~  308 (375)
                      .++|+.+   +++.+.+++.++ .|+|+|||++|++ .++.++++++++ |+++.+|..++.      ....   ....+
T Consensus        80 ~vi~~~~---~~~~~~~~~~~~-~GvDvv~D~vGg~-~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~  153 (187)
T d1vj1a2          80 AAVNYKT---GNVAEQLREACP-GGVDVYFDNVGGD-ISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIR  153 (187)
T ss_dssp             EEEETTS---SCHHHHHHHHCT-TCEEEEEESSCHH-HHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHH
T ss_pred             EEeeccc---hhHHHHHHHHhc-cCceEEEecCCch-hHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHH
Confidence            9999998   889999999886 4999999999976 899999999997 999999864431      1111   12235


Q ss_pred             hcCCceEEEEeeccccC--CCCHHHHHHHHHcCC
Q 017201          309 ACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKE  340 (375)
Q Consensus       309 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  340 (375)
                      ..|++++.+..+..+..  .+.++++.+++++|+
T Consensus       154 ~~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         154 KERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HHTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             HhcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            56899998875543311  223556667777664

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=4.7e-23  Score=171.81  Aligned_cols=148  Identities=18%  Similarity=0.215  Sum_probs=125.3

Q ss_pred             CCcccccccccchhhhhhhhh---hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE
Q 017201          163 IDPSDASFLSCGFTTGYGAAW---KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  238 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~  238 (375)
                      +|+.+||+++++..|||++++   +.....++++|||+|+ |++|++++|+||.+|+ +|++++++++|.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578899999999999997753   3344556679999987 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCcccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEE
Q 017201          239 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       239 v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (375)
                      ++|+++   .++.+   .+. ...+|.++|++|++ .+..++.+++++ |+++.+|...+...+++..+++.|++++.|+
T Consensus        80 vi~~~~---~~~~~---~l~-~~~~~~vvD~Vgg~-~~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE---FAESR---PLE-KQVWAGAIDTVGDK-VLAKVLAQMNYG-GCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG---SSSCC---SSC-CCCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc---HHHHH---HHH-hhcCCeeEEEcchH-HHHHHHHHhccc-cceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            999876   33322   222 33689999999987 899999999997 9999999887767788888888899999997


Q ss_pred             ee
Q 017201          319 TF  320 (375)
Q Consensus       319 ~~  320 (375)
                      +.
T Consensus       151 ~~  152 (177)
T d1o89a2         151 DS  152 (177)
T ss_dssp             CS
T ss_pred             ec
Confidence            54

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.86  E-value=3.4e-22  Score=164.91  Aligned_cols=138  Identities=22%  Similarity=0.182  Sum_probs=116.9

Q ss_pred             chhhhhhh---hhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCccc
Q 017201          174 GFTTGYGA---AWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS  249 (375)
Q Consensus       174 ~~~ta~~~---l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~  249 (375)
                      +..|||.+   |.+....+++++|||+|+ |++|++++|+||++|+ +|++++++++|.++++++|++.++++.+     
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~-----   77 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED-----   77 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH-----
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc-----
Confidence            34566644   555666778999999987 9999999999999999 9999999999999999999999987643     


Q ss_pred             HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEEe
Q 017201          250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT  319 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~  319 (375)
                      +.......+.+.++|+|||++|++ .++.++++++++ |+++.+|...+...+++...++.|++++.|..
T Consensus        78 ~~~~~~~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~-G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~  145 (167)
T d1tt7a2          78 VYDGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYG-GSVAVSGLTGGGEVPATVYPFILRGVSLLGID  145 (167)
T ss_dssp             HCSSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEE-EEEEECCCSSCSCEEECSHHHHTSCCEEEECC
T ss_pred             hhchhhhcccCCCceEEEecCcHH-HHHHHHHHhccC-ceEEEeeccCCCcccCCHHHHHHCCcEEEEEe
Confidence            222233445566899999999987 899999999997 99999999887788899999999999999964

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.58  E-value=8.9e-15  Score=116.83  Aligned_cols=134  Identities=17%  Similarity=0.207  Sum_probs=96.9

Q ss_pred             cceeeEEEEecC--CCC----eEEEEeecCCCCCCeEEEEEeeeecCCCcccccCCCCCCCCCcccCcceeEEEEEeCCC
Q 017201            6 AITCKAVVCWGL--GEP----LKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRVLGHEGVGVVESAGDE   79 (375)
Q Consensus         6 ~~~~~a~~~~~~--~~~----l~~~~~~~p~~~~~ev~V~v~~~~i~~~D~~~~g~~~~~~~p~i~G~e~~G~Vv~vG~~   79 (375)
                      +++.|++++...  |.|    |++++.++|+|++|||+||++|.++++....+....   ...-++..+.+|+|++  |+
T Consensus         1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~~---~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           1 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRL---KEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             CCEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGGS---CTTSBCCCCEEEEEEE--ES
T ss_pred             CcccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccccc---ccCCccccceEEEEEE--eC
Confidence            346788888764  333    999999999999999999999999977543222111   1223455678999988  66


Q ss_pred             CCCCCCCCEEEeeccCCCCCCchhhccCcccccccccccccccCCCcccccccCcceecccccCceeeeEEeecccEEEc
Q 017201           80 VKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV  159 (375)
Q Consensus        80 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  159 (375)
                      ++.|++||+|+..                                                  ++|+||.++++..+.++
T Consensus        76 ~~~f~~GD~V~g~--------------------------------------------------~gw~ey~v~~~~~l~kv  105 (147)
T d1v3va1          76 NSAFPAGSIVLAQ--------------------------------------------------SGWTTHFISDGKGLEKL  105 (147)
T ss_dssp             CTTSCTTCEEEEC--------------------------------------------------CCSBSEEEECSSSCEEC
T ss_pred             CCcccCCCEEEEc--------------------------------------------------cCCEeEEEeccceeeEc
Confidence            7889999999732                                                  28999999999999999


Q ss_pred             CCCCCcc-----cccccccchhh-hhhhhhhhcCCCCCCEEEE
Q 017201          160 DPSIDPS-----DASFLSCGFTT-GYGAAWKEAKVEKGSSVAV  196 (375)
Q Consensus       160 p~~~~~~-----~aa~l~~~~~t-a~~~l~~~~~~~~g~~VlI  196 (375)
                      |++.+..     ..+++.....| ||..+.  ...+.|++||+
T Consensus       106 ~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~  146 (147)
T d1v3va1         106 LTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT  146 (147)
T ss_dssp             CTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred             cccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence            8775433     34445555566 454443  44578999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=5.3e-15  Score=103.70  Aligned_cols=73  Identities=19%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             CCcccccccccchhhhhhhhh---hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201          163 IDPSDASFLSCGFTTGYGAAW---KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       163 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      +|++||+.+++++.|||.+++   +....+++++|||+|+ |++|.+++|+||.+|+ +|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998764   4556799999999987 9999999999999999 99999999999999999985

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.19  E-value=5.4e-06  Score=66.61  Aligned_cols=105  Identities=24%  Similarity=0.306  Sum_probs=76.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC---C--------------cccHHH
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE---P--------------NKSISE  252 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~---~--------------~~~~~~  252 (375)
                      +..+|+|+|+|..|+.|++.|+.+|+ +|.+.+.++++++.+++++...+....+.   .              .....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            56799999999999999999999999 99999999999999999987654211000   0              001122


Q ss_pred             HHHhhcCCCCccEEEEccCChh------hHHHHHHhcccCCeEEEEEccCCC
Q 017201          253 LVKGITHGMGVDYCFECTGVPS------LLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g~~~------~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      .+.+...  ..|+||-++--+.      .-+..++.++++ +.++.++.-.+
T Consensus       107 ~l~~~l~--~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqG  155 (183)
T d1l7da1         107 AVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAG  155 (183)
T ss_dssp             HHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGT
T ss_pred             HHHHHHH--hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCC
Confidence            3333222  5899999883221      246889999998 99999976554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.13  E-value=6e-06  Score=65.38  Aligned_cols=98  Identities=21%  Similarity=0.239  Sum_probs=74.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      +..+|+|+|+|..|+.|++.|+.+|+ +|.+.+.+.++++.+++....  .....++   +.+.+.++      ..|+||
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~------~aDivI  100 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA------EADLLI  100 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH------TCSEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhc------cCcEEE
Confidence            56899999999999999999999999 999999999999988765432  1222222   34444443      589999


Q ss_pred             EccCChh------hHHHHHHhcccCCeEEEEEccCCC
Q 017201          268 ECTGVPS------LLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       268 d~~g~~~------~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      .++--+.      .-+..++.++++ +.++.+..-.+
T Consensus       101 ~aalipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqG  136 (168)
T d1pjca1         101 GAVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG  136 (168)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred             EeeecCCcccCeeecHHHHhhcCCC-cEEEEeecCCC
Confidence            9884221      246789999997 99999976554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.79  E-value=0.00016  Score=57.02  Aligned_cols=103  Identities=16%  Similarity=0.152  Sum_probs=70.9

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .+..+--.+.+|||+|+|.+|.+.++.+...|+++++++.++.+|.+ ++++++.. +...     +++.+.+.      
T Consensus        16 ~~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~-----~~~~~~l~------   83 (159)
T d1gpja2          16 ERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF-----DELVDHLA------   83 (159)
T ss_dssp             HHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHHH------
T ss_pred             HHHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc-----hhHHHHhc------
Confidence            34444568889999999999999999888899978999999988865 56677754 3333     34555443      


Q ss_pred             CccEEEEccCChh------hHHHHHHhcccCC-eEEEEEccCC
Q 017201          262 GVDYCFECTGVPS------LLSEALETTKVGK-GKVIVIGVGV  297 (375)
Q Consensus       262 g~d~vid~~g~~~------~~~~~~~~l~~~~-G~iv~~g~~~  297 (375)
                      .+|+||.|++++.      .++..+..-.... -.++.++.+.
T Consensus        84 ~~Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr  126 (159)
T d1gpja2          84 RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR  126 (159)
T ss_dssp             TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred             cCCEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCC
Confidence            5999999998652      3344443332220 2567777664

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.70  E-value=7.1e-05  Score=59.81  Aligned_cols=73  Identities=19%  Similarity=0.186  Sum_probs=56.5

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      .+..++.++++|||+|+|+.+.+++..++..|+++|.++.++++|.+.+. .++... ++...               ..
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~---------------~~   72 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE---------------NQ   72 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT---------------TC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc---------------cc
Confidence            45667778899999999999999999999999889999999999887664 355443 22221               12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      .+|+||+|+.
T Consensus        73 ~~DliINaTp   82 (167)
T d1npya1          73 QADILVNVTS   82 (167)
T ss_dssp             CCSEEEECSS
T ss_pred             chhhheeccc
Confidence            6899999975

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.62  E-value=5.8e-05  Score=64.31  Aligned_cols=101  Identities=11%  Similarity=0.042  Sum_probs=70.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cC-CcE--EeCCCCCCcccHHHHH
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FG-MTD--FINPDDEPNKSISELV  254 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg-~~~--v~~~~~~~~~~~~~~i  254 (375)
                      ...++++||++||=.|+|+ |.++..+|+..|. .+|++++.+++..+.+++    ++ ...  +... +     +    
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~-D-----i----  146 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-D-----I----  146 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-C-----T----
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe-e-----e----
Confidence            4568999999999999874 7788889988753 389999999998888763    22 222  2221 1     1    


Q ss_pred             HhhcCCCCccEEEEccCC-hhhHHHHHHhcccCCeEEEEEcc
Q 017201          255 KGITHGMGVDYCFECTGV-PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .+......||.||-.... ...+..+.+.|+|+ |+++.+..
T Consensus       147 ~~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~P  187 (250)
T d1yb2a1         147 ADFISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  187 (250)
T ss_dssp             TTCCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             ecccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEeC
Confidence            122233479998754543 35789999999997 99988753

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.61  E-value=1.1e-05  Score=67.55  Aligned_cols=102  Identities=25%  Similarity=0.288  Sum_probs=71.2

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcEEe-CCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTDFI-NPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~v~-~~~~~~~~~~~~~i~  255 (375)
                      +.+.+++++|++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++    .+.+.+. ...+     ..   .
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d-----~~---~  137 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD-----GY---Y  137 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC-----GG---G
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCc-----hH---H
Confidence            45788999999999999975 8888899998763 289999999988877653    3433221 1111     00   0


Q ss_pred             hhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          256 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .......||+|+.+.+-....+..++.|+++ |+++..
T Consensus       138 ~~~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         138 GVPEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             CCGGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             ccccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            1112236999998776554556788999998 998763

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.56  E-value=0.00027  Score=60.17  Aligned_cols=106  Identities=21%  Similarity=0.233  Sum_probs=72.1

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCC-CCccE
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHG-MGVDY  265 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~-~g~d~  265 (375)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|-.+  .++..+.+.+.... .++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED--ERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC--HHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhcCCCCe
Confidence            46899999988 9999998888889999 99999999998888888776543 23332  23333333332221 26999


Q ss_pred             EEEccCChh-------------------------hHHHHHHhccc-CCeEEEEEccCC
Q 017201          266 CFECTGVPS-------------------------LLSEALETTKV-GKGKVIVIGVGV  297 (375)
Q Consensus       266 vid~~g~~~-------------------------~~~~~~~~l~~-~~G~iv~~g~~~  297 (375)
                      +|++.|...                         ..+.++..+.+ ++|+++.++...
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            999987421                         23345555533 238999887443

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.54  E-value=5.1e-05  Score=63.17  Aligned_cols=108  Identities=20%  Similarity=0.249  Sum_probs=73.9

Q ss_pred             chhhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEEeCCCCCCccc
Q 017201          174 GFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKS  249 (375)
Q Consensus       174 ~~~ta~~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v~~~~~~~~~~  249 (375)
                      +...|.  +.+.+.+++|++||.+|+| .|..++.+|+..|. +|++++.+++-.+.+    +++|.+.+.....    +
T Consensus        64 P~~~a~--ml~~L~l~~g~~VLeIGsG-sGY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g----d  135 (215)
T d1jg1a_          64 PHMVAI--MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG----D  135 (215)
T ss_dssp             HHHHHH--HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----C
T ss_pred             hhhHHH--HHHhhccCccceEEEecCC-CChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC----c
Confidence            444443  4578899999999999987 48888889988886 899999987665554    4567654321111    1


Q ss_pred             HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ..   ........||.|+-+.+-+..-...+..|+++ |+++..
T Consensus       136 ~~---~g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         136 GS---KGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             GG---GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cc---cCCcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence            10   11122336999987776554556788999997 998874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.41  E-value=0.00049  Score=59.03  Aligned_cols=103  Identities=21%  Similarity=0.257  Sum_probs=74.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCc-EE-eCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMT-DF-INPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~-~v-~~~~~~~~~~~~~~i  254 (375)
                      +...++++||++||=.|+|+ |.+++.+|+..|. .+|++++.+++..+.+++    ++.. .+ +...+     .    
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d-----~----  164 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD-----I----  164 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC-----G----
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc-----c----
Confidence            45788999999999999975 7888899998752 299999999998887753    4542 22 22222     1    


Q ss_pred             HhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEcc
Q 017201          255 KGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ....+...+|.|+.-...+ ..++.+.++|+|+ |+++.+..
T Consensus       165 ~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~P  205 (266)
T d1o54a_         165 SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  205 (266)
T ss_dssp             GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             cccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEeC
Confidence            1223344688887766654 5789999999998 99987753

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.40  E-value=0.00051  Score=58.51  Aligned_cols=107  Identities=17%  Similarity=0.136  Sum_probs=69.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCCC-CcccHHHHHHhhcC-CCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDE-PNKSISELVKGITH-GMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~~-~~~~~~~~i~~~~~-~~g~d~  265 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....+-.-+. +.++..+.+.+... -..+|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            6889999988 9999998888888999 999999998887654 45664332211111 12233333333221 126999


Q ss_pred             EEEccCChh-------------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          266 CFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       266 vid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +|++.|...                         ..+.++..++..+|+++.++...
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999998421                         24456666655459999987543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00042  Score=58.97  Aligned_cols=104  Identities=22%  Similarity=0.225  Sum_probs=68.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEE--eCCCCCCcccHHHHHHhhcCC-CCcc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDF--INPDDEPNKSISELVKGITHG-MGVD  264 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v--~~~~~~~~~~~~~~i~~~~~~-~g~d  264 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++....  .|-.+  .++..+.+.+.... .++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g~iD   81 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRLD   81 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC--HHHHHHHHHHHHHhcCCCC
Confidence            6899999988 9999998888888899 99999999988877654 332222  23333  23333333332221 2699


Q ss_pred             EEEEccCChh--------------------------hHHHHHHhcccCCeEEEEEccC
Q 017201          265 YCFECTGVPS--------------------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       265 ~vid~~g~~~--------------------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++|++.|...                          ..+.++..+++++|+++.++..
T Consensus        82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            9999987320                          2344555555444899988643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.31  E-value=0.00012  Score=61.92  Aligned_cols=101  Identities=19%  Similarity=0.180  Sum_probs=63.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCC---CcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE---PNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~---~~~~~~~~i~~~~~~~g~d~  265 (375)
                      +|++|||+|+ +++|.+.++.....|+ +|+.++.++++....     .........   ..+.+...+.+.....++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEASA-----SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSSE-----EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccccc-----cceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            5899999998 9999999999989999 999988765443211     111111110   01122333334444447999


Q ss_pred             EEEccCChh--------------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          266 CFECTGVPS--------------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       266 vid~~g~~~--------------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +|++.|...                          ....++..++++ |+++.++...
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~  131 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA  131 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence            999987310                          233466677886 9999997543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.29  E-value=0.00031  Score=58.60  Aligned_cols=99  Identities=22%  Similarity=0.280  Sum_probs=68.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcEEeCCCCCCcccHHHHHHhh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      +.+.+.+++|++||-+|+| .|..++.+|+. +. +|++++.+++-.+.+++.    ....++..+.      .   ...
T Consensus        62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~------~---~g~  129 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG------T---LGY  129 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG------G---GCC
T ss_pred             HHHHhhhcccceEEEecCC-CCHHHHHHHHH-hc-ccccccccHHHHHHHHHHHhcccccccccCch------h---hcc
Confidence            4577899999999999997 47777778886 44 899999999888877653    2222222111      0   001


Q ss_pred             cCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          258 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .....||.|+-+.+-+...+..++.|+++ |+++..
T Consensus       130 ~~~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         130 EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhhhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            12235999887666554556778999997 998875

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.25  E-value=0.00031  Score=61.13  Aligned_cols=102  Identities=13%  Similarity=0.115  Sum_probs=70.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      +.+.+++++|++||=+|+| .|-.+..+|+..|+ +|++++.++++.++++    ..|....+....   .+.     ..
T Consensus        53 ~~~~l~l~~G~~VLDiGCG-~G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~---~d~-----~~  122 (291)
T d1kpia_          53 ALDKLNLEPGMTLLDIGCG-WGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGW-----EE  122 (291)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE---CCG-----GG
T ss_pred             HHHhcCCCCCCEEEEecCc-chHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh---hcc-----cc
Confidence            5678899999999999997 35577899999998 9999999999877654    345432211111   111     11


Q ss_pred             cCCCCccEEEE-----ccCC----------hhhHHHHHHhcccCCeEEEEEcc
Q 017201          258 THGMGVDYCFE-----CTGV----------PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       258 ~~~~g~d~vid-----~~g~----------~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .++ .||.|+.     .++.          +..++...++|+|+ |++++-..
T Consensus       123 ~~~-~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         123 FDE-PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             CCC-CCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             ccc-ccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            223 6998853     3332          23588899999998 99887543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.22  E-value=0.00083  Score=54.53  Aligned_cols=77  Identities=18%  Similarity=0.251  Sum_probs=54.4

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-----cCC-cEEeCCCCCCcccHHHHHHhhcC
Q 017201          187 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----FGM-TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----lg~-~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .--+|++|||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+     ... ....|..+   .   +.+.+..+
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~---~---~~~~~~~~   91 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---D---ASRAEAVK   91 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---H---HHHHHHTT
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc---H---HHHHHHhc
Confidence            3568999999998 9999999988899999 99999999988765532     122 22233333   1   22333332


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                        ++|++|++.|.
T Consensus        92 --~iDilin~Ag~  102 (191)
T d1luaa1          92 --GAHFVFTAGAI  102 (191)
T ss_dssp             --TCSEEEECCCT
T ss_pred             --CcCeeeecCcc
Confidence              69999999873

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.21  E-value=0.00012  Score=63.76  Aligned_cols=99  Identities=12%  Similarity=0.112  Sum_probs=69.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE-E-eCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD-F-INPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~-v-~~~~~~~~~~~~~~i~  255 (375)
                      +.++++++||++||=+|+| .|..++.+|+..|+ +|++++.++++.+++++    .|... + +...     ++    .
T Consensus        54 ~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-----d~----~  122 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-----GW----E  122 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-----CG----G
T ss_pred             HHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-----hh----h
Confidence            5678899999999999997 47788899999998 99999999999887754    23211 1 1111     11    1


Q ss_pred             hhcCCCCccEEEE-----ccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHGMGVDYCFE-----CTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~~g~d~vid-----~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .+ ++ .+|.|+.     .++..   ..+..+.++|+|+ |++++-.
T Consensus       123 ~~-~~-~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~  166 (285)
T d1kpga_         123 QF-DE-PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT  166 (285)
T ss_dssp             GC-CC-CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             cc-cc-cccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEE
Confidence            11 22 6887643     33332   3578899999998 9988654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.21  E-value=0.001  Score=48.97  Aligned_cols=92  Identities=8%  Similarity=-0.110  Sum_probs=61.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP--WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++...  +-..++++-+....-  +.+...++          .++++|+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~--~~~~~~dl----------~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVE--GPFDETLL----------DSCWLAI   77 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEE--SSCCGGGG----------TTCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeec--cCCCHHHh----------CCCcEEe
Confidence            47899999999999999999999999 888877543  333333332333222  11111222          2689999


Q ss_pred             EccCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          268 ECTGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      -+.+.+..-.......++. |.++.+..
T Consensus        78 ~at~d~~~n~~i~~~a~~~-~ilVNv~D  104 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESR-RIFCNVVD  104 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHT-TCEEEETT
T ss_pred             ecCCCHHHHHHHHHHHHHc-CCEEEeCC
Confidence            9998885444666677776 88887653

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00078  Score=56.96  Aligned_cols=168  Identities=21%  Similarity=0.200  Sum_probs=96.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD---FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++...   ..|-.+  .++..+.+.+... -.++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccCCc
Confidence            5889999988 9999998888888899 9999999998876553 444322   233333  2333333333322 1269


Q ss_pred             cEEEEccCChh-------------------------hHHHHHHhc--ccCCeEEEEEccCCC-cc-ccchH---------
Q 017201          264 DYCFECTGVPS-------------------------LLSEALETT--KVGKGKVIVIGVGVD-AM-VPLNV---------  305 (375)
Q Consensus       264 d~vid~~g~~~-------------------------~~~~~~~~l--~~~~G~iv~~g~~~~-~~-~~~~~---------  305 (375)
                      |++|++.|...                         ..+.++..+  +.+ |+++.++.... .. .....         
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~II~isS~~~~~~~~~~~~Y~asKaal~  158 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH-GRIITIGSVVGTMGNGGQANYAAAKAGLI  158 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC-CEeeeecchhhcCCCCCCHHHHHHHHHHH
Confidence            99999987431                         234455555  334 99999974322 00 00000         


Q ss_pred             -------HHhhcCCceEEEEeeccccCC---CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC
Q 017201          306 -------IALACGGRTLKGTTFGGIKTK---SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP  366 (375)
Q Consensus       306 -------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  366 (375)
                             ..+-.+++++.....+...++   ...++..+.+.+ +++...    ...-+|+.+++.++.++
T Consensus       159 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~pl~R----~~~pedvA~~v~fL~S~  224 (243)
T d1q7ba_         159 GFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILA-QVPAGR----LGGAQEIANAVAFLASD  224 (243)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHT-TCTTSS----CBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHh-cCCCCC----CCCHHHHHHHHHHHhCc
Confidence                   112346788888776654321   122333333322 222221    22456888888877654

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.0011  Score=56.43  Aligned_cols=103  Identities=17%  Similarity=0.209  Sum_probs=72.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cC---CcEE-eCCCCCCcccHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FG---MTDF-INPDDEPNKSISE  252 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg---~~~v-~~~~~~~~~~~~~  252 (375)
                      +...++++||++||=.|+|+ |.++..||+..|. .+|++++.+++..+.+++    ++   .+.+ +...+     ..+
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d-----~~~  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD-----LAD  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC-----GGG
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc-----ccc
Confidence            55788999999999999874 8888999998863 299999999999888763    21   1111 11111     110


Q ss_pred             HHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEc
Q 017201          253 LVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g  294 (375)
                         ...+...||.||--...+ ..++.+.+.|+++ |+++.+-
T Consensus       162 ---~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 ---SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             ---CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ---ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence               111233799876555543 5789999999998 9998875

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=8.5e-05  Score=63.16  Aligned_cols=102  Identities=22%  Similarity=0.269  Sum_probs=71.5

Q ss_pred             hhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHH
Q 017201          180 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISE  252 (375)
Q Consensus       180 ~~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~  252 (375)
                      ..+...++++||++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .+... +     .  
T Consensus        23 ~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d-----~--   92 (245)
T d1nkva_          23 ATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-D-----A--   92 (245)
T ss_dssp             HHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-C-----C--
T ss_pred             HHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhh-H-----H--
Confidence            3456788999999999999864 6677788888898 99999999988776654    4532   12211 1     1  


Q ss_pred             HHHhhcCCCCccEEEEccC------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          253 LVKGITHGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                        .++.....||.|+-.-.      -...+..+.+.|+|+ |+++...
T Consensus        93 --~~~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          93 --AGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             --TTCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             --hhccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence              11223347999875321      235788899999997 9988753

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.0012  Score=52.38  Aligned_cols=77  Identities=14%  Similarity=0.200  Sum_probs=53.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-c---CCcEEeCCCCCCcccHHHHHHhh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F---GMTDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l---g~~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      |.+..-..+|++|||+|+|+.+.+++..+...|+ +|+.+.|+.+|.+.+.+ +   +....+...+            .
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~------------~   75 (170)
T d1nyta1           9 LERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE------------L   75 (170)
T ss_dssp             HHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG------------G
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc------------c
Confidence            4333334688999999999999998888888998 89999999988765532 3   2222222211            1


Q ss_pred             cCCCCccEEEEccCC
Q 017201          258 THGMGVDYCFECTGV  272 (375)
Q Consensus       258 ~~~~g~d~vid~~g~  272 (375)
                       ....+|++|+|+..
T Consensus        76 -~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 -EGHEFDLIINATSS   89 (170)
T ss_dssp             -TTCCCSEEEECCSC
T ss_pred             -cccccceeeccccc
Confidence             12368999999854

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00093  Score=56.54  Aligned_cols=78  Identities=19%  Similarity=0.273  Sum_probs=57.6

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcE-EeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTD-FINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      -.|+++||+|+ +++|.+.++.....|+ +|+.+++++++++.+.+. +... +.|...   ++..+...+..+  ++|+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~--~id~   77 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEVE--RLDV   77 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHCS--CCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccc---cccccccccccc--ccee
Confidence            36889999988 9999998888888899 999999999988776654 3322 233332   455555544433  6999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      ++++.|.
T Consensus        78 lVn~ag~   84 (245)
T d2ag5a1          78 LFNVAGF   84 (245)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999875

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00067  Score=56.60  Aligned_cols=96  Identities=23%  Similarity=0.290  Sum_probs=66.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCc-------EEeCCCCCCcccHHHHH
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMT-------DFINPDDEPNKSISELV  254 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~-------~v~~~~~~~~~~~~~~i  254 (375)
                      .++||++||-+|+|. |..++.+|+..|. .+|++++.+++-.+.+++    .+..       .+... +     ..   
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g-D-----~~---  142 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG-D-----GR---  142 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES-C-----GG---
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe-e-----cc---
Confidence            789999999999974 8888888988763 389999999877766542    2221       11111 1     00   


Q ss_pred             HhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          255 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ........||.|+-+..-+...+..++.|+++ |+++..
T Consensus       143 ~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         143 MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            01112236999988776665567889999997 999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00093  Score=56.51  Aligned_cols=78  Identities=21%  Similarity=0.279  Sum_probs=55.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcE--EeCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD--FINPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++...  ..|-.+   .+-.+++.+.. + .+|
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~-g-~iD   78 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---WEATERALGSV-G-PVD   78 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-C-CCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHh-C-Cce
Confidence            37899999988 9999998888888999 9999999998876553 444322  234433   33333333322 2 699


Q ss_pred             EEEEccCC
Q 017201          265 YCFECTGV  272 (375)
Q Consensus       265 ~vid~~g~  272 (375)
                      ++|++.|.
T Consensus        79 ilVnnAg~   86 (244)
T d1pr9a_          79 LLVNNAAV   86 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.13  E-value=0.0013  Score=52.33  Aligned_cols=97  Identities=15%  Similarity=0.041  Sum_probs=64.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +++|||+|+|-+|...++.+...|+ +|++++++.++.+.+.+ ++...+..... .........   ..  ..|.++.+
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~-~~~~~~~~~---i~--~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV-NDDAALDAE---VA--KHDLVISL   74 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT-TCHHHHHHH---HT--TSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccc-cchhhhHhh---hh--ccceeEee
Confidence            6799999999999998888888899 99999999999887654 44333322111 011111111   11  47888888


Q ss_pred             cCChhhHHHHHHhcccCCeEEEEEcc
Q 017201          270 TGVPSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      .........+..++..+ ..++....
T Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~   99 (182)
T d1e5qa1          75 IPYTFHATVIKSAIRQK-KHVVTTSY   99 (182)
T ss_dssp             SCGGGHHHHHHHHHHHT-CEEECSSC
T ss_pred             ccchhhhHHHHHHHhhc-cceeeccc
Confidence            87665555666666665 66655543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.11  E-value=0.0017  Score=55.05  Aligned_cols=169  Identities=16%  Similarity=0.232  Sum_probs=95.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-----hhcCCcEE---eCCCCCCcccHHHHHHhhcCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-----KAFGMTDF---INPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     +++|....   .|-.+  .++..+.+.+....
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5889999988 9999998888888899 999999998876433     34454322   23333  23333333332211


Q ss_pred             -CCccEEEEccCChh-------------------------hHHHHHHhccc-CCeEEEEEccCCC-c-c-ccchHH----
Q 017201          261 -MGVDYCFECTGVPS-------------------------LLSEALETTKV-GKGKVIVIGVGVD-A-M-VPLNVI----  306 (375)
Q Consensus       261 -~g~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~iv~~g~~~~-~-~-~~~~~~----  306 (375)
                       .++|++|++.|...                         ..+.++..+.+ ++|+++.++.... . . ......    
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK  160 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK  160 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence             26999999987421                         33445666633 2379998864321 1 1 111111    


Q ss_pred             ------------HhhcCCceEEEEeeccccCCCCH-----HHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC
Q 017201          307 ------------ALACGGRTLKGTTFGGIKTKSDL-----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP  366 (375)
Q Consensus       307 ------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  366 (375)
                                  .+..+++++.....+...+.-.-     ++..+.+.+. ++..+    .-.-+|+.++.-.+.+.
T Consensus       161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~pl~R----~~~pedvA~~v~fL~S~  232 (251)
T d1vl8a_         161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR-IPLGR----TGVPEDLKGVAVFLASE  232 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHT-CTTSS----CBCGGGGHHHHHHHHSG
T ss_pred             HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhc-CCCCC----CCCHHHHHHHHHHHhCc
Confidence                        12246789888877655432111     1222222221 22212    22357888888877654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.09  E-value=0.0011  Score=56.01  Aligned_cols=77  Identities=18%  Similarity=0.198  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCC-cE-EeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGM-TD-FINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~-~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++. .. ..|-.+   .+..+.+.+.. + ++|+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g-~iDi   77 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WDATEKALGGI-G-PVDL   77 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-C-CCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHc-C-CCeE
Confidence            5899999988 9999998888888999 9999999988876553 4432 22 233333   33333333322 2 6999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        78 lVnnAg~   84 (242)
T d1cyda_          78 LVNNAAL   84 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.08  E-value=0.00082  Score=54.27  Aligned_cols=100  Identities=11%  Similarity=0.034  Sum_probs=66.2

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC----Cc--------------EEeCCCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MT--------------DFINPDD  244 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----~~--------------~v~~~~~  244 (375)
                      +....+.||++||.+|+|. |..++.||+. |+ +|++++.+++-.+.+++..    ..              .++..+-
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            4566899999999999974 7888888875 88 9999999999988887531    10              0110000


Q ss_pred             CCcccHHHHHHhhcCCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEEc
Q 017201          245 EPNKSISELVKGITHGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       245 ~~~~~~~~~i~~~~~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                         .++...     ....+|.|++....        ...+....++|+++ |+++...
T Consensus        90 ---~~l~~~-----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 ---FALTAR-----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             ---SSSTHH-----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ---cccccc-----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence               011000     11258998875542        13567788999997 9876543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.05  E-value=0.0016  Score=55.25  Aligned_cols=96  Identities=23%  Similarity=0.341  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE-EeCCCCCCcccHHHHHHhhcCCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD-FINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ..++|++||=+|+|. |.+++.+++ .|+ +|++++.+++-.+.+++    .+... ++.      .+...    .....
T Consensus       117 ~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~------~d~~~----~~~~~  183 (254)
T d2nxca1         117 HLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEA----ALPFG  183 (254)
T ss_dssp             HCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHH----HGGGC
T ss_pred             hcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe------ccccc----ccccc
Confidence            368999999999974 777776554 687 89999999988877753    34322 222      12222    12223


Q ss_pred             CccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccC
Q 017201          262 GVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       262 g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .||+|+.+....   ..++...+.|+|+ |+++..|..
T Consensus       184 ~fD~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgil  220 (254)
T d2nxca1         184 PFDLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             CEEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             ccchhhhccccccHHHHHHHHHHhcCCC-cEEEEEecc
Confidence            799998765433   2456788999997 999876543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.05  E-value=0.0022  Score=54.65  Aligned_cols=80  Identities=21%  Similarity=0.327  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcCC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITHG-  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~-  260 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|.+.   ..|-.+  .++..+.+.+.... 
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            6899999988 9999998888888999 999999998887654    3345432   223333  23333333332211 


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|++|++.|.
T Consensus        81 g~iDilVnnaG~   92 (260)
T d1zema1          81 GKIDFLFNNAGY   92 (260)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCeehhhhcc
Confidence            269999998873

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00086  Score=54.94  Aligned_cols=74  Identities=15%  Similarity=0.146  Sum_probs=53.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .++|+|+|+ |.+|...++.+...|+ +|+++++++++.......+...+. |..+     . +.+.+...  +.|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~gD~~d-----~-~~l~~al~--~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ-----A-ADVDKTVA--GQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS-----H-HHHHHHHT--TCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccccccccccc-----h-hhHHHHhc--CCCEEEE
Confidence            478999998 9999998888888898 999999999987655555665443 3322     2 12322222  5899999


Q ss_pred             ccCCh
Q 017201          269 CTGVP  273 (375)
Q Consensus       269 ~~g~~  273 (375)
                      ++|..
T Consensus        74 ~~g~~   78 (205)
T d1hdoa_          74 LLGTR   78 (205)
T ss_dssp             CCCCT
T ss_pred             EeccC
Confidence            98753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.0019  Score=51.84  Aligned_cols=97  Identities=16%  Similarity=0.135  Sum_probs=60.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hc----CC-cEEeCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AF----GM-TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~l----g~-~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.+.+|||+|+|+.+.+++..+...|+++++.+.+++++.+.+.    ++    .. ..+.+..+  .+.+...+     
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----   88 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEAL-----   88 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHH-----
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc--ccchhhhh-----
Confidence            47789999999999999888888889989999999887765433    22    21 22333332  12222222     


Q ss_pred             CCCccEEEEccCCh------hhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFECTGVP------SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~~g~~------~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       ..+|+||+|+.-.      +.+..-...+.++ ..++.+-
T Consensus        89 -~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~  127 (182)
T d1vi2a1          89 -ASADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECV  127 (182)
T ss_dssp             -HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECC
T ss_pred             -cccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhh
Confidence             1589999998522      0111113455665 6666653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.03  E-value=0.0011  Score=55.92  Aligned_cols=80  Identities=16%  Similarity=0.206  Sum_probs=55.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCcEE-eCCCCCCcccHHHHHHhhcCC-CCccE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF-INPDDEPNKSISELVKGITHG-MGVDY  265 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~~i~~~~~~-~g~d~  265 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++++..+ .|-.+  .++..+.+.+.... .++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC--HHHHHHHHHHHHHhcCCceE
Confidence            5889999988 9999999888888999 9999999998877654 4565443 23333  23333333332211 26999


Q ss_pred             EEEccCC
Q 017201          266 CFECTGV  272 (375)
Q Consensus       266 vid~~g~  272 (375)
                      +|++.|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999874

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.01  E-value=0.00025  Score=61.53  Aligned_cols=102  Identities=11%  Similarity=0.145  Sum_probs=68.7

Q ss_pred             hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHh
Q 017201          181 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKG  256 (375)
Q Consensus       181 ~l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~  256 (375)
                      .+.+.++++||++||=+|+|. |..+..+++..|+ +|++++.+++..+++++    .|....+....   .+.    ..
T Consensus        43 ~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~---~d~----~~  113 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL---QGW----ED  113 (280)
T ss_dssp             HHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE---SCG----GG
T ss_pred             HHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh---hhh----hh
Confidence            356788999999999999974 4466788999998 99999999999887754    34321110000   111    11


Q ss_pred             hcCCCCccEEEE-----ccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          257 ITHGMGVDYCFE-----CTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       257 ~~~~~g~d~vid-----~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      . ++ .||.|+-     .++..   ..++...++|+|+ |+++.-.
T Consensus       114 ~-~~-~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~  156 (280)
T d2fk8a1         114 F-AE-PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS  156 (280)
T ss_dssp             C-CC-CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             h-cc-chhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence            1 22 6888853     33322   3578899999998 9988743

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.94  E-value=0.0036  Score=49.86  Aligned_cols=93  Identities=19%  Similarity=0.191  Sum_probs=60.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCC-------CCCCcccHHHHHHhhcCCCCc
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-------DDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~-------~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      .+++.|+|+|.+|++.+..+...|+ .|+..++++++.+.+++.+.......       ......+..+.+.      +.
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~------~a   73 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK------DA   73 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT------TC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc------CC
Confidence            3689999999999998888888999 99999999999888876553221100       0000122333332      58


Q ss_pred             cEEEEccCChh---hHHHHHHhcccCCeEEE
Q 017201          264 DYCFECTGVPS---LLSEALETTKVGKGKVI  291 (375)
Q Consensus       264 d~vid~~g~~~---~~~~~~~~l~~~~G~iv  291 (375)
                      |++|-++....   .+++....+.++ ..++
T Consensus        74 D~iii~v~~~~~~~~~~~i~~~l~~~-~~iv  103 (184)
T d1bg6a2          74 DVILIVVPAIHHASIAANIASYISEG-QLII  103 (184)
T ss_dssp             SEEEECSCGGGHHHHHHHHGGGCCTT-CEEE
T ss_pred             CEEEEEEchhHHHHHHHHhhhccCCC-CEEE
Confidence            99999997662   233334455554 4444

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.0033  Score=53.38  Aligned_cols=81  Identities=22%  Similarity=0.330  Sum_probs=54.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCC--cE---EeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM--TD---FINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~--~~---v~~~~~~~~~~~~~~i~~~~  258 (375)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.  ..   ..|-.+  +++..+.+....
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~v~~~~   84 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIR   84 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence            35789999988 9999998888888899 999999999887654    23332  21   123333  233333333322


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . -.++|++|++.|.
T Consensus        85 ~~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          85 SQHSGVDICINNAGL   99 (257)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HhcCCCCEEEecccc
Confidence            1 1269999999975

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.0019  Score=45.65  Aligned_cols=70  Identities=20%  Similarity=0.273  Sum_probs=47.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      +|++|+|+|.|..|+++++++...|+ +|++.+.+..  ..+.++. +....+...+   ..   .+.      ++|.++
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~---~~---~~~------~~d~vi   69 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLPE-AVERHTGSLN---DE---WLM------AADLIV   69 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSCT-TSCEEESBCC---HH---HHH------HCSEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHhh-ccceeecccc---hh---hhc------cCCEEE
Confidence            57899999999999999999999999 9999997543  2333332 2233333222   11   111      589998


Q ss_pred             EccCCh
Q 017201          268 ECTGVP  273 (375)
Q Consensus       268 d~~g~~  273 (375)
                      -+-|-+
T Consensus        70 ~SPGi~   75 (93)
T d2jfga1          70 ASPGIA   75 (93)
T ss_dssp             ECTTSC
T ss_pred             ECCCCC
Confidence            887755

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.90  E-value=0.0026  Score=53.82  Aligned_cols=168  Identities=17%  Similarity=0.140  Sum_probs=95.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-C
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~  260 (375)
                      .++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  .++..+.+.+... .
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4788899988 9999998888778899 999999998887544    3455432   223333  2333333333221 1


Q ss_pred             CCccEEEEccCChh-------------------------hHHHHHHhc--ccCCeEEEEEccCCC-cc-ccchH------
Q 017201          261 MGVDYCFECTGVPS-------------------------LLSEALETT--KVGKGKVIVIGVGVD-AM-VPLNV------  305 (375)
Q Consensus       261 ~g~d~vid~~g~~~-------------------------~~~~~~~~l--~~~~G~iv~~g~~~~-~~-~~~~~------  305 (375)
                      .++|++|++.|...                         ..+.++..+  +. +|+|+.++.... .. .....      
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKa  164 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKA  164 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHHHHHH
Confidence            26999999887531                         223334333  33 399999974432 10 00010      


Q ss_pred             ----------HHhhcCCceEEEEeeccccCC---CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC
Q 017201          306 ----------IALACGGRTLKGTTFGGIKTK---SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP  366 (375)
Q Consensus       306 ----------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  366 (375)
                                ..+..+++++.....+...+.   ...++..+.+.+. ++...    .-.-+|+.++...+.+.
T Consensus       165 al~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~-~pl~R----~~~pedvA~~v~fL~S~  233 (251)
T d2c07a1         165 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISN-IPAGR----MGTPEEVANLACFLSSD  233 (251)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTT-CTTSS----CBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhc-CCCCC----CcCHHHHHHHHHHHhCc
Confidence                      113346788888776654321   2234444444332 22222    22346788888877654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.88  E-value=0.0032  Score=49.44  Aligned_cols=86  Identities=20%  Similarity=0.280  Sum_probs=60.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|.|+|+|.+|...+..++..|. +|++.++++++.+.+++.+. +...+..+        .    .  ...|+||-++.
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~--------~----~--~~~DiIilavp   66 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS--------L----L--QTAKIIFLCTP   66 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG--------G----G--TTCSEEEECSC
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc--------c----c--cccccccccCc
Confidence            68999999999987777788898 99999999999999988885 33332211        1    1  26899999886


Q ss_pred             Ch---hhHHHHHHhcccCCeEEEEEc
Q 017201          272 VP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ..   +.+++....+.++ ..++.++
T Consensus        67 ~~~~~~vl~~l~~~l~~~-~iv~~~~   91 (165)
T d2f1ka2          67 IQLILPTLEKLIPHLSPT-AIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             Hhhhhhhhhhhhhhcccc-cceeecc
Confidence            43   2344455555665 5555554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.84  E-value=0.0023  Score=54.45  Aligned_cols=80  Identities=18%  Similarity=0.234  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHH---HHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISE---LVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~---~i~~~~  258 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+...   ..|-.+  .++..+   .+.+..
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   81 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC--HHHHHHHHHHHHHHh
Confidence            7899999988 9999999988888999 999999998876544    3444433   234333  222322   233333


Q ss_pred             CCCCccEEEEccCCh
Q 017201          259 HGMGVDYCFECTGVP  273 (375)
Q Consensus       259 ~~~g~d~vid~~g~~  273 (375)
                      ++ ..|+++++.|..
T Consensus        82 ~g-~idilinnag~~   95 (258)
T d1ae1a_          82 DG-KLNILVNNAGVV   95 (258)
T ss_dssp             TS-CCCEEEECCCCC
T ss_pred             CC-CcEEEecccccc
Confidence            33 689999988753

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.82  E-value=0.00043  Score=58.23  Aligned_cols=100  Identities=21%  Similarity=0.251  Sum_probs=61.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC---cccHHHHHHhhcCCCCccEE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP---NKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~---~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.+++++++....     ...+..+...   .....+.+........+|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQADS-----NILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSSE-----EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcccc-----cceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457899998 9999998888888899 999999876643211     1111111100   01112222332233479999


Q ss_pred             EEccCChh--------------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          267 FECTGVPS--------------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       267 id~~g~~~--------------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      |++.|...                          ..+.++..++++ |+++.++...
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~~  131 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAAA  131 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccHH
Confidence            99987310                          234566777886 9999987543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.80  E-value=0.0066  Score=50.87  Aligned_cols=169  Identities=19%  Similarity=0.196  Sum_probs=98.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE---eCCCCCCcccHHHHHHhhcCC-CC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF---INPDDEPNKSISELVKGITHG-MG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~-~g  262 (375)
                      -.|+++||+|+ +++|.+.++-+...|+ +|+.+.++.++.+.+ ++++.+..   .|-.+  .++..+.+.+.... .+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~--~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence            36899999988 9999998888889999 999999999887554 45665432   23333  23333333333221 26


Q ss_pred             ccEEEEccCChh-------------------------hHHHHHHhcccCCeEEEEEccCCCcc-ccchH-----------
Q 017201          263 VDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVGVDAM-VPLNV-----------  305 (375)
Q Consensus       263 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~~~~~-~~~~~-----------  305 (375)
                      +|+.|++.+...                         ..+..+..+... +.++.++...... .....           
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~a~~~~~~~~~Y~~sK~al~~l  158 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVAGLGAFGLAHYAAGKLGVVGL  158 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCTTCCHHHHHHHHHCSSHHHHH
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeeccccccccccCccccchhhHHHHHH
Confidence            999999886431                         234456666775 6766665443211 11111           


Q ss_pred             -----HHhhcCCceEEEEeeccccCC---CCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHcCC
Q 017201          306 -----IALACGGRTLKGTTFGGIKTK---SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP  366 (375)
Q Consensus       306 -----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  366 (375)
                           .++..+++++.....+...+.   ...++..+.+.+. .....+    ..-+|+.+++..+.+.
T Consensus       159 t~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~-~p~~r~----~~p~dva~~v~fL~S~  222 (241)
T d2a4ka1         159 ARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGA-SPLGRA----GRPEEVAQAALFLLSE  222 (241)
T ss_dssp             HHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHT-STTCSC----BCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhC-CCCCCC----cCHHHHHHHHHHHhcc
Confidence                 012336788888776654321   1233444443332 222221    2347888888887654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.0039  Score=48.58  Aligned_cols=94  Identities=23%  Similarity=0.274  Sum_probs=69.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      -.-.|++|+|+|-|-+|...++.++.+|+ +|++++.+|-+.-.+.--|... .        .+.+.+.      ..|++
T Consensus        20 ~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~v-~--------~~~~a~~------~adiv   83 (163)
T d1li4a1          20 VMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYEV-T--------TMDEACQ------EGNIF   83 (163)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C--------CHHHHTT------TCSEE
T ss_pred             ceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceEe-e--------ehhhhhh------hccEE
Confidence            35689999999999999999999999999 9999999987765554445432 1        1222221      47999


Q ss_pred             EEccCChhh-HHHHHHhcccCCeEEEEEccCC
Q 017201          267 FECTGVPSL-LSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       267 id~~g~~~~-~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +-++|+... -.+-++.++++ ..+..+|...
T Consensus        84 vtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghfd  114 (163)
T d1li4a1          84 VTTTGCIDIILGRHFEQMKDD-AIVCNIGHFD  114 (163)
T ss_dssp             EECSSCSCSBCHHHHTTCCTT-EEEEECSSST
T ss_pred             EecCCCccchhHHHHHhccCC-eEEEEecccc
Confidence            999998643 34778888986 7776666554

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.002  Score=55.14  Aligned_cols=44  Identities=18%  Similarity=0.158  Sum_probs=37.7

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      .-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~   55 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVV   55 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            357899999998 9999988777777899 9999999999887653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.75  E-value=0.0042  Score=52.76  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC--
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH--  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~--  259 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+....   .|-.+  .++..+.+.+...  
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC--HHHHHHHHHHHHHHh
Confidence            6899999988 9999998888888899 999999998887654    23443322   23333  2333333333322  


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      +..+|++|++.|.
T Consensus        84 ~~~idilvnnAG~   96 (259)
T d2ae2a_          84 HGKLNILVNNAGI   96 (259)
T ss_dssp             TTCCCEEEECCCC
T ss_pred             CCCceEEEECCce
Confidence            2259999999874

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.74  E-value=0.0048  Score=46.48  Aligned_cols=73  Identities=21%  Similarity=0.284  Sum_probs=55.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +++|+|.|.+|...++.+...|. .|++++.++++.+.++..+...++ |..+   .++.+..    +=...|.+|-+++
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~~---~~~l~~a----~i~~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANATE---ENELLSL----GIRNFEYVIVAIG   73 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTTC---TTHHHHH----TGGGCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeeccc---chhhhcc----CCccccEEEEEcC
Confidence            57888999999999999999999 999999999999999888876544 3322   3443322    1125888888887


Q ss_pred             Ch
Q 017201          272 VP  273 (375)
Q Consensus       272 ~~  273 (375)
                      +.
T Consensus        74 ~~   75 (134)
T d2hmva1          74 AN   75 (134)
T ss_dssp             SC
T ss_pred             ch
Confidence            65

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.71  E-value=0.0016  Score=55.40  Aligned_cols=80  Identities=16%  Similarity=0.188  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF---INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|-.+  .++..+.+.+... -.++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD--QASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence            5789999988 9999998888888999 999999998887654 45665432   23333  2333333333221 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        81 DilVnnAg~   89 (256)
T d1k2wa_          81 DILVNNAAL   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEeeccc
Confidence            999999884

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.70  E-value=0.0023  Score=54.26  Aligned_cols=80  Identities=18%  Similarity=0.182  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE---EeCCCCCCcccHHHHHHhhcCC-CCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGITHG-MGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~~i~~~~~~-~g~  263 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|-.+  .++..+.+.+.... .++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC--HHHHHHHHHHHHHHcCCc
Confidence            6899999988 9999998888888899 899999998887654 4555432   223332  23333333332211 269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        81 DilVnnAg~   89 (254)
T d1hdca_          81 DGLVNNAGI   89 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEecCcc
Confidence            999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.70  E-value=0.0028  Score=54.20  Aligned_cols=79  Identities=19%  Similarity=0.212  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC---CcEE--eCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG---MTDF--INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg---~~~v--~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++   ....  .|-.+  .++..+.+.+... ..
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            6899999988 9999998888888899 9999999998876543 332   2222  23333  2333333333221 12


Q ss_pred             CccEEEEccC
Q 017201          262 GVDYCFECTG  271 (375)
Q Consensus       262 g~d~vid~~g  271 (375)
                      .+|++|++.|
T Consensus        82 ~iD~lVnnAG   91 (268)
T d2bgka1          82 KLDIMFGNVG   91 (268)
T ss_dssp             CCCEEEECCC
T ss_pred             Ccceeccccc
Confidence            6999999887

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.69  E-value=0.0055  Score=51.15  Aligned_cols=72  Identities=19%  Similarity=0.182  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+   +.+...+. |-.    +.. +.+.+..+  .+|++|
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~---~~~~~~~~~Dv~----~~~-~~~~~~~g--~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLK---RSGHRYVVCDLR----KDL-DLLFEKVK--EVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH---HTCSEEEECCTT----TCH-HHHHHHSC--CCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH---hcCCcEEEcchH----HHH-HHHHHHhC--CCcEEE
Confidence            5889999988 9999999988888999 9999999876654   44544333 222    223 33333332  699999


Q ss_pred             EccCC
Q 017201          268 ECTGV  272 (375)
Q Consensus       268 d~~g~  272 (375)
                      ++.|.
T Consensus        72 nnAG~   76 (234)
T d1o5ia_          72 LNAGG   76 (234)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99874

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.69  E-value=0.0019  Score=53.68  Aligned_cols=96  Identities=21%  Similarity=0.300  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc---CC---CeEEEEcCChhhHHHhhh---------cCCcE--EeCCCCCCccc
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMH---GA---AKIIGIDKNPWKKEKGKA---------FGMTD--FINPDDEPNKS  249 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~---G~---~~V~~~~~~~~~~~~~~~---------lg~~~--v~~~~~~~~~~  249 (375)
                      .+++|++||.+|+| .|..++.+++..   |+   .+|++++.+++-.+.+++         ++...  ++.. +     
T Consensus        77 ~l~~g~~VLeIGtG-sGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~-d-----  149 (223)
T d1r18a_          77 HLKPGARILDVGSG-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG-D-----  149 (223)
T ss_dssp             TCCTTCEEEEESCT-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES-C-----
T ss_pred             ccCCCCeEEEecCC-CCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec-c-----
Confidence            78999999999885 255555555544   42   279999998876665532         12111  2211 1     


Q ss_pred             HHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEE
Q 017201          250 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ..   ........||.|+-+.+-+...+..++.|+++ |+++..
T Consensus       150 ~~---~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~p  189 (223)
T d1r18a_         150 GR---KGYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  189 (223)
T ss_dssp             GG---GCCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cc---cccccccceeeEEEEeechhchHHHHHhcCCC-cEEEEE
Confidence            10   01122336999887776654556788999997 998773

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.69  E-value=0.0054  Score=52.01  Aligned_cols=103  Identities=17%  Similarity=0.248  Sum_probs=65.8

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHH----hhhcCCcEE---eCCCCCCcccHHHHHHhhc
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEK----GKAFGMTDF---INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~~~----~~~lg~~~v---~~~~~~~~~~~~~~i~~~~  258 (375)
                      .-.|+++||+|+ +++|.+.++.+...|+ +|+.+. ++++..+.    +++.|....   .|-.+  .++..+.+.+..
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~   79 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK--PSEVVALFDKAV   79 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCC--HHHHHHHHHHHH
Confidence            457899999988 9999999999999999 787765 44444433    345665432   23322  233333333322


Q ss_pred             C-CCCccEEEEccCChh-------------------------hHHHHHHhcccCCeEEEEEc
Q 017201          259 H-GMGVDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~-~~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g  294 (375)
                      . ..++|++|++.|...                         ..+.++..+++. |.++.+.
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~  140 (259)
T d1ja9a_          80 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTS  140 (259)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Ccccccc
Confidence            1 125999999998531                         345677777776 7777764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.68  E-value=0.0078  Score=51.35  Aligned_cols=104  Identities=22%  Similarity=0.206  Sum_probs=67.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HhhhcCCcEEe---CCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKE----KGKAFGMTDFI---NPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~----~~~~lg~~~v~---~~~~~~~~~~~~~i~~~~~  259 (375)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.++++. +..+    .+++.+.+...   |-.+  .+++.+.+.+...
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~   92 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV--VEDIVRMFEEAVK   92 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCC--HHHHHHHHHHHHH
Confidence            35899999988 9999998888888999 898887664 3333    23455554322   3322  2344444333322


Q ss_pred             C-CCccEEEEccCChh-------------------------hHHHHHHhcccCCeEEEEEccC
Q 017201          260 G-MGVDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       260 ~-~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      . .++|+++++.+...                         ..+.++..+.+. |+++.++..
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            1 26999999987531                         345677778887 888887543

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00076  Score=59.44  Aligned_cols=104  Identities=19%  Similarity=0.186  Sum_probs=68.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhh----cC-----------CcE--EeCCC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKA----FG-----------MTD--FINPD  243 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~----lg-----------~~~--v~~~~  243 (375)
                      +...++++||++||=.|+|. |.+++.||+..|.. +|++++.+++..+.+++    ++           .+.  +...+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            45678999999999999975 88899999988643 89999999988887653    11           111  11111


Q ss_pred             CCCcccHHHHHHhhcCCCCccEEEEccCCh-hhHHHHHHhcccCCeEEEEEc
Q 017201          244 DEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       244 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      -   .+....   + ....+|.||--...+ ..+..+.++|+|+ |+++.+-
T Consensus       169 i---~~~~~~---~-~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 I---SGATED---I-KSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             T---TCCC-----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             h---hhcccc---c-CCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            0   111111   1 122588876444433 4789999999997 9999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.67  E-value=0.0019  Score=55.50  Aligned_cols=79  Identities=19%  Similarity=0.142  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcE---EeCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++...   ..|-.+  .++..+.+.+... -..+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHhCCc
Confidence            5899999988 9999998888888899 999999999887654 4455432   223333  2233333322221 1269


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |+++++.|
T Consensus        81 dilvnnAG   88 (276)
T d1bdba_          81 DTLIPNAG   88 (276)
T ss_dssp             CEEECCCC
T ss_pred             cccccccc
Confidence            99999887

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.66  E-value=0.0062  Score=45.81  Aligned_cols=74  Identities=18%  Similarity=0.167  Sum_probs=55.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+++ ++...+. |..+   .++   +.+. +=..+|.++-++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~---~~~---l~~~-~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCTK---IKT---LEDA-GIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTTS---HHH---HHHT-TTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhccCcccc---hhh---hhhc-ChhhhhhhcccC
Confidence            68999999999999999999998 99999999999887764 5665443 2222   232   3332 223789999988


Q ss_pred             CChh
Q 017201          271 GVPS  274 (375)
Q Consensus       271 g~~~  274 (375)
                      .+++
T Consensus        74 ~~d~   77 (132)
T d1lssa_          74 GKEE   77 (132)
T ss_dssp             SCHH
T ss_pred             CcHH
Confidence            8763

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.65  E-value=0.0033  Score=52.92  Aligned_cols=81  Identities=15%  Similarity=0.069  Sum_probs=55.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF---INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|-.+  .++..+.+.+... -.+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence            36899999988 9999998888888999 999999999887655 34543221   23333  2333333333322 126


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+++++.|.
T Consensus        81 idilinnAG~   90 (244)
T d1nffa_          81 LHVLVNNAGI   90 (244)
T ss_dssp             CCEEEECCCC
T ss_pred             CeEEEECCcc
Confidence            9999999975

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0048  Score=51.87  Aligned_cols=82  Identities=18%  Similarity=0.144  Sum_probs=55.2

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      -.|+++||+|+ +++|...+......|+ +|+.+++++++++.+    ++.|...   ..|-.+  .++..+.+++... 
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAE   81 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHH
Confidence            36899999988 9999987777777899 999999999887654    3445432   234433  2333333333321 


Q ss_pred             CCCccEEEEccCCh
Q 017201          260 GMGVDYCFECTGVP  273 (375)
Q Consensus       260 ~~g~d~vid~~g~~  273 (375)
                      -..+|++|++.|..
T Consensus        82 ~g~idilinnag~~   95 (244)
T d1yb1a_          82 IGDVSILVNNAGVV   95 (244)
T ss_dssp             TCCCSEEEECCCCC
T ss_pred             cCCCceeEeecccc
Confidence            22699999999853

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.62  E-value=0.017  Score=44.92  Aligned_cols=109  Identities=18%  Similarity=0.213  Sum_probs=70.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      +|.|+|.|.+|...++-+...|+ +|++.++++++.+.+.+.++...        .+..+.++      ..|+||-|+.+
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~~------~~d~ii~~v~~   66 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA--------STAKAIAE------QCDVIITMLPN   66 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------SSHHHHHH------HCSEEEECCSS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc--------ccHHHHHh------CCCeEEEEcCC
Confidence            58899999999976665556798 99999999999999888887532        12222232      47999999987


Q ss_pred             hhhHHHH-------HHhcccCCeEEEEEccCCCccccchHH-HhhcCCceEEEE
Q 017201          273 PSLLSEA-------LETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGGRTLKGT  318 (375)
Q Consensus       273 ~~~~~~~-------~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~  318 (375)
                      ++.....       ...+.++ ..++.++.... ....... .+..+++.+...
T Consensus        67 ~~~v~~v~~~~~~~~~~~~~g-~iiid~sT~~p-~~~~~~~~~~~~~g~~~vda  118 (161)
T d1vpda2          67 SPHVKEVALGENGIIEGAKPG-TVLIDMSSIAP-LASREISDALKAKGVEMLDA  118 (161)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTT-CEEEECSCCCH-HHHHHHHHHHHTTTCEEEEC
T ss_pred             HHHHHHHHhCCcchhhccCCC-CEEEECCCCCH-HHHHHHHHHHHHcCCceecc
Confidence            7555543       3455665 66666654432 2222222 233455665543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.0021  Score=54.62  Aligned_cols=80  Identities=18%  Similarity=0.169  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcCC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITHG-  260 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~-  260 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|....   .|-.+  .++..+.+.+.... 
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~--~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            6899999988 9999998888888899 999999998876543    34554332   23222  22333222222211 


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      .++|+++++.|.
T Consensus        87 g~iDilvnnAG~   98 (255)
T d1fmca_          87 GKVDILVNNAGG   98 (255)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEeeeCCcC
Confidence            269999999874

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.58  E-value=0.00053  Score=57.54  Aligned_cols=100  Identities=18%  Similarity=0.203  Sum_probs=68.1

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc--EEeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~--~v~~~~~~~~~~~~~~i~  255 (375)
                      +.+.+.++||++||=+|+|. |..+..+++. ++ +|++++.+++-.+.+++    .+.+  .++..+.   .++     
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~-----   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc---ccc-----
Confidence            56788999999999999974 7778888875 56 89999999887776643    3332  1221111   111     


Q ss_pred             hhcCCCCccEEEEccCC------hhhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .+.++ .||+|+-+-.-      ...+....+.|+|+ |+++...
T Consensus        77 ~~~~~-~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~  119 (234)
T d1xxla_          77 PFPDD-SFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD  119 (234)
T ss_dssp             CSCTT-CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccc-ccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence            12223 79998864432      23688899999997 9888753

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0042  Score=53.19  Aligned_cols=100  Identities=25%  Similarity=0.395  Sum_probs=63.3

Q ss_pred             CCEE-EEECC-CHHHHHHH-HHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE-E--eCCCCCCcccH---HHHHHhh
Q 017201          191 GSSV-AVLGL-GTVGLGAV-DGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSI---SELVKGI  257 (375)
Q Consensus       191 g~~V-lI~Ga-g~~G~~ai-~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~---~~~i~~~  257 (375)
                      |.+| ||+|+ +++|++.+ +|++..|+ +|+.+++++++.+.+    ++.+... +  .|-.+  .++.   .+.+.+.
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~--~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC--HHHHHHHHHHHHHh
Confidence            6778 56688 99999754 57777788 999999999887654    2334322 1  23332  1222   2333332


Q ss_pred             cCCCCccEEEEccCChh-------------------------hHHHHHHhcccCCeEEEEEccC
Q 017201          258 THGMGVDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      . + .+|++|++.|-..                         ..+.++..+++. |+++.++..
T Consensus        79 ~-g-~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS~  139 (275)
T d1wmaa1          79 Y-G-GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSSI  139 (275)
T ss_dssp             H-S-SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCH
T ss_pred             c-C-CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCccccccc
Confidence            2 2 6999999997420                         234456677786 999988753

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.56  E-value=0.00069  Score=58.56  Aligned_cols=102  Identities=15%  Similarity=0.128  Sum_probs=69.7

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i  254 (375)
                      +.....+.+|++||=+|+| .|..+..+++..|+ +|++++.++...+.+++    .|..   .++..+-   .++    
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~---~~l----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc---ccc----
Confidence            3456689999999999997 47778889988898 99999999988776654    3332   1222211   111    


Q ss_pred             HhhcCCCCccEEEEccC-----C-hhhHHHHHHhcccCCeEEEEEcc
Q 017201          255 KGITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                       .. +...||+|+-.-.     . ...+..+.++|+|+ |+++....
T Consensus       130 -~~-~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 -PC-EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             -SS-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -cc-cccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence             11 2236999975332     1 24688999999998 99887653

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.55  E-value=0.0087  Score=51.96  Aligned_cols=80  Identities=23%  Similarity=0.169  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh---------hHHH----hhhcCCcEEeCCCCCCcccHHHHHH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW---------KKEK----GKAFGMTDFINPDDEPNKSISELVK  255 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~---------~~~~----~~~lg~~~v~~~~~~~~~~~~~~i~  255 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.++++.+         +.+.    +...+.....+..+  .++..+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence            5889999998 9999998888889999 8999876532         2221    12334444444443  133333333


Q ss_pred             hhcC-CCCccEEEEccCC
Q 017201          256 GITH-GMGVDYCFECTGV  272 (375)
Q Consensus       256 ~~~~-~~g~d~vid~~g~  272 (375)
                      .... ..++|++|++.|.
T Consensus        83 ~~~~~~G~iDiLVnNAGi  100 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGI  100 (302)
T ss_dssp             HHHHHTSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCcc
Confidence            3221 1269999999874

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.55  E-value=0.0025  Score=53.22  Aligned_cols=94  Identities=14%  Similarity=0.131  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ...++.+||=+|+| .|..+..+++. |+ +|++++.+++-.+.+++.+....+....   .++     ...+ ..||+|
T Consensus        39 ~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~---~~l-----~~~~-~~fD~i  106 (246)
T d2avna1          39 YLKNPCRVLDLGGG-TGKWSLFLQER-GF-EVVLVDPSKEMLEVAREKGVKNVVEAKA---EDL-----PFPS-GAFEAV  106 (246)
T ss_dssp             HCCSCCEEEEETCT-TCHHHHHHHTT-TC-EEEEEESCHHHHHHHHHHTCSCEEECCT---TSC-----CSCT-TCEEEE
T ss_pred             hcCCCCEEEEECCC-Cchhccccccc-ce-EEEEeecccccccccccccccccccccc---ccc-----cccc-ccccce
Confidence            35678899999998 58888888864 88 9999999999999998877655554332   221     1222 379998


Q ss_pred             EEccC------Ch-hhHHHHHHhcccCCeEEEEE
Q 017201          267 FECTG------VP-SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       267 id~~g------~~-~~~~~~~~~l~~~~G~iv~~  293 (375)
                      +....      .+ ..+....++|+++ |.++..
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            86433      21 3577888999997 887654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.52  E-value=0.0063  Score=51.44  Aligned_cols=85  Identities=20%  Similarity=0.253  Sum_probs=54.1

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-------HHhhhcCCcEE---eCCCCCCcccHHHHH
Q 017201          186 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-------EKGKAFGMTDF---INPDDEPNKSISELV  254 (375)
Q Consensus       186 ~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~-------~~~~~lg~~~v---~~~~~~~~~~~~~~i  254 (375)
                      -..+|+.++||+|+ +++|...++.+...|+++|+.+.++..+.       +.+++.|....   .|-.+  ..+..+.+
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d--~~~~~~~~   81 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD--RESVRELL   81 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHH
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch--HHHHHHhh
Confidence            35789999999988 99999877777777886677777654322       22344565432   23333  23333333


Q ss_pred             HhhcCCCCccEEEEccCC
Q 017201          255 KGITHGMGVDYCFECTGV  272 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~  272 (375)
                      ..+......|.++++.|.
T Consensus        82 ~~i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             HTSCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccccc
Confidence            334444468999998874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.51  E-value=0.0049  Score=52.32  Aligned_cols=79  Identities=19%  Similarity=0.224  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHHhhc---
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGIT---  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~~~~---  258 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.+...   ..|-.+  .++..+.+.+..   
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHHh
Confidence            6899999988 9999998888888899 9999999988876542    233222   223333  233333333332   


Q ss_pred             CCCCccEEEEccCC
Q 017201          259 HGMGVDYCFECTGV  272 (375)
Q Consensus       259 ~~~g~d~vid~~g~  272 (375)
                      ++ .+|+++++.|.
T Consensus        84 ~g-~idilvnnAG~   96 (259)
T d1xq1a_          84 GG-KLDILINNLGA   96 (259)
T ss_dssp             TT-CCSEEEEECCC
T ss_pred             CC-Ccccccccccc
Confidence            23 59999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.50  E-value=0.0057  Score=51.72  Aligned_cols=80  Identities=16%  Similarity=0.319  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEe--CCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFI--NPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+.+.++++..+.++    ..+....+  |-.+  .++..+.+.+... 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   83 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ--DEELDALFAGVKEA   83 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCC--HHHHHHHHHHHHHh
Confidence            6899999998 5  799988777778899 8998888766544432    23333333  3222  2333333322211 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        84 ~g~iDilVnnag~   96 (256)
T d1ulua_          84 FGGLDYLVHAIAF   96 (256)
T ss_dssp             HSSEEEEEECCCC
T ss_pred             cCCceEEEecccc
Confidence            1269999998864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.50  E-value=0.013  Score=46.06  Aligned_cols=91  Identities=20%  Similarity=0.248  Sum_probs=64.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|+|+|+|.+|...+..++..|. .+|++.+++++.++.+++.+. +......+    .       .. ....|+|+-|+
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~----~-------~~-~~~~dlIila~   70 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA----K-------VE-DFSPDFVMLSS   70 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG----G-------GG-GTCCSEEEECS
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh----h-------hh-ccccccccccC
Confidence            69999999999988877777774 389999999999999999886 33333221    0       11 12689999998


Q ss_pred             CChh---hHHHHHHhcccCCeEEEEEccC
Q 017201          271 GVPS---LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       271 g~~~---~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .-..   .+......+.++ ..++.++..
T Consensus        71 p~~~~~~vl~~l~~~~~~~-~ii~d~~s~   98 (171)
T d2g5ca2          71 PVRTFREIAKKLSYILSED-ATVTDQGSV   98 (171)
T ss_dssp             CHHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             Cchhhhhhhhhhhcccccc-ccccccccc
Confidence            7542   344556667776 777777654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.47  E-value=0.0024  Score=53.95  Aligned_cols=80  Identities=24%  Similarity=0.246  Sum_probs=52.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhcCCcE--E--eCCCCCCccc---HHHHHHhhcCCC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMTD--F--INPDDEPNKS---ISELVKGITHGM  261 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~---~~~~i~~~~~~~  261 (375)
                      .++|||+|+ +++|.+.++.+...|+. +|+.++++.++.+.+++.....  +  .|-.+  .++   +.+.+.+..+..
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC--HHHHHHHHHHHHHHhCCC
Confidence            378999998 99999877666666753 7999999998887776643211  1  23333  122   233333333344


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      +.|++|++.|.
T Consensus        81 ~idilinnAG~   91 (250)
T d1yo6a1          81 GLSLLINNAGV   91 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CeEEEEEcCcc
Confidence            69999999984

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.46  E-value=0.0041  Score=51.47  Aligned_cols=100  Identities=20%  Similarity=0.220  Sum_probs=68.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVK  255 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~  255 (375)
                      +.+.++++++++||=+|+| .|..+..+++. |+ +|++++.+++-.+.+++    .+...  ++..+.   .++     
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~l-----   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc---ccc-----
Confidence            5577899999999999997 57777777765 66 99999999887776643    34322  222211   111     


Q ss_pred             hhcCCCCccEEEEccC-----Ch-hhHHHHHHhcccCCeEEEEEc
Q 017201          256 GITHGMGVDYCFECTG-----VP-SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g-----~~-~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .+.++ .||+|+-.-.     .+ ..+....++|+|+ |+++...
T Consensus        76 ~~~~~-~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          76 PFTDE-RFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             CSCTT-CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccc-ccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            12223 6999975533     22 4688999999998 9888764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.42  E-value=0.0038  Score=50.15  Aligned_cols=100  Identities=20%  Similarity=0.231  Sum_probs=67.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc-E--EeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-D--FINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~-~--v~~~~~~~~~~~~~~i  254 (375)
                      +....++++|++||=+|+|. |..++.+|+. +. +|++++.+++..+.++    +.|.. .  ++..      +..+..
T Consensus        25 il~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g------da~~~~   95 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG------DAPEAL   95 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES------CHHHHH
T ss_pred             HHHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC------chhhcc
Confidence            34567899999999998863 5566677765 44 9999999998887765    35542 2  2321      222222


Q ss_pred             HhhcCCCCccEEEEccCC---hhhHHHHHHhcccCCeEEEEEc
Q 017201          255 KGITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                         .....+|.|+-....   .+.++.+.+.|+++ |+++...
T Consensus        96 ---~~~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          96 ---CKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             ---TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ---cccCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence               233479998865543   24577888999997 9887664

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.41  E-value=0.0041  Score=52.64  Aligned_cols=82  Identities=16%  Similarity=0.055  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC-cE---EeCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TD---FINPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~-~~---v~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +|++|||+|+ +++|.+.+......|+ +|+++.++.++.+.+.+    .+. ..   ..|-.. +.+++.+.+.+... 
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCC-CHHHHHHHHHHHHHH
Confidence            5899999988 8999987777777899 78888776665544432    221 11   122221 11223332322221 


Q ss_pred             CCCccEEEEccCCh
Q 017201          260 GMGVDYCFECTGVP  273 (375)
Q Consensus       260 ~~g~d~vid~~g~~  273 (375)
                      -.++|++|++.|..
T Consensus        82 ~g~iDilvnnAG~~   95 (254)
T d1sbya1          82 LKTVDILINGAGIL   95 (254)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEeCCCCC
Confidence            12699999999853

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.40  E-value=0.0036  Score=53.26  Aligned_cols=80  Identities=15%  Similarity=0.116  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HhhhcCCcEE---eCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKE----KGKAFGMTDF---INPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~-~~~----~~~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.+    .+++.|.+..   .|-.+  .++..+.+.+... 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            6889999988 9999988887778899 9999998754 332    3345665432   23333  2333333333221 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      -.++|++|++.|.
T Consensus        83 ~G~iDiLVnnAG~   95 (261)
T d1geea_          83 FGKLDVMINNAGL   95 (261)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEeecccee
Confidence            1269999999874

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.39  E-value=0.005  Score=51.12  Aligned_cols=102  Identities=26%  Similarity=0.237  Sum_probs=67.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +...++||++||=+|+|+ |..+..+|+..|. .+|++++.+++..+.+++    .+....+..+.   ... .... ..
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~---~~~-~~~~-~~  140 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TKP-EEYR-AL  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TCG-GGGT-TT
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC---CCc-cccc-cc
Confidence            566899999999999974 8888999998863 389999999988776653    33322222221   111 1111 11


Q ss_pred             CCCCccEEEEccCCh----hhHHHHHHhcccCCeEEEEE
Q 017201          259 HGMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       259 ~~~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  293 (375)
                      . ..+|+++.....+    ..+..+.+.|+++ |+++.+
T Consensus       141 ~-~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 V-PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             C-CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             c-cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            1 2688887665432    2577888999997 987765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.39  E-value=0.00064  Score=57.27  Aligned_cols=76  Identities=14%  Similarity=0.151  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCC-CCccEEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG-MGVDYCF  267 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~-~g~d~vi  267 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+..+    ..|-.+  .++..+.+.+.... .++|++|
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~----~~Dv~~--~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFGV----EVDVTD--SDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEEE----ECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceEE----EEecCC--HHHHHHHHHHHHHhcCCceEEE
Confidence            6889999988 9999998888888999 999999987766543222    223333  12333333322211 2699999


Q ss_pred             EccCC
Q 017201          268 ECTGV  272 (375)
Q Consensus       268 d~~g~  272 (375)
                      ++.|.
T Consensus        79 nnAG~   83 (237)
T d1uzma1          79 SNAGL   83 (237)
T ss_dssp             EECSC
T ss_pred             eeecc
Confidence            99874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.004  Score=52.75  Aligned_cols=81  Identities=19%  Similarity=0.216  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc----CC-cE---EeCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GM-TD---FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g~-~~---v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++    +. ..   ..|-.+  .++..+.+.+...
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHH
Confidence            4889999988 9999998888888999 9999999988866542 21    21 11   123333  2333333333322


Q ss_pred             C-CCccEEEEccCCh
Q 017201          260 G-MGVDYCFECTGVP  273 (375)
Q Consensus       260 ~-~g~d~vid~~g~~  273 (375)
                      . .++|++|++.|..
T Consensus        79 ~~G~iDilVnnAg~~   93 (254)
T d2gdza1          79 HFGRLDILVNNAGVN   93 (254)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HcCCcCeeccccccc
Confidence            1 2699999999853

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.38  E-value=0.007  Score=52.22  Aligned_cols=81  Identities=11%  Similarity=0.017  Sum_probs=53.5

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-----hhcCCcE-E--eCCCCCCcccHHHHHHhhc-
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-----KAFGMTD-F--INPDDEPNKSISELVKGIT-  258 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-----~~lg~~~-v--~~~~~~~~~~~~~~i~~~~-  258 (375)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|... .  .|-.+  .++..+.+.... 
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~   99 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIK   99 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC--hHHHHHHhhhhhh
Confidence            36799999988 9999998888888999 999999998876533     2334432 2  23333  222222222221 


Q ss_pred             CCCCccEEEEccCC
Q 017201          259 HGMGVDYCFECTGV  272 (375)
Q Consensus       259 ~~~g~d~vid~~g~  272 (375)
                      ...++|+++++.|.
T Consensus       100 ~~g~iDilvnnAg~  113 (294)
T d1w6ua_         100 VAGHPNIVINNAAG  113 (294)
T ss_dssp             HTCSCSEEEECCCC
T ss_pred             hccccchhhhhhhh
Confidence            12369999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.36  E-value=0.0031  Score=53.66  Aligned_cols=80  Identities=16%  Similarity=0.202  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-----hhcCCcE---EeCCCCCCcccHHHHHHhhcC-
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-----KAFGMTD---FINPDDEPNKSISELVKGITH-  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-----~~lg~~~---v~~~~~~~~~~~~~~i~~~~~-  259 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     +++|...   ..|-.+  .++..+.+.+... 
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   84 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5789999988 9999998888888999 999999988776433     3345432   223333  2333333333221 


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      ..++|++|++.|.
T Consensus        85 ~g~iDilVnnAg~   97 (260)
T d1h5qa_          85 LGPISGLIANAGV   97 (260)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             hCCCcEecccccc
Confidence            1269999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.35  E-value=0.0046  Score=52.27  Aligned_cols=80  Identities=19%  Similarity=0.229  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCC--c-EE--eCCCCCCcccHHHHHHhhcC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGM--T-DF--INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~--~-~v--~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++.  . ..  .|-.+  .++..+.+.+... -.
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence            5889999988 9999998888888899 8999999988876553 2321  1 12  23333  2233332322221 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus        82 ~iDiLVnnAg~   92 (251)
T d1zk4a1          82 PVSTLVNNAGI   92 (251)
T ss_dssp             SCCEEEECCCC
T ss_pred             CceEEEecccc
Confidence            69999999875

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.35  E-value=0.0045  Score=52.51  Aligned_cols=79  Identities=19%  Similarity=0.178  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hc--CCcE---EeCCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AF--GMTD---FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~l--g~~~---v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.  +...   ..|-.+  .++..+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence            5789999988 9999998888888999 9999999998876542    12  2221   123333  2333333333221


Q ss_pred             C-CCccEEEEccC
Q 017201          260 G-MGVDYCFECTG  271 (375)
Q Consensus       260 ~-~g~d~vid~~g  271 (375)
                      . .++|++|++.|
T Consensus        80 ~~G~iDiLVnnAG   92 (258)
T d1iy8a_          80 RFGRIDGFFNNAG   92 (258)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HhCCCCEEEECCc
Confidence            1 26999999987

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.34  E-value=0.006  Score=51.65  Aligned_cols=79  Identities=15%  Similarity=0.136  Sum_probs=52.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CC
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-GM  261 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~  261 (375)
                      |+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|....   .|-.+  .++..+.+.+... -.
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            677799988 9999998888888899 999999998877654    34454322   23333  2333333333222 12


Q ss_pred             CccEEEEccCC
Q 017201          262 GVDYCFECTGV  272 (375)
Q Consensus       262 g~d~vid~~g~  272 (375)
                      ++|++|++.|.
T Consensus        79 ~iDilVnnAG~   89 (257)
T d2rhca1          79 PVDVLVNNAGR   89 (257)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            69999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.34  E-value=0.0062  Score=51.26  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH--HHhhhcCCcEE---eCCCCCCcccHHHHHHhhcCC-CC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK--EKGKAFGMTDF---INPDDEPNKSISELVKGITHG-MG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~--~~~~~lg~~~v---~~~~~~~~~~~~~~i~~~~~~-~g  262 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.  +.++++|....   .|-.+  .++..+.+.+.... .+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC--HHHHHHHHHHHHHHcCC
Confidence            5789999988 9999999988889999 899999876443  33456665332   23333  23333333332221 26


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|++|++.|.
T Consensus        81 iDilVnnAG~   90 (247)
T d2ew8a1          81 CDILVNNAGI   90 (247)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999875

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0016  Score=54.41  Aligned_cols=97  Identities=14%  Similarity=0.128  Sum_probs=65.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC----cEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----TDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~----~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ..+|.+||-+|+| .|..+..+++..+. +|++++.+++-.+.+++...    ...+..     .+.......+..+ .|
T Consensus        51 ~~~g~~VLdIGcG-~G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~f  122 (229)
T d1zx0a1          51 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK-----GLWEDVAPTLPDG-HF  122 (229)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE-----SCHHHHGGGSCTT-CE
T ss_pred             ccCCCeEEEeecc-chHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc-----ccccccccccccc-cc
Confidence            4689999999997 47888889987666 89999999998888765432    111111     1232233333333 78


Q ss_pred             cEE-EEccCCh----------hhHHHHHHhcccCCeEEEEE
Q 017201          264 DYC-FECTGVP----------SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       264 d~v-id~~g~~----------~~~~~~~~~l~~~~G~iv~~  293 (375)
                      |.+ +|.....          ..+..+.++|+|+ |+++..
T Consensus       123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             cceeecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence            887 4655321          2566788999997 988764

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.30  E-value=0.017  Score=52.05  Aligned_cols=105  Identities=20%  Similarity=0.198  Sum_probs=69.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc---------------CCcEE-eCCCCC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF---------------GMTDF-INPDDE  245 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l---------------g~~~v-~~~~~~  245 (375)
                      +.+..++++|+++|=+|+| +|..+.++|+..|+.+|++++.++...+.+++.               +.... +.... 
T Consensus       208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f-  285 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF-  285 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS-
T ss_pred             HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeech-
Confidence            4577899999999999998 599999999999987899999998777766421               11111 11111 


Q ss_pred             CcccHHHHHHhhcCCCCccEEEEc-cC-Ch---hhHHHHHHhcccCCeEEEEEc
Q 017201          246 PNKSISELVKGITHGMGVDYCFEC-TG-VP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       246 ~~~~~~~~i~~~~~~~g~d~vid~-~g-~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...+......     ..+|+++-. .- .+   ..+.+..+.|++| |+++..-
T Consensus       286 ~~~~~~d~~~-----~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         286 VDNNRVAELI-----PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TTCHHHHHHG-----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hhcccccccc-----ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            1112222111     147887643 21 12   3577888999997 9998754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.29  E-value=0.0045  Score=52.98  Aligned_cols=80  Identities=11%  Similarity=0.166  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC--cE----EeCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--TD----FINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~--~~----v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.+.  ..    ..|-.+  .++..+.+.+..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~   80 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   80 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC--HHHHHHHHHHHH
Confidence            5789999988 9999998888888999 9999999998876543    3332  11    223333  233333333322


Q ss_pred             CC-CCccEEEEccCC
Q 017201          259 HG-MGVDYCFECTGV  272 (375)
Q Consensus       259 ~~-~g~d~vid~~g~  272 (375)
                      .. .++|++|++.|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCceEEEeCCcc
Confidence            21 269999999764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0073  Score=52.32  Aligned_cols=82  Identities=13%  Similarity=0.153  Sum_probs=54.3

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hc--------CCcEE---eCCCCCCcccHHHHH
Q 017201          188 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF--------GMTDF---INPDDEPNKSISELV  254 (375)
Q Consensus       188 ~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l--------g~~~v---~~~~~~~~~~~~~~i  254 (375)
                      .-+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. ++        +....   .|-.+  .++..+.+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~   85 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLV   85 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC--HHHHHHHH
Confidence            457899999988 9999998888888899 9999999988765432 11        22221   23333  23333333


Q ss_pred             HhhcC-CCCccEEEEccCC
Q 017201          255 KGITH-GMGVDYCFECTGV  272 (375)
Q Consensus       255 ~~~~~-~~g~d~vid~~g~  272 (375)
                      .+... -.++|++|++.|.
T Consensus        86 ~~~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHhCCeEEEEeeccc
Confidence            33322 1269999999874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.21  E-value=0.0091  Score=47.15  Aligned_cols=71  Identities=17%  Similarity=0.147  Sum_probs=49.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcC---CcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG---MTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg---~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ..++.+|+|+|+|+.+.+++..+...+ .+|+++.|+.++.+.+. .++   ........+            . .-..+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------~-~~~~~   80 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------I-PLQTY   80 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------C-CCSCC
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhcc------------c-ccccc
Confidence            458889999999999998887777655 59999999998876553 332   211221111            1 12369


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|+|+..
T Consensus        81 diiIN~tp~   89 (171)
T d1p77a1          81 DLVINATSA   89 (171)
T ss_dssp             SEEEECCCC
T ss_pred             ceeeecccc
Confidence            999999864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.20  E-value=0.0037  Score=53.23  Aligned_cols=80  Identities=14%  Similarity=0.137  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc-----E-EeCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-----D-FINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~-----~-v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.+..     . ..|-.+  .++..+.+.+..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence            6788999988 9999998888888899 9999999988876543    33321     1 223333  233333333322


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . -.++|++|++.|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (264)
T d1spxa_          81 GKFGKLDILVNNAGA   95 (264)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHhCCCCEeeccccc
Confidence            1 1269999999873

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.18  E-value=0.013  Score=47.95  Aligned_cols=103  Identities=17%  Similarity=0.025  Sum_probs=67.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ....++||++||=+|+|+ |..+..+++..+..+|++++.+++..+.++    ..+....+..+.   .+.. ...  ..
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~---~~~~-~~~--~~  122 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKPW-KYS--GI  122 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCGG-GTT--TT
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeec---cCcc-ccc--cc
Confidence            356899999999999974 678888888887559999999998877664    344333332222   1110 000  01


Q ss_pred             CCCccEEEEccCCh----hhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      -..+|+++......    ..+..+.+.|+++ |+++..-
T Consensus       123 ~~~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         123 VEKVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            12577776654322    2567788999997 9887663

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.17  E-value=0.0062  Score=52.13  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCC--cE----EeCCCCCCcccHHHHHHhhc
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--TD----FINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~--~~----v~~~~~~~~~~~~~~i~~~~  258 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.+.  ..    ..|-.+  .++..+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC--HHHHHHHHHHHH
Confidence            5889999988 9999998888888899 9999999988876543    3332  11    223333  223333333322


Q ss_pred             CC-CCccEEEEccC
Q 017201          259 HG-MGVDYCFECTG  271 (375)
Q Consensus       259 ~~-~g~d~vid~~g  271 (375)
                      .. ..+|+++++.|
T Consensus        80 ~~~G~iDilVnnAG   93 (274)
T d1xhla_          80 AKFGKIDILVNNAG   93 (274)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCceEEEeecc
Confidence            11 26999999987

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.16  E-value=0.014  Score=45.18  Aligned_cols=94  Identities=24%  Similarity=0.311  Sum_probs=71.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      -+-.|++++|.|=|-+|.-.++-+|.+|+ +|++++.+|-+.-.+.--|.. +.        ...+.+.      ..|++
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~--------~~~~a~~------~aDi~   82 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV--------TLDEIVD------KGDFF   82 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC--------CHHHHTT------TCSEE
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC--------chhHccc------cCcEE
Confidence            35789999999999999999999999999 999999999776555444443 21        2222221      47999


Q ss_pred             EEccCChhh-HHHHHHhcccCCeEEEEEccCC
Q 017201          267 FECTGVPSL-LSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       267 id~~g~~~~-~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      |-++|..+. -.+-++.++++ ..+...|...
T Consensus        83 vTaTGn~~vI~~~h~~~MKdg-aIl~N~GHfd  113 (163)
T d1v8ba1          83 ITCTGNVDVIKLEHLLKMKNN-AVVGNIGHFD  113 (163)
T ss_dssp             EECCSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             EEcCCCCccccHHHHHHhhCC-eEEEeccccc
Confidence            999998764 34678899987 8777777554

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.16  E-value=0.027  Score=43.26  Aligned_cols=81  Identities=16%  Similarity=0.222  Sum_probs=56.1

Q ss_pred             EEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCChhhHHHhhh-cCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGLGTVGLGAVD-GARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~-la~~~G~~~V~~~~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|.++|+|.+|.+.++ |.+..+. +|++.++++++.+.+++ +|... .+..+    ..          ...|+||-++
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l~~~~~~~~-~~~~~----~v----------~~~Div~lav   65 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVET-SATLP----EL----------HSDDVLILAV   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCEE-ESSCC----CC----------CTTSEEEECS
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHhhhhccccc-ccccc----cc----------cccceEEEec
Confidence            6889999999996555 6665446 99999999999887754 66543 33222    11          1479999888


Q ss_pred             CChhhHHHHHHhcccCCeEEE
Q 017201          271 GVPSLLSEALETTKVGKGKVI  291 (375)
Q Consensus       271 g~~~~~~~~~~~l~~~~G~iv  291 (375)
                      - ++.+...++-+++. ++++
T Consensus        66 k-P~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          66 K-PQDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             C-HHHHHHHHTTCCCT-TCEE
T ss_pred             C-HHHHHHhHHHHhhc-ccEE
Confidence            6 44677777777765 4444

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.07  E-value=0.011  Score=49.09  Aligned_cols=101  Identities=19%  Similarity=0.137  Sum_probs=65.7

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      +...++||++||=+|+|. |..+..+|+.....+|++++.+++-.+.+++.    +....+....   .+..    ....
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~---~~~~----~~~~  139 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQ----EYAN  139 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGG----GGTT
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEee---ccCc----cccc
Confidence            566899999999999974 78888888876444999999999887766543    3222232222   1111    1111


Q ss_pred             -CCCccEEEEccCCh----hhHHHHHHhcccCCeEEEEE
Q 017201          260 -GMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       260 -~~g~d~vid~~g~~----~~~~~~~~~l~~~~G~iv~~  293 (375)
                       ...+|+++......    ..+..+.+.|+++ |.++..
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence             12456666655422    2477888999997 987765

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.01  E-value=0.033  Score=43.08  Aligned_cols=94  Identities=17%  Similarity=0.227  Sum_probs=58.3

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHcCCCeEEEEcC-Chh--hHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          192 SSVAVLGLGTVGL-GAVDGARMHGAAKIIGIDK-NPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       192 ~~VlI~Gag~~G~-~ai~la~~~G~~~V~~~~~-~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      =+|.|+|+|.+|. ..+++.+......++++.+ +.+  ...+++++|.....        +..+.+.+.....++|+||
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceeeeeecccccccCEEE
Confidence            3789999999987 5677887765447777754 433  34667788865432        1223333333334799999


Q ss_pred             EccCChhhHHHH--HHhcccCCeEEEEEc
Q 017201          268 ECTGVPSLLSEA--LETTKVGKGKVIVIG  294 (375)
Q Consensus       268 d~~g~~~~~~~~--~~~l~~~~G~iv~~g  294 (375)
                      +++....+.+.+  .+.+..+ -.++...
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G-~~VID~s  104 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPG-IRLIDLT  104 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred             EcCCchhHHHhHHHHHHHHcC-CEEEEcc
Confidence            998765455543  4456664 4555443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.98  E-value=0.0083  Score=50.57  Aligned_cols=75  Identities=17%  Similarity=0.130  Sum_probs=51.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC----CcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+++++    ...+.+..+  .+.+.+.+.+..+  ++|++
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~--~~~~~~~~~~~~G--~iDiL   75 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAYG--QVDVL   75 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHHS--CCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH--HHHHHHHHHHHcC--CCCEE
Confidence            36889988 8999988888888899 9999999888877665432    223444333  2334444444333  59999


Q ss_pred             EEccC
Q 017201          267 FECTG  271 (375)
Q Consensus       267 id~~g  271 (375)
                      |++.|
T Consensus        76 VnNAg   80 (252)
T d1zmta1          76 VSNDI   80 (252)
T ss_dssp             EEECC
T ss_pred             EECCc
Confidence            98765

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.97  E-value=0.012  Score=49.90  Aligned_cols=95  Identities=18%  Similarity=0.132  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC---cEEeCCCCCCcccHHHHHHhhcC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM---TDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~---~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .+++|++||-.|+| +|..++.+|+..++ +|++++.+++..+++++    .+.   ..++..+.          .++..
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~----------~~~~~  171 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN----------RDFPG  171 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT----------TTCCC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch----------HHhcc
Confidence            46899999999774 35555667776445 99999999998887752    233   23443332          12233


Q ss_pred             CCCccEEEEc-c-CChhhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFEC-T-GVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~-~-g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...+|.|+-. . .+...+..+++.++++ |.+..+.
T Consensus       172 ~~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~  207 (260)
T d2frna1         172 ENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHN  207 (260)
T ss_dssp             CSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEe
Confidence            3368876533 2 3445788999999997 8876654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.96  E-value=0.017  Score=48.12  Aligned_cols=97  Identities=24%  Similarity=0.301  Sum_probs=66.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCc-EEeCCCCCCcccHHHHHHh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-DFINPDDEPNKSISELVKG  256 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~-~v~~~~~~~~~~~~~~i~~  256 (375)
                      ++......+..+||=+|+|. |..+..+++ .|+ +|++++.+++-.+.+++.    +.. .++..+          +.+
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d----------~~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD----------VLE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC----------GGG
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh----------hhh
Confidence            34555677888999999985 888888887 577 999999998877777642    322 122221          122


Q ss_pred             hcCCCCccEEEEccCC------h---hhHHHHHHhcccCCeEEEE
Q 017201          257 ITHGMGVDYCFECTGV------P---SLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~------~---~~~~~~~~~l~~~~G~iv~  292 (375)
                      +.....||+|+-..+.      +   ..++.+.++|+|+ |+++.
T Consensus       100 l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            2333479998865432      1   3577899999997 98865

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.91  E-value=0.016  Score=48.91  Aligned_cols=80  Identities=21%  Similarity=0.285  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHh-----hhcCCcEEe---CCCCCCcccHHHHHHhhcC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKG-----KAFGMTDFI---NPDDEPNKSISELVKGITH  259 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~-~~~~~~-----~~lg~~~v~---~~~~~~~~~~~~~i~~~~~  259 (375)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+     .+.|.....   |-.+  .++..+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            6889999988 9999998888888899 999999864 444332     233443322   3222  2333333333221


Q ss_pred             C-CCccEEEEccCC
Q 017201          260 G-MGVDYCFECTGV  272 (375)
Q Consensus       260 ~-~g~d~vid~~g~  272 (375)
                      . .++|++|++.|.
T Consensus        80 ~~G~iDiLVnnAG~   93 (260)
T d1x1ta1          80 QMGRIDILVNNAGI   93 (260)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HhCCCcEEEeeccc
Confidence            1 269999999874

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.91  E-value=0.059  Score=41.70  Aligned_cols=89  Identities=18%  Similarity=0.135  Sum_probs=59.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      .+|.++|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.+....-        +..+.+.      ..|+++-++.
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~--------~~~e~~~------~~diii~~v~   66 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAAR--------SARDAVQ------GADVVISMLP   66 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECS--------SHHHHHT------SCSEEEECCS
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccc--------hhhhhcc------ccCeeeeccc
Confidence            368999999999865555555688 999999999999988888765321        2222221      4788888887


Q ss_pred             ChhhHHHH-------HHhcccCCeEEEEEccC
Q 017201          272 VPSLLSEA-------LETTKVGKGKVIVIGVG  296 (375)
Q Consensus       272 ~~~~~~~~-------~~~l~~~~G~iv~~g~~  296 (375)
                      ..+.....       ...+.++ ..++.++..
T Consensus        67 ~~~~~~~v~~~~~~~~~~l~~g-~iiid~st~   97 (162)
T d3cuma2          67 ASQHVEGLYLDDDGLLAHIAPG-TLVLECSTI   97 (162)
T ss_dssp             CHHHHHHHHHSTTCHHHHSCTT-CEEEECSCC
T ss_pred             chhhHHHHHhccccccccCCCC-CEEEECCCC
Confidence            66544433       3345554 566655544

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0096  Score=49.30  Aligned_cols=106  Identities=10%  Similarity=-0.020  Sum_probs=66.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc-------------EEeCCCCCCccc-
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-------------DFINPDDEPNKS-  249 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~-------------~v~~~~~~~~~~-  249 (375)
                      +...+.++.+||..|+|. |..+..||+ .|+ +|++++.+++-.+.+++....             ....... ...+ 
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~  114 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSS-GNISL  114 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT-SSEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecC-CcEEE
Confidence            455788999999999975 788888886 588 999999999888776542211             0000000 0000 


Q ss_pred             HHHHHHhh--cCCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEEc
Q 017201          250 ISELVKGI--THGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       250 ~~~~i~~~--~~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +...+..+  .....+|+|+++..-        ...+....++|+|+ |+++...
T Consensus       115 ~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~  168 (229)
T d2bzga1         115 YCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCV  168 (229)
T ss_dssp             EESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             EEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEE
Confidence            00001111  122368999987642        13567899999997 9876664

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.84  E-value=0.016  Score=48.81  Aligned_cols=77  Identities=17%  Similarity=0.113  Sum_probs=50.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CCCc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-GMGV  263 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g~  263 (375)
                      .+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+..   .|-.+  .++..+.+.+... -.++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTTCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence            4588888 9999987777777899 999999999887654    34554322   23333  2333333333322 1269


Q ss_pred             cEEEEccCC
Q 017201          264 DYCFECTGV  272 (375)
Q Consensus       264 d~vid~~g~  272 (375)
                      |++|++.|.
T Consensus        80 DilVnnAG~   88 (255)
T d1gega_          80 DVIVNNAGV   88 (255)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEecccc
Confidence            999999874

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.047  Score=47.70  Aligned_cols=104  Identities=19%  Similarity=0.247  Sum_probs=69.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh-----------cCC----cEEeCCCCCC
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----------FGM----TDFINPDDEP  246 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----------lg~----~~v~~~~~~~  246 (375)
                      +.+..+++++++||=+|+| .|..+.++|+..++.++++++.+++..+.+++           +|.    -.++..+- .
T Consensus       143 ~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~-~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-L  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT-T
T ss_pred             HHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc-c
Confidence            4577899999999999997 48888999999998789999999877766542           121    12332221 1


Q ss_pred             cccHHHHHHhhcCCCCccEEEEcc-C-Ch---hhHHHHHHhcccCCeEEEEEc
Q 017201          247 NKSISELVKGITHGMGVDYCFECT-G-VP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~-g-~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +.++.+.+.      .+|+|+-.. . .+   ..+.+.++.|+++ |+++..-
T Consensus       221 ~~~~~~~~~------~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERIA------NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             SHHHHHHHH------HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             ccccccccC------cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            133333322      367876432 1 22   3567788899997 9998764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.69  E-value=0.037  Score=44.54  Aligned_cols=88  Identities=22%  Similarity=0.247  Sum_probs=59.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.++........  .+..    .     .++.+.++      ..|+|+-+
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~-----~~l~~~l~------~sDii~~~  103 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----V-----DSLDDLYK------QADVISLH  103 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----C-----SCHHHHHH------HCSEEEEC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----e-----cccccccc------cccccccc
Confidence            57899999999999999999999999 999998665433221  1211    1     23433333      37888877


Q ss_pred             cCC-hh---hH-HHHHHhcccCCeEEEEEccC
Q 017201          270 TGV-PS---LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g~-~~---~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ... ++   .+ ...+..++++ ..++.++..
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~-a~lIN~sRG  134 (197)
T d1j4aa1         104 VPDVPANVHMINDESIAKMKQD-VVIVNVSRG  134 (197)
T ss_dssp             SCCCGGGTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCccccccccccHHHHhhhCCc-cEEEecCch
Confidence            642 21   12 4677888887 888877633

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.68  E-value=0.024  Score=47.35  Aligned_cols=165  Identities=16%  Similarity=0.116  Sum_probs=89.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhcC-CCC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-GMG  262 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~-~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~~-~~g  262 (375)
                      .|||+|+ +++|.+.++.....|+ +|+..+ +++++.+.+    ++.|....   .|-.+  .++..+.+.+... -.+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHSSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHHHHHHcCC
Confidence            4677788 9999998888888899 887764 455555433    34554322   23333  2333333333222 126


Q ss_pred             ccEEEEccCChh-------------------------hHHHHHHhc--ccCCeEEEEEccCCC-ccc-cchH--------
Q 017201          263 VDYCFECTGVPS-------------------------LLSEALETT--KVGKGKVIVIGVGVD-AMV-PLNV--------  305 (375)
Q Consensus       263 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~~G~iv~~g~~~~-~~~-~~~~--------  305 (375)
                      +|++|++.|...                         ..+.++..+  +.+ |+|+.++.... ... ....        
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaal  158 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC-cEEEEEcChhhcCCCCCCHHHHHHHHHH
Confidence            999999987431                         233455554  344 99999975432 110 0000        


Q ss_pred             --------HHhhcCCceEEEEeeccccC---CCCHHHHHHHHHcCCCCCCcceeeEeecccHHHHHHHHc-CC
Q 017201          306 --------IALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK-QP  366 (375)
Q Consensus       306 --------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~  366 (375)
                              ..+..+++++.....+...+   ....++..+.+.+ .++...    ...-+|+.+++.++. +.
T Consensus       159 ~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~-~~pl~R----~~~p~dvA~~v~fLa~S~  226 (244)
T d1edoa_         159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILG-TIPLGR----TGQPENVAGLVEFLALSP  226 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHT-SCTTCS----CBCHHHHHHHHHHHHHCS
T ss_pred             HHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHh-cCCCCC----CcCHHHHHHHHHHHHCCc
Confidence                    01223678888877665432   1122333343332 222222    223478888888773 44

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.55  E-value=0.004  Score=52.48  Aligned_cols=78  Identities=17%  Similarity=0.263  Sum_probs=48.9

Q ss_pred             CEEEEECC-CHHHHHHHH-HHH--HcCCCeEEEEcCChhhHHHhhhc---CCc-E--EeCCCCCCcccHHH---HHHhhc
Q 017201          192 SSVAVLGL-GTVGLGAVD-GAR--MHGAAKIIGIDKNPWKKEKGKAF---GMT-D--FINPDDEPNKSISE---LVKGIT  258 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~-la~--~~G~~~V~~~~~~~~~~~~~~~l---g~~-~--v~~~~~~~~~~~~~---~i~~~~  258 (375)
                      ++|||+|+ +++|.+.++ |++  ..|+ +|+.+++++++.+.++++   +.. .  ..|-.+  .++..+   .+++..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc--HHHHHHHHhhhHHHh
Confidence            57999998 999997654 444  3577 999999999887655432   221 1  223333  233333   333333


Q ss_pred             CCCCccEEEEccCC
Q 017201          259 HGMGVDYCFECTGV  272 (375)
Q Consensus       259 ~~~g~d~vid~~g~  272 (375)
                      ...++|++|++.|.
T Consensus        80 ~~~~iDiLvnNAg~   93 (248)
T d1snya_          80 KDQGLNVLFNNAGI   93 (248)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             hcCCcceEEeeccc
Confidence            33479999999873

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.55  E-value=0.014  Score=47.27  Aligned_cols=81  Identities=23%  Similarity=0.263  Sum_probs=59.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|+|.|-|.+|..+++++...|+ +|++++.++++......++.+.+ ...     ++       . ....|+.+=
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----~~-------~-~~~~DI~iP   89 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----DV-------L-STPCDVFAP   89 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----GG-------G-GCCCSEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----cc-------c-cccceeeec
Confidence            588999999999999999999999999 99999999999988888887643 111     11       1 126788887


Q ss_pred             ccCChhhHHHHHHhcc
Q 017201          269 CTGVPSLLSEALETTK  284 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~  284 (375)
                      |..+...-......++
T Consensus        90 cA~~~~I~~~~a~~i~  105 (201)
T d1c1da1          90 CAMGGVITTEVARTLD  105 (201)
T ss_dssp             CSCSCCBCHHHHHHCC
T ss_pred             ccccccccHHHHhhhh
Confidence            7654323334444454

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.50  E-value=0.0062  Score=52.56  Aligned_cols=100  Identities=15%  Similarity=0.118  Sum_probs=64.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcE-----EeCCCCCCcccHHHHH
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTD-----FINPDDEPNKSISELV  254 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~-----v~~~~~~~~~~~~~~i  254 (375)
                      ...+.+++.+||=+|+|. |..++.||+. |+ +|++++.+++-++.+++.    +...     .+..     .++...-
T Consensus        50 ~~l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  121 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE-----ANWLTLD  121 (292)
T ss_dssp             HHHHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE-----CCGGGHH
T ss_pred             HHhhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee-----ccccccc
Confidence            344556788999999974 7788888876 88 999999999877766532    2110     1111     1111111


Q ss_pred             HhhcCCCCccEEEEccCCh--------------hhHHHHHHhcccCCeEEEE
Q 017201          255 KGITHGMGVDYCFECTGVP--------------SLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~iv~  292 (375)
                      ........+|.|+.....-              ..+..+.+.|+|+ |.++.
T Consensus       122 ~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         122 KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             HHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             cccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            2233344799998643211              2688999999997 98876

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.49  E-value=0.0059  Score=48.90  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=30.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +++|+|+|+|+.|+.++..++..|++.|+++++++
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            68999999999999999999999985588888664

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.45  E-value=0.04  Score=44.71  Aligned_cols=94  Identities=20%  Similarity=0.249  Sum_probs=62.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc-EEeCCCCCCcccHHHHHHhhcCCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      -++++++||-+|+|. |..+..+++. |+ +|++++.+++-.+.+++    .+.. ..+..+.   .++     .. ...
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~---~~l-----~~-~~~  101 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKL-----SF-EDK  101 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSC-----CS-CTT
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhcccccccccccccc---ccc-----cc-cCc
Confidence            357889999999975 7788888875 77 99999999988877753    3321 1221111   111     11 223


Q ss_pred             CccEEEEccCC-----h---hhHHHHHHhcccCCeEEEEE
Q 017201          262 GVDYCFECTGV-----P---SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       262 g~d~vid~~g~-----~---~~~~~~~~~l~~~~G~iv~~  293 (375)
                      .+|+|+-...-     .   ..+....++|+|+ |+++..
T Consensus       102 ~fD~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         102 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CceEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            79998754431     1   2577899999997 987654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.40  E-value=0.014  Score=42.79  Aligned_cols=67  Identities=7%  Similarity=0.140  Sum_probs=45.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .++..++|+|+|+|.+|+-.+..++.+|. +|+.+.+.+. .  ++         .-+   +++.+.+.+.....|+++.
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~~-i--l~---------~~d---~~~~~~~~~~l~~~gV~i~   81 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGNR-I--LR---------KFD---ESVINVLENDMKKNNINIV   81 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSS-S--CT---------TSC---HHHHHHHHHHHHHTTCEEE
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhcc-c--cc---------ccc---HHHHHHHHHHHHhCCCEEE
Confidence            45557899999999999998899999998 9999986542 1  11         111   4555555554444467766


Q ss_pred             EEc
Q 017201          267 FEC  269 (375)
Q Consensus       267 id~  269 (375)
                      .++
T Consensus        82 ~~~   84 (117)
T d1onfa2          82 TFA   84 (117)
T ss_dssp             CSC
T ss_pred             ECC
Confidence            554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.40  E-value=0.022  Score=48.28  Aligned_cols=81  Identities=11%  Similarity=0.189  Sum_probs=51.0

Q ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh---h-cCCcEE--eCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK---A-FGMTDF--INPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~---~-lg~~~v--~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -+|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++   + .+...+  .+..+  +.+..+.+.+...
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK--EEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccc--hhhHHHHHHHHHH
Confidence            46899999986 5  699998888889999 9999998865443333   2 222222  22222  2333333333222


Q ss_pred             -CCCccEEEEccCC
Q 017201          260 -GMGVDYCFECTGV  272 (375)
Q Consensus       260 -~~g~d~vid~~g~  272 (375)
                       -..+|+++.+.+.
T Consensus        80 ~~g~id~lV~nag~   93 (274)
T d2pd4a1          80 DLGSLDFIVHSVAF   93 (274)
T ss_dssp             HTSCEEEEEECCCC
T ss_pred             HcCCCCeEEeeccc
Confidence             1269999988874

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.34  E-value=0.023  Score=49.63  Aligned_cols=102  Identities=27%  Similarity=0.265  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc---EEeCCCCCCcccHHHHHHhhc-
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGIT-  258 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~---~v~~~~~~~~~~~~~~i~~~~-  258 (375)
                      .+++|++||=.++|. |..++.+|+. |+.+|++++.+++..+.+++    .|..   .++.      .+..+.+..+. 
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~------~d~~~~~~~~~~  213 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV------GSAFEEMEKLQK  213 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHHHH
T ss_pred             hcCCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee------chhhhhhHHHHh
Confidence            468899999887632 3344444544 67699999999998888753    3442   2222      23333333322 


Q ss_pred             CCCCccEEEEccC-C--------------hhhHHHHHHhcccCCeEEEEEccCC
Q 017201          259 HGMGVDYCFECTG-V--------------PSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       259 ~~~g~d~vid~~g-~--------------~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .+..||+|+--.. .              ...+..++++|+|+ |.++.+..+.
T Consensus       214 ~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s~  266 (324)
T d2as0a2         214 KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCSQ  266 (324)
T ss_dssp             TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECCT
T ss_pred             ccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCCc
Confidence            3447999875322 1              12467788999997 9998886554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.27  E-value=0.018  Score=44.63  Aligned_cols=88  Identities=15%  Similarity=0.163  Sum_probs=55.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-----EeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-----FINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-----v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.....+.+.     .+....      .+.+      ..+|++|
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------~~~D~ii   68 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAND------PDFL------ATSDLLL   68 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESC------HHHH------HTCSEEE
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccch------hhhh------cccceEE
Confidence            79999999999876666667888 9999999887765544333211     111111      1111      1699999


Q ss_pred             EccCChh---hHHHHHHhcccCCeEEEEEc
Q 017201          268 ECTGVPS---LLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       268 d~~g~~~---~~~~~~~~l~~~~G~iv~~g  294 (375)
                      -++-..+   .++.....+.++ ..++.+.
T Consensus        69 i~vka~~~~~~~~~l~~~~~~~-~~Iv~~q   97 (167)
T d1ks9a2          69 VTLKAWQVSDAVKSLASTLPVT-TPILLIH   97 (167)
T ss_dssp             ECSCGGGHHHHHHHHHTTSCTT-SCEEEEC
T ss_pred             EeecccchHHHHHhhccccCcc-cEEeecc
Confidence            9997652   233333444554 5666654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.27  E-value=0.013  Score=42.61  Aligned_cols=40  Identities=20%  Similarity=0.342  Sum_probs=33.8

Q ss_pred             CCCCCC-EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017201          187 KVEKGS-SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK  227 (375)
Q Consensus       187 ~~~~g~-~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~  227 (375)
                      .+.|+. +|.|+|+|.+|.+.++-|+.+|+ ++++.+.+++.
T Consensus         6 ~~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2           6 ALRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             TTSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            345554 69999999999999999999999 99999977654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.013  Score=46.63  Aligned_cols=38  Identities=24%  Similarity=0.353  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ....+++|+|+|+|+.|+.|+..+...|. +|+..+.++
T Consensus        39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            45567899999999999999999999999 999999754

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.22  E-value=0.038  Score=45.01  Aligned_cols=72  Identities=21%  Similarity=0.188  Sum_probs=46.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      .+|||+|+ |.+|...++.+...|.. .|+.+.+++++.+.+.. +...+. |..+     .. .+.+...  ++|.|++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~~d~~~-----~~-~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFIGDITD-----AD-SINPAFQ--GIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEECCTTS-----HH-HHHHHHT--TCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEEeeecc-----cc-ccccccc--cceeeEE
Confidence            48999998 99999998888888852 57777788877665432 333322 2222     21 2222222  5899998


Q ss_pred             ccCC
Q 017201          269 CTGV  272 (375)
Q Consensus       269 ~~g~  272 (375)
                      +.+.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            8753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.06  E-value=0.068  Score=40.89  Aligned_cols=85  Identities=14%  Similarity=0.277  Sum_probs=60.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|.++|+|.+|.+.+.-....|. ++++.++++++.+.+ +++|...+.        +..+.+.      ..|+||-++-
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~--------~~~~~~~------~~dvIilavk   66 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM--------SHQDLID------QVDLVILGIK   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS--------SHHHHHH------TCSEEEECSC
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec--------hhhhhhh------ccceeeeecc
Confidence            58899999999976664455677 899999998887765 567765321        2222222      5899999985


Q ss_pred             ChhhHHHHHHhcccCCeEEEEEc
Q 017201          272 VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       272 ~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       ++.+...+..+.++ ..++.+.
T Consensus        67 -p~~~~~vl~~l~~~-~~iis~~   87 (152)
T d2ahra2          67 -PQLFETVLKPLHFK-QPIISMA   87 (152)
T ss_dssp             -GGGHHHHHTTSCCC-SCEEECC
T ss_pred             -hHhHHHHhhhcccc-eeEeccc
Confidence             44778888888886 6666553

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.05  E-value=0.027  Score=45.18  Aligned_cols=93  Identities=22%  Similarity=0.282  Sum_probs=60.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE-eCCCCCCcccHHHHHHhhcCCCCcc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF-INPDDEPNKSISELVKGITHGMGVD  264 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d  264 (375)
                      ++.+||-+|+| .|..+..+++. |+ +|++++.+++-++.++    +.+.+.+ +...+         +.++.....||
T Consensus        30 ~~grvLDiGcG-~G~~~~~la~~-g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d---------~~~~~~~~~fD   97 (198)
T d2i6ga1          30 APGRTLDLGCG-NGRNSLYLAAN-GY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVD---------LNTLTFDGEYD   97 (198)
T ss_dssp             CSCEEEEETCT-TSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC---------TTTCCCCCCEE
T ss_pred             CCCcEEEECCC-CCHHHHHHHHH-hh-hhccccCcHHHHHHHHHHhhhccccchhhhhee---------ccccccccccc
Confidence            34489999997 68888888764 78 9999999998887664    3344321 11111         01111223699


Q ss_pred             EEEEccCC-----h---hhHHHHHHhcccCCeEEEEEcc
Q 017201          265 YCFECTGV-----P---SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       265 ~vid~~g~-----~---~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +|+....-     +   ..+..+.++|+++ |.++....
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          98 FILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             EEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            99864321     1   3677888899997 98887643

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.03  E-value=0.06  Score=44.68  Aligned_cols=78  Identities=15%  Similarity=0.085  Sum_probs=48.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCC------eEEEEcCChhhHHHh----hhcCCcEE---eCCCCCCcccHHHHHHhhc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAA------KIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGIT  258 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~------~V~~~~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~~i~~~~  258 (375)
                      .|||+|+ +++|.+.++.+...|++      .|+.+++++++++.+    ++.|....   .|-.+  .++..+.+.+..
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTHIV   80 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence            3678888 99999877777777873      288899998887654    33454321   23333  233333333322


Q ss_pred             C-CCCccEEEEccCC
Q 017201          259 H-GMGVDYCFECTGV  272 (375)
Q Consensus       259 ~-~~g~d~vid~~g~  272 (375)
                      . -..+|++|++.|.
T Consensus        81 ~~~g~iDilvnnAg~   95 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGV   95 (240)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HHcCCcceeeccccc
Confidence            1 1269999999874

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.02  E-value=0.12  Score=40.30  Aligned_cols=100  Identities=22%  Similarity=0.246  Sum_probs=63.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcC-C-hhhHHHhhhcCCcEEeCCCCCCcccHHHHHHh-hc-C------CCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDK-N-PWKKEKGKAFGMTDFINPDDEPNKSISELVKG-IT-H------GMG  262 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~-~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~-~~-~------~~g  262 (375)
                      +|.|.|-|-+|...++.+....--.++++.. + .+....+..++.+......+    ........ .. .      -.+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEE----FIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGG----GHHHHHHHTCCCSCBHHHHHTT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeeccccc----ceeeecccCccccchhhhhhcc
Confidence            6899999999998888776543226666653 2 23345566666554332211    11111110 00 0      127


Q ss_pred             ccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          263 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +|+|+||+|.-...+.+-..+..+ .+.+.++.+.
T Consensus        80 vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~  113 (172)
T d2czca2          80 VDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEK  113 (172)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSC
T ss_pred             CCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            999999999776677888888887 8888888764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.019  Score=48.04  Aligned_cols=47  Identities=23%  Similarity=0.247  Sum_probs=38.9

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh-hhcCC
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM  236 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~  236 (375)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC
Confidence            37899999988 9999998888888999 899999998877654 44554

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.95  E-value=0.028  Score=41.17  Aligned_cols=43  Identities=19%  Similarity=0.148  Sum_probs=36.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +.+.....++++|+|+|+|.+|+-.+..++..|. +|+.+.+++
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            3455677889999999999999988888889998 899998764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.95  E-value=0.025  Score=41.29  Aligned_cols=65  Identities=17%  Similarity=0.179  Sum_probs=44.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      ..++++|+|+|.+|+-+++.+..+|. +|+.+.+.+.=+   .         .-+   .+..+.+.+....+|+++.+++
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~il---~---------~~d---~~~~~~l~~~l~~~GI~i~~~~   84 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGEIL---S---------GFE---KQMAAIIKKRLKKKGVEVVTNA   84 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSSS---T---------TSC---HHHHHHHHHHHHHTTCEEEESE
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecceec---c---------ccc---chhHHHHHHHHHhcCCEEEcCC
Confidence            34799999999999999999999998 999998654311   1         111   3455555554444477777654


Q ss_pred             c
Q 017201          270 T  270 (375)
Q Consensus       270 ~  270 (375)
                      .
T Consensus        85 ~   85 (117)
T d1ebda2          85 L   85 (117)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.90  E-value=0.094  Score=41.06  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=35.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      .+|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            478899999999865555556788 89999999999887765443

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.89  E-value=0.061  Score=42.90  Aligned_cols=98  Identities=16%  Similarity=0.112  Sum_probs=63.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCC--c--EEeCCCCCCcccHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM--T--DFINPDDEPNKSISEL  253 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~--~--~v~~~~~~~~~~~~~~  253 (375)
                      +.+.....++++||=+|+|. |..++.+++ .+. +|++++.+++..+.+++    .+.  .  .++..+.         
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~---------  111 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---------  111 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---------
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcch---------
Confidence            45677889999999998863 666666665 355 99999999888777753    222  1  1222211         


Q ss_pred             HHhhcCCCCccEEEEccC---Ch----hhHHHHHHhcccCCeEEEEE
Q 017201          254 VKGITHGMGVDYCFECTG---VP----SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       254 i~~~~~~~g~d~vid~~g---~~----~~~~~~~~~l~~~~G~iv~~  293 (375)
                       .+......||+|+-...   +.    ..++.+.+.|+++ |+++..
T Consensus       112 -~~~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         112 -YENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             -TTTCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             -hhhhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence             11112347999986432   22    2477888999997 987654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.055  Score=45.19  Aligned_cols=83  Identities=17%  Similarity=0.191  Sum_probs=50.8

Q ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhc-CC
Q 017201          189 EKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGIT-HG  260 (375)
Q Consensus       189 ~~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~-~~  260 (375)
                      -+|+++||+|+ |  ++|.+.+..+...|+ +|+.+.++++..+.+.    ..+....+.....+..+......+.. ..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            47899999987 6  688888888888899 8999998876655443    23433332222111122333333322 22


Q ss_pred             CCccEEEEccCC
Q 017201          261 MGVDYCFECTGV  272 (375)
Q Consensus       261 ~g~d~vid~~g~  272 (375)
                      ...|+.+++.+.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            368999988753

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.83  E-value=0.051  Score=44.70  Aligned_cols=106  Identities=17%  Similarity=0.170  Sum_probs=68.3

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhhc
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...+.....+||-+|.+ +|..++.+|+.+. -.+|+.++.+++..+.+++    .|...-+.-..   .+..+.+.++.
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~---g~a~~~L~~l~  128 (227)
T d1susa1          53 MLLKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMI  128 (227)
T ss_dssp             HHHHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHH
T ss_pred             HHHHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee---hHHHHHHHHHH
Confidence            34455677899999885 5888889998874 2399999999988877753    45533111111   12333343331


Q ss_pred             ----CCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEc
Q 017201          259 ----HGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ----~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                          ....||.||--....   ..++.++.+++++ |.++.=.
T Consensus       129 ~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN  170 (227)
T d1susa1         129 KDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  170 (227)
T ss_dssp             HCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred             hccccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence                123699986443322   4688999999997 8776543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.79  E-value=0.023  Score=41.90  Aligned_cols=64  Identities=17%  Similarity=0.294  Sum_probs=44.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      ..++++|+|+|.+|+=.++++..+|. +|+.+.+++.=   +.         .-+   ++..+.+.+.....|+++.+++
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~~~---l~---------~~d---~ei~~~l~~~l~~~GV~i~~~~   85 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQI---GA---------SMD---GEVAKATQKFLKKQGLDFKLST   85 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS---SS---------SSC---HHHHHHHHHHHHHTTCEEECSE
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecccc---ch---------hhh---hhhHHHHHHHHHhccceEEeCC
Confidence            34799999999999999999999999 99999865431   11         111   4555555554444467776654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.78  E-value=0.2  Score=38.01  Aligned_cols=90  Identities=20%  Similarity=0.219  Sum_probs=59.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCChhh--H-HHhhhcCCcEEeCCCCCCcccHHHHHHhhcC------
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWK--K-EKGKAFGMTDFINPDDEPNKSISELVKGITH------  259 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~~~~~~--~-~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~------  259 (375)
                      .+|.|+|+ |.+|..+.++.+..  .+ +|++++-...-  + +.+++|.+..++-.++   +. .+.+.....      
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~---~~-~~~l~~~~~~~~~~v   77 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP---SL-YNDLKEALAGSSVEA   77 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG---GG-HHHHHHHTTTCSSEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH---HH-HHHHHHHhhhccccc
Confidence            78999999 99999999999976  46 77777654332  2 3456788877654433   11 112211111      


Q ss_pred             -----------CCCccEEEEccCChhhHHHHHHhcccC
Q 017201          260 -----------GMGVDYCFECTGVPSLLSEALETTKVG  286 (375)
Q Consensus       260 -----------~~g~d~vid~~g~~~~~~~~~~~l~~~  286 (375)
                                 ...+|+++.+..+-..+...+..++.+
T Consensus        78 ~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g  115 (150)
T d1r0ka2          78 AAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG  115 (150)
T ss_dssp             EESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT
T ss_pred             ccCccchheecccccceeeeecCchhHHHHHHHHHhcC
Confidence                       125788888876666778888888775

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.78  E-value=0.079  Score=42.32  Aligned_cols=91  Identities=18%  Similarity=0.264  Sum_probs=60.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...+++++.+|+ +|++.++..... .....+...+        .++.+-++      ..|+|+-
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~--------~~l~~ll~------~sD~i~~  110 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF------HSDCVTL  110 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH------HCSEEEE
T ss_pred             eeCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc--------cchhhccc------cCCEEEE
Confidence            478899999999999999999999999 999998764432 2223343221        23333332      3688766


Q ss_pred             ccC-Chhh----HHHHHHhcccCCeEEEEEccC
Q 017201          269 CTG-VPSL----LSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g-~~~~----~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.. ++++    -...+..++++ ..++.++..
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~-a~lIN~sRG  142 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQG-AFLVNTARG  142 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTT-EEEEECSCT
T ss_pred             eecccccchhhhhHHHHhccCCC-CeEEecCCc
Confidence            654 2211    23567888887 888777643

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.71  E-value=0.095  Score=41.76  Aligned_cols=91  Identities=14%  Similarity=0.220  Sum_probs=60.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.++.|+|.|.+|...+++++.+|. +|+..++...........+...   .     .++.+.+.      ..|+|+.+
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~-----~~l~~ll~------~sD~v~l~  110 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H-----DSLDSLLS------VSQFFSLN  110 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C-----SSHHHHHH------HCSEEEEC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c-----CCHHHHHh------hCCeEEec
Confidence            58999999999999999999999999 9999987655443333333221   1     23433333      36888766


Q ss_pred             cC-Chh---h-HHHHHHhcccCCeEEEEEccC
Q 017201          270 TG-VPS---L-LSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g-~~~---~-~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .. +++   . -...+..++++ ..++.++..
T Consensus       111 ~plt~~T~~li~~~~l~~mk~~-a~lIN~sRG  141 (191)
T d1gdha1         111 APSTPETRYFFNKATIKSLPQG-AIVVNTARG  141 (191)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             CCCCchHhheecHHHhhCcCCc-cEEEecCCc
Confidence            53 221   1 23677888887 888877633

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.71  E-value=0.023  Score=41.45  Aligned_cols=35  Identities=26%  Similarity=0.159  Sum_probs=30.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      .++|+|+|+|.+|+-+++.++.+|. +|+.+.+.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            4789999999999999999999998 9999987643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.67  E-value=0.17  Score=38.26  Aligned_cols=91  Identities=13%  Similarity=0.082  Sum_probs=57.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCC-CccEEEEc
Q 017201          192 SSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM-GVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~G-ag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~-g~d~vid~  269 (375)
                      ++|+|+| .|.+|...+..++..|+ .|.+.+++++........+++.++....  .......+.+..+.. .=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP--INLTLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc--hhhheeeeecccccccCCceEEEe
Confidence            5899999 59999998888888999 9999998877666555556666554433  133333333333221 12477888


Q ss_pred             cCChhhHHHHHHhccc
Q 017201          270 TGVPSLLSEALETTKV  285 (375)
Q Consensus       270 ~g~~~~~~~~~~~l~~  285 (375)
                      .+....+...+....+
T Consensus        87 ~Svk~~~~~~~~~~~~  102 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT  102 (152)
T ss_dssp             CSCCHHHHHHHHHHCS
T ss_pred             cccCHHHHHHHHHHcc
Confidence            7654333343433333

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.62  E-value=0.016  Score=49.19  Aligned_cols=34  Identities=29%  Similarity=0.502  Sum_probs=30.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      |++|+|+|+|+.|++|+..++..|. +|++++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5789999999999999888888999 999998653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.61  E-value=0.039  Score=40.66  Aligned_cols=72  Identities=18%  Similarity=0.200  Sum_probs=47.8

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      .+...-.++.+|+|+|+|.+|+-+++.+...|. +|+.+.+.+.=+      +.     .-+   ++..+.+.+.....|
T Consensus        22 ~~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~~~l------~~-----~~d---~~~~~~~~~~l~~~g   86 (123)
T d1nhpa2          22 KQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDRPL------GV-----YLD---KEFTDVLTEEMEANN   86 (123)
T ss_dssp             HHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSTT------TT-----TCC---HHHHHHHHHHHHTTT
T ss_pred             HHHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecCccc------cc-----ccc---hhhHHHHHHHhhcCC
Confidence            344444567899999999999998899999998 899998654211      10     001   445555555444446


Q ss_pred             ccEEEEc
Q 017201          263 VDYCFEC  269 (375)
Q Consensus       263 ~d~vid~  269 (375)
                      +++..++
T Consensus        87 v~~~~~~   93 (123)
T d1nhpa2          87 ITIATGE   93 (123)
T ss_dssp             EEEEESC
T ss_pred             eEEEeCc
Confidence            7776654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.60  E-value=0.17  Score=38.47  Aligned_cols=90  Identities=17%  Similarity=0.198  Sum_probs=59.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCChhh--H-HHhhhcCCcEEeCCCCCCcccH---HH-----------
Q 017201          193 SVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWK--K-EKGKAFGMTDFINPDDEPNKSI---SE-----------  252 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~~~~~~--~-~~~~~lg~~~v~~~~~~~~~~~---~~-----------  252 (375)
                      +|.|+|+ |.+|..++.+.+..  .+ +|++.+-+..-  + +.+++|.+..++..++   +..   ..           
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~---~~~~~l~~~l~~~~~~~~~   78 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE---ASAKLLKTMLQQQGSRTEV   78 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH---HHHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH---HHHHHHHHHhhhhcccccc
Confidence            6899999 99999999999987  35 67766644332  2 3356788877665443   221   11           


Q ss_pred             -----HHHhhcCCCCccEEEEccCChhhHHHHHHhcccC
Q 017201          253 -----LVKGITHGMGVDYCFECTGVPSLLSEALETTKVG  286 (375)
Q Consensus       253 -----~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~  286 (375)
                           .+.++....++|+|+.+..+-..+...+..++.+
T Consensus        79 ~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g  117 (151)
T d1q0qa2          79 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG  117 (151)
T ss_dssp             EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT
T ss_pred             ccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC
Confidence                 1122222336888888887766788888888875

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.60  E-value=0.015  Score=39.13  Aligned_cols=36  Identities=19%  Similarity=0.212  Sum_probs=31.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      ++|.|+|+|.+|.|.++-|+.+|. ++.+.+.+++-.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~p   37 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCGG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCCc
Confidence            478999999999999999999999 899998765443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.58  E-value=0.02  Score=47.76  Aligned_cols=35  Identities=26%  Similarity=0.303  Sum_probs=30.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ..++|+|+|+|+.|++++..++..|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            35789999999999998888888899 999999754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.57  E-value=0.025  Score=46.65  Aligned_cols=48  Identities=27%  Similarity=0.298  Sum_probs=41.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh-hcCCc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT  237 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg~~  237 (375)
                      -.|.+|+|.|-|.+|..+++++...|+ +|++++.++.+.+.+. ..|..
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            578999999999999999999999999 9999999888876654 34543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.56  E-value=0.1  Score=36.44  Aligned_cols=72  Identities=15%  Similarity=0.269  Sum_probs=51.0

Q ss_pred             CCCCCEEEEECCCHHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          188 VEKGSSVAVLGLGTVGLGA-VDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~a-i~la~~~G~~~V~~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      .+..+++.++|.|++|..+ +++++..|+ +|...+... ...+.+++.|......+..   +..          .+.|.
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~---~~i----------~~~d~   70 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE---EHI----------EGASV   70 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG---GGG----------TTCSE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc---ccC----------CCCCE
Confidence            4566889999998889876 899999999 999999763 3345566788865443332   111          25788


Q ss_pred             EEEccCCh
Q 017201          266 CFECTGVP  273 (375)
Q Consensus       266 vid~~g~~  273 (375)
                      |+-+.+-+
T Consensus        71 vV~S~AI~   78 (96)
T d1p3da1          71 VVVSSAIK   78 (96)
T ss_dssp             EEECTTSC
T ss_pred             EEECCCcC
Confidence            88776643

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.55  E-value=0.035  Score=40.69  Aligned_cols=36  Identities=19%  Similarity=0.261  Sum_probs=31.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +..++++|+|+|.+|+=.+++.+.+|. +|+.+..++
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            345889999999999999999999998 899998653

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.49  E-value=0.037  Score=45.95  Aligned_cols=90  Identities=13%  Similarity=0.083  Sum_probs=59.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc-EEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~-~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      .++++||=+|+| .|..+..+++. |. +|++++.+++-++.+++    .+.. .++.. +         +..+.....|
T Consensus        36 ~~~~~vLDiGCG-~G~~~~~l~~~-g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~-d---------~~~~~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACG-TGNLTENLCPK-FK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQ-D---------ISNLNINRKF  102 (246)
T ss_dssp             CCTTEEEEETCT-TSTTHHHHGGG-SS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECC-C---------GGGCCCSCCE
T ss_pred             CCCCeEEEEeCc-CCHHHHHHHHh-CC-ccEeeccchhhhhhccccccccCccceeecc-c---------hhhhcccccc
Confidence            456799999997 37777777764 77 99999999987776653    3322 23322 1         1223323479


Q ss_pred             cEEEEccCC------h----hhHHHHHHhcccCCeEEEE
Q 017201          264 DYCFECTGV------P----SLLSEALETTKVGKGKVIV  292 (375)
Q Consensus       264 d~vid~~g~------~----~~~~~~~~~l~~~~G~iv~  292 (375)
                      |+|+...+.      .    ..++.+.++|+|+ |.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            999854321      1    2577899999997 98774

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.45  E-value=0.1  Score=40.40  Aligned_cols=133  Identities=12%  Similarity=0.059  Sum_probs=78.2

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcCCCeEEEEcCChhhHHHh-hhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGLGTVGLG-AVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Gag~~G~~-ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|.|+|+|.+|.- .+...+..+...++++++++++.+.+ ++++...+++..+    +       +.. .++|.|+-++
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~-------ll~-~~iD~V~I~t   70 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYR----D-------VLQ-YGVDAVMIHA   70 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTT----G-------GGG-GCCSEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHH----H-------hcc-cccceecccc
Confidence            6889999999964 55566555333778888888777655 4577654433221    1       112 2699999999


Q ss_pred             CChhhHHHHHHhcccCCeEEEEEccCCCc--cccchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          271 GVPSLLSEALETTKVGKGKVIVIGVGVDA--MVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       271 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      ....+.+.+..++..+  +=+.+..+...  ........+ -.+++.+.-.+  + ++...+.++++.+..|++.
T Consensus        71 p~~~H~~~~~~al~~g--k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~--~-r~~~~~~~~~~~~~~G~ig  140 (167)
T d1xeaa1          71 ATDVHSTLAAFFLHLG--IPTFVDKPLAASAQECENLYELAEKHHQPLYVGF--N-GFDAMVQDWLQVAAAGKLP  140 (167)
T ss_dssp             CGGGHHHHHHHHHHTT--CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC--G-THHHHHHHHHHHHHHTCCC
T ss_pred             cccccccccccccccc--cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe--C-cCCHHHHHHHHHhhcCCCC
Confidence            8887888899988875  44666555421  111112222 22444443221  1 1122345677777777764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.075  Score=45.86  Aligned_cols=42  Identities=26%  Similarity=0.444  Sum_probs=31.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK  227 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~  227 (375)
                      +.....+|++||-+|+| .|.+++.+|+ .|+++|++++.++.-
T Consensus        29 ~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~   70 (311)
T d2fyta1          29 QNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEIL   70 (311)
T ss_dssp             HCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHH
T ss_pred             hccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHH
Confidence            34466789999999987 5667666665 477799999988753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.37  E-value=0.13  Score=35.25  Aligned_cols=67  Identities=15%  Similarity=0.285  Sum_probs=47.8

Q ss_pred             CEEEEECCCHHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGLGTVGLGA-VDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Gag~~G~~a-i~la~~~G~~~V~~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .+|-++|.|++|..+ +++++..|+ .|.+.+..+ +..+.++++|+......+.   +++          .+.|+|+-+
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~---~~i----------~~~d~vV~S   67 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA---DNW----------YDPDLVIKT   67 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT---TSC----------CCCSEEEEC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc---ccc----------CCCCEEEEe
Confidence            467788998889854 688999999 999999876 4446688899875443322   222          268998877


Q ss_pred             cCC
Q 017201          270 TGV  272 (375)
Q Consensus       270 ~g~  272 (375)
                      ..-
T Consensus        68 sAI   70 (89)
T d1j6ua1          68 PAV   70 (89)
T ss_dssp             TTC
T ss_pred             cCc
Confidence            653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.37  E-value=0.046  Score=40.13  Aligned_cols=68  Identities=22%  Similarity=0.382  Sum_probs=47.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .++++++++|+|+|.+|.=.+..++..|. +|+.+.+++.=+.  +         .-+   +...+.+.+....+|+++.
T Consensus        26 ~~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~~l~--~---------~~~---~~~~~~~~~~l~~~GV~i~   90 (121)
T d1d7ya2          26 GLRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPRLMS--R---------AAP---ATLADFVARYHAAQGVDLR   90 (121)
T ss_dssp             HCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSTTT--T---------TSC---HHHHHHHHHHHHTTTCEEE
T ss_pred             hhhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeecccccc--c---------cCC---HHHHHHHHHHHHHCCcEEE
Confidence            45678999999999999988888888898 9999987654211  0         011   4555555555445577777


Q ss_pred             EEc
Q 017201          267 FEC  269 (375)
Q Consensus       267 id~  269 (375)
                      .++
T Consensus        91 ~~~   93 (121)
T d1d7ya2          91 FER   93 (121)
T ss_dssp             ESC
T ss_pred             eCC
Confidence            654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.36  E-value=0.025  Score=41.78  Aligned_cols=65  Identities=15%  Similarity=0.169  Sum_probs=45.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +..++++|+|+|.+|+=.+++.+.+|. +|+.+.+++.-+.            .-+   .+....+.+.....|+++..+
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~~l~------------~~d---~~~~~~l~~~l~~~GI~i~~~   86 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASEIVP------------TMD---AEIRKQFQRSLEKQGMKFKLK   86 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSSSST------------TSC---HHHHHHHHHHHHHSSCCEECS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccccCc------------hhh---hcchhhhhhhhhcccceEEcC
Confidence            446899999999999999999999998 9999987654321            111   345555555444446777665


Q ss_pred             c
Q 017201          269 C  269 (375)
Q Consensus       269 ~  269 (375)
                      +
T Consensus        87 ~   87 (123)
T d1dxla2          87 T   87 (123)
T ss_dssp             E
T ss_pred             C
Confidence            4

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.35  E-value=0.034  Score=48.72  Aligned_cols=48  Identities=29%  Similarity=0.315  Sum_probs=39.1

Q ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh
Q 017201          184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  232 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~  232 (375)
                      +..-+.+|++|||+|+ |-+|...++.+...|+ +|+++.++.++.+.++
T Consensus         4 ~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            3445688999999998 9999988887777799 9999998887766554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.29  E-value=0.1  Score=41.40  Aligned_cols=92  Identities=14%  Similarity=0.157  Sum_probs=62.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...+++++.+|. +|+..++........++.+....        .++.+.++      ..|+|+-
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~--------~~l~~~l~------~sD~v~~  106 (188)
T d2naca1          42 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMYP------VCDVVTL  106 (188)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHGG------GCSEEEE
T ss_pred             ccccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc--------CCHHHHHH------hccchhh
Confidence            367899999999999999999999999 99999976655555555554321        12322221      4788876


Q ss_pred             ccCCh-h---h-HHHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVP-S---L-LSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~-~---~-~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.... +   . -...+..++++ ..++.++..
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~g-a~lIN~aRG  138 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRG-AYIVNTARG  138 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             cccccccchhhhHHHHHHhCCCC-CEEEecCch
Confidence            65422 1   1 24677888886 777777633

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.28  E-value=0.15  Score=37.40  Aligned_cols=88  Identities=22%  Similarity=0.276  Sum_probs=56.6

Q ss_pred             CCCEEEEECCCHH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhh
Q 017201          190 KGSSVAVLGLGTV-----------GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGI  257 (375)
Q Consensus       190 ~g~~VlI~Gag~~-----------G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~  257 (375)
                      .-++|||+|+|+.           +.-|+..+|..|+ +++.+..+++....-..+ ++.+ +.+-.   .+....+.+ 
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePlt---~e~v~~Ii~-   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPIH---WEVVRKIIE-   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCCC---HHHHHHHHH-
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecCC---HHHHHHHHH-
Confidence            4478999998764           3445666667799 999999999886543332 2333 33333   233333332 


Q ss_pred             cCCCCccEEEEccCChhhHHHHHHhccc
Q 017201          258 THGMGVDYCFECTGVPSLLSEALETTKV  285 (375)
Q Consensus       258 ~~~~g~d~vid~~g~~~~~~~~~~~l~~  285 (375)
                        ..++|.|+-..|+...++.+.++...
T Consensus        80 --~E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          80 --KERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             --HHCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             --HhCcCCeEEEeeeehHhHHHHHHHHc
Confidence              23789999888887677777777654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.28  E-value=0.3  Score=38.16  Aligned_cols=135  Identities=13%  Similarity=0.125  Sum_probs=78.1

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcCCC-eEEE-EcCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGLG-AVDGARMHGAA-KIIG-IDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~~-ai~la~~~G~~-~V~~-~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|.- .+...+...-. ++++ +++++++.+. .++++...+++       ++.+.+.    ...+|.|+-
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-------~~~ell~----~~~id~v~I   73 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-------SYEELLE----SGLVDAVDL   73 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-------CHHHHHH----SSCCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-------eeecccc----ccccceeec
Confidence            6889999999964 46666655432 5664 4566666654 45677665542       2333332    337999999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCCC-cccc-chHHHhh-cCCceEEEEeecccc---CCCCHHHHHHHHHcCCCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIALA-CGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  342 (375)
                      ++....+.+.+..++..+  +=+.+..+.. .... .....+. .+++.+.-.+  +.+   +...+..+.+++++|++-
T Consensus        74 ~tp~~~h~~~~~~al~~g--k~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~--~~R~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          74 TLPVELNLPFIEKALRKG--VHVICEKPISTDVETGKKVVELSEKSEKTVYIAE--NFRENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             CCCGGGHHHHHHHHHHTT--CEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEEC--GGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred             cccccccccccccccccc--hhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eccccccCHHHHHHHHHHHCCCCc
Confidence            988777788888888874  5556665542 1111 1111122 2344433211  111   113466788888998874

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.27  E-value=0.11  Score=42.17  Aligned_cols=93  Identities=20%  Similarity=0.238  Sum_probs=62.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEEcCChhhHHHhhh----cCCcE---EeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARM---HGAAKIIGIDKNPWKKEKGKA----FGMTD---FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~---~G~~~V~~~~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~~i~~~  257 (375)
                      ++++.+||=+|+|. |..+..+++.   .++ +|++++.+++-++.+++    .+...   ..+.+.          ...
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~----------~~~  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDI----------RHV  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCT----------TTC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchh----------hcc
Confidence            68999999999974 7777777775   466 99999999988887764    23211   222111          112


Q ss_pred             cCCCCccEEEEccCC--------hhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .. ..+|+++-+...        ...++...+.|+|+ |.++...
T Consensus       105 ~~-~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         105 EI-KNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             CC-CSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cc-ccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            22 256776554321        13688999999998 9998764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.08  E-value=0.046  Score=40.41  Aligned_cols=65  Identities=11%  Similarity=0.063  Sum_probs=44.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +..++++|+|+|.+|+=.+++.+.+|. +|+.+...+.=+            ...+   .+..+.+.+....+|+.+..+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~~il------------~~~d---~~~~~~l~~~l~~~gv~~~~~   87 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMDGLM------------QGAD---RDLVKVWQKQNEYRFDNIMVN   87 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSSSSS------------TTSC---HHHHHHHHHHHGGGEEEEECS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeecccc------------ccch---hhHHHHHHHHHHHcCcccccC
Confidence            446899999999999988899999998 999998654211            1112   455555555544446655554


Q ss_pred             c
Q 017201          269 C  269 (375)
Q Consensus       269 ~  269 (375)
                      +
T Consensus        88 ~   88 (125)
T d1ojta2          88 T   88 (125)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.03  E-value=0.038  Score=43.81  Aligned_cols=84  Identities=21%  Similarity=0.278  Sum_probs=57.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.+|.|+|.|.+|...+++++.+|+ +|++.++++...       .....       .++.+.++      ..|+|+-
T Consensus        40 l~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~~-------~~~~~-------~~l~ell~------~sDiv~~   98 (181)
T d1qp8a1          40 IQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKEG-------PWRFT-------NSLEEALR------EARAAVC   98 (181)
T ss_dssp             CTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCCS-------SSCCB-------SCSHHHHT------TCSEEEE
T ss_pred             ccCceEEEeccccccccceeeeecccc-cccccccccccc-------ceeee-------echhhhhh------ccchhhc
Confidence            358899999999999999999999999 999998765321       11111       12222221      4788887


Q ss_pred             ccCC-hhh----HHHHHHhcccCCeEEEEEc
Q 017201          269 CTGV-PSL----LSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       269 ~~g~-~~~----~~~~~~~l~~~~G~iv~~g  294 (375)
                      +... +++    -...+..++++ ..++.++
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~-ailIN~~  128 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAED-AVFVNVG  128 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             ccccccccccccccceeeecccc-ceEEecc
Confidence            6642 221    14677888887 8888876

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.02  E-value=0.1  Score=44.91  Aligned_cols=73  Identities=19%  Similarity=0.312  Sum_probs=44.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC--Ch---hhHHHhhhcCCcEEe--CCCCCCcccHHHHHHhhcCCCCc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK--NP---WKKEKGKAFGMTDFI--NPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~--~~---~~~~~~~~lg~~~v~--~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      .+|||+|+ |-+|...++.+...|+ +|++++.  ..   ++...+...+--.++  |-.+  .+.+.+.+.    +.++
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~--~~~l~~~~~----~~~~   73 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN--KNDVTRLIT----KYMP   73 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHH----HHCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCC--HHHHHHHHH----hcCC
Confidence            37999998 9999988888877899 8999863  12   222333333322232  2222  122333222    3368


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |+||++.+
T Consensus        74 d~Vih~aa   81 (338)
T d1orra_          74 DSCFHLAG   81 (338)
T ss_dssp             SEEEECCC
T ss_pred             ceEEeecc
Confidence            99999885

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.01  E-value=0.089  Score=44.05  Aligned_cols=84  Identities=14%  Similarity=0.183  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhH-H-HhhhcCCcE---EeCCCCC-CcccHHHHHHhh
Q 017201          187 KVEKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKK-E-KGKAFGMTD---FINPDDE-PNKSISELVKGI  257 (375)
Q Consensus       187 ~~~~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~~~-~-~~~~lg~~~---v~~~~~~-~~~~~~~~i~~~  257 (375)
                      ++-.|+++||+|+ |  ++|.+.++-+...|+ +|+.+.++.++. + ..++++...   ..|-.+. +..+..+.+.+.
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhc
Confidence            3457899999985 4  599988888888899 899999887765 2 234455322   2222220 012233344333


Q ss_pred             c-CCCCccEEEEccC
Q 017201          258 T-HGMGVDYCFECTG  271 (375)
Q Consensus       258 ~-~~~g~d~vid~~g  271 (375)
                      . .....|+++++.|
T Consensus        81 ~~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIG   95 (268)
T ss_dssp             HCTTCCEEEEEECCC
T ss_pred             cccCCCcceeeeccc
Confidence            2 2336899999987

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.00  E-value=0.18  Score=39.81  Aligned_cols=90  Identities=26%  Similarity=0.354  Sum_probs=61.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.|.++.|+|.|.+|...+++++.+|+ +|++.++...+.. ....+...         .++.+.++      ..|+|+-
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~-~~~~~~~~---------~~l~ell~------~sDiv~~  104 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPAR-AAQLGIEL---------LSLDDLLA------RADFISV  104 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHH-HHHHTCEE---------CCHHHHHH------HCSEEEE
T ss_pred             ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhH-HhhcCcee---------ccHHHHHh------hCCEEEE
Confidence            467899999999999999999999999 9999987655433 23334321         12333332      3688877


Q ss_pred             ccC-Chh---hH-HHHHHhcccCCeEEEEEccC
Q 017201          269 CTG-VPS---LL-SEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g-~~~---~~-~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.. +++   .+ ...+..++++ ..++.++..
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~-a~lIN~sRG  136 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPG-VIIVNAARG  136 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTT-EEEEECSCT
T ss_pred             cCCCCchhhhhhhHHHHhhhCCC-ceEEEecch
Confidence            664 222   12 3677888887 888877644

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.95  E-value=0.14  Score=38.93  Aligned_cols=42  Identities=17%  Similarity=0.207  Sum_probs=32.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  235 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  235 (375)
                      +|.|+|.|.+|...+.-....|. .|++.++++++...++..+
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~   43 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERART   43 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhc
Confidence            68899999999987777777798 8988887776665554333

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.93  E-value=0.25  Score=36.69  Aligned_cols=76  Identities=21%  Similarity=0.145  Sum_probs=44.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|.|.|+ |-+|...++..... +. ++++.....+.                      ...    .. ..++|++||.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~~~----------------------~~~----~~-~~~~DvvIDFS   52 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAGDP----------------------LSL----LT-DGNTEVVIDFT   52 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTTCC----------------------THH----HH-TTTCSEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCc----------------------hhh----hc-cccCCEEEEcc
Confidence            5889998 99999988876654 55 66554321111                      100    11 12578888888


Q ss_pred             CChhhHHHHHHhcccCCeEEEEEccCCC
Q 017201          271 GVPSLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       271 g~~~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                      ... .....++.+... |.-+.+|.++-
T Consensus        53 ~p~-~~~~~~~~~~~~-~~~~ViGTTG~   78 (135)
T d1yl7a1          53 HPD-VVMGNLEFLIDN-GIHAVVGTTGF   78 (135)
T ss_dssp             CTT-THHHHHHHHHHT-TCEEEECCCCC
T ss_pred             cHH-HHHHHHHHHHhc-CCCEEEecccc
Confidence            655 444444444443 55566776653

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.05  Score=43.52  Aligned_cols=39  Identities=26%  Similarity=0.344  Sum_probs=33.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      ++|.|+|+|.+|..-++++...|+ .|+..+.+++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999987777788999 999999998876654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.89  E-value=0.041  Score=40.51  Aligned_cols=63  Identities=13%  Similarity=0.143  Sum_probs=43.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      ..++++|+|+|.+|+=.+++++.+|. +|+.+.++  +  .+..+         +   ++..+.+.+.....|+++..++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~--~--~l~~~---------D---~~~~~~l~~~l~~~Gv~i~~~~   81 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS--I--LLRGF---------D---QDMANKIGEHMEEHGIKFIRQF   81 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS--S--SSTTS---------C---HHHHHHHHHHHHHTTEEEEESC
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec--h--hhccC---------C---HHHHHHHHHHHHHCCCEEEECC
Confidence            34789999999999999999999998 89888753  2  22211         1   4455555554444477776654

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=93.82  E-value=0.066  Score=45.17  Aligned_cols=94  Identities=18%  Similarity=0.165  Sum_probs=64.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCc-EEeCCCCCCcccHHHHHHhhcCCCCccE
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      ..++.+||=+|+|. |..+..+++.. +. ++++++.+++-.+.+++.... .++..+.   .++     .+. ...+|+
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~---~~l-----~~~-~~sfD~  150 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFS-DTSMDA  150 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBC-TTCEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeeh---hhc-----cCC-CCCEEE
Confidence            46788999999874 67777888876 45 999999999988888764322 1221111   111     112 236999


Q ss_pred             EEEccCChhhHHHHHHhcccCCeEEEEEc
Q 017201          266 CFECTGVPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       266 vid~~g~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      |+.... +..+++..+.|+|+ |.++...
T Consensus       151 v~~~~~-~~~~~e~~rvLkpg-G~l~~~~  177 (268)
T d1p91a_         151 IIRIYA-PCKAEELARVVKPG-GWVITAT  177 (268)
T ss_dssp             EEEESC-CCCHHHHHHHEEEE-EEEEEEE
T ss_pred             EeecCC-HHHHHHHHHHhCCC-cEEEEEe
Confidence            986554 44789999999998 9888764

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.81  E-value=0.11  Score=44.25  Aligned_cols=97  Identities=16%  Similarity=0.168  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC---------c-EEeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM---------T-DFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~---------~-~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...++|||+|+|. |.++-.++++.+..+|++++.+++=.+.++++-.         . .++.      .|-.+.+++..
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNAA  151 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTSC
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhcc
Confidence            4457999998754 5556677887777689999999988888876421         1 1221      23445555544


Q ss_pred             CCCCccEEE-EccC---------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .+ .||+|| |...         +.+.++.+-++|+++ |.++.-.
T Consensus       152 ~~-~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  195 (290)
T d1xj5a_         152 EG-SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA  195 (290)
T ss_dssp             TT-CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             cc-CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence            33 799875 4432         234688899999997 8888764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.81  E-value=0.041  Score=40.62  Aligned_cols=34  Identities=12%  Similarity=0.142  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .++++|+|+|.+|+-.+..++.+|. +|+.+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            3789999999999999999999998 999998754

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.68  E-value=0.31  Score=37.82  Aligned_cols=101  Identities=22%  Similarity=0.252  Sum_probs=60.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHhhhcCCcEEeCCCCCCcccHHH-------HHHhhcCCCCc
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN--PWKKEKGKAFGMTDFINPDDEPNKSISE-------LVKGITHGMGV  263 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~--~~~~~~~~~lg~~~v~~~~~~~~~~~~~-------~i~~~~~~~g~  263 (375)
                      +|.|.|-|-+|....+++...+--+++++...  ......+..++.+......+ ....+..       .+..+.  .++
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~v~g~~~~~~--~~v   79 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPE-RVKLFEKAGIEVAGTVDDML--DEA   79 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGG-GHHHHHHTTCCCCEEHHHHH--HTC
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccc-cceeecccCcccCCChhHhh--cCC
Confidence            68899999999999888766553267666532  23334455555544322211 0000000       000011  269


Q ss_pred             cEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          264 DYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      |+|+||+|.-...+.+-..+..+ -+++..+.+.
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~~  112 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGGEK  112 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             CEEEEccCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            99999999765667777888886 7877776553

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.66  E-value=0.076  Score=43.37  Aligned_cols=104  Identities=13%  Similarity=0.099  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhh----cCCcE---EeCCCCCCcccHHHHH
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMTD---FINPDDEPNKSISELV  254 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~~i  254 (375)
                      ...+....++||-+|.+ .|..++.+|+.+  +. +|+.++.+++..+.+++    .|...   ++....   .+....+
T Consensus        53 ~L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda---~e~l~~~  127 (219)
T d2avda1          53 NLARLIQAKKALDLGTF-TGYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA---LETLDEL  127 (219)
T ss_dssp             HHHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH---HHHHHHH
T ss_pred             HHHHccCCCeEEEEech-hhHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEEEeeh---hhcchhh
Confidence            34556677899999985 477888888876  44 99999999988776653    45422   221111   2222222


Q ss_pred             HhhcCCCCccEEEEccCCh---hhHHHHHHhcccCCeEEEEE
Q 017201          255 KGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ........||.||--....   ..++.++++|+++ |.++.=
T Consensus       128 ~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~D  168 (219)
T d2avda1         128 LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVL  168 (219)
T ss_dssp             HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             hhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEe
Confidence            2222223699986554433   3578999999997 777654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.64  E-value=0.012  Score=51.35  Aligned_cols=93  Identities=22%  Similarity=0.196  Sum_probs=54.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCC---cEEeCCCCCCcccHHHHHHhhc
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM---TDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~---~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ..+.+|++||-+|+|. |.+++.+|+ .|+++|++++.++. ...+    ++-+.   ..++..+.   .++     . .
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~---~~~-----~-~   96 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKV---EEV-----E-L   96 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCT---TTC-----C-C
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccH---HHc-----c-c
Confidence            3467899999999874 777766665 57778999998764 3322    22232   12332221   111     1 1


Q ss_pred             CCCCccEEEEccC-----C----hhhHHHHHHhcccCCeEEE
Q 017201          259 HGMGVDYCFECTG-----V----PSLLSEALETTKVGKGKVI  291 (375)
Q Consensus       259 ~~~g~d~vid~~g-----~----~~~~~~~~~~l~~~~G~iv  291 (375)
                      ....+|+|+....     .    +..+...-++|+|+ |+++
T Consensus        97 ~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_          97 PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             ccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            2347899875322     1    12344556899997 8775

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.60  E-value=0.046  Score=45.02  Aligned_cols=37  Identities=22%  Similarity=0.215  Sum_probs=32.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .+.+++|+|+|+|+.|+.++..++..|+ +|++++.++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            4577899999999999999999999999 899998654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.24  Score=41.89  Aligned_cols=77  Identities=18%  Similarity=0.194  Sum_probs=43.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCC--eEEEEcCChhhHHHh----hhc---CCcE---EeCCCCCCcccHHHHHHhhcC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAA--KIIGIDKNPWKKEKG----KAF---GMTD---FINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~--~V~~~~~~~~~~~~~----~~l---g~~~---v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .|||+|+ +++|.+.++.+...|++  .|..+.++.++.+.+    +++   +...   ..|-.+  .++..+.+.+...
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~   81 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERVTE   81 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC--HHHHHHHHHTCTT
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc--hHhhhhhhhhccc
Confidence            3466788 99999887777778873  233444444433322    222   2221   224333  2344444444444


Q ss_pred             CCCccEEEEccCC
Q 017201          260 GMGVDYCFECTGV  272 (375)
Q Consensus       260 ~~g~d~vid~~g~  272 (375)
                      + .+|+++++.|.
T Consensus        82 g-~idilvnnag~   93 (285)
T d1jtva_          82 G-RVDVLVCNAGL   93 (285)
T ss_dssp             S-CCSEEEECCCC
T ss_pred             c-chhhhhhcccc
Confidence            3 79999998874

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.52  E-value=0.11  Score=45.19  Aligned_cols=76  Identities=18%  Similarity=0.101  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-hhhc----CCcEEe-CCCCCCcccHHHHHHhhcCCCC
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAF----GMTDFI-NPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~l----g~~~v~-~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      +|++|||+|+ |-+|...++.+...|+ +|+++++++.+... ++..    +...+. |-.+   .+..   .+......
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d---~~~l---~~~~~~~~   79 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD---QNKL---LESIREFQ   79 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC---HHHH---HHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeeccC---hHhh---hhhhhhch
Confidence            4799999998 9999999999999999 89999987654322 1111    222222 2222   2222   22222336


Q ss_pred             ccEEEEccCC
Q 017201          263 VDYCFECTGV  272 (375)
Q Consensus       263 ~d~vid~~g~  272 (375)
                      +|+|+.+++.
T Consensus        80 ~~~v~~~aa~   89 (356)
T d1rkxa_          80 PEIVFHMAAQ   89 (356)
T ss_dssp             CSEEEECCSC
T ss_pred             hhhhhhhhcc
Confidence            8999998864

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.42  E-value=0.3  Score=38.23  Aligned_cols=97  Identities=19%  Similarity=0.187  Sum_probs=57.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC-hh-hHHHhhhcCCcEEeCCCC--------CC-cccHHHHHHhhcCCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN-PW-KKEKGKAFGMTDFINPDD--------EP-NKSISELVKGITHGM  261 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~-~~-~~~~~~~lg~~~v~~~~~--------~~-~~~~~~~i~~~~~~~  261 (375)
                      +|.|.|-|-+|...++.+....--+++++... +. ....+...+.........        .. ...+. ...     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~-~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVE-DLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHH-HHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchh-hhh-----h
Confidence            58899999999999998886642277777543 22 223333333322211111        00 00111 110     1


Q ss_pred             CccEEEEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          262 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       262 g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ++|+||||+|.-...+.+-..+..+ -+++..+..
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~~  110 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGE  110 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECCC
Confidence            6899999999765667777888776 677766543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.36  E-value=0.12  Score=40.57  Aligned_cols=91  Identities=16%  Similarity=0.203  Sum_probs=61.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEE-cCChhhHHH-hhhcCCc---EEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          193 SVAVLGLGTVGLGAVDGARMH-GAAKIIGI-DKNPWKKEK-GKAFGMT---DFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~-G~~~V~~~-~~~~~~~~~-~~~lg~~---~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +|.|+|+|.+|...++..+.. ++ +++++ ++++++.+. +++++..   .++       .++.+.+.    ...+|+|
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~----~~~iD~v   70 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH-------GSYESLLE----DPEIDAL   70 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE-------SSHHHHHH----CTTCCEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec-------CcHHHhhh----cccccee
Confidence            588999999998877777776 55 77755 566666544 3455542   222       23333332    2379999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +-++....+.+.+..++..+  +=+.+..+.
T Consensus        71 ~I~tp~~~h~~~~~~~l~~g--~~v~~EKP~   99 (184)
T d1ydwa1          71 YVPLPTSLHVEWAIKAAEKG--KHILLEKPV   99 (184)
T ss_dssp             EECCCGGGHHHHHHHHHTTT--CEEEECSSC
T ss_pred             eecccchhhcchhhhhhhcc--ceeeccccc
Confidence            99998887889999999875  455666554

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.27  E-value=0.069  Score=41.98  Aligned_cols=48  Identities=17%  Similarity=0.068  Sum_probs=35.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      +.+...--+|++|||+|+|+++.+++..+..  ..+|+++.|+.+|.+.+
T Consensus         9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~~--~~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           9 LEEEIGRVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHCCCCSCEEEEECCSHHHHHHHHHHTS--SSEEEEECSSHHHHHHH
T ss_pred             HHHhCCCcCCCEEEEECCcHHHHHHHHHHcc--ccceeeehhhhhHHHHH
Confidence            3333344688999999999999887766543  34899999998887654

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=93.20  E-value=0.14  Score=43.35  Aligned_cols=97  Identities=21%  Similarity=0.242  Sum_probs=65.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhh----cCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .++.++.+||=+|+| .|..+..+++..  +. +|++++.+++-.+.+++    .+.+.-+...+     +    .++..
T Consensus        23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d-----~----~~~~~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGD-----A----TEIEL   91 (281)
T ss_dssp             SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTC-EEEEEECCHHHHHHHHHHHHSSSSEEEEEESC-----T----TTCCC
T ss_pred             hccCCcCEEEEecCc-CCHHHHHHHHhCCCCC-EEEEEecchhHhhhhhcccccccccccccccc-----c----ccccc
Confidence            357788999999997 488888898876  45 89999999987777653    34332121111     1    11111


Q ss_pred             CCCccEEEEccC-----Ch-hhHHHHHHhcccCCeEEEEEc
Q 017201          260 GMGVDYCFECTG-----VP-SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       260 ~~g~d~vid~~g-----~~-~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ...||+|+....     .+ ..++.+.+.|+|+ |.++...
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            236999986542     22 3688999999997 9888764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.10  E-value=0.052  Score=46.60  Aligned_cols=38  Identities=18%  Similarity=0.283  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ......+|+|+|+|+.|+.|+..+...|. +|++++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            34556799999999999998888888898 999998654

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.04  E-value=0.17  Score=43.57  Aligned_cols=96  Identities=16%  Similarity=0.137  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc------CC-----cEEeCCCCCCcccHHHHHHhh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF------GM-----TDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l------g~-----~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ...++|||+|+|. |..+-+++++....+|++++.+++=.+.++++      ++     -.++.      .|..+.+++ 
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~-  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER-  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH-
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhh-
Confidence            4568999998864 55666777776656999999999888777653      11     11221      234455554 


Q ss_pred             cCCCCccEEE-Ecc---C---------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCF-ECT---G---------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vi-d~~---g---------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      + +..||+|| |..   +         +.+.++.+-+.|+++ |.++.-.
T Consensus       148 ~-~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~  195 (312)
T d1uira_         148 T-EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (312)
T ss_dssp             C-CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             c-CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence            2 33799985 431   2         123577889999997 9877643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.085  Score=43.26  Aligned_cols=75  Identities=19%  Similarity=0.265  Sum_probs=46.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCCcEE-eCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .+.+|||+|+ |-+|...++.+...|. .+|+++++++.+...-+.-..... .|..+     . +.+.+...  ++|++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~-----~-~~~~~~~~--~~d~v   84 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK-----L-DDYASAFQ--GHDVG   84 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG-----G-GGGGGGGS--SCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc-----c-cccccccc--ccccc
Confidence            3478999998 9999988887776674 489999987655332221122222 22221     1 12233222  69999


Q ss_pred             EEccCC
Q 017201          267 FECTGV  272 (375)
Q Consensus       267 id~~g~  272 (375)
                      +.+.|.
T Consensus        85 i~~~~~   90 (232)
T d2bkaa1          85 FCCLGT   90 (232)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.85  E-value=0.16  Score=42.35  Aligned_cols=41  Identities=15%  Similarity=0.096  Sum_probs=32.3

Q ss_pred             CCCEEEEECC-CHHHHH-HHHHHHH--cCCCeEEEEcCChhhHHHh
Q 017201          190 KGSSVAVLGL-GTVGLG-AVDGARM--HGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~-ai~la~~--~G~~~V~~~~~~~~~~~~~  231 (375)
                      .|+.++|+|+ +++|.+ |.+||+.  .|+ +|+.+++++++++.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            4677788888 899986 5567764  588 999999999887655

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.84  E-value=0.16  Score=43.88  Aligned_cols=101  Identities=12%  Similarity=0.064  Sum_probs=61.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE--EeCCCCCCcccHHHHHHhhcCCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ..+|++||=.++|+ |..++++|+ .+ .+|++++.+++..+.+++    .|.+.  ++..+.   .++.+.+..  .+.
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~-g~-~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~---~~~~~~~~~--~~~  214 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL-GF-REVVAVDSSAEALRRAEENARLNGLGNVRVLEANA---FDLLRRLEK--EGE  214 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH-HE-EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCH---HHHHHHHHH--TTC
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh-cC-CcEEeecchHHHHHHHHHHHHHcCCCCcceeeccH---HHHhhhhHh--hhc
Confidence            45799999987643 333455554 34 499999999999888753    34432  232211   233332222  344


Q ss_pred             CccEEEEccC-----Ch----------hhHHHHHHhcccCCeEEEEEccCC
Q 017201          262 GVDYCFECTG-----VP----------SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       262 g~d~vid~~g-----~~----------~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      .||+|+--..     ..          ..+..++++|+|+ |.++.+..+.
T Consensus       215 ~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs~  264 (318)
T d1wxxa2         215 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCSH  264 (318)
T ss_dssp             CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             CCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence            7999874221     11          2456788999997 9998876554

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.84  E-value=0.26  Score=42.28  Aligned_cols=102  Identities=14%  Similarity=0.013  Sum_probs=63.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCC--CcccHHHHHHhhcCCCCcc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDE--PNKSISELVKGITHGMGVD  264 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~--~~~~~~~~i~~~~~~~g~d  264 (375)
                      ...++|||+|+|. |..+-.++++....+|++++.+++=.+.++++-..  ..++....  ...|..+.+++ +. ..||
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~-~~yD  181 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HK-NEFD  181 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CT-TCEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CC-CCCC
Confidence            4567999998864 44566777777766999999999888888764211  00110000  01244555554 33 3799


Q ss_pred             EEEEccCC----------hhhHHHHHHhcccCCeEEEEEc
Q 017201          265 YCFECTGV----------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       265 ~vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +||--...          .+.++.+-++|+++ |.++.-+
T Consensus       182 vII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~  220 (312)
T d2b2ca1         182 VIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  220 (312)
T ss_dssp             EEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             EEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEec
Confidence            98643221          23577788899997 9888765

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.83  E-value=0.33  Score=37.68  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=34.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  236 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~  236 (375)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            58899999999976666666788 89999999999987765543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.77  E-value=0.18  Score=41.90  Aligned_cols=35  Identities=9%  Similarity=0.104  Sum_probs=29.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      +.||+|+ +++|.+.++.+...|+ +|+.++++.++.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~   38 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGA   38 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHH
Confidence            3577788 9999999999889999 999999886653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.74  E-value=0.05  Score=43.38  Aligned_cols=83  Identities=10%  Similarity=0.014  Sum_probs=53.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-----EeCCCCC-CcccHHHHHHhhcCCCCccEE
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-----FINPDDE-PNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-----v~~~~~~-~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +|.|+|+|..|.+.+..+...|. +|+..+++++..+.+.+-+-..     +-.+.+. ...++.+.+.      +.|++
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~------~ad~i   81 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN------GAEII   81 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT------TCSCE
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC------CCCEE
Confidence            69999999999988777777777 8999999998887775432100     0001110 0122333332      58999


Q ss_pred             EEccCChhhHHHHHHhc
Q 017201          267 FECTGVPSLLSEALETT  283 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l  283 (375)
                      |-++.+. .+...++.+
T Consensus        82 iiavPs~-~~~~~~~~~   97 (189)
T d1n1ea2          82 LFVIPTQ-FLRGFFEKS   97 (189)
T ss_dssp             EECSCHH-HHHHHHHHH
T ss_pred             EEcCcHH-HHHHHHHHH
Confidence            9999876 555555443

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.74  E-value=0.06  Score=44.99  Aligned_cols=34  Identities=18%  Similarity=0.279  Sum_probs=29.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      .|+|+|+|+.|++++.+++..|..+|++++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6899999999999999999999658888887643

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.74  E-value=0.23  Score=43.26  Aligned_cols=74  Identities=15%  Similarity=0.211  Sum_probs=46.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          189 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       189 ~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      ..+.+|||+|+ |-+|...+..+...|. +|+++++.+............. ..|..     +.... .+...  ++|.|
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~D~~-----~~~~~-~~~~~--~~d~V   83 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDMFCDEFHLVDLR-----VMENC-LKVTE--GVDHV   83 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGGTCSEEEECCTT-----SHHHH-HHHHT--TCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchhhhcccCcEEEeech-----hHHHH-HHHhh--cCCeE
Confidence            46789999988 9999998888888998 9999975443321111112222 22322     23222 22222  69999


Q ss_pred             EEccC
Q 017201          267 FECTG  271 (375)
Q Consensus       267 id~~g  271 (375)
                      +.+.+
T Consensus        84 ih~a~   88 (363)
T d2c5aa1          84 FNLAA   88 (363)
T ss_dssp             EECCC
T ss_pred             eeccc
Confidence            98774

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.69  E-value=0.046  Score=45.03  Aligned_cols=33  Identities=21%  Similarity=0.390  Sum_probs=28.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +|+|+|+|+.|+.|+..++..|..+|++++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999988888888974699998654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.62  E-value=0.32  Score=35.13  Aligned_cols=86  Identities=16%  Similarity=0.005  Sum_probs=50.8

Q ss_pred             CCEEEEECCCHH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEe-CCCCCCcccHHHHHHhhc
Q 017201          191 GSSVAVLGLGTV-----------GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGIT  258 (375)
Q Consensus       191 g~~VlI~Gag~~-----------G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~  258 (375)
                      .++|||+|+|+.           +..|+..+|..|+ +++.+..+++....--.+ ++.++ .+-.   .+....+.+  
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYfeplt---~e~v~~Ii~--   76 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYFEPVT---LEDVLEIVR--   76 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEECCCCS---HHHHHHHHH--
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEEccCC---HHHHHHHHH--
Confidence            468999999754           3446666667799 999999999876432221 33332 2222   222222222  


Q ss_pred             CCCCccEEEEccCChhhHHHHHHhcc
Q 017201          259 HGMGVDYCFECTGVPSLLSEALETTK  284 (375)
Q Consensus       259 ~~~g~d~vid~~g~~~~~~~~~~~l~  284 (375)
                       .+++|.|+-..|+...++.+..+-+
T Consensus        77 -~E~p~~ii~~~GGQtalnla~~L~~  101 (121)
T d1a9xa4          77 -IEKPKGVIVQYGGQTPLKLARALEA  101 (121)
T ss_dssp             -HHCCSEEECSSSTHHHHTTHHHHHH
T ss_pred             -HhCCCEEEeehhhhhHHHHHHHHHH
Confidence             2357788877777655555554433

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.57  E-value=0.025  Score=49.54  Aligned_cols=94  Identities=21%  Similarity=0.229  Sum_probs=53.5

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCc---EEeCCCCCCcccHHHHHHhh
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT---DFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~---~v~~~~~~~~~~~~~~i~~~  257 (375)
                      .....+|++||-+|+|. |.+++.+|+ .|+++|++++.++ ..+.+    ++.+..   .++....   .++     . 
T Consensus        33 ~~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~---~~l-----~-  100 (328)
T d1g6q1_          33 NKDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL---EDV-----H-  100 (328)
T ss_dssp             HHHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTS-----C-
T ss_pred             ccccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh---hhc-----c-
Confidence            34567899999999873 666654444 6777999999875 33333    233321   1232221   111     1 


Q ss_pred             cCCCCccEEEEccC-----Ch----hhHHHHHHhcccCCeEEE
Q 017201          258 THGMGVDYCFECTG-----VP----SLLSEALETTKVGKGKVI  291 (375)
Q Consensus       258 ~~~~g~d~vid~~g-----~~----~~~~~~~~~l~~~~G~iv  291 (375)
                      .....+|+|+...-     ..    ..+...-++|+|+ |+++
T Consensus       101 ~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         101 LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             CcccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            12347999876321     11    1234445789997 8764

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=92.55  E-value=0.072  Score=41.56  Aligned_cols=83  Identities=17%  Similarity=0.187  Sum_probs=52.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|.|+|.|.+|...+...+.. ++ +++++....++.  ....+   +....+     .    ..+.  ..+|+|+.+++
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~--~~~~~---~~~~~~-----~----~~~~--~~~D~Vvi~tp   67 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATL--DTKTP---VFDVAD-----V----DKHA--DDVDVLFLCMG   67 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCC--SSSSC---EEEGGG-----G----GGTT--TTCSEEEECSC
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEeccccc--ccccc---cccchh-----h----hhhc--cccceEEEeCC
Confidence            589999999998877777765 55 666555333221  11111   111111     1    1111  26999999998


Q ss_pred             ChhhHHHHHHhcccCCeEEEEE
Q 017201          272 VPSLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       272 ~~~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ...+.+.+..+|..+ -.++.+
T Consensus        68 ~~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          68 SATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTTHHHHHHHHHTTT-SEEECC
T ss_pred             CcccHHHHHHHHHCC-CcEEEe
Confidence            887889999999996 666544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.55  E-value=0.05  Score=46.11  Aligned_cols=33  Identities=21%  Similarity=0.249  Sum_probs=29.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      .|+|+|+|+.|++++..++..|. +|++++.+++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 8999997754

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=92.53  E-value=0.09  Score=42.90  Aligned_cols=95  Identities=13%  Similarity=0.035  Sum_probs=59.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      ..+..++++||=+|+|. |..+..+++ .|. +|++++.+++-.+.+++...+  .++...-   .       .......
T Consensus        15 ~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~---~-------~~~~~~~   81 (225)
T d2p7ia1          15 FTPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRF---E-------DAQLPRR   81 (225)
T ss_dssp             HGGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCG---G-------GCCCSSC
T ss_pred             hhhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccc---c-------ccccccc
Confidence            33455677899999874 766766665 477 899999999998888754322  2222211   1       1222347


Q ss_pred             ccEEEEccC-----Ch-hhHHHHH-HhcccCCeEEEEE
Q 017201          263 VDYCFECTG-----VP-SLLSEAL-ETTKVGKGKVIVI  293 (375)
Q Consensus       263 ~d~vid~~g-----~~-~~~~~~~-~~l~~~~G~iv~~  293 (375)
                      ||+|+-.--     .+ ..+.... ++|+++ |.++..
T Consensus        82 fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          82 YDNIVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEEEEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            999874321     22 2355555 678997 877654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.53  E-value=0.074  Score=44.57  Aligned_cols=32  Identities=16%  Similarity=0.271  Sum_probs=28.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .+|||+|+ |-+|...+..++..|+ +|++++++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            36999998 9999999999999999 89999865

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.51  E-value=0.26  Score=42.47  Aligned_cols=73  Identities=12%  Similarity=0.075  Sum_probs=45.1

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcEEe-CCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      +|||+|+ |-+|...++.+...|..+|+++++...+...+.+. .+..+. |-.+  .+++.+...+     ++|+||.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~--~~~~~~~~~~-----~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISI--HSEWIEYHVK-----KCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTT--CSHHHHHHHH-----HCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCC--hHHHHHHHHh-----CCCccccc
Confidence            6999998 99999887776666743899998766554444332 222222 2112  1234333322     69999998


Q ss_pred             cCC
Q 017201          270 TGV  272 (375)
Q Consensus       270 ~g~  272 (375)
                      ++-
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            864

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.42  E-value=0.95  Score=38.02  Aligned_cols=56  Identities=14%  Similarity=0.236  Sum_probs=42.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEe
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~  240 (375)
                      +...+.++.+|....+|..|++++..|+.+|. +++++..   ++.|.+.++.+|++.++
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~-~~~i~~p~~~~~~k~~~~~~~GA~v~~  111 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGY-RMKLLMPDNMSQERRAAMRAYGAELIL  111 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEEEESCCCHHHHHHHHHTTCEEEE
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCc-ceEeeeccCchhhhhHHHHHhCCCcce
Confidence            44556677776666779999999999999998 5555553   56777888899987543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.39  E-value=0.12  Score=38.51  Aligned_cols=39  Identities=18%  Similarity=0.257  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      .++++++|+|+|+|.+|+-++..++..|. +|+.+.+.+.
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            45678999999999999988888889998 9999986643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.31  E-value=0.068  Score=42.44  Aligned_cols=39  Identities=33%  Similarity=0.417  Sum_probs=32.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      ++|.|+|+|.+|..-+.++...|+ +|+..+.+++.++.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            579999999999977777777799 999999998876654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.30  E-value=0.054  Score=41.32  Aligned_cols=85  Identities=6%  Similarity=-0.071  Sum_probs=51.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCCh
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP  273 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~~  273 (375)
                      |-++|+|.+|.+.++..+..+. .+.+.++++++.+.+.+.+.....+..+            ..  ...|+||-|+...
T Consensus         2 IgfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~------------~~--~~~DiVil~v~d~   66 (153)
T d2i76a2           2 LNFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK------------HP--ELNGVVFVIVPDR   66 (153)
T ss_dssp             CEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC------------CC--C---CEEECSCTT
T ss_pred             EEEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh------------hh--ccCcEEEEeccch
Confidence            3467999999877665554333 3457889999988887765543333222            11  1579999999765


Q ss_pred             hhHHHHHHhcccCCeEEEEEc
Q 017201          274 SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       274 ~~~~~~~~~l~~~~G~iv~~g  294 (375)
                       .+......++..+..++.++
T Consensus        67 -~i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          67 -YIKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             -THHHHHTTTCCSSCCEEECC
T ss_pred             -hhhHHHhhhcccceeeeecc
Confidence             67777777765424445444

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=92.28  E-value=0.2  Score=42.26  Aligned_cols=97  Identities=15%  Similarity=0.042  Sum_probs=64.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-----C-----cEEeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-----M-----TDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-----~-----~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ....++|||+|+|. |..+-.++++.+..+|++++.+++=.+.++++-     +     -.++..      |..+.+++ 
T Consensus        73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~------D~~~~l~~-  144 (274)
T d1iy9a_          73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAK-  144 (274)
T ss_dssp             SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHT-
T ss_pred             cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec------hHHHHHhh-
Confidence            34568999998764 556667778777779999999998888776542     1     112222      23334443 


Q ss_pred             cCCCCccEEE-EccC---------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      + +..||+|| |...         +.+.++.+-+.|+++ |.++.-.
T Consensus       145 ~-~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         145 S-ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             C-CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             c-CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            2 34799985 4322         234688899999997 9888754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.17  E-value=0.11  Score=37.38  Aligned_cols=34  Identities=24%  Similarity=0.300  Sum_probs=30.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .++++|+|+|.+|+-+++.++.+|. +|+.+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            3799999999999998999999998 999998654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.16  E-value=0.11  Score=44.93  Aligned_cols=32  Identities=16%  Similarity=0.186  Sum_probs=28.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      +++||+|+ |-+|...+..+...|+ +|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899998 9999988888888899 99999974

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.12  E-value=0.68  Score=34.78  Aligned_cols=39  Identities=38%  Similarity=0.457  Sum_probs=31.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWK  227 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~  227 (375)
                      ..+.+|.|+|+|.+|...+..+...+ +.+++.++.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            45678999999999998777777666 3479999988877

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.04  E-value=0.11  Score=40.81  Aligned_cols=38  Identities=29%  Similarity=0.319  Sum_probs=33.0

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh
Q 017201          193 SVAVL-GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  231 (375)
Q Consensus       193 ~VlI~-Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~  231 (375)
                      +|.|+ |+|.+|.+.++.+...|+ +|+..++++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            68888 559999998898889999 999999999887655

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.03  E-value=0.032  Score=48.21  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=27.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      ++|||+|+ |-+|...+..+...|+ +|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            57999998 9999988888888899 8999874

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.03  E-value=0.1  Score=42.91  Aligned_cols=34  Identities=24%  Similarity=0.327  Sum_probs=29.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .-.+|+|+|+|..|++++..+...|. +|+++++.
T Consensus         5 ~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            34579999999999998888888999 99999864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.99  E-value=0.21  Score=36.87  Aligned_cols=92  Identities=13%  Similarity=0.130  Sum_probs=56.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~-~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      +|.|+|+ |-+|++..++++..+. .++.. +.+..                     +.+          ..+|++||.+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~~id~~~~---------------------~~~----------~~~DVvIDFS   49 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVLKVDVNGV---------------------EEL----------DSPDVVIDFS   49 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEETTEE---------------------EEC----------SCCSEEEECS
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCC-eEEEEECCCcH---------------------HHh----------ccCCEEEEec
Confidence            6899998 9999999999988887 55543 21100                     010          1578999988


Q ss_pred             CChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceEEEE
Q 017201          271 GVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  318 (375)
Q Consensus       271 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  318 (375)
                      ... .....++..... +.-+.+|.++-....+....-..+.+.+...
T Consensus        50 ~p~-~~~~~l~~~~~~-~~p~ViGTTG~~~~~~~~i~~~ak~~pv~~a   95 (128)
T d1vm6a3          50 SPE-ALPKTVDLCKKY-RAGLVLGTTALKEEHLQMLRELSKEVPVVQA   95 (128)
T ss_dssp             CGG-GHHHHHHHHHHH-TCEEEECCCSCCHHHHHHHHHHTTTSEEEEC
T ss_pred             CHH-HHHHHHHHHHhc-CCCEEEEcCCCCHHHHHHHHHHHhhCCEEee
Confidence            766 444444444443 5556677665434444444444466665543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.98  E-value=0.41  Score=42.17  Aligned_cols=31  Identities=26%  Similarity=0.309  Sum_probs=27.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID  222 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~  222 (375)
                      |.+|||+|+ |-+|...++.+...|+ +|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            789999998 9999988888888998 999986

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.96  E-value=0.23  Score=41.12  Aligned_cols=95  Identities=19%  Similarity=0.225  Sum_probs=59.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCc-E--EeCCCCCCcccHHHHHHhhcCC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-D--FINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~-~--v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      .+++++||=+|+|. |..+..+++. |..+|++++.+++-++.+++    .+.. .  +...+.      .  -.....+
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~------~--~~~~~~~   91 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS------Y--GRHMDLG   91 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT------T--TSCCCCS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcch------h--hhccccc
Confidence            57899999999875 5566777775 44489999999998877753    2321 1  111110      0  0011123


Q ss_pred             CCccEEEEccCCh----------hhHHHHHHhcccCCeEEEEE
Q 017201          261 MGVDYCFECTGVP----------SLLSEALETTKVGKGKVIVI  293 (375)
Q Consensus       261 ~g~d~vid~~g~~----------~~~~~~~~~l~~~~G~iv~~  293 (375)
                      ..||+|+......          ..+..+.++|+++ |.++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            4699997643321          2466778899997 988754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.83  E-value=0.092  Score=42.14  Aligned_cols=87  Identities=25%  Similarity=0.251  Sum_probs=57.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.++...+...   ....    .     .++.+.+.      ..|+|.-+
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~---~~~~----~-----~~l~~l~~------~~D~v~~~  104 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGDH---PDFD----Y-----VSLEDLFK------QSDVIDLH  104 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSCC---TTCE----E-----CCHHHHHH------HCSEEEEC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhhh---cchh----H-----HHHHHHHH------hcccceee
Confidence            56899999999999999999999999 99999876443210   1111    1     12333222      36887666


Q ss_pred             cC-Chhh----HHHHHHhcccCCeEEEEEccC
Q 017201          270 TG-VPSL----LSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       270 ~g-~~~~----~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .. ++++    -...+..++++ ..++.++..
T Consensus       105 ~plt~~T~~li~~~~l~~mk~~-a~lIN~aRG  135 (199)
T d1dxya1         105 VPGIEQNTHIINEAAFNLMKPG-AIVINTARP  135 (199)
T ss_dssp             CCCCGGGTTSBCHHHHHHSCTT-EEEEECSCT
T ss_pred             ecccccccccccHHHhhccCCc-eEEEecccH
Confidence            53 3221    24577888887 887777643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.80  E-value=0.072  Score=43.78  Aligned_cols=38  Identities=18%  Similarity=0.213  Sum_probs=31.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE  229 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~  229 (375)
                      ++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~   39 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGED   39 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccccc
Confidence            357889988 9999998888888899 9999998877543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.78  E-value=0.073  Score=40.54  Aligned_cols=34  Identities=24%  Similarity=0.308  Sum_probs=30.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      -.|.+|||+|+|.+|.--+..+...|+ +|++++.
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            468999999999999999999999999 8888864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.75  E-value=0.091  Score=45.40  Aligned_cols=34  Identities=18%  Similarity=0.229  Sum_probs=29.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ..+|+|+|||..|+.++..+...|. +|++++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            5789999999999998888888898 999998654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=91.70  E-value=0.94  Score=33.93  Aligned_cols=94  Identities=11%  Similarity=0.070  Sum_probs=57.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH----HHhhhcCCcEEe-CCCCCCcccHHHHHHhhcCCCCccE
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK----EKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDY  265 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~----~~~~~lg~~~v~-~~~~~~~~~~~~~i~~~~~~~g~d~  265 (375)
                      -++++|.|.|.+|...++.+...|. .|++++.++++.    +.+...+...+. |..+   +++   +++..- ...|.
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d---~~~---L~~a~i-~~a~~   74 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPGDSND---SSV---LKKAGI-DRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS---HHH---HHHHTT-TTCSE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEEccCcc---hHH---HHHhcc-ccCCE
Confidence            3579999999999999999999998 899998887643    222334555443 2222   222   333322 36899


Q ss_pred             EEEccCChhh---HHHHHHhcccCCeEEEEE
Q 017201          266 CFECTGVPSL---LSEALETTKVGKGKVIVI  293 (375)
Q Consensus       266 vid~~g~~~~---~~~~~~~l~~~~G~iv~~  293 (375)
                      ++-+++++..   .-...+.+.+. -+++..
T Consensus        75 vi~~~~~d~~n~~~~~~~r~~~~~-~~iia~  104 (153)
T d1id1a_          75 ILALSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             EEEccccHHHHHHHHHHHHHhCCC-CceEEE
Confidence            9988887632   11233344554 455443

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.56  E-value=0.084  Score=43.83  Aligned_cols=33  Identities=18%  Similarity=0.241  Sum_probs=28.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      .|+|+|+|+.|++|+..+...|. +|++++.+++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999998888888898 8999997653

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.24  Score=41.64  Aligned_cols=107  Identities=11%  Similarity=-0.016  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc-----CC-CeEEEEcCChhhHHHhhhcC-----C-cEEeCCCCCCcccHHHHH
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMH-----GA-AKIIGIDKNPWKKEKGKAFG-----M-TDFINPDDEPNKSISELV  254 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~-----G~-~~V~~~~~~~~~~~~~~~lg-----~-~~v~~~~~~~~~~~~~~i  254 (375)
                      ..++.-+||=+|+|. |..+..+++.+     +. .++++++.++.-.+.+++.-     . ...++......+++....
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRM  115 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchh
Confidence            345555899999863 44444444432     22 16789998888777765421     1 111221110012222233


Q ss_pred             HhhcCCCCccEEEEccC-----Ch-hhHHHHHHhcccCCeEEEEEcc
Q 017201          255 KGITHGMGVDYCFECTG-----VP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g-----~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      ........||+|+-...     .+ ..+..+.++|+|+ |.++....
T Consensus       116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            33333458999976443     22 4788999999997 98777643

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.54  E-value=0.25  Score=42.67  Aligned_cols=72  Identities=17%  Similarity=0.114  Sum_probs=43.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC----hhhHHHhh---hcCCcEE-eCCCCCCcccHHHHHHhhcCCCCc
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN----PWKKEKGK---AFGMTDF-INPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~----~~~~~~~~---~lg~~~v-~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      +|||+|+ |-+|...+..+...|+ +|+++++.    .+.....+   .-+...+ .|-.+  .+.+.+.++.    .++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~~----~~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN--EALMTEILHD----HAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC--HHHHHHHHHH----TTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC--HHHHHHHHhc----cCC
Confidence            6999998 9999998888888898 89998642    22222222   2233332 22222  1223333332    379


Q ss_pred             cEEEEccC
Q 017201          264 DYCFECTG  271 (375)
Q Consensus       264 d~vid~~g  271 (375)
                      |+||++++
T Consensus        75 d~ViHlAa   82 (338)
T d1udca_          75 DTVIHFAG   82 (338)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999875

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.48  E-value=0.052  Score=42.98  Aligned_cols=36  Identities=25%  Similarity=0.160  Sum_probs=30.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      ++..|+|+|+|+.|+.|+..+.+.|. +|+.+++.+.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~~   39 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGMEK   39 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSST
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeecc
Confidence            45679999999999999999999999 8888875443

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.37  E-value=0.091  Score=43.27  Aligned_cols=31  Identities=42%  Similarity=0.547  Sum_probs=27.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      |+|+|+|+.|++++..+...|. +|++++.++
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7899999999988877788898 999998764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=91.32  E-value=0.091  Score=41.02  Aligned_cols=31  Identities=19%  Similarity=0.238  Sum_probs=27.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .|+|+|+|+.|+.|+..|...|. +|+.+++.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGER   33 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEEe
Confidence            48899999999999999999999 88888753

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=91.32  E-value=0.21  Score=43.63  Aligned_cols=33  Identities=18%  Similarity=0.253  Sum_probs=27.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +.|||+|+ |-+|...+..+...|. +|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57899998 9999988888888898 999999743

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.27  E-value=0.83  Score=35.16  Aligned_cols=95  Identities=19%  Similarity=0.244  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc-EEeCCCCCCcccHHHHHHhhcC
Q 017201          187 KVEKGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       187 ~~~~g~~VlI~Ga--g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      .+.+|.+||=.++  |.+|+   ..+ ..|+ +|+.++.+++..+.++    .++.. .+.....   ..+.....  ..
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~a~-~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~~~~~~~--~~  107 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---EAA-SEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLPEAK--AQ  107 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---HHH-HTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHHHHH--HT
T ss_pred             cccCCCeEEEeccccchhhh---hhh-hccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hccccccc--cc
Confidence            5688999998865  55554   433 3588 8999999998887764    34543 3443332   22222221  23


Q ss_pred             CCCccEEEEc----cCChhhHHHHH--HhcccCCeEEEE
Q 017201          260 GMGVDYCFEC----TGVPSLLSEAL--ETTKVGKGKVIV  292 (375)
Q Consensus       260 ~~g~d~vid~----~g~~~~~~~~~--~~l~~~~G~iv~  292 (375)
                      +..||+||-.    .+....+...+  .+++++ |.++.
T Consensus       108 ~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         108 GERFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             CCccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            3479999742    22233444443  347775 76553

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.24  E-value=0.39  Score=38.89  Aligned_cols=92  Identities=17%  Similarity=0.216  Sum_probs=59.3

Q ss_pred             EEEEECCCHHHH-HHHHHHHHc-CCCeEEE-EcCChhhHHH-hhhcCCc--EEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          193 SVAVLGLGTVGL-GAVDGARMH-GAAKIIG-IDKNPWKKEK-GKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       193 ~VlI~Gag~~G~-~ai~la~~~-G~~~V~~-~~~~~~~~~~-~~~lg~~--~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +|.|+|+|.+|. ..+...+.. +. +|++ +++++++.+. +++++..  .+..+.+         +.++....++|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d---------~~ell~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN---------FDKIAKDPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS---------GGGGGGCTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc---------hhhhcccccceee
Confidence            688999999986 344444444 66 6664 5667777554 4566653  2333332         2233344479999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +-++....+.+.+..++..+  +=+.+..+
T Consensus       105 ~I~tp~~~H~~~~~~al~~g--k~v~~EKP  132 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKAG--KHVMCEKP  132 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHTT--CEEEECSS
T ss_pred             eeccchhhhhhHHHHhhhcc--hhhhcCCC
Confidence            99998877888999999874  55666644

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=0.91  Score=39.46  Aligned_cols=110  Identities=15%  Similarity=0.239  Sum_probs=70.2

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEeCCCCC--------------
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFINPDDE--------------  245 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~~~~~~--------------  245 (375)
                      .+...++++..|+...+|..|.+.+.+|+.+|. +.+++..   +++|.+.++.+|++.+......              
T Consensus        89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi-~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~  167 (355)
T d1jbqa_          89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGY-RCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWR  167 (355)
T ss_dssp             HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHH
T ss_pred             HHcCCcccCceEEEecccchhhHHHHHHHhccC-CeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHH
Confidence            345566777777777779999999999999999 5555543   4678888899999765422110              


Q ss_pred             ---------------Cc-------ccHHHHHHhhcCCCCccEEEEccCChhh---HHHHHHhcccCCeEEEEEcc
Q 017201          246 ---------------PN-------KSISELVKGITHGMGVDYCFECTGVPSL---LSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       246 ---------------~~-------~~~~~~i~~~~~~~g~d~vid~~g~~~~---~~~~~~~l~~~~G~iv~~g~  295 (375)
                                     ..       .....++.+..++ .+|.||-++|+...   +-..++...+. -+++.+..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~-~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep  240 (355)
T d1jbqa_         168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDG-KLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP  240 (355)
T ss_dssp             HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTT-CCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             HHHhccccccccccCcccchhhhcccchhhhhhhcCC-CCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence                           00       0011223222333 58999999987643   33455556666 77777653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.23  E-value=0.14  Score=39.50  Aligned_cols=36  Identities=28%  Similarity=0.379  Sum_probs=29.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNP  225 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~-~V~~~~~~~  225 (375)
                      .|++|+|+|+|..|+.+++.++..+.. +|+.++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999888888877742 788887654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.02  E-value=0.14  Score=43.68  Aligned_cols=35  Identities=23%  Similarity=0.415  Sum_probs=30.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ++..+|+|+|+|..|+.|+..+...|. +|++++.+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            456789999999999999888888999 99999854

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.96  E-value=0.098  Score=42.17  Aligned_cols=31  Identities=32%  Similarity=0.322  Sum_probs=27.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      -|+|+|+|+.|+.|+..+..+|. +|++++..
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            47889999999999999999998 89999754

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.96  E-value=0.25  Score=42.05  Aligned_cols=96  Identities=14%  Similarity=0.143  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC----------cEEeCCCCCCcccHHHHHHhhc
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----------TDFINPDDEPNKSISELVKGIT  258 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~----------~~v~~~~~~~~~~~~~~i~~~~  258 (375)
                      ...++|||+|+|. |..+-.++++.+..+|++++.+++=.+.++++-.          -.++.      .|..+.+++. 
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~~-  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRKF-  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGGC-
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh------hhHHHHHhcC-
Confidence            3458999998754 4456677777776699999999988887765321          01221      2344555442 


Q ss_pred             CCCCccEEE-EccC----------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCF-ECTG----------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vi-d~~g----------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      + ..||+|| |...          +.+.++.+.+.|+++ |.++.-.
T Consensus       160 ~-~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~  204 (295)
T d1inla_         160 K-NEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  204 (295)
T ss_dssp             S-SCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             C-CCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEec
Confidence            3 3799985 3321          224678899999997 9887754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=90.93  E-value=0.47  Score=39.76  Aligned_cols=33  Identities=21%  Similarity=0.239  Sum_probs=28.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ++|||+|+ |-+|...+..+...|. +|+++++++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            56999998 9999998888888898 899998764

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.91  E-value=0.46  Score=40.14  Aligned_cols=97  Identities=13%  Similarity=0.074  Sum_probs=63.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCC----------cEEeCCCCCCcccHHHHHHhh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----------TDFINPDDEPNKSISELVKGI  257 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~----------~~v~~~~~~~~~~~~~~i~~~  257 (375)
                      ....++|||+|+|. |..+-.++++.+..+|++++.+++=.+.++++-.          -.++.      .|..+.+++ 
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~------~Da~~~l~~-  147 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQ-  147 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHT-
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE------ccHHHHHhc-
Confidence            34558999998764 5566677777776799999999988888765321          11221      234445543 


Q ss_pred             cCCCCccEEE-EccC---------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          258 THGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       258 ~~~~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +. ..||+|| |...         +.+.++.+-+.|+++ |.++.-.
T Consensus       148 ~~-~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  192 (285)
T d2o07a1         148 NQ-DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  192 (285)
T ss_dssp             CS-SCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CC-CCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence            33 3799985 4331         113577788899997 8887654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.81  E-value=0.52  Score=40.66  Aligned_cols=31  Identities=26%  Similarity=0.216  Sum_probs=26.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      +.|||+|+ |-+|...+..+...|+ +|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            57899998 9999988888778898 8999864

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.66  E-value=0.22  Score=37.99  Aligned_cols=37  Identities=22%  Similarity=0.296  Sum_probs=31.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .-+++|+|+|+|.+|.=++..+.++|++.|+.+.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4567899999999999999888999997788877543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.51  E-value=0.3  Score=35.14  Aligned_cols=66  Identities=11%  Similarity=0.018  Sum_probs=41.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAA--KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~--~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      +.+++++|+|+|.+|.-++.+++.+|.+  +|+.+.+.+.=   +..         -+   ++..+.+.+....+|+++.
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~i---L~~---------~d---~~~~~~l~~~l~~~GV~v~   82 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMI---LRG---------FD---HTLREELTKQLTANGIQIL   82 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS---STT---------SC---HHHHHHHHHHHHHTTCEEE
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccchh---hcc---------cc---hHHHHHHHHHHHhcCcEEE
Confidence            3458999999999999777666666542  68888754321   111         11   4555555555445578887


Q ss_pred             EEc
Q 017201          267 FEC  269 (375)
Q Consensus       267 id~  269 (375)
                      .++
T Consensus        83 ~~~   85 (117)
T d1aoga2          83 TKE   85 (117)
T ss_dssp             ESC
T ss_pred             cCC
Confidence            765

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=90.51  E-value=0.36  Score=37.13  Aligned_cols=95  Identities=17%  Similarity=0.159  Sum_probs=63.5

Q ss_pred             ccccchhhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcc
Q 017201          170 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK  248 (375)
Q Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~  248 (375)
                      .+||+....+..+.+..-.-.|++|+|+|- ..+|.-...|+...|+ +|+.+.+...                      
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~----------------------   72 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTK----------------------   72 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCS----------------------
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-cccccccccc----------------------
Confidence            456554444443333333457999999998 6799988888888899 8887764322                      


Q ss_pred             cHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          249 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       249 ~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +..+.++      ..|+++-++|.+..+.  -..++++ ..++.+|..
T Consensus        73 ~l~~~~~------~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          73 NLRHHVE------NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             CHHHHHH------HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             hhHHHHh------hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence            2222232      4899999999875443  2466776 888888765

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=90.50  E-value=0.092  Score=44.04  Aligned_cols=32  Identities=28%  Similarity=0.465  Sum_probs=28.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +|+|+|+|..|+.|+..+...|. +|++++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            58999999999999888888999 899998653

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.47  E-value=0.46  Score=39.93  Aligned_cols=95  Identities=15%  Similarity=0.125  Sum_probs=60.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcC-C---------------cEEeCCCCCCcccHH
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-M---------------TDFINPDDEPNKSIS  251 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-~---------------~~v~~~~~~~~~~~~  251 (375)
                      ....++|||+|+|. |..+-.++++ +..+|++++.+++=.+.++++- .               -.++.      .|..
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~------~Da~  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGF  141 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE------ChHH
Confidence            35568999998753 3444555554 4458999999988888776532 1               01222      2344


Q ss_pred             HHHHhhcCCCCccEEE-EccC---------ChhhHHHHHHhcccCCeEEEEEc
Q 017201          252 ELVKGITHGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       252 ~~i~~~~~~~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +.+++   .++||+|| |...         +.+.++.+-+.|+++ |.++.-+
T Consensus       142 ~~l~~---~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         142 EFIKN---NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             HHHHH---CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             HHHhc---cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence            44543   24799985 4432         124678899999998 9887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=90.32  E-value=0.5  Score=39.26  Aligned_cols=35  Identities=14%  Similarity=0.203  Sum_probs=30.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK  227 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~  227 (375)
                      ++|||+|+ |-+|...+..+...|. +|+++++++..
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~~   39 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTA   39 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCcc
Confidence            57999998 9999998888888898 89999986543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.31  E-value=1  Score=34.92  Aligned_cols=78  Identities=9%  Similarity=0.025  Sum_probs=46.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHhhhcC------C----cEEeCCCCCCcccHHHHHHhhcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFG------M----TDFINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lg------~----~~v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      +|.|+|+|..|.+.+..+...|. +|+...+..+  ..+.+.+..      .    ..+.-     ..++.+.+.     
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~-----~~~~~~~~~-----   70 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW-----PEQLEKCLE-----   70 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC-----GGGHHHHHT-----
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccc-----cccHHHHHh-----
Confidence            68999999999976666666787 8988876433  233332211      1    01111     123333332     


Q ss_pred             CCccEEEEccCChhhHHHHHHhc
Q 017201          261 MGVDYCFECTGVPSLLSEALETT  283 (375)
Q Consensus       261 ~g~d~vid~~g~~~~~~~~~~~l  283 (375)
                       +.|+||-++... .+...++-+
T Consensus        71 -~ad~Ii~avps~-~~~~~~~~l   91 (180)
T d1txga2          71 -NAEVVLLGVSTD-GVLPVMSRI   91 (180)
T ss_dssp             -TCSEEEECSCGG-GHHHHHHHH
T ss_pred             -ccchhhcccchh-hhHHHHHhh
Confidence             589999999876 445544433

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.30  E-value=0.19  Score=40.72  Aligned_cols=101  Identities=23%  Similarity=0.207  Sum_probs=59.7

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhh----hcCCcE---EeCCCCCCcccHHHHHH
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVK  255 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~~i~  255 (375)
                      ..+..+.++||-+|.+ .|..++.+|+++  +. +|++++.+++..+.++    ..|...   ++....   .++...+.
T Consensus        51 lv~~~kpk~ILEiGt~-~G~Sti~la~al~~~g-~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~---~e~l~~l~  125 (214)
T d2cl5a1          51 VIREYSPSLVLELGAY-CGYSAVRMARLLQPGA-RLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGAS---QDLIPQLK  125 (214)
T ss_dssp             HHHHHCCSEEEEECCT-TSHHHHHHHTTCCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH---HHHGGGHH
T ss_pred             HHHhhCCCEEEEEccC-chhHHHHHHHhCCCcc-EEEEEeccHHHHHHHHHHHHHcCCCccceeeeccc---cccccchh
Confidence            3344566899999985 367778888876  44 9999999998877664    345422   222211   22222333


Q ss_pred             hhcCCCCccEEEEccCChh-----hHHHHHHhcccCCeEEE
Q 017201          256 GITHGMGVDYCFECTGVPS-----LLSEALETTKVGKGKVI  291 (375)
Q Consensus       256 ~~~~~~g~d~vid~~g~~~-----~~~~~~~~l~~~~G~iv  291 (375)
                      +......+|+||--.....     .+..++++|+++ |.++
T Consensus       126 ~~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv  165 (214)
T d2cl5a1         126 KKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLL  165 (214)
T ss_dssp             HHSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             hcccccccceeeecccccccccHHHHHHHhCccCCC-cEEE
Confidence            2223336898864433221     244566778996 7544

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.29  E-value=0.39  Score=38.68  Aligned_cols=96  Identities=11%  Similarity=0.009  Sum_probs=63.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc----CCcE--EeCCCCCCcccHHHHHHhhc-
Q 017201          186 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTD--FINPDDEPNKSISELVKGIT-  258 (375)
Q Consensus       186 ~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----g~~~--v~~~~~~~~~~~~~~i~~~~-  258 (375)
                      ....++.+||=+|+|. |..+..+++..+. +|++++.+++-.+.+++.    +...  ++..+      +    .++. 
T Consensus        56 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d------~----~~~~~  123 (222)
T d2ex4a1          56 PNKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG------L----QDFTP  123 (222)
T ss_dssp             --CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC------G----GGCCC
T ss_pred             cCCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccc------c----ccccc
Confidence            3457788999999974 7777777776665 999999999888777643    2221  22211      1    1111 


Q ss_pred             CCCCccEEEEccC-----Ch---hhHHHHHHhcccCCeEEEEEc
Q 017201          259 HGMGVDYCFECTG-----VP---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       259 ~~~g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      ....||+|+....     .+   ..+..+.+.|+++ |.++...
T Consensus       124 ~~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~  166 (222)
T d2ex4a1         124 EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKD  166 (222)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEE
Confidence            2337999976432     22   3677889999997 9888764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.25  E-value=0.19  Score=36.61  Aligned_cols=37  Identities=19%  Similarity=0.338  Sum_probs=31.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ++.+.+++|+|+|.+|+-+++.+...|. +|+.+.+++
T Consensus        29 ~~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          29 IENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hhcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            3456899999999999988888889998 999998654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.17  E-value=0.28  Score=35.25  Aligned_cols=35  Identities=9%  Similarity=0.020  Sum_probs=26.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc---CCCeEEEEcCCh
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMH---GAAKIIGIDKNP  225 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~---G~~~V~~~~~~~  225 (375)
                      ..++++|+|+|.+|.=.+.++..+   |. +|..+.+++
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence            357999999999998666655443   66 888887653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=90.10  E-value=0.58  Score=40.36  Aligned_cols=38  Identities=18%  Similarity=0.191  Sum_probs=32.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          190 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       190 ~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      +-++|||+|+ |.+|...+..+...|+ +|+++.+++++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchh
Confidence            4578999998 9999998888888899 899999876654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=89.98  E-value=1  Score=38.55  Aligned_cols=101  Identities=18%  Similarity=0.176  Sum_probs=63.3

Q ss_pred             cCCCCCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh------cCCc--EEeCCCCCCcccHHHHHH
Q 017201          186 AKVEKGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA------FGMT--DFINPDDEPNKSISELVK  255 (375)
Q Consensus       186 ~~~~~g~~VlI~Ga--g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~------lg~~--~v~~~~~~~~~~~~~~i~  255 (375)
                      ..+.+|++||=..+  |+.++.   ++ ..|++.|++++.++...+++++      +..+  .++..      +..+.++
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~---aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~------d~~~~l~  209 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA---AA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM------DVFDYFK  209 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH---HH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES------CHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH---HH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc------cHHHHHH
Confidence            45778999998854  655543   22 4677789999999988887752      2221  23322      3334443


Q ss_pred             hhc-CCCCccEEEEccC---C------------hhhHHHHHHhcccCCeEEEEEccCC
Q 017201          256 GIT-HGMGVDYCFECTG---V------------PSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       256 ~~~-~~~g~d~vid~~g---~------------~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ... .+..||+||---.   .            .+.+..++++|+|+ |.++.+..+.
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs~  266 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNAA  266 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence            322 3447999864211   0            12566788999997 9988876553

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.95  E-value=0.73  Score=40.48  Aligned_cols=96  Identities=20%  Similarity=0.134  Sum_probs=63.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh---cC-Cc----------------EEeCCCCCCccc
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FG-MT----------------DFINPDDEPNKS  249 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lg-~~----------------~v~~~~~~~~~~  249 (375)
                      .+.+||= +-++.|.-++++|+..|+.+|++.+.+++-.+++++   +. ..                ..++.     .|
T Consensus        45 ~~~~vLD-~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~-----~D  118 (375)
T d2dula1          45 NPKIVLD-ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH-----DD  118 (375)
T ss_dssp             CCSEEEE-SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE-----SC
T ss_pred             CCCEEEE-cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeeh-----hh
Confidence            3444333 446678888999999998899999999998888752   11 11                01111     12


Q ss_pred             HHHHHHhhcCCCCccEE-EEccCCh-hhHHHHHHhcccCCeEEEEEc
Q 017201          250 ISELVKGITHGMGVDYC-FECTGVP-SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       250 ~~~~i~~~~~~~g~d~v-id~~g~~-~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .-..+.  ..++.||+| ||..|++ +.+..|+++++++ |.+....
T Consensus       119 a~~~~~--~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa  162 (375)
T d2dula1         119 ANRLMA--ERHRYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA  162 (375)
T ss_dssp             HHHHHH--HSTTCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hhhhhH--hhcCcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence            222222  234479976 8999875 5789999999997 7776664

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.94  E-value=0.15  Score=41.29  Aligned_cols=31  Identities=32%  Similarity=0.371  Sum_probs=27.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      |+|+|+|..|+.|+..+...|. +|++++.++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7899999999988887778898 999999764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.88  E-value=0.45  Score=35.70  Aligned_cols=94  Identities=19%  Similarity=0.227  Sum_probs=57.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhhhcCC------cEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGM------TDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lg~------~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ++|.|+|| |.+|...+.++...+. .+++.++.++.+.+.+.-..+      ...+..     .+..+.+      ++.
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~------~~a   69 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGP-----EQLPDCL------KGC   69 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESG-----GGHHHHH------TTC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcC-----CChHHHh------CCC
Confidence            47899997 9999988888887775 688889887665433221111      112221     2333333      269


Q ss_pred             cEEEEccCChh------------------hHHHHHHhcccCCeEEEEEccCC
Q 017201          264 DYCFECTGVPS------------------LLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       264 d~vid~~g~~~------------------~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      |+|+-+.|.+.                  .+-..+.-.++. +.++.+..+-
T Consensus        70 DivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~-~iiivvtNPv  120 (144)
T d1mlda1          70 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPD-AMICIISNPV  120 (144)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT-SEEEECSSCH
T ss_pred             CEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCC-eEEEEecCch
Confidence            99999988431                  112233333666 8888776553

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.85  E-value=0.14  Score=41.22  Aligned_cols=31  Identities=26%  Similarity=0.411  Sum_probs=27.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      -|+|+|+|+.|+.|+..|..+|. +|++++.+
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            37899999999999999999998 89999864

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.72  E-value=0.16  Score=43.36  Aligned_cols=32  Identities=31%  Similarity=0.334  Sum_probs=28.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .|+|+|||+.|++++..++..|. .|++.+..+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            58999999999999999999999 899998754

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=89.69  E-value=2.4  Score=31.51  Aligned_cols=38  Identities=21%  Similarity=0.244  Sum_probs=29.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhH
Q 017201          191 GSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKK  228 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~  228 (375)
                      ..+|.|+|+|.+|...+..+...| +..++.++.++++.
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            458999999999997666666655 45899999887654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=89.66  E-value=0.19  Score=41.57  Aligned_cols=34  Identities=24%  Similarity=0.331  Sum_probs=28.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      +.|||+|+ +++|.+.++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            35788888 9999998888888899 8999987654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=89.44  E-value=0.11  Score=43.72  Aligned_cols=34  Identities=24%  Similarity=0.421  Sum_probs=27.3

Q ss_pred             CCEEEEECCCHHHHHHH-HHHHHcCCCeEEEEcCCh
Q 017201          191 GSSVAVLGLGTVGLGAV-DGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       191 g~~VlI~Gag~~G~~ai-~la~~~G~~~V~~~~~~~  225 (375)
                      ..-|+|+|+|+.|+.|+ .+|+..|. +|++++.++
T Consensus        33 e~DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~   67 (278)
T d1rp0a1          33 ETDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV   67 (278)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred             CCCEEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence            34599999999999765 56677799 999999764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.41  E-value=0.15  Score=39.55  Aligned_cols=31  Identities=23%  Similarity=0.249  Sum_probs=25.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEE
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI  221 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~  221 (375)
                      .+++|+|+|+|++|+-++..++.+|. ++.++
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~-~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIR   32 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCC-ceEEE
Confidence            57899999999999988888888887 44443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.41  E-value=0.76  Score=35.38  Aligned_cols=95  Identities=24%  Similarity=0.248  Sum_probs=63.3

Q ss_pred             cccccchhhhhhhhhhhcC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCC
Q 017201          169 SFLSCGFTTGYGAAWKEAK-VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       169 a~l~~~~~ta~~~l~~~~~-~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~  246 (375)
                      +.+||+....+..+ +.-+ --.|++|+|+|. ..+|.-.+.|+...|+ +|+.+.+....                   
T Consensus        17 ~~~PcTp~aii~lL-~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~-------------------   75 (170)
T d1a4ia1          17 CFIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAH-------------------   75 (170)
T ss_dssp             CCCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSS-------------------
T ss_pred             CCCCChHHHHHHHH-HHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccccc-------------------
Confidence            44666555544433 3334 358999999998 7899988888888899 89888753322                   


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                         ..+.++      ..|+++-++|.+..+.  -..++++ ..++.+|..
T Consensus        76 ---l~~~~~------~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          76 ---LDEEVN------KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             ---HHHHHT------TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             ---HHHHHh------hccchhhccccccccc--cccccCC-CeEeccCcc
Confidence               211121      4788888888774433  3467776 788888754

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.36  E-value=0.16  Score=40.87  Aligned_cols=31  Identities=19%  Similarity=0.236  Sum_probs=27.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .++|+|+|+.|+.|+..|..+|. +|+.++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47889999999999999999998 99999864

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.26  E-value=0.18  Score=40.81  Aligned_cols=32  Identities=25%  Similarity=0.294  Sum_probs=27.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      -|+|+|+|+.|+.|+..|...|. +|++++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47899999999998888888998 899998643

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=89.24  E-value=1.5  Score=34.80  Aligned_cols=93  Identities=16%  Similarity=0.113  Sum_probs=61.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHh----hhcCCcE--EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg~~~--v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .||=+|+|. |..++.+|+..--..+++++.++.....+    ++.+.+.  ++..+.   ..+    .+......+|.|
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da---~~l----~~~~~~~~~d~v  103 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA---DTL----TDVFEPGEVKRV  103 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG---GGH----HHHCCTTSCCEE
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccch---hhh----hcccCchhhhcc
Confidence            567779874 88888999987444999999998877655    3456543  233221   222    222333368887


Q ss_pred             EEccCC--------------hhhHHHHHHhcccCCeEEEEEc
Q 017201          267 FECTGV--------------PSLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       267 id~~g~--------------~~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      +-....              +..+....+.|+|+ |.+....
T Consensus       104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T  144 (204)
T d2fcaa1         104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  144 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             ccccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence            654433              24788899999998 9887753

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.23  E-value=0.18  Score=40.43  Aligned_cols=30  Identities=30%  Similarity=0.331  Sum_probs=26.9

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      |+|+|+|+.|+.|+..|...|. +|++++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            7888999999999999999998 89999754

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=89.21  E-value=0.4  Score=39.71  Aligned_cols=101  Identities=11%  Similarity=-0.109  Sum_probs=65.5

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcEEeCCCCCCcccHHHHHHhhc-CCC
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGIT-HGM  261 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~~~i~~~~-~~~  261 (375)
                      ......++.+||=+|+|. |..+.++++..+. +|++++.+++-.+.+++. .....++...   .+    +.++. ...
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~---~d----~~~~~~~~~  157 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL---AS----METATLPPN  157 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE---SC----GGGCCCCSS
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE---cc----ccccccCCC
Confidence            445567788999999974 8888888877765 899999999888877653 2111111110   11    11222 233


Q ss_pred             CccEEEEccCC-----h---hhHHHHHHhcccCCeEEEEEc
Q 017201          262 GVDYCFECTGV-----P---SLLSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       262 g~d~vid~~g~-----~---~~~~~~~~~l~~~~G~iv~~g  294 (375)
                      .||+|+-.-.-     +   ..+..+.+.|+++ |.++...
T Consensus       158 ~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            69999765432     1   3477889999997 9888753

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=89.17  E-value=0.15  Score=42.28  Aligned_cols=101  Identities=15%  Similarity=0.077  Sum_probs=63.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc---EEeCCCCCCcccHHHHH
Q 017201          182 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISELV  254 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~~i  254 (375)
                      +.....+.+..+||=+|+| .|..+..+++...-.++++++. ++-.+.++    +.+..   .++.. +     +    
T Consensus        72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~-D-----~----  139 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-D-----F----  139 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-C-----T----
T ss_pred             HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc-c-----c----
Confidence            3445567888999999987 4888899999885448888885 44444333    33321   12211 1     1    


Q ss_pred             HhhcCCCCccEEEEccC-----Ch---hhHHHHHHhcccCCeEEEEEccC
Q 017201          255 KGITHGMGVDYCFECTG-----VP---SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       255 ~~~~~~~g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .+... .++|+|+-...     .+   ..+..+.+.|+|+ |+++.+...
T Consensus       140 ~~~~~-~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~~  187 (253)
T d1tw3a2         140 FEPLP-RKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHERD  187 (253)
T ss_dssp             TSCCS-SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             hhhcc-cchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEecc
Confidence            11112 26899875432     12   2478899999998 999887543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.08  E-value=0.63  Score=40.01  Aligned_cols=35  Identities=20%  Similarity=0.128  Sum_probs=27.2

Q ss_pred             CCEEEEECC---CHHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          191 GSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       191 g~~VlI~Ga---g~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      ++..||+|+   .++|.+.++.+...|+ +|+.+.++..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchh
Confidence            456788895   3899998888889999 8888876544

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=89.08  E-value=0.55  Score=35.58  Aligned_cols=93  Identities=20%  Similarity=0.101  Sum_probs=57.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC--CCeEEEEcCChhhHHHhhhcCCcE-EeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          191 GSSVAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~ai~la~~~G--~~~V~~~~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      |-+|.|+|| |-+|.-.++++..+.  ..++..++++...-.......... ..+..+   .+          ..+.|++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~---~~----------~~~~d~~   67 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE---TA----------FEGVDIA   67 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCT---TT----------TTTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccch---hh----------hhhhhhh
Confidence            458999999 999999999998774  335555554322222111111111 111111   11          1268999


Q ss_pred             EEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          267 FECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       267 id~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      +-+.+.....+.+...+..+ -+++..+...
T Consensus        68 f~~~~~~~s~~~~~~~~~~~-~~VIDlSsdf   97 (154)
T d2gz1a1          68 LFSAGSSTSAKYAPYAVKAG-VVVVDNTSYF   97 (154)
T ss_dssp             EECSCHHHHHHHHHHHHHTT-CEEEECSSTT
T ss_pred             hhccCccchhhHHhhhcccc-ceehhcChhh
Confidence            99998776667777777886 8888887554

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.02  E-value=0.19  Score=40.82  Aligned_cols=32  Identities=31%  Similarity=0.362  Sum_probs=28.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      -|+|+|+||.|+.|+..|...|. +|++++..+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            37889999999999999999998 899998654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.01  E-value=0.18  Score=39.82  Aligned_cols=32  Identities=16%  Similarity=0.078  Sum_probs=27.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ..|+|+|+|+.|+.|+..+.+.|. +|++++..
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            579999999999998888889998 88888743

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=88.95  E-value=0.26  Score=41.39  Aligned_cols=35  Identities=14%  Similarity=0.148  Sum_probs=26.0

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHH
Q 017201          194 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKE  229 (375)
Q Consensus       194 VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~-~~~~~  229 (375)
                      +||+|+ +++|.+.++.+...|+ +|+.+.++ +++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHH
Confidence            466688 8999998888888899 88876654 44433

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.85  E-value=0.25  Score=40.80  Aligned_cols=36  Identities=31%  Similarity=0.410  Sum_probs=32.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      .--.|.+|+|.|-|.+|..+++++...|+ +|++++.
T Consensus        27 ~~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            34588999999999999999999999999 8888774

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.69  E-value=0.3  Score=36.24  Aligned_cols=67  Identities=18%  Similarity=0.165  Sum_probs=41.8

Q ss_pred             CCCCCEEEEECCCHHHH-HHHHHH---HHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          188 VEKGSSVAVLGLGTVGL-GAVDGA---RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~-~ai~la---~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      ++++++++|+|+|.+|. +|..++   +..|. +|+.+..++.-+.  +.+         +   ++..+.+.+.....|+
T Consensus        34 ~~~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~-~Vt~i~~~~~~l~--~~~---------~---~~~~~~~~~~l~~~GV   98 (137)
T d1m6ia2          34 SREVKSITIIGGGFLGSELACALGRKARALGT-EVIQLFPEKGNMG--KIL---------P---EYLSNWTMEKVRREGV   98 (137)
T ss_dssp             HHHCSEEEEECCSHHHHHHHHHHHHHHHHHTC-EEEEECSSSSTTT--TTS---------C---HHHHHHHHHHHHTTTC
T ss_pred             hhcCCEEEEECCCHHHHHHHHHHHHHHHhcCC-EEEEecccccCCc--ccC---------C---HHHHHHHHHHHHhCCc
Confidence            45678999999999997 344444   45688 8998886543221  001         1   3455555555445577


Q ss_pred             cEEEEc
Q 017201          264 DYCFEC  269 (375)
Q Consensus       264 d~vid~  269 (375)
                      ++.+++
T Consensus        99 ~~~~~~  104 (137)
T d1m6ia2          99 KVMPNA  104 (137)
T ss_dssp             EEECSC
T ss_pred             EEEeCC
Confidence            777654

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.68  E-value=0.18  Score=43.03  Aligned_cols=32  Identities=19%  Similarity=0.322  Sum_probs=28.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .|+|+|||..|+.++..+...|. +|++++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            48999999999998888888898 999999654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.48  E-value=0.33  Score=38.72  Aligned_cols=40  Identities=25%  Similarity=0.414  Sum_probs=33.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      +|.|+|+|-+|+..+..+...|. +|++.+.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            58899999999976666667788 99999999998887764

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=88.37  E-value=0.45  Score=36.11  Aligned_cols=40  Identities=18%  Similarity=0.142  Sum_probs=33.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      ++-.+|.|+|+|.+|...+.++...+..+++.++.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            5568899999999998877777777766899999887664

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.37  E-value=0.18  Score=43.59  Aligned_cols=32  Identities=31%  Similarity=0.361  Sum_probs=25.3

Q ss_pred             EEEEECCCHHHHHHHHHH-----HHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGA-----RMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la-----~~~G~~~V~~~~~~~  225 (375)
                      -|+|+|+|++|++++.++     +..|. +|+++++++
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            489999999999766665     35688 899998654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=88.16  E-value=1.5  Score=33.61  Aligned_cols=74  Identities=9%  Similarity=0.173  Sum_probs=43.4

Q ss_pred             CCCEEEEECCCHHHHHH---HHHHH--HcCCCeEEEEcCChhhHHHh--------hhcCCcEEeCCCCCCcccHHHHHHh
Q 017201          190 KGSSVAVLGLGTVGLGA---VDGAR--MHGAAKIIGIDKNPWKKEKG--------KAFGMTDFINPDDEPNKSISELVKG  256 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~a---i~la~--~~G~~~V~~~~~~~~~~~~~--------~~lg~~~v~~~~~~~~~~~~~~i~~  256 (375)
                      |+-+|.|+|+|.+|...   ..+++  .+...+++.++.++++.+..        ..++...-+...    .+..+.+. 
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~----td~~eaL~-   75 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT----MNLDDVII-   75 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE----SCHHHHHT-
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe----CChhhccc-
Confidence            56789999999888542   22333  22234899999998886532        223332222111    13333331 


Q ss_pred             hcCCCCccEEEEccCCh
Q 017201          257 ITHGMGVDYCFECTGVP  273 (375)
Q Consensus       257 ~~~~~g~d~vid~~g~~  273 (375)
                           +.|+|+.+.+..
T Consensus        76 -----dad~Vv~~~~~g   87 (171)
T d1obba1          76 -----DADFVINTAMVG   87 (171)
T ss_dssp             -----TCSEEEECCCTT
T ss_pred             -----CCCeEeeecccc
Confidence                 689999887643

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.05  E-value=1.7  Score=33.27  Aligned_cols=100  Identities=18%  Similarity=0.241  Sum_probs=60.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhc----C---CcE-------EeCCCCC---CcccHHH
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAF----G---MTD-------FINPDDE---PNKSISE  252 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~l----g---~~~-------v~~~~~~---~~~~~~~  252 (375)
                      +|.|.|-|-+|.++.+.+...+. +|+++..   +.+.+.++-++    |   .+.       .++.+..   ...+..+
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            57899999999999998887888 7777753   23445554332    1   110       1111100   0001000


Q ss_pred             HHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          253 LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       253 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       + .+ ...++|+||||+|.-...+.+...+..+ .+-+.+..+.
T Consensus        81 -i-~W-~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~  121 (169)
T d1dssg1          81 -I-PW-SKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPS  121 (169)
T ss_dssp             -C-CH-HHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCC
T ss_pred             -C-Cc-cccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCc
Confidence             0 00 1127999999999766677888888876 6667776664

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.98  E-value=1.4  Score=31.83  Aligned_cols=91  Identities=12%  Similarity=0.068  Sum_probs=58.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  272 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g~  272 (375)
                      .++|.|.|.+|...++.++  +. .|++++.++++.+.++..|...+. .+.   .+ .+.+++..-. .++.++-+...
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~---~~-~~~L~~a~i~-~A~~vi~~~~~   72 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDP---TR-VSDLEKANVR-GARAVIVNLES   72 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCT---TS-HHHHHHTTCT-TCSEEEECCSS
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-ccc---CC-HHHHHHhhhh-cCcEEEEeccc
Confidence            5788899999987766653  44 678888899998888888876554 222   11 2334443333 68888888776


Q ss_pred             hhh---HHHHHHhcccCCeEEEEE
Q 017201          273 PSL---LSEALETTKVGKGKVIVI  293 (375)
Q Consensus       273 ~~~---~~~~~~~l~~~~G~iv~~  293 (375)
                      +..   +-...+.+.|. .+++..
T Consensus        73 d~~n~~~~~~~r~~~~~-~~iia~   95 (129)
T d2fy8a1          73 DSETIHCILGIRKIDES-VRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHHHCSS-SCEEEE
T ss_pred             hhhhHHHHHHHHHHCCC-ceEEEE
Confidence            532   23344556665 555544

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.90  E-value=0.23  Score=39.77  Aligned_cols=30  Identities=33%  Similarity=0.306  Sum_probs=26.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      |+|+|+|+-|+.|+..|...|. +|++++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999998 89999754

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=87.80  E-value=0.54  Score=37.19  Aligned_cols=91  Identities=24%  Similarity=0.255  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEE
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  266 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~v  266 (375)
                      .+.++++||=+|+|. |..+..+     . ++++++.+++-.+.+++.+...+....+    ++     .. ....||+|
T Consensus        33 ~~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~~d~~----~l-----~~-~~~~fD~I   95 (208)
T d1vlma_          33 CLLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLKGTAE----NL-----PL-KDESFDFA   95 (208)
T ss_dssp             HHCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEECBTT----BC-----CS-CTTCEEEE
T ss_pred             hhCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhccccccccccccccccc----cc-----cc-cccccccc
Confidence            346778999999863 5444443     2 6789999999999998876654332211    11     11 22369999


Q ss_pred             EEccC-----Ch-hhHHHHHHhcccCCeEEEEEcc
Q 017201          267 FECTG-----VP-SLLSEALETTKVGKGKVIVIGV  295 (375)
Q Consensus       267 id~~g-----~~-~~~~~~~~~l~~~~G~iv~~g~  295 (375)
                      +....     .+ ..++...+.|+++ |.++....
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            76543     22 3578899999997 98877643

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.75  E-value=0.66  Score=37.83  Aligned_cols=34  Identities=32%  Similarity=0.392  Sum_probs=28.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEc
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGA-RMHGAAKIIGID  222 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la-~~~G~~~V~~~~  222 (375)
                      --+|.+|+|.|.|.+|..+++++ +..|+ +|++++
T Consensus        28 ~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             CTTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            35789999999999999888876 57899 888876

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.73  E-value=0.26  Score=39.48  Aligned_cols=30  Identities=27%  Similarity=0.376  Sum_probs=26.9

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      |+|+|+|+.|+.|+..|..+|. +|++++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7888999999999999999998 89999754

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=87.52  E-value=4.5  Score=30.44  Aligned_cols=42  Identities=19%  Similarity=0.215  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhH
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKK  228 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~  228 (375)
                      ...+..+|.|+|+|.+|...+..+...| +.+++.++.++++.
T Consensus        16 ~~~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          16 ATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCCCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             ccCCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            3455679999999999998877777776 45799999887664

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.39  E-value=0.13  Score=39.64  Aligned_cols=107  Identities=19%  Similarity=0.126  Sum_probs=57.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhc----CCc----EEeCCCCCCcccHHHHHHhhcCCCC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAF----GMT----DFINPDDEPNKSISELVKGITHGMG  262 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~l----g~~----~v~~~~~~~~~~~~~~i~~~~~~~g  262 (375)
                      +|.|+|+ |-+|.+.++++... ++ ++++....+.....-+.+    +..    .+.+..+           ..  -..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~-~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~-----------~~--~~~   71 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGV-QLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLD-----------AV--KDD   71 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTE-ECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCST-----------TT--TTS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecccchhccchhhhhhccccCCceeeccHH-----------HH--hcc
Confidence            5788898 99999999988866 55 555544332221111111    110    0111111           01  126


Q ss_pred             ccEEEEccCChhhHHHHHHhcccCCeEEEEEccCCCccccchHHHhhcCCceE
Q 017201          263 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTL  315 (375)
Q Consensus       263 ~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~  315 (375)
                      +|++||.+... .....++..... ++=+.+|.++-....+....-..+.+.+
T Consensus        72 ~DViIDFs~p~-~~~~~~~~a~~~-~~~~ViGTTG~~~~~~~~i~~~a~~ipi  122 (162)
T d1diha1          72 FDVFIDFTRPE-GTLNHLAFCRQH-GKGMVIGTTGFDEAGKQAIRDAAADIAI  122 (162)
T ss_dssp             CSEEEECSCHH-HHHHHHHHHHHT-TCEEEECCCCCCHHHHHHHHHHTTTSCE
T ss_pred             cceEEEeccHH-HHHHHHHHHHhc-cceeEEecCCCcHHHHHHHHHHcCCCCE
Confidence            89999998655 555555555554 6777788776433333333333355544

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.36  E-value=0.2  Score=40.65  Aligned_cols=33  Identities=15%  Similarity=0.153  Sum_probs=26.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcC-------CCeEEEEcCCh
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHG-------AAKIIGIDKNP  225 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G-------~~~V~~~~~~~  225 (375)
                      -+|+|+|+|+.|++|+..+...|       + +|++.+..+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~-~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDM-AVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCE-EEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCC-ceEEEecCC
Confidence            47999999999998887777666       4 788887653

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.33  E-value=1.2  Score=38.00  Aligned_cols=105  Identities=18%  Similarity=0.197  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHh----hhcCCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~-~~G~~~V~~~~~~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ..+...++.|+|+|..+...++... ....++|.+.++++++.+.+    +..+.....+.        .+.+      .
T Consensus       121 a~~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~--------~~a~------~  186 (320)
T d1omoa_         121 ARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP--------AEEA------S  186 (320)
T ss_dssp             SCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC--------HHHH------T
T ss_pred             ccCCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch--------hhhh------c
Confidence            3345578899999999987666555 45777999999999887544    34444433321        1222      1


Q ss_pred             CccEEEEccCChh-hHHHHHHhcccCCeEEEEEccCCCccccchHHHh
Q 017201          262 GVDYCFECTGVPS-LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL  308 (375)
Q Consensus       262 g~d~vid~~g~~~-~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~  308 (375)
                      +.|+|+-++.+.+ .+.  ...++++ -.+..+|........++...+
T Consensus       187 ~aDiV~taT~s~~P~~~--~~~l~~G-~hv~~iGs~~p~~~Eld~~~~  231 (320)
T d1omoa_         187 RCDVLVTTTPSRKPVVK--AEWVEEG-THINAIGADGPGKQELDVEIL  231 (320)
T ss_dssp             SSSEEEECCCCSSCCBC--GGGCCTT-CEEEECSCCSTTCCCBCHHHH
T ss_pred             cccEEEEeccCcccccc--hhhcCCC-CeEeecCCccccccccCHHHh
Confidence            6899999887542 232  2468887 899999876544455665543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.31  E-value=0.28  Score=40.73  Aligned_cols=32  Identities=13%  Similarity=0.126  Sum_probs=26.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .|+|+|+|.+|++++..+...|. +|+++++++
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999987666666788 999999753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.24  E-value=0.24  Score=42.42  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=27.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      |+|+|+|..|+.++..++..|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999998888888898 899998543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=87.22  E-value=0.36  Score=39.73  Aligned_cols=35  Identities=29%  Similarity=0.405  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      ...+|+|+|+|++|..++..+...|..+++.++.+
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            45799999999999999999999999899999854

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.19  E-value=0.97  Score=37.97  Aligned_cols=101  Identities=14%  Similarity=0.150  Sum_probs=60.0

Q ss_pred             hcCCCCCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCcEE-eCCCCCCcccHHHHHHhh
Q 017201          185 EAKVEKGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF-INPDDEPNKSISELVKGI  257 (375)
Q Consensus       185 ~~~~~~g~~VlI~Ga--g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~~v-~~~~~~~~~~~~~~i~~~  257 (375)
                      ....++|++||=.-|  |+=..   ++|....-.+|++.+.++.|...++    .+|...+ +...+   .....    .
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~---~~~~~----~  166 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPSQ----W  166 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTHH----H
T ss_pred             ccCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc---cccch----h
Confidence            457899999998844  44333   3343333238999999999987664    5776432 22222   11111    1


Q ss_pred             cCCCCccEE-EEccCCh---------------------------hhHHHHHHhcccCCeEEEEEccC
Q 017201          258 THGMGVDYC-FECTGVP---------------------------SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       258 ~~~~g~d~v-id~~g~~---------------------------~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      .....||.| +|+-++.                           ..+..++.+++++ |+++..-.+
T Consensus       167 ~~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYsTCS  232 (284)
T d1sqga2         167 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATCS  232 (284)
T ss_dssp             HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEESC
T ss_pred             cccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEeeec
Confidence            223368886 6644332                           1566788888986 877755433

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.16  E-value=0.32  Score=39.28  Aligned_cols=32  Identities=19%  Similarity=0.216  Sum_probs=25.4

Q ss_pred             EEEEECCCHHHHHHHHHHH-H-cCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGAR-M-HGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~-~-~G~~~V~~~~~~~  225 (375)
                      +|+|+|+|+.|+.|++.++ + .|+ +|++.+..+
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~   36 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQL   36 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence            7999999999998877554 3 377 899998654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=87.15  E-value=1.1  Score=34.31  Aligned_cols=99  Identities=19%  Similarity=0.205  Sum_probs=57.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHhhhcCC-------cE-------EeCCCCC---CcccHHHH
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN--PWKKEKGKAFGM-------TD-------FINPDDE---PNKSISEL  253 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~--~~~~~~~~~lg~-------~~-------v~~~~~~---~~~~~~~~  253 (375)
                      +|.|.|-|-+|.++.+++..-+. +|+++...  .+.+.++.++..       ..       .++.+..   .+.+.   
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p---   77 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP---   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG---
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh---
Confidence            58899999999999988887788 78777643  233333322211       10       1111000   00111   


Q ss_pred             HHhhc-CCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          254 VKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       254 i~~~~-~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                       .++. ...++|+|+||+|.-...+.+...+..+ .+-|.+..+.
T Consensus        78 -~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  120 (168)
T d2g82a1          78 -KEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA  120 (168)
T ss_dssp             -GGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             -HHCcccccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence             1110 1237999999999765667777777765 5555666554

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=87.09  E-value=1.4  Score=37.39  Aligned_cols=57  Identities=16%  Similarity=0.196  Sum_probs=41.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHhhhcCCcEEe
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK--NPWKKEKGKAFGMTDFI  240 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~--~~~~~~~~~~lg~~~v~  240 (375)
                      +...+.+++.|+...+|.-|++++..|+.+|..-++++..  ++.|.+.++.+|+..+.
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            4455678887777677999999999999999843444332  35667777888887654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.05  E-value=0.69  Score=33.80  Aligned_cols=62  Identities=19%  Similarity=0.178  Sum_probs=49.2

Q ss_pred             hhhhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCC
Q 017201          182 AWKEAKVEKGSSVAVL-GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  243 (375)
Q Consensus       182 l~~~~~~~~g~~VlI~-Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~  243 (375)
                      +++.+++..-+.+++. ..-..-+++.++++.+|..++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            3466777777766665 4445567888999999988899999999999999999999998753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.99  E-value=0.29  Score=41.53  Aligned_cols=32  Identities=44%  Similarity=0.622  Sum_probs=27.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      -|+|+|+|..|+.++.-|...|+ +|++++..+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            48999999999998888888898 899998653

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.66  E-value=0.27  Score=39.80  Aligned_cols=31  Identities=26%  Similarity=0.380  Sum_probs=27.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      -|+|+|+|+.|+.|+..|...|. +|.+++..
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~-kV~viE~~   35 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDK-KVMVLDFV   35 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCC-CEEEECCC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            47899999999999999999999 89999843

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=86.51  E-value=3.3  Score=30.56  Aligned_cols=37  Identities=27%  Similarity=0.294  Sum_probs=29.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhH
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKK  228 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~  228 (375)
                      .+|.|+|+|.+|..++..+...+. .+++.++.++++.
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            478899999999987766666664 4799999887664

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=86.14  E-value=0.35  Score=40.83  Aligned_cols=36  Identities=19%  Similarity=0.260  Sum_probs=30.4

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCeEEEEcCChh
Q 017201          190 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPW  226 (375)
Q Consensus       190 ~g~~VlI~Ga-g--~~G~~ai~la~~~G~~~V~~~~~~~~  226 (375)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+.+.++++
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            6889999997 5  799998888888999 8988876543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=86.14  E-value=0.49  Score=37.20  Aligned_cols=88  Identities=19%  Similarity=0.172  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -.+.+|+|+|.|.+|...+++++.+|+ +|++.++......    .....   .     .++.+.++      ..|+|+-
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~----~~~~~---~-----~~l~ell~------~sDii~i  102 (188)
T d1sc6a1          42 ARGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLPL----GNATQ---V-----QHLSDLLN------MSDVVSL  102 (188)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCCC----TTCEE---C-----SCHHHHHH------HCSEEEE
T ss_pred             ccceEEEEeecccchhhhhhhcccccc-eEeeccccccchh----hhhhh---h-----hhHHHHHh------hccceee
Confidence            367899999999999999999999999 9999986533211    01111   1     12333332      3688877


Q ss_pred             ccCC-hh----hHHHHHHhcccCCeEEEEEccC
Q 017201          269 CTGV-PS----LLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~-~~----~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +..- ++    .-.+.++.++++ ..++.++..
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~-a~lIN~aRG  134 (188)
T d1sc6a1         103 HVPENPSTKNMMGAKEISLMKPG-SLLINASRG  134 (188)
T ss_dssp             CCCSSTTTTTCBCHHHHHHSCTT-EEEEECSCS
T ss_pred             cccCCcchhhhccHHHHhhCCCC-CEEEEcCcH
Confidence            6642 21    124677888887 888877644

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.09  E-value=0.39  Score=41.33  Aligned_cols=34  Identities=18%  Similarity=0.329  Sum_probs=25.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCh
Q 017201          192 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNP  225 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~  225 (375)
                      ++|+|+|||+.|++++..++..|. .+|++.++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            579999999999987755544332 2899998764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.95  E-value=0.42  Score=40.63  Aligned_cols=33  Identities=21%  Similarity=0.216  Sum_probs=28.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      ++|||+|+ |-+|...+..+...|+ +|+++++..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~   34 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARR   34 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            47999998 9999998888877899 999998754

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.92  E-value=3.3  Score=31.96  Aligned_cols=105  Identities=21%  Similarity=0.324  Sum_probs=65.5

Q ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCc--EEeCCCCCCcccHHHHHHhhcCC
Q 017201          184 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      +...+++|..+ |-++ |+=|+.. .+++. +. +|++++++++....++++-..  .++...-   .++.+.+..+.. 
T Consensus        12 ~~l~~~~g~~~-vD~T~G~GGhs~-~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f---~~~~~~l~~~~~-   83 (182)
T d1wg8a2          12 DLLAVRPGGVY-VDATLGGAGHAR-GILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAALGV-   83 (182)
T ss_dssp             HHHTCCTTCEE-EETTCTTSHHHH-HHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHTTC-
T ss_pred             HhcCCCCCCEE-EEeCCCCcHHHH-HHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHH---HHHHHHHHHcCC-
Confidence            44567888874 5554 5545543 44444 45 999999999988887764322  2333332   456665555433 


Q ss_pred             CCccEEEEccCC-h--------------hhHHHHHHhcccCCeEEEEEccCC
Q 017201          261 MGVDYCFECTGV-P--------------SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       261 ~g~d~vid~~g~-~--------------~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ..+|.|+=-.|- .              ..+..+...+.++ |+++.+...+
T Consensus        84 ~~vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fhs  134 (182)
T d1wg8a2          84 ERVDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFHS  134 (182)
T ss_dssp             SCEEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECSH
T ss_pred             CccCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEeccc
Confidence            378887543332 1              1467888899997 9988886543

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.83  E-value=0.39  Score=39.99  Aligned_cols=45  Identities=16%  Similarity=0.039  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      +..+|+++|=+|+|+ |...+..+...+. +|++++-++.-.+.+++
T Consensus        51 g~~~g~~vLDiGcG~-g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGSGP-TVYQLLSACSHFE-DITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETCTT-CCGGGTTGGGGCS-EEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEeccCC-CHHHHHHhcccCC-eEEEEeCCHHHHHHHHH
Confidence            566899999999976 4444444444454 89999999988887764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.79  E-value=0.55  Score=36.97  Aligned_cols=39  Identities=28%  Similarity=0.202  Sum_probs=32.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      +|.|+|.|-+|+..+.++ +.|+ +|++++.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            688999999998755544 4698 99999999999887764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.68  E-value=0.8  Score=34.50  Aligned_cols=39  Identities=10%  Similarity=0.069  Sum_probs=32.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017201          190 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK  228 (375)
Q Consensus       190 ~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~  228 (375)
                      |..+|.|+|+|.+|...+.++...+...++.++.++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            567899999999998877888888888999999877664

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.68  E-value=0.47  Score=37.68  Aligned_cols=69  Identities=20%  Similarity=0.322  Sum_probs=41.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      ++|||+|+ |-+|...++.+...|.. +|++..+++...  .     ..+- ...   .++.+....+ .+ ..|.|+.+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--~-----~~~~-~~~---~d~~~~~~~~-~~-~~d~vi~~   69 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--H-----PRLD-NPV---GPLAELLPQL-DG-SIDTAFCC   69 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--C-----TTEE-CCB---SCHHHHGGGC-CS-CCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--c-----cccc-ccc---cchhhhhhcc-cc-chheeeee
Confidence            68999999 99999988887777752 566666543211  0     0111 111   2333332222 22 68999999


Q ss_pred             cCCh
Q 017201          270 TGVP  273 (375)
Q Consensus       270 ~g~~  273 (375)
                      +|..
T Consensus        70 ~g~~   73 (212)
T d2a35a1          70 LGTT   73 (212)
T ss_dssp             CCCC
T ss_pred             eeee
Confidence            8753

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=85.36  E-value=1.2  Score=33.69  Aligned_cols=88  Identities=14%  Similarity=0.157  Sum_probs=56.2

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCeEEEE-cCChhhHHH-hhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          193 SVAVLGLGTVGLG-AVDGARMH-GAAKIIGI-DKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       193 ~VlI~Gag~~G~~-ai~la~~~-G~~~V~~~-~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      +|.|+|+|.+|.- .+...+.. +. +++++ ++++++.+. +++++... ++       ++.+ +.   .  .+|+|+-
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~-~~-------~~~~-l~---~--~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY-AD-------SLSS-LA---A--SCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB-CS-------SHHH-HH---T--TCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc-cc-------cchh-hh---h--hcccccc
Confidence            5889999999963 56666554 66 66554 455665543 45666542 21       2222 21   1  5899999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ++....+.+.+..++..+  +=+.+..+.
T Consensus        68 ~tp~~~h~~~~~~al~~g--k~V~~EKPl   94 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAG--VHVCVDKPL   94 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTT--CEEEEESSS
T ss_pred             cccchhcccccccccccc--ceeeccccc
Confidence            998777888888888875  445565443

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.22  E-value=0.13  Score=42.49  Aligned_cols=45  Identities=18%  Similarity=0.068  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  233 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  233 (375)
                      ...+|++||=+|+|+ |..+..+++.. +.+|++++.++.-.+.+++
T Consensus        48 ~~~~g~~vLDlGcG~-G~~~~~~~~~~-~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLIDIGSGP-TIYQVLAACDS-FQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEESSCTT-CCGGGTTGGGT-EEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCC-CHhHHHHhccc-cCcEEEecCCHHHHHHHHH
Confidence            456788999999874 54455555544 4489999999988887754

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.21  E-value=0.69  Score=32.15  Aligned_cols=25  Identities=36%  Similarity=0.397  Sum_probs=19.6

Q ss_pred             eeEEEEEeCCCCC----------CCCCCCEEEeec
Q 017201           69 GVGVVESAGDEVK----------EVKEGDIVIPTY   93 (375)
Q Consensus        69 ~~G~Vv~vG~~v~----------~~~~Gd~V~~~~   93 (375)
                      ..|+|+++|++..          .+++||+|+...
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~~   72 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSK   72 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEEC
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEcc
Confidence            4699999998742          378999998554

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.18  E-value=0.37  Score=41.16  Aligned_cols=32  Identities=41%  Similarity=0.644  Sum_probs=27.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      -|+|+|+|..|+.|+.-|...|+ +|++++..+
T Consensus        21 DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~~   52 (317)
T d1qo8a2          21 QVLVVGAGSAGFNASLAAKKAGA-NVILVDKAP   52 (317)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999998888888898 899998643

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=85.16  E-value=2.3  Score=36.24  Aligned_cols=103  Identities=16%  Similarity=0.120  Sum_probs=63.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEeCCCCC-------------------
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFINPDDE-------------------  245 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~~~~~~-------------------  245 (375)
                      -.+...|+...+|..|.+.+..|+..|. +++++..   +++|.+.++.+|++.+....+.                   
T Consensus        72 ~~~~~~vv~assGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~  150 (331)
T d1tdja1          72 EQKAHGVITASAGNHAQGVAFSSARLGV-KALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWV  150 (331)
T ss_dssp             SSCSSSCEEEECSSSHHHHHHHHHHTTC-CEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEEC
T ss_pred             hCCCCeeeecccchhHHHHHHhhccccc-cceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccc
Confidence            3455556666679999999999999999 5555543   3567778888998765433321                   


Q ss_pred             ---Cccc-------HHHHHHhhcCCCCccEEEEccCChhh---HHHHHHhcccCCeEEEEEc
Q 017201          246 ---PNKS-------ISELVKGITHGMGVDYCFECTGVPSL---LSEALETTKVGKGKVIVIG  294 (375)
Q Consensus       246 ---~~~~-------~~~~i~~~~~~~g~d~vid~~g~~~~---~~~~~~~l~~~~G~iv~~g  294 (375)
                         .+..       ...++.+.  ...+|.||-++|+...   +...++.+.+. .+++.+.
T Consensus       151 ~~~~~~~~~~g~~t~~~Ei~~q--~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve  209 (331)
T d1tdja1         151 PPFDHPMVIAGQGTLALELLQQ--DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVE  209 (331)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHH--CTTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             cccCChHHhhhhhhHHHHHHHh--cCCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEec
Confidence               0011       11122221  1258999988876543   34555566665 6777664

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.13  E-value=0.53  Score=39.71  Aligned_cols=34  Identities=29%  Similarity=0.436  Sum_probs=30.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          189 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       189 ~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      -.|.+|+|.|-|.+|..+++++...|+ +|++++.
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vsD   67 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGE   67 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEc
Confidence            468899999999999999999999999 8988873

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.09  E-value=0.43  Score=40.24  Aligned_cols=32  Identities=25%  Similarity=0.439  Sum_probs=24.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      .|+|+|+|.+|++++.-+...|.++|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999976555555686479999865

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.87  E-value=0.85  Score=34.05  Aligned_cols=92  Identities=16%  Similarity=0.055  Sum_probs=54.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEE
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  268 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid  268 (375)
                      -+|.|+|+ |-+|+-.++++..+  -..++..+.++...-+.+...+.+..+...+            ...-.+.|++|-
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~------------~~~~~~~d~vf~   70 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVD------------SFDFSSVGLAFF   70 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGG------------GCCGGGCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccch------------hhhhccceEEEe
Confidence            47999999 99999999988643  2336776665443322222222121111100            011236899999


Q ss_pred             ccCChhhHHHHHHhcccCCeEEEEEccC
Q 017201          269 CTGVPSLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       269 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      +.+.....+..-..+..+ .+++..+..
T Consensus        71 a~p~~~s~~~~~~~~~~g-~~VID~Ss~   97 (144)
T d2hjsa1          71 AAAAEVSRAHAERARAAG-CSVIDLSGA   97 (144)
T ss_dssp             CSCHHHHHHHHHHHHHTT-CEEEETTCT
T ss_pred             cCCcchhhhhccccccCC-ceEEeechh
Confidence            998775556666666775 777766543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.81  E-value=0.44  Score=39.62  Aligned_cols=31  Identities=29%  Similarity=0.416  Sum_probs=26.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      -|+|+|+|.+|++++.-+...|. +|++++..
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            38999999999987777777898 89999864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.76  E-value=0.74  Score=34.62  Aligned_cols=46  Identities=13%  Similarity=0.088  Sum_probs=37.4

Q ss_pred             hhhhhhhhhcCCCCCCEEEEE--CCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          177 TGYGAAWKEAKVEKGSSVAVL--GLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       177 ta~~~l~~~~~~~~g~~VlI~--Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      |....+  ..+..+++.|+|+  |+|-+|+-+++++...|. +|+.+...+
T Consensus        27 t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~   74 (156)
T d1djqa2          27 TPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVH   74 (156)
T ss_dssp             CHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             CHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC
Confidence            444433  4577889999998  779999999999999998 999998754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=84.68  E-value=0.57  Score=38.78  Aligned_cols=35  Identities=31%  Similarity=0.453  Sum_probs=31.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          188 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       188 ~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      --.|.+|+|.|-|.+|..+++++...|+ +|++++.
T Consensus        33 ~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEec
Confidence            3578999999999999999999999999 8888763

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.29  E-value=5.7  Score=28.99  Aligned_cols=37  Identities=30%  Similarity=0.487  Sum_probs=27.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHH
Q 017201          193 SVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKE  229 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~~~  229 (375)
                      +|.|+|+|.+|...+..+...+ +.+++.++.++++.+
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~   39 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAE   39 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeccccccc
Confidence            6889999999987666555554 448999998876643

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=84.28  E-value=0.41  Score=41.00  Aligned_cols=31  Identities=29%  Similarity=0.373  Sum_probs=27.3

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      |+|+|+|+.|+.|+.-|...|+ +|++++..+
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence            8999999999998888888899 899998654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=84.19  E-value=1.7  Score=35.88  Aligned_cols=73  Identities=16%  Similarity=0.182  Sum_probs=41.8

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEcc
Q 017201          194 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDK--NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  270 (375)
Q Consensus       194 VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~--~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~  270 (375)
                      |||+|+ |-+|...+..+...|..+|++++.  +..+.....++......+.     .++...+.....-...+.++...
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK-----EDFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH-----HHHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc-----hHHHHHHhhhhcccchhhhhhhc
Confidence            799988 999998777777778657888752  2222333333333222221     23344443333334677787665


Q ss_pred             C
Q 017201          271 G  271 (375)
Q Consensus       271 g  271 (375)
                      +
T Consensus        77 a   77 (307)
T d1eq2a_          77 A   77 (307)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=84.15  E-value=2.2  Score=34.40  Aligned_cols=96  Identities=9%  Similarity=0.062  Sum_probs=56.9

Q ss_pred             CEEEEECCCHH----HHHHHHHHHHc--CCCeEEEE-cCChhhHH-HhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCc
Q 017201          192 SSVAVLGLGTV----GLGAVDGARMH--GAAKIIGI-DKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  263 (375)
Q Consensus       192 ~~VlI~Gag~~----G~~ai~la~~~--G~~~V~~~-~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~  263 (375)
                      =+|.|+|+|..    +...+...+..  ++ +++++ ++++++.+ .+++++....-.+.     ++.+.+.    ...+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~----~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFD-----SLESFAQ----YKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEES-----CHHHHHH----CTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeec-----chhhccc----cccc
Confidence            57899998653    33334444443  45 77754 55665554 35667654322222     2333322    3379


Q ss_pred             cEEEEccCChhhHHHHHHhcccC----CeEEEEEccCC
Q 017201          264 DYCFECTGVPSLLSEALETTKVG----KGKVIVIGVGV  297 (375)
Q Consensus       264 d~vid~~g~~~~~~~~~~~l~~~----~G~iv~~g~~~  297 (375)
                      |+|+.++....+.+.+..+|..+    .++=+.+..+-
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl  124 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL  124 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence            99999998877778888887653    03456776554

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=84.08  E-value=2.1  Score=36.73  Aligned_cols=107  Identities=21%  Similarity=0.215  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCChhhHHHh-hh----cCCcEEeCCCCCCcccHHHHHHhhcCC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVD-GARMHGAAKIIGIDKNPWKKEKG-KA----FGMTDFINPDDEPNKSISELVKGITHG  260 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~-la~~~G~~~V~~~~~~~~~~~~~-~~----lg~~~v~~~~~~~~~~~~~~i~~~~~~  260 (375)
                      ..+...++.|+|+|..+...++ ++..++.++|.+.++++++.+.+ +.    +|..... .     .+..+.++     
T Consensus       124 A~~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~-~-----~s~~eav~-----  192 (340)
T d1x7da_         124 ARPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRR-A-----SSVAEAVK-----  192 (340)
T ss_dssp             SCTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEE-C-----SSHHHHHT-----
T ss_pred             hccCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCcee-c-----CCHHHHHh-----
Confidence            3455678999999999887666 44567888999999998876533 32    2433222 1     23444442     


Q ss_pred             CCccEEEEccCCh---hhHHHHHHhcccCCeEEEEEccCCCccccchHHHh
Q 017201          261 MGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL  308 (375)
Q Consensus       261 ~g~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~  308 (375)
                       +.|+|+-++.+.   +.+.  ...++++ -.+..+|........++...+
T Consensus       193 -~ADIi~t~Tas~s~~Pv~~--~~~l~pG-~hI~aiGs~~p~~~Eld~~~l  239 (340)
T d1x7da_         193 -GVDIITTVTADKAYATIIT--PDMLEPG-MHLNAVGGDCPGKTELHADVL  239 (340)
T ss_dssp             -TCSEEEECCCCSSEEEEEC--GGGCCTT-CEEEECSCCBTTBEEECHHHH
T ss_pred             -cCCceeeccccCCCCcccc--hhhcCCC-CEEeecccchhhhhccCHHHH
Confidence             689999877543   1222  2578887 888888876544455555544

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=83.97  E-value=1.2  Score=33.42  Aligned_cols=69  Identities=13%  Similarity=0.104  Sum_probs=42.8

Q ss_pred             CCCCEEEEECC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhh----hcCCc---EEeCCCCCCcccHHHHHHhhcC
Q 017201          189 EKGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       189 ~~g~~VlI~Ga--g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      -.|.+||=.++  |.+|+   ..+ ..|+++|+.++.+++-.+.++    .++..   .++..      +..+.+.. ..
T Consensus        13 ~~g~~vlDl~~GtG~~~i---ea~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~------D~~~~l~~-~~   81 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI---EAV-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM------EAERAIDC-LT   81 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH---HHH-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS------CHHHHHHH-BC
T ss_pred             CCCCeEEEcCCccCHHHH---HHH-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc------cccccccc-cc
Confidence            46889888865  55555   333 468789999999988776654    34542   23332      34444433 23


Q ss_pred             CCCccEEEEc
Q 017201          260 GMGVDYCFEC  269 (375)
Q Consensus       260 ~~g~d~vid~  269 (375)
                       ..||+||--
T Consensus        82 -~~fDiIf~D   90 (152)
T d2esra1          82 -GRFDLVFLD   90 (152)
T ss_dssp             -SCEEEEEEC
T ss_pred             -cccceeEec
Confidence             379998753

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.91  E-value=0.45  Score=40.65  Aligned_cols=32  Identities=44%  Similarity=0.693  Sum_probs=27.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      -|+|+|+|..|+.++.-|...|+ +|++++..+
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~-~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGA-KVILLEKEP   56 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999988888888898 899998654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.36  E-value=1.1  Score=38.39  Aligned_cols=30  Identities=30%  Similarity=0.212  Sum_probs=26.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGID  222 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~  222 (375)
                      ++|||+|+ |-+|...+..+...|. +|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999998 9999988888888898 899885

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.26  E-value=0.15  Score=39.61  Aligned_cols=132  Identities=18%  Similarity=0.168  Sum_probs=67.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|+|+|+|.+|..-+...+.. +...+.+++....+ +........    .     .++.+.+    ....+|+|+-++.
T Consensus         9 kv~iIG~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~-----~~~~e~l----~~~~iD~V~I~tp   74 (172)
T d1lc0a1           9 GVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR-ELGSLDEVR----Q-----ISLEDAL----RSQEIDVAYICSE   74 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS-CCCEETTEE----B-----CCHHHHH----HCSSEEEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCcEEEEEeccchH-HHHHhhccC----c-----CCHHHHH----hCCCcchhhhccc
Confidence            689999999998755554433 22123333221111 111111111    1     1232222    2347999999998


Q ss_pred             ChhhHHHHHHhcccCCeEEEEEccCCC-ccc-cchHHHh-hcCCceEEEEeeccccCCCCHHHHHHHHHcCCCC
Q 017201          272 VPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  342 (375)
Q Consensus       272 ~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (375)
                      ...+.+.+..++..+  +=+.+..+.. ... ......+ ..+++.+.-..  ..++...+..+.+++.+|.+.
T Consensus        75 ~~~H~~~~~~al~~g--k~V~~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~--~~r~~p~~~~~k~~i~~~~lG  144 (172)
T d1lc0a1          75 SSSHEDYIRQFLQAG--KHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEH--VELLKNIFLKDQDIFVQKLLD  144 (172)
T ss_dssp             GGGHHHHHHHHHHTT--CEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEEC--GGGGTTHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccccc--hhhhcCCCccccHHHHHHHHHHHHHcCCeEEEec--HHHhhHHHHHHHHHHHcCCCC
Confidence            877888888888875  4466765542 111 1111112 12344432221  234455677777888776654

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.21  E-value=3  Score=35.36  Aligned_cols=55  Identities=25%  Similarity=0.251  Sum_probs=40.3

Q ss_pred             hhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc---CChhhHHHhhhcCCcEE
Q 017201          184 KEAKVEKGSSVAVL-GLGTVGLGAVDGARMHGAAKIIGID---KNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       184 ~~~~~~~g~~VlI~-Gag~~G~~ai~la~~~G~~~V~~~~---~~~~~~~~~~~lg~~~v  239 (375)
                      +...++++...+|. .+|..|++.+.+|+.+|. +++++.   .++.|.+.++.+|++.+
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~-~~~iv~p~~~~~~k~~~i~~~Ga~vi  115 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGY-KLIITMPASMSTERRIILLAFGVELV  115 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhcc-ceEEeehhhhhhhhhhhhhccCcceE
Confidence            44556666665555 569999999999999998 555444   34677888888998654

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=83.15  E-value=0.54  Score=41.43  Aligned_cols=32  Identities=22%  Similarity=0.444  Sum_probs=24.8

Q ss_pred             EEEEECCCHHHHHH-HHHHHH-----cCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGA-VDGARM-----HGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~a-i~la~~-----~G~~~V~~~~~~~  225 (375)
                      -|+|+|+|+.|++| +.||++     .|. +|+++++..
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl-~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCC-EEEEEcCCC
Confidence            58999999999865 455552     688 999999653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=83.10  E-value=1.7  Score=37.66  Aligned_cols=31  Identities=23%  Similarity=0.185  Sum_probs=25.0

Q ss_pred             CCEEEEECC-CHHHHH-HHHHHHHcCCCeEEEEc
Q 017201          191 GSSVAVLGL-GTVGLG-AVDGARMHGAAKIIGID  222 (375)
Q Consensus       191 g~~VlI~Ga-g~~G~~-ai~la~~~G~~~V~~~~  222 (375)
                      +.+|||+|+ |-+|.. +-+|++..|+ +|++++
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEe
Confidence            568999988 999975 5566677898 899986

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=83.04  E-value=0.58  Score=38.57  Aligned_cols=30  Identities=33%  Similarity=0.503  Sum_probs=26.9

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 017201          194 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  224 (375)
Q Consensus       194 VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~  224 (375)
                      |+|+|+|+.|+.|+..|...|. +|..++..
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~-~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNA-KVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence            6888999999999999999999 89999864

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=83.03  E-value=1.4  Score=38.67  Aligned_cols=54  Identities=24%  Similarity=0.234  Sum_probs=41.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHhhhcCCcEEeC
Q 017201          187 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFIN  241 (375)
Q Consensus       187 ~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lg~~~v~~  241 (375)
                      ++++|.+|+-..+|..|++.+.+|+.+|. +++++..   +++|.+.++.+|++.+..
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGi-k~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGY-RARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTC-EEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCC-CEEEEeeccccccccccccccCcceeec
Confidence            56788775555669999999999999999 6655553   467788889999987653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.86  E-value=2.9  Score=32.59  Aligned_cols=109  Identities=18%  Similarity=0.161  Sum_probs=65.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhh----cCCcE-EeCCCCCCcccHHHHHHhh
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD-FINPDDEPNKSISELVKGI  257 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lg~~~-v~~~~~~~~~~~~~~i~~~  257 (375)
                      .+...+++|+.++=.++|.=|+ +-.+++...-.+|++++.+++-.+.+++    ++... ++...-   .++...+..+
T Consensus        16 i~~l~~~~~~~~lD~t~G~Ggh-s~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f---~~~~~~~~~~   91 (192)
T d1m6ya2          16 IEFLKPEDEKIILDCTVGEGGH-SRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLKTL   91 (192)
T ss_dssp             HHHHCCCTTCEEEETTCTTSHH-HHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHHHT
T ss_pred             HHhhCCCCCCEEEEecCCCcHH-HHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHH---hhHHHHHHHc
Confidence            3455788888764444454344 3455555433399999999998887764    33222 333322   3444444444


Q ss_pred             cCCCCccEE-EEccCCh--------------hhHHHHHHhcccCCeEEEEEccCC
Q 017201          258 THGMGVDYC-FECTGVP--------------SLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       258 ~~~~g~d~v-id~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ..+ .+|.| +|..-+.              ..+..+...|+++ |+++.+...+
T Consensus        92 ~~~-~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~s  144 (192)
T d1m6ya2          92 GIE-KVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFHS  144 (192)
T ss_dssp             TCS-CEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESSH
T ss_pred             CCC-CcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeecccc
Confidence            333 78887 4532211              3577788899997 9988876443

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=82.64  E-value=0.79  Score=37.23  Aligned_cols=34  Identities=15%  Similarity=0.116  Sum_probs=28.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK  227 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~  227 (375)
                      -|+|+|+|+.|+-|+..|.++|+ ++..++.+.+.
T Consensus         4 DVIVIGgG~AG~eAA~~aAR~G~-ktllit~~~~~   37 (230)
T d2cula1           4 QVLIVGAGFSGAETAFWLAQKGV-RVGLLTQSLDA   37 (230)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEEESCGGG
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEEeccch
Confidence            37888999999999999999999 78888766443

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.53  E-value=5.3  Score=30.31  Aligned_cols=100  Identities=19%  Similarity=0.228  Sum_probs=56.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc---CCCeEEEEcC--ChhhHHHhhhc----C---CcE-------EeCCCCC---Cccc
Q 017201          192 SSVAVLGLGTVGLGAVDGARMH---GAAKIIGIDK--NPWKKEKGKAF----G---MTD-------FINPDDE---PNKS  249 (375)
Q Consensus       192 ~~VlI~Gag~~G~~ai~la~~~---G~~~V~~~~~--~~~~~~~~~~l----g---~~~-------v~~~~~~---~~~~  249 (375)
                      .+|.|.|-|-+|.++.+.+...   .. +|+++..  +.+.+.++-++    |   .+.       +++.+..   ...+
T Consensus         1 ~kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           1 ARVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            3688999999999988877643   35 7777753  23444444322    1   110       1111110   0001


Q ss_pred             HHH-HHHhhcCCCCccEEEEccCChhhHHHHHHhcccCCeEEEEEccCC
Q 017201          250 ISE-LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  297 (375)
Q Consensus       250 ~~~-~i~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  297 (375)
                      ..+ .+.    ..++|+||||+|.-...+.+...+..+ .+-+.+..+.
T Consensus        80 p~~i~W~----~~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~  123 (169)
T d1hdgo1          80 PSKLPWK----DLGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPA  123 (169)
T ss_dssp             GGGSCHH----HHTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             hhhCCcc----ccCCCEEEEecceeccccchhhhccCC-CceEEEeccc
Confidence            100 011    127999999999765667777788775 5556666664

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=82.38  E-value=0.53  Score=39.15  Aligned_cols=61  Identities=20%  Similarity=0.319  Sum_probs=36.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEccC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  271 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~~g  271 (375)
                      +|||+|+ |-+|...+..+...|  +++++++....      +-    .|-.+  .+.+.+.++.    .++|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~------~~----~Dl~~--~~~~~~~i~~----~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKE------FC----GDFSN--PKGVAETVRK----LRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSS------SC----CCTTC--HHHHHHHHHH----HCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCcc------cc----CcCCC--HHHHHHHHHH----cCCCEEEEecc
Confidence            6999998 999998877776666  45555544321      11    12112  1223333332    26899999886

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=82.22  E-value=7  Score=28.57  Aligned_cols=35  Identities=31%  Similarity=0.342  Sum_probs=25.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCChhh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWK  227 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G-~~~V~~~~~~~~~  227 (375)
                      +|.|+|+|.+|...+..+...+ +.+++.++.++++
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            6889999999998776666665 3479999987765

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.82  E-value=4.9  Score=33.41  Aligned_cols=56  Identities=16%  Similarity=0.141  Sum_probs=39.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHhhhcCCcEE
Q 017201          184 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID--KNPWKKEKGKAFGMTDF  239 (375)
Q Consensus       184 ~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~--~~~~~~~~~~~lg~~~v  239 (375)
                      +....++|..|...++|.-|.+++..|+.+|.+-++.+.  .++.+...++.+|++.+
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~  111 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV  111 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence            445677777777667799999999999999984333333  34566677777777554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=81.75  E-value=2.8  Score=36.00  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=24.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          193 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      +|||+|+ |-+|...+..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999988 999998888887788845666653

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=81.63  E-value=1  Score=35.59  Aligned_cols=73  Identities=26%  Similarity=0.398  Sum_probs=46.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHhhhc-CCcEEeCCCCCCcccHHHHHHhhcCCC
Q 017201          183 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGITHGM  261 (375)
Q Consensus       183 ~~~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~~~i~~~~~~~  261 (375)
                      ....++ .|++||=.|+|. |.+++. |...|+++|++++.+++..+.+++- ....++..+      +    .++ ++ 
T Consensus        42 ~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D------~----~~l-~~-  106 (197)
T d1ne2a_          42 YNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD------V----SEI-SG-  106 (197)
T ss_dssp             HHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC------G----GGC-CC-
T ss_pred             HHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEe------h----hhc-CC-
Confidence            344444 699999998863 555554 4446776899999999988887753 222333221      1    122 23 


Q ss_pred             CccEEEEcc
Q 017201          262 GVDYCFECT  270 (375)
Q Consensus       262 g~d~vid~~  270 (375)
                      .||+||-.-
T Consensus       107 ~fD~Vi~NP  115 (197)
T d1ne2a_         107 KYDTWIMNP  115 (197)
T ss_dssp             CEEEEEECC
T ss_pred             cceEEEeCc
Confidence            699998653

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=81.43  E-value=0.72  Score=38.00  Aligned_cols=32  Identities=22%  Similarity=0.302  Sum_probs=27.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~VlI~Gag~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      .++|+|+|+.|+.++..+..+|. +|+++...+
T Consensus        44 DvvVIGgG~aG~~aA~~~a~~G~-kv~vve~~~   75 (261)
T d1mo9a1          44 DAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWP   75 (261)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            48888999999999999999998 888887643

>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At5g11950
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.40  E-value=3.4  Score=31.82  Aligned_cols=84  Identities=18%  Similarity=0.127  Sum_probs=45.9

Q ss_pred             CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCChhhHHHhhhcCCcEEeCCCCCCcccHHHHHHhhcCCCCccEEEEc
Q 017201          192 SSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  269 (375)
Q Consensus       192 ~~VlI~Gag~~G~~--ai~la~~~G~~~V~~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vid~  269 (375)
                      ..-+|+|+|+.|+|  +.+-++..|. +|+.+....-.......-..+..+..     .++.++...+...  -|.+|-.
T Consensus        34 g~~lv~GGG~~GlMga~a~ga~~~gg-~viGv~~~~l~~~e~~~~~~~~~~~~-----~~~~~Rk~~m~~~--sdafIvl  105 (181)
T d1ydhb_          34 KIDLVYGGGSVGLMGLISRRVYEGGL-HVLGIIPKALMPIEISGETVGDVRVV-----ADMHERKAAMAQE--AEAFIAL  105 (181)
T ss_dssp             TCEEEECCCSSHHHHHHHHHHHHTTC-CEEEEEEGGGHHHHCCSCCCSEEEEE-----SSHHHHHHHHHHH--CSEEEEC
T ss_pred             CCeEEECCCchHHHHHHHHhHhhcCC-cccccchhhhhhhhcCCcccCcceee-----ccHHHHHHHHHHh--CeeEEEe
Confidence            44567888777775  5566677777 88888644211111111122333322     2355444444332  4777766


Q ss_pred             cCChhhHHHHHHhc
Q 017201          270 TGVPSLLSEALETT  283 (375)
Q Consensus       270 ~g~~~~~~~~~~~l  283 (375)
                      -|+-.++.+.+..+
T Consensus       106 PGG~GTLdEl~e~l  119 (181)
T d1ydhb_         106 PGGYGTMEELLEMI  119 (181)
T ss_dssp             SCSHHHHHHHHHHH
T ss_pred             CCccchHHHHHHHH
Confidence            77766677666665

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=81.22  E-value=0.91  Score=38.23  Aligned_cols=31  Identities=19%  Similarity=0.225  Sum_probs=25.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 017201          192 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  223 (375)
Q Consensus       192 ~~VlI~Ga-g~~G~~ai~la~~~G~~~V~~~~~  223 (375)
                      ++|||+|+ |-+|...++.+...|. .+++++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecC
Confidence            37999998 9999998888888888 7777654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.07  E-value=2.6  Score=31.26  Aligned_cols=90  Identities=14%  Similarity=0.121  Sum_probs=47.4

Q ss_pred             EEEEECC-CHHHHHHHH-HHHHc--CCCeEEEEcCChhhHHHhhhcCC-cEEeCCCCCCcccHHHHHHhhcCCCCccEEE
Q 017201          193 SVAVLGL-GTVGLGAVD-GARMH--GAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCF  267 (375)
Q Consensus       193 ~VlI~Ga-g~~G~~ai~-la~~~--G~~~V~~~~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~i~~~~~~~g~d~vi  267 (375)
                      +|.|+|| |.+|+-.++ |+.+.  -..+++...++..........+- ..+.+..     +... +      .++|++|
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~-----~~~~-~------~~~DivF   70 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAF-----DLEA-L------KALDIIV   70 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETT-----CHHH-H------HTCSEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeeccc-----chhh-h------hcCcEEE
Confidence            7899999 999998887 45432  44467766655433221111111 1111111     1111 1      2699999


Q ss_pred             EccCChhhHHHHHHhcccCC-eEEEEEc
Q 017201          268 ECTGVPSLLSEALETTKVGK-GKVIVIG  294 (375)
Q Consensus       268 d~~g~~~~~~~~~~~l~~~~-G~iv~~g  294 (375)
                      -+.+.......+-.+...+. ..++..+
T Consensus        71 ~a~~~~~s~~~~~~~~~~g~~~~VID~S   98 (146)
T d1t4ba1          71 TCQGGDYTNEIYPKLRESGWQGYWIDAA   98 (146)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred             EecCchHHHHhhHHHHhcCCCeecccCC
Confidence            99987744444444444431 2355544

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.65  E-value=4.5  Score=31.96  Aligned_cols=107  Identities=15%  Similarity=-0.032  Sum_probs=61.0

Q ss_pred             hhhhhhhhcCCCCCCEEEEE-CCC---HHHHHHHHHHHHcCCCeEEEEcCChhhH-------HHhhhcCCcEEeCCCCCC
Q 017201          178 GYGAAWKEAKVEKGSSVAVL-GLG---TVGLGAVDGARMHGAAKIIGIDKNPWKK-------EKGKAFGMTDFINPDDEP  246 (375)
Q Consensus       178 a~~~l~~~~~~~~g~~VlI~-Gag---~~G~~ai~la~~~G~~~V~~~~~~~~~~-------~~~~~lg~~~v~~~~~~~  246 (375)
                      ++..+.+..+-....+|+|+ |.|   +=|+.+++.++..|+ +|.++...+.+.       +..++++...+ +..+  
T Consensus        27 ~a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--  102 (211)
T d2ax3a2          27 VVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVK-DVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQFE--  102 (211)
T ss_dssp             HHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSS-EEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCCC--
T ss_pred             HHHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCC-eeEEEecCccCCcHHHHHHHHHHHcCCccc-cccc--
Confidence            33334444333345677777 654   556777788888898 777666443222       22234454432 2211  


Q ss_pred             cccHHHHHHhhcCCCCccEEEEccCCh-------hhHHHHHHhcccCCeEEEEEccCCC
Q 017201          247 NKSISELVKGITHGMGVDYCFECTGVP-------SLLSEALETTKVGKGKVIVIGVGVD  298 (375)
Q Consensus       247 ~~~~~~~i~~~~~~~g~d~vid~~g~~-------~~~~~~~~~l~~~~G~iv~~g~~~~  298 (375)
                       ..         .-..+|++||+.-+.       ..+...++.++.....++.+..+++
T Consensus       103 -~~---------~~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG  151 (211)
T d2ax3a2         103 -PS---------ILNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG  151 (211)
T ss_dssp             -GG---------GGGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred             -cc---------cccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence             11         012689999998321       2456677777665467888887776

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.38  E-value=0.82  Score=39.12  Aligned_cols=32  Identities=22%  Similarity=0.290  Sum_probs=27.8

Q ss_pred             EE-EEECC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 017201          193 SV-AVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  225 (375)
Q Consensus       193 ~V-lI~Ga-g~~G~~ai~la~~~G~~~V~~~~~~~  225 (375)
                      +| ||+|+ |-+|...+..+...|+ +|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57 99998 9999988888888899 999999754

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.10  E-value=2.4  Score=36.00  Aligned_cols=103  Identities=19%  Similarity=0.235  Sum_probs=59.7

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHhh----hcCCcEEeCCCCCCcccHHHHHHhhcC
Q 017201          185 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITH  259 (375)
Q Consensus       185 ~~~~~~g~~VlI~Gag~~G~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~i~~~~~  259 (375)
                      ...+++|++||=.-|++=| =+.+++..++. ..+++.+.++.|...++    .+|...++.... +...+     ... 
T Consensus       111 ~l~~~~g~~vlD~CAapGg-Kt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~-d~~~~-----~~~-  182 (313)
T d1ixka_         111 ALDPKPGEIVADMAAAPGG-KTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS-SSLHI-----GEL-  182 (313)
T ss_dssp             HHCCCTTCEEEECCSSCSH-HHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS-CGGGG-----GGG-
T ss_pred             cccCCccceeeecccchhh-hhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccc-ccccc-----ccc-
Confidence            4578999998877332212 23344544432 27999999999987653    466654432222 00111     111 


Q ss_pred             CCCccEE-EEcc--CCh-------------------------hhHHHHHHhcccCCeEEEEEccC
Q 017201          260 GMGVDYC-FECT--GVP-------------------------SLLSEALETTKVGKGKVIVIGVG  296 (375)
Q Consensus       260 ~~g~d~v-id~~--g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~  296 (375)
                      ...||.| +|+-  |..                         +.+..++.+++++ |++|..-.+
T Consensus       183 ~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYsTCS  246 (313)
T d1ixka_         183 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTCS  246 (313)
T ss_dssp             CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             cccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEeecc
Confidence            2368876 5544  321                         1567799999997 887765444