Citrus Sinensis ID: 017257

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
Protein Sequence
MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI
Secondary Structure (PSIPRED)
cHHHHHHccccccccccccccccHHHHHccEEEccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHcccEEcccEEccccccccccccccEEEEEccHHHHHHHHHHcHHHHHHHHHccEEEEcccccccccccccccccccccccEEEEcccccccHHHcccHHccccccccEEccccccccccccccccccccccccccEEEEEEEEEEcccccccccccccccccccEEEEEEEEcccccccccccccccccccccccEEEEEEEcccEEEEEEEEEEccccccccEEEEEEEEcccccccccEEEcccccccccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHcccccccccccccHHHHcccEEEEcccccHHHHHccccccccccccccccccHHHccccccccccHHHHHHcccccccccccccccccccHHHHHcHHHHHHHHEEccccccccHHHcccccccEEEEcccHHHHHHHHHHcccHHHHHcHHHHHHEcccccEEccccccHHHHHHHccEEEEEEccccccccEHHcccEcccccccEEEcHHHHccccccccccccccccccccEEEEEEEEEccccccccccccccccccccEEEEEEEEccccHHHHHccEEccccccccccEEEEEEEcccEEEEEEEEEEccccccccccccEEccHHHcccccEEEEccccccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
MVTQTLGEIlftpgseclkefpspeslkrriiistkppkeyleakeekekendsqrgkgsadeeawgkevpnlkslnnsacdkddfdggvdndeedsddksqhneapEYRKLIAIhagkpkgglkeclkvdpdkvrrlSLSEQQLENAvgtygndiVRFTQRNLlriypkgirvdssnynpligwsHGAQMVAFNMQGHGRSLWLMHGMfranggcgyvkkpnfllqtgphnevfdpkvklpakktLKVTVYMgegwyydfphthfdaysppdfyarvgiagvpadtvMKKTKtlednwipswneefefplsvpELALLRIEVHeydmsekddfggqtclpvselkqgiravplhdrkgerykSVKLLMHFEFI
Flexible Loop (DISEMBL)
mvtqtlgeilftpgseclkefpspeslkrriiistkppkeyleakeekekendsqrgkgsadeeawgkevpnlkslnnsacDKDDFDGGVDNdeedsddksqhneaPEYRKLIAihagkpkgglkeCLKVDPDKVRRLSLSEQqlenavgtygndivrFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNevfdpkvklpakkTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELkqgiravplhdrkgeryksvkllmhfefi
Low Complexity Region (SEG)
MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTkppkeyleakeekekeNDSQRGKGSADEEAWGKEVPNLKSLNNSACdkddfdggvdndeedSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI
Disordered region (IsUnstruct)
********ILF****************************************************************************************************LIAIHAG***GGLKECLKVD************QLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF***
Disordered Region (DISOPRED)
MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTK***********************************************************************EYRKLIAIHAGKPKGGLK*CLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPH***FDPK*KLPAKKTLKVTVYMGEGW*************PPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI
Disordered Region (DISEMBL)
MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYL**********************AWGKEVPNLKSLNNSACDKDDFDGGV*************NEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI
Disordered Region (DISPRO)
MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPK**L*********************************************************KSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	374	2.2.26 [Sep-21-2011]
Q39033	581	Phosphoinositide phosphol	yes	no	0.986	0.635	0.733	1e-155
Q9LY51	584	Phosphoinositide phosphol	no	no	0.978	0.626	0.687	1e-148
Q8GV43	613	Phosphoinositide phosphol	no	no	0.981	0.598	0.643	1e-142
Q944C1	597	Phosphoinositide phosphol	no	no	0.986	0.618	0.624	1e-138
Q944C2	578	Phosphoinositide phosphol	no	no	0.957	0.619	0.556	1e-115
Q39032	561	Phosphoinositide phosphol	no	no	0.914	0.609	0.559	1e-113
Q56W08	564	Phosphoinositide phosphol	no	no	0.909	0.602	0.537	1e-106
Q9STZ3	531	Phosphoinositide phosphol	no	no	0.852	0.600	0.396	4e-70
Q6NMA7	531	Phosphoinositide phosphol	no	no	0.831	0.585	0.390	9e-65
Q8K2J0	785	1-phosphatidylinositol 4,	yes	no	0.609	0.290	0.371	4e-36

>sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1

 Score =  549 bits (1415), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 275/375 (73%), Positives = 309/375 (82%), Gaps = 6/375 (1%)

Query: 1   MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 59
           MVT+  GEILFTP   E LKEFPSP SLKRRIIISTKPPKEY E K+ +      Q+GK 
Sbjct: 212 MVTEIFGEILFTPPVGESLKEFPSPNSLKRRIIISTKPPKEYKEGKDVEV----VQKGKD 267

Query: 60  SADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGK 119
             DEE WG+EVP+    N S   KDD DG  D+D++D +DKS+ N  P+Y+ LIAIHAGK
Sbjct: 268 LGDEEVWGREVPSFIQRNKSEA-KDDLDGNDDDDDDDDEDKSKINAPPQYKHLIAIHAGK 326

Query: 120 PKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 179
           PKGG+ ECLKVDPDKVRRLSLSE+QLE A   Y   IVRFTQ NLLRIYPKG RV SSNY
Sbjct: 327 PKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNY 386

Query: 180 NPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 239
           NPL+GWSHGAQMVAFNMQG+GRSLWLM GMFRANGGCGY+KKP+ LL++G  +++FDPK 
Sbjct: 387 NPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKA 446

Query: 240 KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 299
            LP K TL+VTVYMGEGWY+DF HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNW
Sbjct: 447 TLPVKTTLRVTVYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNW 506

Query: 300 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKG 359
           IP+W+E FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPV EL +GIRA PLH RKG
Sbjct: 507 IPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKG 566

Query: 360 ERYKSVKLLMHFEFI 374
           E+YKSVKLL+  EF+
Sbjct: 567 EKYKSVKLLVKVEFV 581

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. At physiological calcium concentration, the preferred substrate is phosphatidylinositol 4,5-bisphosphate versus phosphatidylinositol.phosphatidylinositol.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 1EC: 1

>sp|Q9LY51|PLCD7_ARATH Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1

 Score =  523 bits (1348), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 262/381 (68%), Positives = 304/381 (79%), Gaps = 15/381 (3%)

Query: 1   MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 59
           MVT   GE+LFTP S ECLKEFPSP  LK+RI+ISTKPPKEY  A ++    +  ++G+ 
Sbjct: 212 MVTDIFGEMLFTPPSGECLKEFPSPAFLKKRIMISTKPPKEYKAATDD----DLVKKGRD 267

Query: 60  SADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDD------KSQHNEAPEYRKLI 113
             D+E WG+EVP+    + S  DK+D +G  D+D++D DD      K + N  PEY+ LI
Sbjct: 268 LGDKEVWGREVPSFIRRDRSV-DKNDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLI 326

Query: 114 AIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIR 173
           AI AGKPKGG+ ECLKVDPDKVRRLSLSE+QLE A   Y   IVRFTQRNLLR+YPKG R
Sbjct: 327 AIEAGKPKGGITECLKVDPDKVRRLSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTR 386

Query: 174 VDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNE 233
           + SSNYNPLI WSHGAQMVAFNMQG GRSLW+M GMFR NGGCGY+KKP+ LL++   N 
Sbjct: 387 ITSSNYNPLIAWSHGAQMVAFNMQGLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NA 443

Query: 234 VFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTK 293
           VFDP+  LP K TL+VT+YMGEGWYYDFPHTHFD YSPPDFY RVGIAGVPADTVMKKTK
Sbjct: 444 VFDPEATLPVKTTLRVTIYMGEGWYYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTK 503

Query: 294 TLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVP 353
           TLEDNWIP+W+E FEFPL+VPELALLRIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVP
Sbjct: 504 TLEDNWIPAWDEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVP 563

Query: 354 LHDRKGERYKSVKLLMHFEFI 374
           L ++ G + +SVKLL+  EF+
Sbjct: 564 LRNQDGVKCRSVKLLVRLEFV 584

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2

 Score =  504 bits (1298), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/373 (64%), Positives = 291/373 (78%), Gaps = 6/373 (1%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M TQ  G++L+ P S+ L EFPSP SL  RIIISTKPPKEYLE++    K+ D+     S
Sbjct: 246 MATQIFGQMLYYPESDSLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQKDNNVSPSS 305

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
            DE    +E+  L+S+        DF+   D+D+ED  +++  ++ P Y++LI IHAGKP
Sbjct: 306 EDETPRTEEIQTLESM----LFDQDFESKSDSDQED--EEASEDQKPAYKRLITIHAGKP 359

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           KG +KE +KV  DKVRRLSLSEQ+L+    +   D+VRFTQRNLLRIYPKG R +SSNY 
Sbjct: 360 KGTVKEEMKVVVDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGTRFNSSNYK 419

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           PLIGW+HGAQM+AFNMQG+G+SLWLMHGMFRANGGCGYVKKPNFL++ G H+EVFDP+ K
Sbjct: 420 PLIGWTHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHDEVFDPRKK 479

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP K+TLKV VYMG+GW  DF HTHFDAYSPPDFY ++ I GVPAD   KKTK +EDNW 
Sbjct: 480 LPVKETLKVKVYMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKTKIIEDNWY 539

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           P W+EEF FPL+VPELALLRIEV EYDMSEKDDFGGQTCLPV+EL+ GIR+VPL+D+KGE
Sbjct: 540 PIWDEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGE 599

Query: 361 RYKSVKLLMHFEF 373
           + KSV+LLM F F
Sbjct: 600 KMKSVRLLMRFIF 612

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q944C1|PLCD4_ARATH Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2

 Score =  491 bits (1263), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/381 (62%), Positives = 291/381 (76%), Gaps = 12/381 (3%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+TQT G++L+   S+  +EFPSPE LK +I+ISTKPPKEYLEA + KEK+N  ++GK S
Sbjct: 222 MITQTFGDMLYYHDSQGCQEFPSPEELKEKILISTKPPKEYLEANDTKEKDN-GEKGKDS 280

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSD-------DKSQHNEAPEYRKLI 113
            DE+ WGKE  +L S   +  D D     V++  +D +       D S   +APEY++LI
Sbjct: 281 -DEDVWGKEPEDLIS---TQSDLDKVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLI 336

Query: 114 AIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIR 173
           AIHAGKPKGGL+  LKVDP+K+RRLSLSEQ LE AV +YG D++RFTQ+N LRIYPKG R
Sbjct: 337 AIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTR 396

Query: 174 VDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNE 233
            +SSNY P IGW  GAQM+AFNMQG+GR+LWLM GMFRANGGCGYVKKP+FL+   P+ +
Sbjct: 397 FNSSNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDASPNGQ 456

Query: 234 VFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTK 293
            F PK     KKTLKV V MG+GW  DF  THFD+YSPPDF+ RVGIAG P D VM+KTK
Sbjct: 457 DFYPKDNSSPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTK 516

Query: 294 TLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVP 353
              D W P WN+EF FPL+VPELALLR+EVHE+D++EKDDFGGQTCLPVSE++QGIRAVP
Sbjct: 517 IEYDTWTPIWNKEFTFPLAVPELALLRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVP 576

Query: 354 LHDRKGERYKSVKLLMHFEFI 374
           L +RKG +Y S +LLM FEF+
Sbjct: 577 LFNRKGVKYSSTRLLMRFEFV 597

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q944C2|PLCD5_ARATH Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2

 Score =  414 bits (1065), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/374 (55%), Positives = 262/374 (70%), Gaps = 16/374 (4%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+ +   ++++ P +  LKEFPSPE LK +I+ISTKPPK  L  +++K+ E+D+  GK S
Sbjct: 221 MMKEIFMDMVYFPEAGGLKEFPSPEDLKYKIVISTKPPKGSL--RKDKDSESDAS-GKAS 277

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
           +D  A  ++     S                N+E+  D +S + +   Y +LI I +G  
Sbjct: 278 SDVSADDEKTEEETS-------------EAKNEEDGFDQESSNLDFLTYSRLITIPSGNA 324

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           K GLKE L +D   VRRLSL EQ+ + A   YG ++++FTQ+NLLRIYPK  RV+SSNY 
Sbjct: 325 KNGLKEALTIDNGGVRRLSLREQKFKKATEMYGTEVIKFTQKNLLRIYPKATRVNSSNYR 384

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           P  GW +GAQMVAFNMQG+GR+LW+MHGMFR NGGCGYVKKP+F++      EVF+PK K
Sbjct: 385 PYNGWMYGAQMVAFNMQGYGRALWMMHGMFRGNGGCGYVKKPDFMMNNNLSGEVFNPKAK 444

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP KKTLKV VYMG+GW   F  T F+ +S P+FY RVGI GV  D VMKKTK  +  W 
Sbjct: 445 LPIKKTLKVKVYMGKGWDSGFQRTCFNTWSSPNFYTRVGITGVRGDKVMKKTKKEQKTWE 504

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           P WNEEFEF L+VPELALLRIEVH+Y+M EKDDF GQTCLPVSEL+QGIR+VPL+DRKGE
Sbjct: 505 PFWNEEFEFQLTVPELALLRIEVHDYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGE 564

Query: 361 RYKSVKLLMHFEFI 374
           R  SV LLM F F+
Sbjct: 565 RLVSVTLLMRFHFL 578

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q39032|PLCD1_ARATH Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1

 Score =  408 bits (1048), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/372 (55%), Positives = 254/372 (68%), Gaps = 30/372 (8%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           MV++T G  LF    E  + FPSPESLK +I+ISTKPPKEYL+          +Q  KGS
Sbjct: 214 MVSKTFGGSLFQCTDETTECFPSPESLKNKILISTKPPKEYLQ----------TQISKGS 263

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
             +E+   +                    + + EE   ++ + + A EYR LI+IHAG  
Sbjct: 264 TTDESTRAK-------------------KISDAEEQVQEEDEESVAIEYRDLISIHAGNR 304

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           KGGLK CL  DP++V RLS+SEQ LE    T G D+V+FTQRNLLRI+PK  R DSSNY+
Sbjct: 305 KGGLKNCLNGDPNRVIRLSMSEQWLETLAKTRGPDLVKFTQRNLLRIFPKTTRFDSSNYD 364

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           PL+GW HGAQMVAFNMQ HGR LW+M GMF+ANGGCGYVKKP+ LL  GP  E+FDP  +
Sbjct: 365 PLVGWIHGAQMVAFNMQSHGRYLWMMQGMFKANGGCGYVKKPDVLLSNGPEGEIFDPCSQ 424

Query: 241 -LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 299
            LP K TLKV +Y GEGW  DFP  HFD YSPPDFYA+VGIAGVP DT   +T+  +D W
Sbjct: 425 NLPIKTTLKVKIYTGEGWNMDFPLDHFDRYSPPDFYAKVGIAGVPLDTASYRTEIDKDEW 484

Query: 300 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKG 359
            P W++EFEFPL VPEL+LL I V +YD + ++DF GQTC P+SE++ GIRAV LHDR G
Sbjct: 485 FPIWDKEFEFPLRVPELSLLCITVKDYDSNTQNDFAGQTCFPLSEVRPGIRAVRLHDRAG 544

Query: 360 ERYKSVKLLMHF 371
           E YK V+LLM F
Sbjct: 545 EVYKHVRLLMRF 556

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Required for secondary responses to abscisic acid signals.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q56W08|PLCD3_ARATH Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1

 Score =  386 bits (991), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/372 (53%), Positives = 244/372 (65%), Gaps = 32/372 (8%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+T+T   +LF   SE  K FPSPE LK +I+ISTKPPKEYLE+K        + +    
Sbjct: 215 MLTKTYRGMLFRRVSESFKHFPSPEELKGKILISTKPPKEYLESKTVHTTRTPTVK---- 270

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
             E +W +    +                    EE  D +S   EA  YR LIAIHA   
Sbjct: 271 --ETSWNRVANKIL-------------------EEYKDMES---EAVGYRDLIAIHAANC 306

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           K   K+CL  DP+K  R+S+ EQ L+  V T G D+VRFTQRNL+RIYPKG RVDSSNY+
Sbjct: 307 KDPSKDCLSDDPEKPIRVSMDEQWLDTMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYD 366

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           P +GW+HGAQMVAFNMQGHG+ LW+M GMFR NGGCGYVKKP  LL     + +FDP  +
Sbjct: 367 PHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRGNGGCGYVKKPRILLD---EHTLFDPCKR 423

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
            P K TLKV +Y GEGW  DF HTHFD YSPPDF+ ++GIAGVP DTV  +T+T  D W 
Sbjct: 424 FPIKTTLKVKIYTGEGWDLDFHHTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWF 483

Query: 301 PSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKG 359
           P W N+EF F LSVPELALL  +V +YD   ++DF GQTCLP+ ELK G+RAV LHDR G
Sbjct: 484 PIWGNDEFLFQLSVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRTG 543

Query: 360 ERYKSVKLLMHF 371
           + YK+ +LL+ F
Sbjct: 544 KAYKNTRLLVSF 555

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q9STZ3|PLCD8_ARATH Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/373 (39%), Positives = 197/373 (52%), Gaps = 54/373 (14%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+ QT   +++      L+ FPSP+ L+ +I+IS +PPKE L A +              
Sbjct: 212 MIQQTFNHMVYHHDPHSLEVFPSPQQLRNKILISRRPPKELLYAND-------------- 257

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
                                  DD   GV N  E      QH   P Y+ L++ H  +P
Sbjct: 258 -----------------------DDGKVGVRNGVE----IRQHPADPNYQSLVSFHVVEP 290

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           +G L+  L    +K++R            G Y  DI+ FTQ+  LR  P+   +  + Y 
Sbjct: 291 RGMLQNVLTGKANKIQR-----------PGWYETDIISFTQKRFLRTRPQRKLLIYAPYK 339

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           P   W HGAQ++A + +     LWLM GMFRANGGCGYVKKP+FLL  GP   VF P V 
Sbjct: 340 PQRAWMHGAQLIALSRKEEKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTVN 398

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
               K LKV +YMG+GW  DF        S PD Y R+ IAGVP D  + KT    + W 
Sbjct: 399 PVVVKILKVKIYMGDGWIVDF-KKRIGRLSKPDLYVRISIAGVPHDENIMKTTVKNNEWT 457

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           P+W EEF FPL+ P+LAL+  EV++Y++S  D F GQTCLPVSEL +GIRAVPL+D +G+
Sbjct: 458 PTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGK 517

Query: 361 RYKSVKLLMHFEF 373
              S  LL  F++
Sbjct: 518 ACSSTMLLTRFKW 530

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q6NMA7|PLCD9_ARATH Phosphoinositide phospholipase C 9 OS=Arabidopsis thaliana GN=PLC9 PE=2 SV=1

 Score =  247 bits (631), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 147/376 (39%), Positives = 198/376 (52%), Gaps = 65/376 (17%)

Query: 1   MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 59
           M+ QT G++++     + L+EFPSP  L+ +I+IS +PP + L AK              
Sbjct: 217 MIDQTFGDMVYHEDPQQSLEEFPSPAELQNKILISRRPPTKLLYAKA------------- 263

Query: 60  SADEEAWGKEVPNLKSLNNSACDKDDFDGGVDND-EEDSDDKSQHNEAPEYRKLIAIHAG 118
                                      + GV+ + +E S DK+       Y+ ++  HA 
Sbjct: 264 --------------------------VENGVELEIQEGSTDKN-------YQSVVGFHAV 290

Query: 119 KPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSN 178
           +P+G L++ L  D  +               G Y  D++ FTQ   LR  PK   + S+ 
Sbjct: 291 EPRGMLQKALTDDVQQP--------------GWYERDVISFTQNKFLRTRPKKRNLLSNP 336

Query: 179 -YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP 237
            Y P   W HGAQM+A + Q     LWLM GMFRANGGCGYVKKPNFLL  G  + VF P
Sbjct: 337 PYKPQRAWMHGAQMIALSRQDDKEKLWLMQGMFRANGGCGYVKKPNFLLNAG-SSGVFYP 395

Query: 238 KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED 297
                  KTLKV +YMG+GW  DF        S PD Y R+ IAGVP D  +  T    +
Sbjct: 396 TENPVVVKTLKVKIYMGDGWIVDF-KKRIGRLSKPDLYVRISIAGVPHDEKIMNTTVKNN 454

Query: 298 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 357
            W P+W EEF FPL+ P+LAL+  EV++Y++S  D F GQTCLPVSEL +GIRAVPL+D 
Sbjct: 455 EWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTPDYFCGQTCLPVSELIEGIRAVPLYDE 514

Query: 358 KGERYKSVKLLMHFEF 373
           +G+   S  LL  F++
Sbjct: 515 RGKACSSTMLLTRFKW 530

The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

>sp|Q8K2J0|PLCD3_MOUSE 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 OS=Mus musculus GN=Plcd3 PE=1 SV=2

 Score =  152 bits (384), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 120/237 (50%), Gaps = 9/237 (3%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           SLSE++        G   VR   + L R+YP G+R++S+NYNP   W+ G Q+VA N Q 
Sbjct: 553 SLSERKARKFTREAGTSFVRHNTQQLTRVYPLGLRMNSANYNPQEMWNSGCQLVALNFQT 612

Query: 199 HGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWY 258
            G  + L  G F  NG CGYV KP +L Q    N  FDP+   P + TL + V   +   
Sbjct: 613 PGYEMDLNTGRFLINGQCGYVLKPAYLRQL---NTTFDPECPGPPRTTLAIQVLTAQ--- 666

Query: 259 YDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTK-TLEDNWIPSWNEEFEFPLSVPEL 316
              P  + +   S  D   RV I GVP D   K+T   L + + P W +  +F L  PEL
Sbjct: 667 -QLPKLNAEKPSSIVDPLVRVEIHGVPEDCAQKETDYVLNNGFNPCWEQTLQFRLRAPEL 725

Query: 317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 373
            L+R  V +YD +  +DF GQ+ LP+S LKQG R + L  + G       L +H   
Sbjct: 726 VLVRFVVEDYDTTSPNDFVGQSTLPLSSLKQGYRHIHLLSKDGASLAPATLFVHIRI 782

Hydrolyzes the phosphatidylinositol 4,5-bisphosphate (PIP2) to generate 2 second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). DAG mediates the activation of protein kinase C (PKC), while IP3 releases Ca(2+) from intracellular stores. Essential for trophoblast and placental development. May participate in cytokinesis by hydrolyzing PIP2 at the cleavage furrow.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
255585958	594	1-phosphatidylinositol-4,5-bisphosphate	0.997	0.627	0.785	1e-175
351725699	600	phosphoinositide-specific phospholipase	1.0	0.623	0.760	1e-174
225448433	593	PREDICTED: phosphoinositide phospholipas	0.997	0.629	0.790	1e-172
225448435	592	PREDICTED: phosphoinositide phospholipas	0.997	0.630	0.790	1e-172
351720874	600	phosphatidylinositol-specific phospholip	0.994	0.62	0.759	1e-172
224112503	587	predicted protein [Populus trichocarpa]	0.997	0.635	0.772	1e-171
224098612	590	predicted protein [Populus trichocarpa]	1.0	0.633	0.781	1e-171
359486403	580	PREDICTED: phosphoinositide phospholipas	0.970	0.625	0.775	1e-169
357492695	589	Phosphoinositide phospholipase C [Medica	0.989	0.628	0.740	1e-168
116563473	588	phospholipase C [Nicotiana tabacum]	0.991	0.630	0.740	1e-166

>gi|255585958|ref|XP_002533650.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis] gi|223526463|gb|EEF28738.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase, putative [Ricinus communis]

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 296/377 (78%), Positives = 335/377 (88%), Gaps = 4/377 (1%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+TQT G+ILFTPGSECLKEFPSPESLK+RII+STKPPKEYLE +E +E+E DSQ GK  
Sbjct: 219 MITQTFGDILFTPGSECLKEFPSPESLKKRIIVSTKPPKEYLEVREIREREGDSQSGKPG 278

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEE---DSDDKSQHNEAPEYRKLIAIHA 117
           +DEE WGKE+P+LK  +    DK++ D   ++DE+   D D+KSQ N APEY+ LIAIHA
Sbjct: 279 SDEETWGKEIPDLKG-HFRVDDKNELDEDNNDDEDAAPDGDNKSQQNIAPEYKHLIAIHA 337

Query: 118 GKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 177
           GKPKGG++ECLKVDPDKVRRLSLSEQQLE A  T+G +IVRFTQRN+LR+YPKGIRVDSS
Sbjct: 338 GKPKGGIEECLKVDPDKVRRLSLSEQQLEKAAETHGKEIVRFTQRNILRVYPKGIRVDSS 397

Query: 178 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP 237
           NYNPLIGW HGAQMVAFNMQGHGRSLWLM GMFRANGGCGYVKKP+FLL++GPH EVFDP
Sbjct: 398 NYNPLIGWMHGAQMVAFNMQGHGRSLWLMQGMFRANGGCGYVKKPDFLLKSGPHGEVFDP 457

Query: 238 KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED 297
           + KLP K TLKV VYMGEGWYYDF  THFDAYSPPDFYARVGIAGVPADT+MKKTKTLED
Sbjct: 458 RAKLPVKTTLKVKVYMGEGWYYDFDRTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLED 517

Query: 298 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 357
           NWIP WNEEFEFPL+VPELALLR+EVHEYDMSEKDDFGGQ+CLPVSEL++GIRA+PLHDR
Sbjct: 518 NWIPVWNEEFEFPLTVPELALLRVEVHEYDMSEKDDFGGQSCLPVSELRKGIRAIPLHDR 577

Query: 358 KGERYKSVKLLMHFEFI 374
           KG +Y SVKLL+ F+F+
Sbjct: 578 KGVKYNSVKLLVRFDFV 594

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725699|ref|NP_001235310.1| phosphoinositide-specific phospholipase C P13 [Glycine max] gi|1399305|gb|AAB03258.1| phosphoinositide-specific phospholipase C P13 [Glycine max]

 Score =  615 bits (1587), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 292/384 (76%), Positives = 327/384 (85%), Gaps = 10/384 (2%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE---------EKEKE 51
           MVTQT G+ILFTP SE +KEFPSPESLK+RIIISTKPPKEYLEAKE         EKEK 
Sbjct: 215 MVTQTFGDILFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKG 274

Query: 52  NDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEE-DSDDKSQHNEAPEYR 110
           +DS+ GK S ++EAWGKEVP+LK         ++ D  ++++EE D  DKS HNEAPEYR
Sbjct: 275 DDSEHGKASGEDEAWGKEVPSLKGGTIEDYKDNNVDEDLNDEEEFDESDKSHHNEAPEYR 334

Query: 111 KLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPK 170
            LIAIHAGKPKGGL ECLKVDP+KVRRLSLSEQQLE A   YG  IVRFTQRN+LR+YPK
Sbjct: 335 HLIAIHAGKPKGGLVECLKVDPEKVRRLSLSEQQLEKAAINYGQQIVRFTQRNILRVYPK 394

Query: 171 GIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGP 230
           G R+DSSNYNPLIGW HGAQMVAFNMQG+GRSLWLMHGMFRANGGCGYVKKPNFLL+TGP
Sbjct: 395 GTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGP 454

Query: 231 HNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK 290
            +EVF+PK KLP K TLKVTVYMGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+MK
Sbjct: 455 DDEVFNPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMK 514

Query: 291 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 350
           +TK +EDNW+P+WNE FEFPL+VPELALLRIEVHEYDMSEKDDFGGQTCLP+ EL+ GIR
Sbjct: 515 RTKAIEDNWLPTWNEAFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIR 574

Query: 351 AVPLHDRKGERYKSVKLLMHFEFI 374
           A+PLH +KG++Y +VKLLM FEFI
Sbjct: 575 AIPLHSQKGDKYNTVKLLMRFEFI 598

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448433|ref|XP_002269949.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 1 [Vitis vinifera] gi|147828132|emb|CAN64084.1| hypothetical protein VITISV_006935 [Vitis vinifera]

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/377 (79%), Positives = 331/377 (87%), Gaps = 4/377 (1%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           MVTQT G+ILFTPG ECL EFPSPESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK S
Sbjct: 218 MVTQTFGDILFTPGPECLNEFPSPESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKES 277

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDS---DDKSQHNEAPEYRKLIAIHA 117
           ADEEAWGKEV NLK  +  A D+ + +   + DEED    D KSQ N APEY++LIAIHA
Sbjct: 278 ADEEAWGKEVSNLKP-STVAVDESNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHA 336

Query: 118 GKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 177
           GK KGGL E L+VDPDKVRRLSLSEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSS
Sbjct: 337 GKVKGGLTEWLRVDPDKVRRLSLSEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSS 396

Query: 178 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP 237
           NYNP+IGW HGAQMVAFNMQG+GRSLW+MHGMF+ANGGCGYVKKP+FLL  G H+ VFDP
Sbjct: 397 NYNPVIGWMHGAQMVAFNMQGYGRSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDP 456

Query: 238 KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED 297
           K KLP K TLKVTVYMGEGWY+DF HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLED
Sbjct: 457 KAKLPVKTTLKVTVYMGEGWYFDFRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLED 516

Query: 298 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 357
           NW P+W+E FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL  R
Sbjct: 517 NWTPNWDEHFEFPLTVPELALLRVEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSR 576

Query: 358 KGERYKSVKLLMHFEFI 374
           KG++Y SVKLLM FEF+
Sbjct: 577 KGDKYPSVKLLMRFEFV 593

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448435|ref|XP_002270230.1| PREDICTED: phosphoinositide phospholipase C 2 isoform 2 [Vitis vinifera]

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 298/377 (79%), Positives = 331/377 (87%), Gaps = 4/377 (1%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           MVTQT G+ILFTPG ECL EFPSPESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK S
Sbjct: 217 MVTQTFGDILFTPGPECLNEFPSPESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKES 276

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDS---DDKSQHNEAPEYRKLIAIHA 117
           ADEEAWGKEV NLK  +  A D+ + +   + DEED    D KSQ N APEY++LIAIHA
Sbjct: 277 ADEEAWGKEVSNLKP-STVAVDESNLEEEENIDEEDLDEGDPKSQQNAAPEYKRLIAIHA 335

Query: 118 GKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 177
           GK KGGL E L+VDPDKVRRLSLSEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSS
Sbjct: 336 GKVKGGLTEWLRVDPDKVRRLSLSEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSS 395

Query: 178 NYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP 237
           NYNP+IGW HGAQMVAFNMQG+GRSLW+MHGMF+ANGGCGYVKKP+FLL  G H+ VFDP
Sbjct: 396 NYNPVIGWMHGAQMVAFNMQGYGRSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDP 455

Query: 238 KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED 297
           K KLP K TLKVTVYMGEGWY+DF HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLED
Sbjct: 456 KAKLPVKTTLKVTVYMGEGWYFDFRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLED 515

Query: 298 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 357
           NW P+W+E FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL  R
Sbjct: 516 NWTPNWDEHFEFPLTVPELALLRVEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSR 575

Query: 358 KGERYKSVKLLMHFEFI 374
           KG++Y SVKLLM FEF+
Sbjct: 576 KGDKYPSVKLLMRFEFV 592

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720874|ref|NP_001236167.1| phosphatidylinositol-specific phospholipase C [Glycine max] gi|945039|gb|AAA74441.1| phosphatidylinositol-specific phospholipase C [Glycine max]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 293/386 (75%), Positives = 327/386 (84%), Gaps = 14/386 (3%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE---------EKEKE 51
           MVT+T G++LFTP SE +KEFPSPESLK+RIIISTKPPKEYLEAKE         EKEK 
Sbjct: 215 MVTETFGDLLFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKG 274

Query: 52  NDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVD-NDEE--DSDDKSQHNEAPE 108
           +DSQ GK   ++EAWGKEVP+LK    +  D  D++   D NDEE  D  DKS HNEAPE
Sbjct: 275 DDSQHGKALGEDEAWGKEVPSLKG--GTIEDYKDYNVDEDLNDEEEFDESDKSHHNEAPE 332

Query: 109 YRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIY 168
           YR+LIAIHAGKPKGGL ECLKVDPDKVRRLSLSEQQLE A   +G  IVRFTQRN+LR+Y
Sbjct: 333 YRRLIAIHAGKPKGGLAECLKVDPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVY 392

Query: 169 PKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQT 228
           PKG R+DSSNYNPLIGW HGAQMVAFNMQG+GRSLWLMHGMFRANGGCGYVKKPNFLL+T
Sbjct: 393 PKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLET 452

Query: 229 GPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV 288
           GP +EVF+PK KLP K TLKVTVYMGEGWYYDF HTHFD YSPPDFY RVGIAGVP DT+
Sbjct: 453 GPDDEVFNPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTI 512

Query: 289 MKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 348
           MK+TK +EDNW+P+WNE FEFPL+VPELALLRIEVHEYDMSEKDDFGGQ CLP+ EL+ G
Sbjct: 513 MKRTKAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQACLPIWELRSG 572

Query: 349 IRAVPLHDRKGERYKSVKLLMHFEFI 374
           IRA+PLH +KG++Y +VKLLM FEFI
Sbjct: 573 IRAIPLHSQKGDKYNTVKLLMRFEFI 598

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112503|ref|XP_002316212.1| predicted protein [Populus trichocarpa] gi|222865252|gb|EEF02383.1| predicted protein [Populus trichocarpa]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/374 (77%), Positives = 328/374 (87%), Gaps = 1/374 (0%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           MVTQT G+ LF+PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKE K+KE+DSQ+G  +
Sbjct: 215 MVTQTFGDTLFSPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEIKDKESDSQKGNAA 274

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
            DEEAWGKE+ NLK  ++     +D +   ++  E  D K  H+ APEY++LIAI AGKP
Sbjct: 275 PDEEAWGKEILNLKGADDKNELDEDDNDAEEDPGE-GDHKLPHDIAPEYKRLIAIPAGKP 333

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           KGGL+ECLKVDPDK RRLSLSEQQLENA  T+G +IVRFTQRN+LR+YPKGIRV+SSNYN
Sbjct: 334 KGGLEECLKVDPDKARRLSLSEQQLENAAETHGKEIVRFTQRNILRVYPKGIRVNSSNYN 393

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           PLIGW HGAQMVAFNMQG+GRSLW+M GMFRANGGCG+VKKP+FLL++GPH EVFDPK K
Sbjct: 394 PLIGWMHGAQMVAFNMQGYGRSLWMMQGMFRANGGCGFVKKPDFLLKSGPHGEVFDPKAK 453

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP +KTLKV +YMGEGWYYDF HTHFDAYSPPDFY RVGIAGVPADT MKKT+TLEDNWI
Sbjct: 454 LPVQKTLKVKIYMGEGWYYDFHHTHFDAYSPPDFYVRVGIAGVPADTGMKKTRTLEDNWI 513

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           P W+E FEFPL+VP+LALLRIEVHEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRKGE
Sbjct: 514 PVWDEGFEFPLTVPDLALLRIEVHEYDMSEKDDFGGQTCLPVRELREGIRAVPLHDRKGE 573

Query: 361 RYKSVKLLMHFEFI 374
           +Y SVKLL+  EF+
Sbjct: 574 KYNSVKLLVRLEFV 587

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098612|ref|XP_002311223.1| predicted protein [Populus trichocarpa] gi|222851043|gb|EEE88590.1| predicted protein [Populus trichocarpa]

 Score =  605 bits (1561), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 294/376 (78%), Positives = 329/376 (87%), Gaps = 2/376 (0%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           MVTQT G+ILFTPGSE LKEFPSP+SLKRRIIISTKPPKEYLEAKE K+KE+  Q+G  +
Sbjct: 215 MVTQTFGDILFTPGSERLKEFPSPDSLKRRIIISTKPPKEYLEAKEIKDKESHYQKGNAA 274

Query: 61  ADEEAWGKEVPNLKS--LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAG 118
           +DEEAWGKE+P L    L +   + D  D   + D ++ D K QH+ APEY++LIAIHAG
Sbjct: 275 SDEEAWGKEIPILNGHILADDKNESDKDDDDAEEDLDEGDHKLQHDIAPEYKRLIAIHAG 334

Query: 119 KPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSN 178
           KPKGGL ECLKVDPDKVRRLSLSEQQLE A  T+G +IVRFTQRN+LR+YPKG RV+SSN
Sbjct: 335 KPKGGLDECLKVDPDKVRRLSLSEQQLEKAAETHGKEIVRFTQRNILRVYPKGTRVNSSN 394

Query: 179 YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPK 238
           YNPLIGW HGAQMVAFNMQG+GRSLWLM GMFRANGGCG+VKKP+FLL++GPH EVFD K
Sbjct: 395 YNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGFVKKPSFLLKSGPHGEVFDTK 454

Query: 239 VKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN 298
            KLP +KTLKV +YMGEGW+YDF HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED+
Sbjct: 455 AKLPMQKTLKVKIYMGEGWFYDFQHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDS 514

Query: 299 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRK 358
           WIP WNEEFEFPL+VPELALLRIEVHEYDMSEKDDFGGQTCLPV EL++GIRAVPLHDRK
Sbjct: 515 WIPFWNEEFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELREGIRAVPLHDRK 574

Query: 359 GERYKSVKLLMHFEFI 374
           GERYK VKLL+  EF+
Sbjct: 575 GERYKCVKLLVRLEFV 590

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486403|ref|XP_003633437.1| PREDICTED: phosphoinositide phospholipase C 2 [Vitis vinifera]

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 290/374 (77%), Positives = 321/374 (85%), Gaps = 11/374 (2%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           MVTQT G+ILFTPG ECL EFPSPESLK+RIIISTKPPKEYLEAK+ KEKENDSQ+GK S
Sbjct: 218 MVTQTFGDILFTPGPECLNEFPSPESLKKRIIISTKPPKEYLEAKDVKEKENDSQKGKES 277

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
           ADEEAWGKE    +  N               D ++ D KSQ N APEY++LIAIHAGK 
Sbjct: 278 ADEEAWGKESNLEEEENIDE-----------EDLDEGDPKSQQNAAPEYKRLIAIHAGKV 326

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           KGGL E L+VDPDKVRRLSLSEQ+LE AV T+G +IVRFTQRNLLR+YPKGIR DSSNYN
Sbjct: 327 KGGLTEWLRVDPDKVRRLSLSEQELEKAVLTHGKEIVRFTQRNLLRVYPKGIRFDSSNYN 386

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           P+IGW HGAQMVAFNMQG+GRSLW+MHGMF+ANGGCGYVKKP+FLL  G H+ VFDPK K
Sbjct: 387 PVIGWMHGAQMVAFNMQGYGRSLWIMHGMFKANGGCGYVKKPDFLLNNGSHDGVFDPKAK 446

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP K TLKVTVYMGEGWY+DF HTHFDAYSPPDFYARVGIAGVPADT+MKKTKTLEDNW 
Sbjct: 447 LPVKTTLKVTVYMGEGWYFDFRHTHFDAYSPPDFYARVGIAGVPADTIMKKTKTLEDNWT 506

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           P+W+E FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPVSEL++GIRAVPL  RKG+
Sbjct: 507 PNWDEHFEFPLTVPELALLRVEVHEYDMSEKDDFGGQTCLPVSELRRGIRAVPLFSRKGD 566

Query: 361 RYKSVKLLMHFEFI 374
           +Y SVKLLM FEF+
Sbjct: 567 KYPSVKLLMRFEFV 580

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492695|ref|XP_003616636.1| Phosphoinositide phospholipase C [Medicago truncatula] gi|355517971|gb|AES99594.1| Phosphoinositide phospholipase C [Medicago truncatula]

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 280/378 (74%), Positives = 318/378 (84%), Gaps = 8/378 (2%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           MVT T G+ILF PGSE LKEFPSPESLK+RIIISTKPPKEYLE KE KEKE+DS  GK S
Sbjct: 214 MVTSTFGDILFVPGSESLKEFPSPESLKKRIIISTKPPKEYLETKEVKEKEDDSLHGKAS 273

Query: 61  ADEEAWGKEVPNLK-----SLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAI 115
            D+EAWG E+P+ K         ++ DK+ F    D +E    DKS HN APEY+ LIAI
Sbjct: 274 GDDEAWGTEIPSFKLGLLSDYKGNSLDKEYFH---DEEELSESDKSHHNVAPEYKGLIAI 330

Query: 116 HAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVD 175
           HAGK KGG+   LK+DP+K RR+SLSEQQLE A  T+G ++VRFTQ+N+LR++PKG R+D
Sbjct: 331 HAGKSKGGIDAWLKIDPEKARRISLSEQQLEKAAITHGKEVVRFTQKNILRVFPKGTRID 390

Query: 176 SSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVF 235
           SSNYNPLIGW HGAQMVAFNMQG+GRSLWLMHGMFRANGGCGYVKKP+FLL TGP NEVF
Sbjct: 391 SSNYNPLIGWIHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLTTGPDNEVF 450

Query: 236 DPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTL 295
           DPK KLP K TLKVTVYMGEGWYYDF HTHFD YSPPDFYARVGIAGVP+D++MKKT+ +
Sbjct: 451 DPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYARVGIAGVPSDSIMKKTRAI 510

Query: 296 EDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 355
           EDNW+P+WNE FEFPL+VPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL+ G+RAV LH
Sbjct: 511 EDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELRSGVRAVSLH 570

Query: 356 DRKGERYKSVKLLMHFEF 373
            +KG++Y SVKLLM FEF
Sbjct: 571 SQKGDKYNSVKLLMRFEF 588

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116563473|gb|ABJ99758.1| phospholipase C [Nicotiana tabacum]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 277/374 (74%), Positives = 323/374 (86%), Gaps = 3/374 (0%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+TQT G++LF+P S CLK FPSPESLKRR++ISTKPPKEYL+AKE KEK  DS++G  S
Sbjct: 218 MITQTFGDMLFSPDS-CLKNFPSPESLKRRVLISTKPPKEYLQAKEVKEK--DSKKGTES 274

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
            D EAWG+EV +LK+  N   D DD  G  D++ ++ D  SQ N APEY+ LIAIHAGK 
Sbjct: 275 PDTEAWGREVSDLKARYNDKDDSDDGAGVEDDESDEGDPNSQQNVAPEYKCLIAIHAGKG 334

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           KGGL + L+VDPDKVRRLSLSEQ+L  AV T+G +I+RFTQRNLLRIYPKGIR DSSNYN
Sbjct: 335 KGGLSDWLRVDPDKVRRLSLSEQELGKAVVTHGKEIIRFTQRNLLRIYPKGIRFDSSNYN 394

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           P + W+HGAQMVAFNMQG+GRSLWLMHGMFR+NGGCGYVKKP+ LL+ GP+N++FDP+  
Sbjct: 395 PFVAWTHGAQMVAFNMQGYGRSLWLMHGMFRSNGGCGYVKKPDILLKAGPNNQIFDPEAN 454

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP K TLKVTV+MGEGWYYDF HTHFDAYSPPDFYA++GIAGVPAD VMKKT+TLEDNWI
Sbjct: 455 LPVKTTLKVTVFMGEGWYYDFNHTHFDAYSPPDFYAKIGIAGVPADNVMKKTRTLEDNWI 514

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           P+W+E+FEFPL+VPELALLR+EVHEYDMSEKDDF GQTCLPVSEL+QGIRAV LHDRKGE
Sbjct: 515 PTWDEKFEFPLTVPELALLRVEVHEYDMSEKDDFAGQTCLPVSELRQGIRAVSLHDRKGE 574

Query: 361 RYKSVKLLMHFEFI 374
           +Y SVKLLM FE++
Sbjct: 575 KYNSVKLLMRFEYV 588

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
TAIR|locus:2103437	581	PLC2 "phospholipase C 2" [Arab	0.986	0.635	0.690	3.1e-138
TAIR|locus:2082018	584	AT3G55940 [Arabidopsis thalian	0.981	0.628	0.655	1e-130
TAIR|locus:504956034	613	AT2G40116 [Arabidopsis thalian	0.981	0.598	0.605	2.5e-120
TAIR|locus:2178848	597	PLC4 "phosphatidylinositol-spe	0.994	0.623	0.589	8.8e-118
TAIR|locus:2178803	561	PLC1 "phospholipase C1" [Arabi	0.729	0.486	0.638	3.2e-102
TAIR|locus:2178833	578	PLC5 "phosphatidylinositol-spe	0.957	0.619	0.532	3.5e-98
TAIR|locus:2121239	564	PLC1 "phospholipase C1" [Arabi	0.719	0.476	0.615	7.7e-97
TAIR|locus:2099530	531	PLC8 "phosphatidylinositol-spe	0.692	0.487	0.455	8.7e-65
TAIR|locus:2075696	531	PLC9 "AT3G47220" [Arabidopsis	0.665	0.468	0.469	1.8e-62
UNIPROTKB|E1BJE0	815	PLCD3 "Uncharacterized protein	0.625	0.287	0.386	4.4e-39

TAIR|locus:2103437 PLC2 "phospholipase C 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1353 (481.3 bits), Expect = 3.1e-138, P = 3.1e-138
 Identities = 259/375 (69%), Positives = 288/375 (76%)

Query:     1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKG 59
             MVT+  GEILFTP   E LKEFPSP SLKRRIIIST                   Q+GK 
Sbjct:   212 MVTEIFGEILFTPPVGESLKEFPSPNSLKRRIIISTKPPKEYKEGKDVEVV----QKGKD 267

Query:    60 SADEEAWGKEVPNLKSLNNSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGK 119
               DEE WG+EVP+    N S                  +DKS+ N  P+Y+ LIAIHAGK
Sbjct:   268 LGDEEVWGREVPSFIQRNKSEAKDDLDGNDDDDDDD-DEDKSKINAPPQYKHLIAIHAGK 326

Query:   120 PKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 179
             PKGG+ ECLKVDPDKVRRLSLSE+QLE A   Y   IVRFTQ NLLRIYPKG RV SSNY
Sbjct:   327 PKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNY 386

Query:   180 NPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 239
             NPL+GWSHGAQMVAFNMQG+GRSLWLM GMFRANGGCGY+KKP+ LL++G  +++FDPK 
Sbjct:   387 NPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKA 446

Query:   240 KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 299
              LP K TL+VTVYMGEGWY+DF HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNW
Sbjct:   447 TLPVKTTLRVTVYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNW 506

Query:   300 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKG 359
             IP+W+E FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPV EL +GIRA PLH RKG
Sbjct:   507 IPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELSEGIRAFPLHSRKG 566

Query:   360 ERYKSVKLLMHFEFI 374
             E+YKSVKLL+  EF+
Sbjct:   567 EKYKSVKLLVKVEFV 581

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0004629 "phospholipase C activity" evidence=IEA;TAS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

TAIR|locus:2082018 AT3G55940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1282 (456.3 bits), Expect = 1.0e-130, P = 1.0e-130
 Identities = 249/380 (65%), Positives = 286/380 (75%)

Query:     1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKG 59
             MVT   GE+LFTP S ECLKEFPSP  LK+RI+IST                   ++G+ 
Sbjct:   212 MVTDIFGEMLFTPPSGECLKEFPSPAFLKKRIMISTKPPKEYKAATDDDLV----KKGRD 267

Query:    60 SADEEAWGKEVPNL----KSLN-NSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIA 114
               D+E WG+EVP+     +S++ N +                 DDK + N  PEY+ LIA
Sbjct:   268 LGDKEVWGREVPSFIRRDRSVDKNDSNGDDDDDDDDDDDDDDGDDKIKKNAPPEYKHLIA 327

Query:   115 IHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRV 174
             I AGKPKGG+ ECLKVDPDKVRRLSLSE+QLE A   Y   IVRFTQRNLLR+YPKG R+
Sbjct:   328 IEAGKPKGGITECLKVDPDKVRRLSLSEEQLEKASEKYAKQIVRFTQRNLLRVYPKGTRI 387

Query:   175 DSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEV 234
              SSNYNPLI WSHGAQMVAFNMQG GRSLW+M GMFR NGGCGY+KKP+ LL++   N V
Sbjct:   388 TSSNYNPLIAWSHGAQMVAFNMQGLGRSLWVMQGMFRGNGGCGYIKKPDLLLKS---NAV 444

Query:   235 FDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKT 294
             FDP+  LP K TL+VT+YMGEGWYYDFPHTHFD YSPPDFY RVGIAGVPADTVMKKTKT
Sbjct:   445 FDPEATLPVKTTLRVTIYMGEGWYYDFPHTHFDRYSPPDFYTRVGIAGVPADTVMKKTKT 504

Query:   295 LEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPL 354
             LEDNWIP+W+E FEFPL+VPELALLRIEVHEYDMSEKDDFGGQ CLPV EL+QGIRAVPL
Sbjct:   505 LEDNWIPAWDEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQICLPVWELRQGIRAVPL 564

Query:   355 HDRKGERYKSVKLLMHFEFI 374
              ++ G + +SVKLL+  EF+
Sbjct:   565 RNQDGVKCRSVKLLVRLEFV 584

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0004629 "phospholipase C activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

TAIR|locus:504956034 AT2G40116 [Arabidopsis thaliana (taxid:3702)]

 Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
 Identities = 226/373 (60%), Positives = 271/373 (72%)

Query:     1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGS 60
             M TQ  G++L+ P S+ L EFPSP SL  RIIIST                 D+     S
Sbjct:   246 MATQIFGQMLYYPESDSLLEFPSPASLLHRIIISTKPPKEYLESRNPIVKQKDNNVSPSS 305

Query:    61 ADEEAWGKEVPNLKSLNNSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKP 120
              DE    +E+  L+S+                     D+++  ++ P Y++LI IHAGKP
Sbjct:   306 EDETPRTEEIQTLESM------LFDQDFESKSDSDQEDEEASEDQKPAYKRLITIHAGKP 359

Query:   121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
             KG +KE +KV  DKVRRLSLSEQ+L+    +   D+VRFTQRNLLRIYPKG R +SSNY 
Sbjct:   360 KGTVKEEMKVVVDKVRRLSLSEQELDRTCSSNSQDVVRFTQRNLLRIYPKGTRFNSSNYK 419

Query:   181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
             PLIGW+HGAQM+AFNMQG+G+SLWLMHGMFRANGGCGYVKKPNFL++ G H+EVFDP+ K
Sbjct:   420 PLIGWTHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYVKKPNFLMKKGFHDEVFDPRKK 479

Query:   241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
             LP K+TLKV VYMG+GW  DF HTHFDAYSPPDFY ++ I GVPAD   KKTK +EDNW 
Sbjct:   480 LPVKETLKVKVYMGDGWRMDFSHTHFDAYSPPDFYTKMFIVGVPADNAKKKTKIIEDNWY 539

Query:   301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
             P W+EEF FPL+VPELALLRIEV EYDMSEKDDFGGQTCLPV+EL+ GIR+VPL+D+KGE
Sbjct:   540 PIWDEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQTCLPVAELRPGIRSVPLYDKKGE 599

Query:   361 RYKSVKLLMHFEF 373
             + KSV+LLM F F
Sbjct:   600 KMKSVRLLMRFIF 612

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA;ISS

GO:0004629 "phospholipase C activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA;ISS

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA;ISS

TAIR|locus:2178848 PLC4 "phosphatidylinositol-speciwc phospholipase C4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 223/378 (58%), Positives = 270/378 (71%)

Query:     1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGS 60
             M+TQT G++L+   S+  +EFPSPE LK +I+IST                N  ++GK S
Sbjct:   222 MITQTFGDMLYYHDSQGCQEFPSPEELKEKILISTKPPKEYLEANDTKEKDN-GEKGKDS 280

Query:    61 ADEEAWGKEVPNLKS----LNNSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIH 116
              DE+ WGKE  +L S    L+                     D S   +APEY++LIAIH
Sbjct:   281 -DEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIH 339

Query:   117 AGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDS 176
             AGKPKGGL+  LKVDP+K+RRLSLSEQ LE AV +YG D++RFTQ+N LRIYPKG R +S
Sbjct:   340 AGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNS 399

Query:   177 SNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFD 236
             SNY P IGW  GAQM+AFNMQG+GR+LWLM GMFRANGGCGYVKKP+FL+   P+ + F 
Sbjct:   400 SNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDASPNGQDFY 459

Query:   237 PKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE 296
             PK     KKTLKV V MG+GW  DF  THFD+YSPPDF+ RVGIAG P D VM+KTK   
Sbjct:   460 PKDNSSPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEY 519

Query:   297 DNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHD 356
             D W P WN+EF FPL+VPELALLR+EVHE+D++EKDDFGGQTCLPVSE++QGIRAVPL +
Sbjct:   520 DTWTPIWNKEFTFPLAVPELALLRVEVHEHDVNEKDDFGGQTCLPVSEIRQGIRAVPLFN 579

Query:   357 RKGERYKSVKLLMHFEFI 374
             RKG +Y S +LLM FEF+
Sbjct:   580 RKGVKYSSTRLLMRFEFV 597

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA;ISS

GO:0004629 "phospholipase C activity" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA;ISS

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0042732 "D-xylose metabolic process" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

TAIR|locus:2178803 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)]

 Score = 945 (337.7 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
 Identities = 175/274 (63%), Positives = 208/274 (75%)

Query:    99 DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR 158
             ++ + + A EYR LI+IHAG  KGGLK CL  DP++V RLS+SEQ LE    T G D+V+
Sbjct:   283 EEDEESVAIEYRDLISIHAGNRKGGLKNCLNGDPNRVIRLSMSEQWLETLAKTRGPDLVK 342

Query:   159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGY 218
             FTQRNLLRI+PK  R DSSNY+PL+GW HGAQMVAFNMQ HGR LW+M GMF+ANGGCGY
Sbjct:   343 FTQRNLLRIFPKTTRFDSSNYDPLVGWIHGAQMVAFNMQSHGRYLWMMQGMFKANGGCGY 402

Query:   219 VKKPNFLLQTGPHNEVFDP-KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYAR 277
             VKKP+ LL  GP  E+FDP    LP K TLKV +Y GEGW  DFP  HFD YSPPDFYA+
Sbjct:   403 VKKPDVLLSNGPEGEIFDPCSQNLPIKTTLKVKIYTGEGWNMDFPLDHFDRYSPPDFYAK 462

Query:   278 VGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 337
             VGIAGVP DT   +T+  +D W P W++EFEFPL VPEL+LL I V +YD + ++DF GQ
Sbjct:   463 VGIAGVPLDTASYRTEIDKDEWFPIWDKEFEFPLRVPELSLLCITVKDYDSNTQNDFAGQ 522

Query:   338 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 371
             TC P+SE++ GIRAV LHDR GE YK V+LLM F
Sbjct:   523 TCFPLSEVRPGIRAVRLHDRAGEVYKHVRLLMRF 556

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0004629 "phospholipase C activity" evidence=IEA;ISS;IDA;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009269 "response to desiccation" evidence=RCA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

TAIR|locus:2178833 PLC5 "phosphatidylinositol-speciwc phospholipase C5" [Arabidopsis thaliana (taxid:3702)]

 Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
 Identities = 199/374 (53%), Positives = 247/374 (66%)

Query:     1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTXXXXXXXXXXXXXXXXNDSQRGKGS 60
             M+ +   ++++ P +  LKEFPSPE LK +I+IST                +D+  GK S
Sbjct:   221 MMKEIFMDMVYFPEAGGLKEFPSPEDLKYKIVISTKPPKGSLRKDKDSE--SDAS-GKAS 277

Query:    61 ADEEAWGKEVPNLKSLNNSACXXXXXXXXXXXXXXXSDDKSQHNEAPEYRKLIAIHAGKP 120
             +D  A  ++     S                      D +S + +   Y +LI I +G  
Sbjct:   278 SDVSADDEKTEEETS-------------EAKNEEDGFDQESSNLDFLTYSRLITIPSGNA 324

Query:   121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
             K GLKE L +D   VRRLSL EQ+ + A   YG ++++FTQ+NLLRIYPK  RV+SSNY 
Sbjct:   325 KNGLKEALTIDNGGVRRLSLREQKFKKATEMYGTEVIKFTQKNLLRIYPKATRVNSSNYR 384

Query:   181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
             P  GW +GAQMVAFNMQG+GR+LW+MHGMFR NGGCGYVKKP+F++      EVF+PK K
Sbjct:   385 PYNGWMYGAQMVAFNMQGYGRALWMMHGMFRGNGGCGYVKKPDFMMNNNLSGEVFNPKAK 444

Query:   241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
             LP KKTLKV VYMG+GW   F  T F+ +S P+FY RVGI GV  D VMKKTK  +  W 
Sbjct:   445 LPIKKTLKVKVYMGKGWDSGFQRTCFNTWSSPNFYTRVGITGVRGDKVMKKTKKEQKTWE 504

Query:   301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
             P WNEEFEF L+VPELALLRIEVH+Y+M EKDDF GQTCLPVSEL+QGIR+VPL+DRKGE
Sbjct:   505 PFWNEEFEFQLTVPELALLRIEVHDYNMPEKDDFSGQTCLPVSELRQGIRSVPLYDRKGE 564

Query:   361 RYKSVKLLMHFEFI 374
             R  SV LLM F F+
Sbjct:   565 RLVSVTLLMRFHFL 578

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0004629 "phospholipase C activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

TAIR|locus:2121239 PLC1 "phospholipase C1" [Arabidopsis thaliana (taxid:3702)]

 Score = 895 (320.1 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
 Identities = 168/273 (61%), Positives = 200/273 (73%)

Query:   100 KSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF 159
             K   +EA  YR LIAIHA   K   K+CL  DP+K  R+S+ EQ L+  V T G D+VRF
Sbjct:   286 KDMESEAVGYRDLIAIHAANCKDPSKDCLSDDPEKPIRVSMDEQWLDTMVRTRGTDLVRF 345

Query:   160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYV 219
             TQRNL+RIYPKG RVDSSNY+P +GW+HGAQMVAFNMQGHG+ LW+M GMFR NGGCGYV
Sbjct:   346 TQRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRGNGGCGYV 405

Query:   220 KKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVG 279
             KKP  LL    H  +FDP  + P K TLKV +Y GEGW  DF HTHFD YSPPDF+ ++G
Sbjct:   406 KKPRILLDE--HT-LFDPCKRFPIKTTLKVKIYTGEGWDLDFHHTHFDQYSPPDFFVKIG 462

Query:   280 IAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 338
             IAGVP DTV  +T+T  D W P W N+EF F LSVPELALL  +V +YD   ++DF GQT
Sbjct:   463 IAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLSVPELALLWFKVQDYDNDTQNDFAGQT 522

Query:   339 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHF 371
             CLP+ ELK G+RAV LHDR G+ YK+ +LL+ F
Sbjct:   523 CLPLPELKSGVRAVRLHDRTGKAYKNTRLLVSF 555

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0004629 "phospholipase C activity" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=RCA

GO:0051645 "Golgi localization" evidence=RCA

GO:0051646 "mitochondrion localization" evidence=RCA

GO:0060151 "peroxisome localization" evidence=RCA

TAIR|locus:2099530 PLC8 "phosphatidylinositol-speciwc phospholipase C8" [Arabidopsis thaliana (taxid:3702)]

 Score = 612 (220.5 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
 Identities = 124/272 (45%), Positives = 162/272 (59%)

Query:   102 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQ 161
             QH   P Y+ L++ H  +P+G L+  L    +K++R            G Y  DI+ FTQ
Sbjct:   272 QHPADPNYQSLVSFHVVEPRGMLQNVLTGKANKIQR-----------PGWYETDIISFTQ 320

Query:   162 RNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKK 221
             +  LR  P+   +  + Y P   W HGAQ++A + +     LWLM GMFRANGGCGYVKK
Sbjct:   321 KRFLRTRPQRKLLIYAPYKPQRAWMHGAQLIALSRKEEKEKLWLMQGMFRANGGCGYVKK 380

Query:   222 PNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 281
             P+FLL  GP   VF P V     K LKV +YMG+GW  DF        S PD Y R+ IA
Sbjct:   381 PDFLLNAGPSG-VFYPTVNPVVVKILKVKIYMGDGWIVDFKK-RIGRLSKPDLYVRISIA 438

Query:   282 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLP 341
             GVP D  + KT    + W P+W EEF FPL+ P+LAL+  EV++Y++S  D F GQTCLP
Sbjct:   439 GVPHDENIMKTTVKNNEWTPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLP 498

Query:   342 VSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 373
             VSEL +GIRAVPL+D +G+   S  LL  F++
Sbjct:   499 VSELIEGIRAVPLYDERGKACSSTMLLTRFKW 530

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0004629 "phospholipase C activity" evidence=IEA;ISS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA;ISS

TAIR|locus:2075696 PLC9 "AT3G47220" [Arabidopsis thaliana (taxid:3702)]

 Score = 584 (210.6 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
 Identities = 125/266 (46%), Positives = 157/266 (59%)

Query:   109 YRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIY 168
             Y+ ++  HA +P+G L++ L    D V       QQ     G Y  D++ FTQ   LR  
Sbjct:   281 YQSVVGFHAVEPRGMLQKALT---DDV-------QQ----PGWYERDVISFTQNKFLRTR 326

Query:   169 PKGIRVDSSN-YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQ 227
             PK   + S+  Y P   W HGAQM+A + Q     LWLM GMFRANGGCGYVKKPNFLL 
Sbjct:   327 PKKRNLLSNPPYKPQRAWMHGAQMIALSRQDDKEKLWLMQGMFRANGGCGYVKKPNFLLN 386

Query:   228 TGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT 287
              G    VF P       KTLKV +YMG+GW  DF        S PD Y R+ IAGVP D 
Sbjct:   387 AGSSG-VFYPTENPVVVKTLKVKIYMGDGWIVDFKK-RIGRLSKPDLYVRISIAGVPHDE 444

Query:   288 VMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 347
              +  T    + W P+W EEF FPL+ P+LAL+  EV++Y++S  D F GQTCLPVSEL +
Sbjct:   445 KIMNTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTPDYFCGQTCLPVSELIE 504

Query:   348 GIRAVPLHDRKGERYKSVKLLMHFEF 373
             GIRAVPL+D +G+   S  LL  F++
Sbjct:   505 GIRAVPLYDERGKACSSTMLLTRFKW 530

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=ISS;IMP

GO:0005634 "nucleus" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

GO:0035556 "intracellular signal transduction" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0010286 "heat acclimation" evidence=IMP

GO:0055074 "calcium ion homeostasis" evidence=IMP

UNIPROTKB|E1BJE0 PLCD3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 395 (144.1 bits), Expect = 4.4e-39, Sum P(2) = 4.4e-39
 Identities = 94/243 (38%), Positives = 128/243 (52%)

Query:   130 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 189
             V P   +  SLSE++ +  +   GN  VR   R+L R+YP G+R++S+NY+P   W+ G 
Sbjct:   543 VPPQPCQVSSLSERKAKKLIREAGNSFVRHNARHLTRVYPLGLRMNSANYSPQEMWNSGC 602

Query:   190 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKV 249
             Q+VA N Q  G  + L  G F  NG CGY+ KP  L    P N  FDP+   P + TL +
Sbjct:   603 QLVALNFQTPGYEMDLNAGRFLVNGQCGYILKPVRL--RSP-NTTFDPECPGPPRTTLTI 659

Query:   250 TVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTK-TLEDNWIPSWNEEF 307
              V   +      P  + +   S  D   R+ I GVPAD   KKT   L + + P W +  
Sbjct:   660 QVLTAQ----QLPKLNTEKPNSIVDPLVRIEIHGVPADCARKKTNYVLNNGFNPRWGQTL 715

Query:   308 EFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKL 367
             EF L VPELAL+R  V +YD +  +DF GQ  LP+S LKQG R + L  + G       L
Sbjct:   716 EFQLRVPELALVRFVVEDYDATSPNDFVGQFTLPLSSLKQGYRHIHLLSKDGASLSPATL 775

Query:   368 LMH 370
              +H
Sbjct:   776 FVH 778

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

GO:0042127 "regulation of cell proliferation" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39033	PLCD2_ARATH	3, ., 1, ., 4, ., 1, 1	0.7333	0.9866	0.6351	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.4.11	0.914
3rd Layer	3.1.4	0.921

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00101828	hypothetical protein (587 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_I1618	hypothetical protein (586 aa)						•	•	•	0.915
	fgenesh4_pm.C_LG_X000745	phosphoinositide phospholipase C (EC-3.1.4.11) (571 aa)						•	•	•	0.915
	eugene3.00080618	hypothetical protein (590 aa)						•	•	•	0.915
	fgenesh4_pm.C_LG_VIII000270	phosphoinositide phospholipase C (EC-3.1.4.11) (590 aa)						•	•	•	0.914
	fgenesh4_pg.C_LG_I001629	hypothetical protein (573 aa)						•	•	•	0.914
	gw1.IX.3737.1	hypothetical protein (573 aa)						•	•	•	0.910
	fgenesh4_pm.C_LG_XII000263	hypothetical protein (810 aa)						•	•		0.901
	gw1.XVII.1286.1	hypothetical protein (419 aa)						•			0.899
	gw1.VII.2836.1	hypothetical protein (536 aa)						•			0.899
	gw1.V.5135.1	hypothetical protein (727 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	374
PLN02222	581	PLN02222, PLN02222, phosphoinositide phospholipase	0.0
PLN02952	599	PLN02952, PLN02952, phosphoinositide phospholipase	0.0
PLN02230	598	PLN02230, PLN02230, phosphoinositide phospholipase	1e-168
PLN02228	567	PLN02228, PLN02228, Phosphoinositide phospholipase	1e-155
PLN02223	537	PLN02223, PLN02223, phosphoinositide phospholipase	5e-86
smart00149	115	smart00149, PLCYc, Phospholipase C, catalytic doma	2e-60
cd00275	128	cd00275, C2_PLC_like, C2 domain present in Phospho	1e-43
cd08599	228	cd08599, PI-PLCc_plant, Catalytic domain of plant	2e-37
pfam00387	117	pfam00387, PI-PLC-Y, Phosphatidylinositol-specific	2e-37
cd08558	226	cd08558, PI-PLCc_eukaryota, Catalytic domain of eu	4e-33
pfam00168	85	pfam00168, C2, C2 domain	5e-21
smart00239	101	smart00239, C2, Protein kinase C conserved region	6e-21
cd08594	227	cd08594, PI-PLCc_eta, Catalytic domain of metazoan	7e-20
cd08593	257	cd08593, PI-PLCc_delta, Catalytic domain of metazo	1e-17
cd08598	231	cd08598, PI-PLC1c_yeast, Catalytic domain of putat	3e-16
cd08631	258	cd08631, PI-PLCc_delta4, Catalytic domain of metaz	1e-15
cd08633	254	cd08633, PI-PLCc_eta2, Catalytic domain of metazoa	5e-15
cd08632	253	cd08632, PI-PLCc_eta1, Catalytic domain of metazoa	7e-15
cd08592	229	cd08592, PI-PLCc_gamma, Catalytic domain of metazo	7e-14
cd08596	254	cd08596, PI-PLCc_epsilon, Catalytic domain of meta	2e-13
cd08595	257	cd08595, PI-PLCc_zeta, Catalytic domain of metazoa	2e-13
cd08591	257	cd08591, PI-PLCc_beta, Catalytic domain of metazoa	3e-13
cd08628	254	cd08628, PI-PLCc_gamma2, Catalytic domain of metaz	7e-13
cd08626	257	cd08626, PI-PLCc_beta4, Catalytic domain of metazo	3e-12
cd08630	258	cd08630, PI-PLCc_delta3, Catalytic domain of metaz	1e-11
cd08599	228	cd08599, PI-PLCc_plant, Catalytic domain of plant	4e-11
cd08629	258	cd08629, PI-PLCc_delta1, Catalytic domain of metaz	6e-11
cd08623	258	cd08623, PI-PLCc_beta1, Catalytic domain of metazo	9e-11
cd08597	260	cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of	1e-10
cd08625	258	cd08625, PI-PLCc_beta3, Catalytic domain of metazo	3e-10
cd08627	229	cd08627, PI-PLCc_gamma1, Catalytic domain of metaz	8e-10
cd00030	102	cd00030, C2, C2 domain	9e-10
cd08624	261	cd08624, PI-PLCc_beta2, Catalytic domain of metazo	1e-09
cd04025	123	cd04025, C2B_RasA1_RasA4, C2 domain second repeat	4e-07
pfam00388	145	pfam00388, PI-PLC-X, Phosphatidylinositol-specific	2e-06
cd04026	131	cd04026, C2_PKC_alpha_gamma, C2 domain in Protein	3e-06
cd04040	115	cd04040, C2D_Tricalbin-like, C2 domain fourth repe	5e-06
cd08558	226	cd08558, PI-PLCc_eukaryota, Catalytic domain of eu	9e-06
COG5038	1227	COG5038, COG5038, Ca2+-dependent lipid-binding pro	3e-05
cd08675	137	cd08675, C2B_RasGAP, C2 domain second repeat of Ra	4e-05
cd04042	121	cd04042, C2A_MCTP_PRT, C2 domain first repeat foun	2e-04
cd08373	127	cd08373, C2A_Ferlin, C2 domain first repeat in Fer	7e-04
cd04032	127	cd04032, C2_Perforin, C2 domain of Perforin	7e-04
cd04038	145	cd04038, C2_ArfGAP, C2 domain present in Arf GTPas	0.001
cd00276	134	cd00276, C2B_Synaptotagmin, C2 domain second repea	0.001
cd08391	121	cd08391, C2A_C2C_Synaptotagmin_like, C2 domain fir	0.001
smart00148	143	smart00148, PLCXc, Phospholipase C, catalytic doma	0.001
cd04030	127	cd04030, C2C_KIAA1228, C2 domain third repeat pres	0.002
cd04024	128	cd04024, C2A_Synaptotagmin-like, C2 domain first r	0.003
cd08384	133	cd08384, C2B_Rabphilin_Doc2, C2 domain second repe	0.003

>gnl|CDD|177868 PLN02222, PLN02222, phosphoinositide phospholipase C 2

 Score =  601 bits (1550), Expect = 0.0
 Identities = 273/375 (72%), Positives = 311/375 (82%), Gaps = 6/375 (1%)

Query: 1   MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 59
           MVT+  GEILFTP   E LKEFPSP SLK+RIIISTKPPKEY E K+++      Q+GK 
Sbjct: 212 MVTEIFGEILFTPPVGESLKEFPSPNSLKKRIIISTKPPKEYKEGKDDEV----VQKGKD 267

Query: 60  SADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGK 119
             DEE WG+EVP+    N S  DK+D +G  D+D++D +DKS+ N  P+Y+ LIAIHAGK
Sbjct: 268 LGDEEVWGREVPSFIQRNKSV-DKNDSNGDDDDDDDDGEDKSKKNAPPQYKHLIAIHAGK 326

Query: 120 PKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 179
           PKGG+ ECLKVDPDKVRRLSLSE+QLE A   Y   IVRFTQ NLLRIYPKG RV SSNY
Sbjct: 327 PKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNY 386

Query: 180 NPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 239
           NPL+GWSHGAQMVAFNMQG+GRSLWLM GMFRANGGCGY+KKP+ LL++G  +++FDPK 
Sbjct: 387 NPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKA 446

Query: 240 KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 299
            LP K TL+VT+YMGEGWY+DF HTHFD YSPPDFY RVGIAGVP DTVMKKTKTLEDNW
Sbjct: 447 TLPVKTTLRVTIYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNW 506

Query: 300 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKG 359
           IP+W+E FEFPL+VPELALLR+EVHEYDMSEKDDFGGQTCLPV EL QGIRA PLH RKG
Sbjct: 507 IPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPVWELSQGIRAFPLHSRKG 566

Query: 360 ERYKSVKLLMHFEFI 374
           E+YKSVKLL+  EF+
Sbjct: 567 EKYKSVKLLVKVEFV 581

Length = 581

>gnl|CDD|178538 PLN02952, PLN02952, phosphoinositide phospholipase C

 Score =  551 bits (1421), Expect = 0.0
 Identities = 239/374 (63%), Positives = 288/374 (77%), Gaps = 6/374 (1%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M TQ  G++L+ P S+ L +FPSPESLK RIIISTKPPKEYLE+      +  +      
Sbjct: 232 MATQIFGQMLYYPESDSLVQFPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSG 291

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
            +     +E   L+S+        + D   D+D++D  +KS   + P Y++LI IHAGKP
Sbjct: 292 RNSSEETEEAQTLESMLFEQ----EADSRSDSDQDD--NKSGELQKPAYKRLITIHAGKP 345

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           KG LK+ +KV  DKVRRLSLSEQ+LE A  T G D+VRFTQRN+LRIYPKG R+ SSNY 
Sbjct: 346 KGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSNYK 405

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           PLIGW HGAQM+AFNMQG+G+SLWLMHGMFRANGGCGY+KKP+FL++ G H+EVFDPK K
Sbjct: 406 PLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKK 465

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP KKTLKV VY+G+GW  DF HTHFD+YSPPDFY ++ I GVPAD   KKTK +EDNW 
Sbjct: 466 LPVKKTLKVKVYLGDGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWY 525

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           P+WNEEF FPL+VPELALLRIEV EYDMSEKDDFGGQTCLPVSEL+ GIR+VPLHD+KGE
Sbjct: 526 PAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGE 585

Query: 361 RYKSVKLLMHFEFI 374
           + K+V+LLM F F+
Sbjct: 586 KLKNVRLLMRFIFV 599

Length = 599

>gnl|CDD|177875 PLN02230, PLN02230, phosphoinositide phospholipase C 4

 Score =  482 bits (1241), Expect = e-168
 Identities = 237/378 (62%), Positives = 289/378 (76%), Gaps = 6/378 (1%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+TQT G++L+   SE  +EFPSPE LK +I+ISTKPPKEYLEA + KEK+N  ++GK S
Sbjct: 223 MITQTFGDMLYYHDSEGCQEFPSPEELKEKILISTKPPKEYLEANDAKEKDN-GEKGKDS 281

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEED----SDDKSQHNEAPEYRKLIAIH 116
            DE+ WGKE  +L S  +           ++ D+E+      D S   +APEY++LIAIH
Sbjct: 282 -DEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIH 340

Query: 117 AGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDS 176
           AGKPKGGL+  LKVDP+K+RRLSLSEQ LE AV +YG D++RFTQ+N LRIYPKG R +S
Sbjct: 341 AGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNS 400

Query: 177 SNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFD 236
           SNY P IGW  GAQM+AFNMQG+GR+LWLM GMFRANGGCGYVKKP+FL+  GP+ + F 
Sbjct: 401 SNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFY 460

Query: 237 PKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE 296
           PK     KKTLKV V MG+GW  DF  THFD+YSPPDF+ RVGIAG P D VM+KTK   
Sbjct: 461 PKDNSCPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEY 520

Query: 297 DNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHD 356
           D W P WN+EF FPL+VPELALLR+EVHE+D++EKDDFGGQTCLPVSE++QGI AVPL +
Sbjct: 521 DTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFN 580

Query: 357 RKGERYKSVKLLMHFEFI 374
           RKG +Y S +LLM FEF+
Sbjct: 581 RKGVKYSSTRLLMRFEFV 598

Length = 598

>gnl|CDD|177873 PLN02228, PLN02228, Phosphoinositide phospholipase C

 Score =  448 bits (1154), Expect = e-155
 Identities = 203/372 (54%), Positives = 246/372 (66%), Gaps = 29/372 (7%)

Query: 1   MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGS 60
           M+T+T   +LF   SE  K FPSPE LK +I+ISTKPPKEYLE+K  +     +      
Sbjct: 215 MLTKTFRGMLFRCTSESTKHFPSPEELKNKILISTKPPKEYLESKTVQTTRTPT------ 268

Query: 61  ADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKP 120
             E +W +    +    N               EE  D++S   EA  YR LIAIHA   
Sbjct: 269 VKETSWKR----VADAENKI------------LEEYKDEES---EAVGYRDLIAIHAANC 309

Query: 121 KGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 180
           K  LK+CL  DP+K  R+S+ EQ LE  V T G D+VRFTQRNL+RIYPKG RVDSSNY+
Sbjct: 310 KDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYD 369

Query: 181 PLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK 240
           P +GW+HGAQMVAFNMQGHG+ LW+M GMFRANGGCGYVKKP  LL       +FDP  +
Sbjct: 370 PHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKR 426

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP K TLKV +Y GEGW  DF  THFD YSPPDF+ ++GIAGVP DTV  +T+T  D W 
Sbjct: 427 LPIKTTLKVKIYTGEGWDLDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWF 486

Query: 301 PSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKG 359
           P W N+EF F L VPELALL  +V +YD   ++DF GQTCLP+ ELK G+RAV LHDR G
Sbjct: 487 PIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRAG 546

Query: 360 ERYKSVKLLMHF 371
           + YK+ +LL+ F
Sbjct: 547 KAYKNTRLLVSF 558

Length = 567

>gnl|CDD|165867 PLN02223, PLN02223, phosphoinositide phospholipase C

 Score =  269 bits (690), Expect = 5e-86
 Identities = 147/375 (39%), Positives = 196/375 (52%), Gaps = 56/375 (14%)

Query: 1   MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 59
           M+ QT G++++       L+EFPSP  L+ +I+IS +PPKE L AK              
Sbjct: 216 MIDQTFGDMVYHEDPQHSLEEFPSPAELQNKILISRRPPKELLYAK-------------- 261

Query: 60  SADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGK 119
                                      DGGV    E   +  +      Y+ L+  HA +
Sbjct: 262 -------------------------ADDGGVGVRNEL--EIQEGPADKNYQSLVGFHAVE 294

Query: 120 PKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDS-SN 178
           P+G L++ L    D +++            G Y  DI+ FTQ+  LR  PK   +   + 
Sbjct: 295 PRGMLQKALTGKADDIQQ-----------PGWYERDIISFTQKKFLRTRPKKKNLLINAP 343

Query: 179 YNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPK 238
           Y P   W HGAQ++A + +     LWLM GMFRANGGCGYVKKP+FLL  GP   VF P 
Sbjct: 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPT 402

Query: 239 VKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN 298
                 K LKV +YMG+GW  DF        S PD Y R+ IAGVP D  + KT    + 
Sbjct: 403 ENPVVVKILKVKIYMGDGWIVDF-KKRIGRLSKPDLYVRISIAGVPHDEKIMKTTVKNNE 461

Query: 299 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRK 358
           W P+W EEF FPL+ P+LAL+  EV++Y++S  D F GQTCLPVSEL +GIRAVPL+D +
Sbjct: 462 WKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDER 521

Query: 359 GERYKSVKLLMHFEF 373
           G+   S  LL  F++
Sbjct: 522 GKACSSTMLLTRFKW 536

Length = 537

>gnl|CDD|128454 smart00149, PLCYc, Phospholipase C, catalytic domain (part); domain Y

 Score =  190 bits (485), Expect = 2e-60
 Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 1/114 (0%)

Query: 112 LIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKG 171
           L+   A       +     +P      S SE + +  +     D VR+ QR L R+YPKG
Sbjct: 3   LVIYCAPVKFRSFESAESKNP-FYEMSSFSETKAKKLLKKSPTDFVRYNQRQLSRVYPKG 61

Query: 172 IRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFL 225
            RVDSSNYNP + W+HG QMVA N Q   + + L  GMFRANGGCGYV KP+FL
Sbjct: 62  TRVDSSNYNPQVFWNHGCQMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL 115

Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 115

>gnl|CDD|175974 cd00275, C2_PLC_like, C2 domain present in Phosphoinositide-specific phospholipases C (PLC)

 Score =  147 bits (373), Expect = 1e-43
 Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 7/132 (5%)

Query: 244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNWI-P 301
             TL + +  G+      P    D  S  D Y  V I G+PA D+   KTK +++N   P
Sbjct: 1   PLTLTIKIISGQQL----PKPKGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNP 56

Query: 302 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 361
            WNE FEF ++VPELA LR  V++ D    DDF GQ CLP+  L+QG R VPL D KGE 
Sbjct: 57  VWNETFEFDVTVPELAFLRFVVYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEP 115

Query: 362 YKSVKLLMHFEF 373
            +   L +H + 
Sbjct: 116 LELSTLFVHIDI 127

PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-II topology. Length = 128

>gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C

 Score =  134 bits (339), Expect = 2e-37
 Identities = 46/81 (56%), Positives = 59/81 (72%), Gaps = 1/81 (1%)

Query: 134 KVRRLSLSEQQLENAVGT-YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMV 192
            V R SLSE QL+  +   +  D++ FTQ+NLLR+YP G+R+ SSNY+P++ W HGAQMV
Sbjct: 148 PVIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMV 207

Query: 193 AFNMQGHGRSLWLMHGMFRAN 213
           A NMQG+ R LWL  G FRAN
Sbjct: 208 ALNMQGYDRPLWLNRGKFRAN 228

This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228

>gnl|CDD|215891 pfam00387, PI-PLC-Y, Phosphatidylinositol-specific phospholipase C, Y domain

 Score =  130 bits (329), Expect = 2e-37
 Identities = 40/87 (45%), Positives = 51/87 (58%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S SE + +  +     + V+  +R L R+YPKG+RVDSSNY+P   W+ G QMVA N Q 
Sbjct: 30  SFSETKAKKLLKESPAEFVKHNRRQLSRVYPKGLRVDSSNYDPQPFWNAGCQMVALNWQT 89

Query: 199 HGRSLWLMHGMFRANGGCGYVKKPNFL 225
               + L   MF  NG CGYV KP FL
Sbjct: 90  PDLGMQLNEAMFADNGRCGYVLKPEFL 116

This associates with pfam00388 to form a single structural unit. Length = 117

>gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins

 Score =  122 bits (310), Expect = 4e-33
 Identities = 32/75 (42%), Positives = 41/75 (54%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S SE +    +     + V++ +R L R+YPKG RVDSSNYNP   W+ G QMVA N Q 
Sbjct: 152 SFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQT 211

Query: 199 HGRSLWLMHGMFRAN 213
               + L  G F  N
Sbjct: 212 PDLPMQLNQGKFEQN 226

This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226

>gnl|CDD|215765 pfam00168, C2, C2 domain

 Score = 85.8 bits (213), Expect = 5e-21
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 8/93 (8%)

Query: 247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE 306
           L+VTV   +           D     D Y +V + G   DT  KKTK +++   P WNE 
Sbjct: 1   LRVTVISAKNL------PPKDLNGKSDPYVKVSLGGQKKDT--KKTKVVKNTLNPVWNET 52

Query: 307 FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTC 339
           F F +++PELA LRIEV++YD   KDDF G+  
Sbjct: 53  FTFEVTLPELAELRIEVYDYDRFGKDDFIGEVT 85

Length = 85

>gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB)

 Score = 86.4 bits (214), Expect = 6e-21
 Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 305
           TL V +               D     D Y +V + G P     KKTK +++   P WNE
Sbjct: 1   TLTVKIISARNL------PPKDKGGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNE 52

Query: 306 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPL 354
            FEF +  PELA L IEV++ D   +DDF GQ  +P+S+L  G R   L
Sbjct: 53  TFEFEVPPPELAELEIEVYDKDRFGRDDFIGQVTIPLSDLLLGGRHEKL 101

Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotagmins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles. Length = 101

>gnl|CDD|176536 cd08594, PI-PLCc_eta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta

 Score = 87.2 bits (216), Expect = 7e-20
 Identities = 35/76 (46%), Positives = 41/76 (53%)

Query: 138 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 197
            S SE +    V       +RF QR L RIYP   R+DSSN+NP   W+ G Q+VA N Q
Sbjct: 152 SSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQ 211

Query: 198 GHGRSLWLMHGMFRAN 213
             GR L L    FRAN
Sbjct: 212 TEGRMLQLNRAKFRAN 227

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are two PI-PLC-eta isozymes (1-2), both neuron-specific enzymes. They function as calcium sensors that are activated by small increases in intracellular calcium concentrations. The PI-PLC-eta isozymes are also activated through GPCR stimulation. Aside from the PI-PLC-eta isozymes identified in mammals, their eukaryotic homologs are also present in this family. Length = 227

>gnl|CDD|176535 cd08593, PI-PLCc_delta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 34/75 (45%), Positives = 43/75 (57%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S SE +        GN+ VR  +R L RIYP G+R DSSNY+P   W+ G Q+VA N Q 
Sbjct: 183 SFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQT 242

Query: 199 HGRSLWLMHGMFRAN 213
            G  + L  G+FR N
Sbjct: 243 PGEEMDLNDGLFRQN 257

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Different PI-PLC-delta isozymes have different tissue distribution and different subcellular locations. PI-PLC-delta1 is mostly a cytoplasmic protein, PI-PLC-delta3 is located in the membrane, and PI-PLC-delta4 is predominantly detected in the cell nucleus. Aside from three PI-PLC-delta isozymes identified in mammals, some eukaryotic PI-PLC-delta homologs have been classified to this CD. Length = 257

>gnl|CDD|176540 cd08598, PI-PLC1c_yeast, Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C

 Score = 76.9 bits (190), Expect = 3e-16
 Identities = 29/75 (38%), Positives = 42/75 (56%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           SLSE+ L   +      + +  +R+L+R+YP G R+ SSN+NPL  W  G QMVA N Q 
Sbjct: 157 SLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQT 216

Query: 199 HGRSLWLMHGMFRAN 213
           +   + L   MF  +
Sbjct: 217 YDLGMQLNEAMFAGS 231

This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes from Saccharomyces cerevisiae. Plc1p contains both highly conserved X- and Y- regions of PLC catalytic core domain, as well as a presumptive EF-hand like calcium binding motif. Experiments show that Plc1p displays calcium dependent catalytic properties with high similarity to those of the mammalian PLCs, and plays multiple roles in modulating the membrane/protein interactions in filamentation control. CaPlc1p encoded by CAPLC1 from the closely related yeast Candida albicans, an orthologue of S. cerevisiae Plc1p, is also included in this group. Like Plc1p, CaPlc1p has conserved presumptive catalytic domain, shows PLC activity when expressed in E. coli, and is involved in multiple cellular processes. There are two other gene copies of CAPLC1 in C. albicans, CAPLC2 (also named as PIPLC) and CAPLC3. Experiments show CaPlc1p is the only enzyme in C. albicans which functions as PLC. The biological functions of CAPLC2 and CAPLC3 gene products must be clearly different from CaPlc1p, but their exact roles remain unclear. Moreover, CAPLC2 and CAPLC3 gene products are more similar to extracellular bacterial PI-PLC than to the eukaryotic PI-PLC, and they are not included in this subfamily. Length = 231

>gnl|CDD|176568 cd08631, PI-PLCc_delta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4

 Score = 75.4 bits (185), Expect = 1e-15
 Identities = 32/75 (42%), Positives = 42/75 (56%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S +E +    +   GN+ V+     L R+YP G+R DSSNYNP   W+ G QMVA N Q 
Sbjct: 184 SFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQT 243

Query: 199 HGRSLWLMHGMFRAN 213
            G  + L  G+FR N
Sbjct: 244 AGLEMDLNDGLFRQN 258

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 1 and 3, a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus, is not present in PI-PLC-delta4. Experiments show PI-PLC-delta4 is required for the acrosome reaction in fertilization. Length = 258

>gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2

 Score = 73.5 bits (180), Expect = 5e-15
 Identities = 36/75 (48%), Positives = 40/75 (53%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S SE +    +       +RF QR L RIYP   RVDSSNYNP   W+ G QMVA N Q 
Sbjct: 180 SFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQS 239

Query: 199 HGRSLWLMHGMFRAN 213
            GR L L    F AN
Sbjct: 240 EGRMLQLNRAKFSAN 254

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta2 is a neuron-specific enzyme and expressed in the brain. It may in part function downstream of G-protein-coupled receptors and play an important role in the formation and maintenance of the neuronal network in the postnatal brain. Length = 254

>gnl|CDD|176569 cd08632, PI-PLCc_eta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1

 Score = 73.5 bits (180), Expect = 7e-15
 Identities = 31/76 (40%), Positives = 40/76 (52%)

Query: 138 LSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 197
           LS SE +    V       + + Q+ L RIYP   R+DSSN+NPL  W+ G Q+VA N Q
Sbjct: 178 LSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQ 237

Query: 198 GHGRSLWLMHGMFRAN 213
             GR + L    F  N
Sbjct: 238 SEGRMMQLNRAKFMVN 253

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif, a potential interaction site for other signaling proteins. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-eta1 is a neuron-specific enzyme and expressed in only nerve tissues such as the brain and spinal cord. It may perform a fundamental role in the brain. Length = 253

>gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma

 Score = 70.1 bits (172), Expect = 7e-14
 Identities = 27/62 (43%), Positives = 39/62 (62%)

Query: 152 YGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFR 211
            G   +++ +R L R+YPKG RVDSSNY+P+  W+ G+QMVA N Q   + + L   +F 
Sbjct: 168 KGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQALFM 227

Query: 212 AN 213
            N
Sbjct: 228 LN 229

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. There are two PI-PLC-gamma isozymes (1-2). They are activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Aside from the two PI-PLC-gamma isozymes identified in mammals, some eukaryotic PI-PLC-gamma homologs have been classified with this subfamily. Length = 229

>gnl|CDD|176538 cd08596, PI-PLCc_epsilon, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon

 Score = 69.5 bits (170), Expect = 2e-13
 Identities = 33/75 (44%), Positives = 41/75 (54%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           SL+E   +     Y   +V+ T+  LLR YP   R+DSSN NPLI W HG Q+VA N Q 
Sbjct: 180 SLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQT 239

Query: 199 HGRSLWLMHGMFRAN 213
               + L   MF AN
Sbjct: 240 DDLPMHLNAAMFEAN 254

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and two predicted RA (Ras association) domains that are implicated in the binding of small GTPases, such as Ras or Rap, from the Ras family. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PI-PLC-epsilon isozyme (1). PI-PLC-epsilon is activated by G alpha(12/13), G beta gamma, and activated members of Ras and Rho small GTPases. Aside from PI-PLC-epsilon identified in mammals, its eukaryotic homologs have been classified with this family. Length = 254

>gnl|CDD|176537 cd08595, PI-PLCc_zeta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta

 Score = 69.2 bits (169), Expect = 2e-13
 Identities = 34/75 (45%), Positives = 42/75 (56%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S+ E +    + + G D V  TQR + RIYPKG R  SSNYNP   W+ G QMVA N Q 
Sbjct: 183 SIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQT 242

Query: 199 HGRSLWLMHGMFRAN 213
            G  + L +G F  N
Sbjct: 243 LGAPMDLQNGKFLDN 257

This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There is one PLC-zeta isozyme (1). PLC-zeta plays a fundamental role in vertebrate fertilization by initiating intracellular calcium oscillations that trigger the embryo development. However, the mechanism of its activation still remains unclear. Aside from PI-PLC-zeta identified in mammals, its eukaryotic homologs have been classified with this family. Length = 257

>gnl|CDD|176533 cd08591, PI-PLCc_beta, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 32/75 (42%), Positives = 40/75 (53%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S +E +    +     + V + +R L RIYPKG RVDSSNY P I W+ G QMVA N Q 
Sbjct: 183 SFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQT 242

Query: 199 HGRSLWLMHGMFRAN 213
               + L  G F  N
Sbjct: 243 PDLPMQLNQGKFEYN 257

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are four PLC-beta isozymes (1-4). They are activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. The beta-gamma subunits of heterotrimeric G proteins are known to activate the PLC-beta2 and -beta3 isozymes only. Aside from four PLC-beta isozymes identified in mammals, some eukaryotic PLC-beta homologs have been classified into this subfamily, such as NorpA and PLC-21 from Drosophila and PLC-beta from turkey, Xenopus, sponge, and hydra. Length = 257

>gnl|CDD|176565 cd08628, PI-PLCc_gamma2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2

 Score = 67.4 bits (164), Expect = 7e-13
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 7/112 (6%)

Query: 108 EYRKLIAIHAG------KPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQ 161
           +++KLIAI         KP    K+ L+ +PD     S  E +  + +      ++++ +
Sbjct: 144 KHKKLIAIELSDLVVYCKPTSKTKDNLE-NPDFKEIRSFVETKAPSIIRQKPVQLLKYNR 202

Query: 162 RNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213
           + L R+YPKG RVDSSNY+P   W  G+QMVA N Q   + + L H +F  N
Sbjct: 203 KGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN 254

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma2, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma2 is highly expressed in cells of hematopoietic origin. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Unlike PI-PLC-gamma1, the activation of PI-PLC-gamma2 may require concurrent stimulation of PI 3-kinase. Length = 254

>gnl|CDD|176563 cd08626, PI-PLCc_beta4, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4

 Score = 65.6 bits (160), Expect = 3e-12
 Identities = 31/75 (41%), Positives = 40/75 (53%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S +E      + T   + V + +R + RIYPKG RVDSSNY P I W+ G QMV+ N Q 
Sbjct: 183 SFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQT 242

Query: 199 HGRSLWLMHGMFRAN 213
               + L  G F  N
Sbjct: 243 PDLGMQLNQGKFEYN 257

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta4 is expressed in high concentrations in cerebellar Purkinje and granule cells, the median geniculate body, and the lateral geniculate nucleus. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 257

>gnl|CDD|176567 cd08630, PI-PLCc_delta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3

 Score = 63.9 bits (155), Expect = 1e-11
 Identities = 31/75 (41%), Positives = 44/75 (58%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           SLSE++ +  +   GN  VR   R L R+YP G+R++S+NY+P   W+ G Q+VA N Q 
Sbjct: 184 SLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQT 243

Query: 199 HGRSLWLMHGMFRAN 213
            G  + L  G F  N
Sbjct: 244 PGYEMDLNAGRFLVN 258

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1 and 3 from the cell nucleus. Length = 258

>gnl|CDD|176541 cd08599, PI-PLCc_plant, Catalytic domain of plant phosphatidylinositide-specific phospholipases C

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 1   MVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 50
           ++ +TLG+ LF P SE   +EFPSPE LK +I+IS KPP       E + K
Sbjct: 110 ILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPPVIRNSLSETQLK 160

This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, which lacks the N-terminal pleckstrin homology (PH) domain, but contains EF-hand like motifs (which are absent in a few plant PLCs), a PLC catalytic core domain with X- and Y- highly conserved regions split by a linker sequence, and a C2 domain. However, at the sequence level, the plant PI-PLCs are closely related to the mammalian PLC-delta isoform. Experiments show that plant PLCs display calcium dependent PLC catalytic properties, although they lack some of the N-terminal motifs found in their mammalian counterparts. A putative calcium binding site may be located at the region spanning the X- and Y- domains. Length = 228

>gnl|CDD|176566 cd08629, PI-PLCc_delta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1

 Score = 62.0 bits (150), Expect = 6e-11
 Identities = 28/61 (45%), Positives = 35/61 (57%)

Query: 153 GNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRA 212
           GN  VR     L RIYP G R DSSNY+P+  W+ G Q+VA N Q  G  + +  G F+ 
Sbjct: 198 GNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQD 257

Query: 213 N 213
           N
Sbjct: 258 N 258

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain which is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. There are three PI-PLC-delta isozymes (1,3 and 4). PI-PLC-delta1 is relatively well characterized. It is activated by high calcium levels generated by other PI-PLC family members, and therefore functions as a calcium amplifier within the cell. Unlike PI-PLC-delta 4, PI-PLC-delta1 and 3 possess a putative nuclear export sequence (NES) located in the EF-hand domain, which may be responsible transporting PI-PLC-delta1and 3 from the cell nucleus. Experiments show PI-PLC-delta1 is essential for normal hair formation. Length = 258

>gnl|CDD|176560 cd08623, PI-PLCc_beta1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1

 Score = 61.3 bits (148), Expect = 9e-11
 Identities = 28/59 (47%), Positives = 36/59 (61%)

Query: 155 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213
           + V + +  L RIYPKG RVDSSNY P + W+ G QMVA N Q    S+ +  GM+  N
Sbjct: 200 EFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMGMYEYN 258

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta1 is expressed at highest levels in specific regions of the brain. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. Length = 258

>gnl|CDD|176539 cd08597, PI-PLCc_PRIP_metazoa, Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 30/75 (40%), Positives = 39/75 (52%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S SE         +  D V + ++ L R+YP  +RVDSSNYNP   W+ G Q+VA N Q 
Sbjct: 186 SFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQT 245

Query: 199 HGRSLWLMHGMFRAN 213
            G  + L  G F  N
Sbjct: 246 PGLMMDLNTGKFLEN 260

This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiments show both, PRIP-1 and PRIP-2, are involved in InsP3-mediated calcium signaling pathway and GABA(A)receptor-mediated signaling pathway. In addition, PRIP-2 acts as a negative regulator of B-cell receptor signaling and immune responses. Length = 260

>gnl|CDD|176562 cd08625, PI-PLCc_beta3, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3

 Score = 59.7 bits (144), Expect = 3e-10
 Identities = 28/59 (47%), Positives = 37/59 (62%)

Query: 155 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN 213
           + V + ++ L RIYPKG RVDSSNY P + W+ G QMVA N Q    ++ L  G+F  N
Sbjct: 200 EFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGVFEYN 258

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta3 is widely expressed at highest levels in brain, liver, and parotid gland. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 258

>gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1

 Score = 58.1 bits (140), Expect = 8e-10
 Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 139 SLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 197
           S  E + E  V  + G   +++ +R L RIYPKG R+DSSNY+PL  W  G+Q+VA N Q
Sbjct: 154 SFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQ 213

Query: 198 GHGRSLWLMHGMFRAN 213
              + + +   +F   
Sbjct: 214 TPDKPMQMNQALFMLG 229

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. Unique to PI-PLC-gamma1, a second PH domain, two SH2 (Src homology 2) regions, and one SH3 (Src homology 3) region is present within this linker region. PI-PLC-gamma1 is ubiquitously expressed. It is activated by receptor and non-receptor tyrosine kinases due to the presence of two SH2 and a single SH3 domain within the linker region. Length = 229

>gnl|CDD|175973 cd00030, C2, C2 domain

 Score = 55.2 bits (133), Expect = 9e-10
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326
           D     D Y +V + G        KTK +++   P WNE FEFP+  PE   L +EV + 
Sbjct: 15  DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70

Query: 327 DMSEKDDFGGQTCLPVSELKQ 347
           D   KDDF G+  +P+SEL  
Sbjct: 71  DRFSKDDFLGEVEIPLSELLD 91

The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 102

>gnl|CDD|176561 cd08624, PI-PLCc_beta2, Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2

 Score = 57.8 bits (139), Expect = 1e-09
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ 197
           S +E +  + +       V + +R + RIYPKG R+DSSNY P + W+ G QMVA N Q
Sbjct: 187 SFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQ 245

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homodimerization. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a highly degenerate linker sequence. PI-PLC-beta2 is expressed at highest levels in cells of hematopoietic origin. It is activated by the heterotrimeric G protein alpha q subunits through their C2 domain and long C-terminal extension. It is also activated by the beta-gamma subunits of heterotrimeric G proteins. Length = 261

>gnl|CDD|175991 cd04025, C2B_RasA1_RasA4, C2 domain second repeat present in RasA1 and RasA4

 Score = 48.3 bits (115), Expect = 4e-07
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)

Query: 287 TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 346
           +V+KK+        P WNE FEF L     + L +EV ++D+  K+DF G+    +  L+
Sbjct: 37  SVVKKSC------YPRWNEVFEFELMEGADSPLSVEVWDWDLVSKNDFLGKVVFSIQTLQ 90

Query: 347 Q 347
           Q
Sbjct: 91  Q 91

RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 123

>gnl|CDD|215892 pfam00388, PI-PLC-X, Phosphatidylinositol-specific phospholipase C, X domain

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 1   MVTQTLGEILFTP--GSECLKEFPSPESLKRRIIISTKP 37
           ++ +  G++L+TP    E   E PSPE LK +I++  K 
Sbjct: 107 ILKEIFGDMLYTPPLDDESSTELPSPEDLKGKILLKVKK 145

This associates with pfam00387 to form a single structural unit. Length = 145

>gnl|CDD|175992 cd04026, C2_PKC_alpha_gamma, C2 domain in Protein Kinase C (PKC) alpha and gamma

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 284 PADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-ELALLRIEVHEYDMSEKDDFGGQTCLPV 342
           P +   +KTKT++    P WNE F F L    +   L IEV ++D + ++DF G     V
Sbjct: 46  PKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEVWDWDRTTRNDFMGSLSFGV 105

Query: 343 SEL 345
           SEL
Sbjct: 106 SEL 108

A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 131

>gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL---K 346
              KTL     P WNE FE P+     A+L++EV+++D   KDD  G   + +S+L   +
Sbjct: 38  TIKKTLN----PVWNESFEVPVPSRVRAVLKVEVYDWDRGGKDDLLGSAYIDLSDLEPEE 93

Query: 347 QGIRAVPLHDRKGERYKSVKL 367
                +PL  + G +  +V L
Sbjct: 94  TTELTLPLDGQGGGKLGAVFL 114

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the fifth C2 repeat, C2E, and has a type-II topology. Length = 115

>gnl|CDD|176501 cd08558, PI-PLCc_eukaryota, Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins

 Score = 45.9 bits (110), Expect = 9e-06
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 1   MVTQTLGEILFT-PGSECLKEFPSPESLKRRIIISTKP 37
           ++ +  G+ L T P  E   + PSPE LK +I+I  K 
Sbjct: 110 ILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK 147

This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. The eukaryotic PI-PLCs have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains, such as the pleckstrin homology (PH) domain, EF-hand motif, and C2 domain. The catalytic core domain is a TIM barrel with two highly conserved regions (X and Y) split by a linker region. The catalytic mechanism of eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. The mammalian PI-PLCs consist of 13 isozymes, which are classified into six-subfamilies, PI-PLC-delta (1,3 and 4), -beta(1-4), -gamma(1,2), -epsilon, -zeta, and -eta (1,2). Ca2+ is required for the activation of all forms of mammalian PI-PLCs, and the concentration of calcium influences substrate specificity. This family also includes metazoan phospholipase C related but catalytically inactive proteins (PRIP), which belong to a group of novel inositol trisphosphate binding proteins. Due to the replacement of critical catalytic residues, PRIP does not have PLC enzymatic activity. Length = 226

>gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]

 Score = 45.5 bits (108), Expect = 3e-05
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 291  KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 348
            KTK ++    P WNEEF   +      +L I V+++D  EK+D  G   + +S+L+ G
Sbjct: 1076 KTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVNDWDSGEKNDLLGTAEIDLSKLEPG 1133

Length = 1227

>gnl|CDD|176057 cd08675, C2B_RasGAP, C2 domain second repeat of Ras GTPase activating proteins (GAPs)

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 16/90 (17%)

Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELA 317
           D +ARV      + T  K+TK  +    P ++E F F L++                E +
Sbjct: 20  DPFARV-TLNYSSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEEEDLEKS 78

Query: 318 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 347
            LR+E+    M   DDF G+  +P+  L+Q
Sbjct: 79  ELRVELWHASMVSGDDFLGEVRIPLQGLQQ 108

RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Members here have a type-I topology. Length = 137

>gnl|CDD|176007 cd04042, C2A_MCTP_PRT, C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 291 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-- 348
           K+KT+  N  P W+E+F  P+       L I+V +YD    DDF G   + +S L+    
Sbjct: 36  KSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFDYDRGLTDDFMGSAFVDLSTLELNKP 94

Query: 349 -IRAVPLHDRKGERYKSVKLL 368
               + L D   +       L
Sbjct: 95  TEVKLKLEDPNSDEDLGYISL 115

MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 121

>gnl|CDD|176019 cd08373, C2A_Ferlin, C2 domain first repeat in Ferlin

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 272 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL-ALLRIEVHEYDMS 329
            D  A+V   GV      KKT+ LE+   P WNE FE+PL   P+    L I V +Y+  
Sbjct: 15  GDRIAKVTFRGVK-----KKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEKV 69

Query: 330 EKDDFGGQTCLPVSEL 345
            ++   G   + + +L
Sbjct: 70  GRNRLIGSATVSLQDL 85

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-II topology. Length = 127

>gnl|CDD|175998 cd04032, C2_Perforin, C2 domain of Perforin

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 19/113 (16%)

Query: 242 PAKK---TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN 298
           P ++   TL VTV    G + D+       ++  D Y +V   G       K+T+ + +N
Sbjct: 22  PTRRGLATLTVTVLRATGLWGDY-------FTSTDGYVKVFFGGQ-----EKRTEVIWNN 69

Query: 299 WIPSWNEEFEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 350
             P WN  F+F  + +     LR EV + D    DD  G TC      + G+ 
Sbjct: 70  NNPRWNATFDFGSVELSPGGKLRFEVWDRDNGWDDDLLG-TC--SVVPEAGVH 119

Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 127

>gnl|CDD|176003 cd04038, C2_ArfGAP, C2 domain present in Arf GTPase Activating Proteins (GAP)

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEVHEYDMSEKDDFGG 336
            KT+ ++ N  P WNEE     SVP     L++EV + D   KDD  G
Sbjct: 35  VKTRVIKKNLNPVWNEELTL--SVPNPMAPLKLEVFDKDTFSKDDSMG 80

ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. Length = 145

>gnl|CDD|175975 cd00276, C2B_Synaptotagmin, C2 domain second repeat present in Synaptotagmin

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 267 DAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 322
           D     D Y +V +  +        KKT   +    P +NE F F +   +L    L I 
Sbjct: 30  DGKGLSDPYVKVSL--LQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87

Query: 323 VHEYDMSEKDDFGGQTCL 340
           V + D   +++  GQ  L
Sbjct: 88  VVDKDSVGRNEVIGQVVL 105

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 134

>gnl|CDD|176037 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain first and third repeat in Synaptotagmin-like proteins

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 291 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGI 349
           K+K +++N  P WNE +E  +       L IE+ + D  +KDDF G+  + +    K+G 
Sbjct: 42  KSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFDEDP-DKDDFLGRLSIDLGSVEKKGF 100

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains either the first or third repeat in Synaptotagmin-like proteins with a type-I topology. Length = 121

>gnl|CDD|197543 smart00148, PLCXc, Phospholipase C, catalytic domain (part); domain X

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 1   MVTQTLGEILFTPGSECLKE-FPSPESLKRRIIISTK 36
           M  +  G++L+TP      E  PSPE L+ +I++  +
Sbjct: 107 MFKEIFGDMLYTPPLTSSLEVLPSPEQLRGKILLKVR 143

Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme appears to be a homologue of the mammalian PLCs. Length = 143

>gnl|CDD|175996 cd04030, C2C_KIAA1228, C2 domain third repeat present in uncharacterized human KIAA1228-like proteins

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 323
           +KT   +DN  P ++E FEFP+S+ EL    ++V
Sbjct: 55  RKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88

KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the third C2 repeat, C2C, and has a type-II topology. Length = 127

>gnl|CDD|175990 cd04024, C2A_Synaptotagmin-like, C2 domain first repeat present in Synaptotagmin-like proteins

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 15/55 (27%), Positives = 29/55 (52%)

Query: 291 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
           KT+T+ +   P WN   EFP+   +  LL++ + + D     D+ G+  + + E+
Sbjct: 38  KTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLILWDKDRFAGKDYLGEFDIALEEV 92

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the first C2 repeat, C2A, and has a type-I topology. Length = 128

>gnl|CDD|176030 cd08384, C2B_Rabphilin_Doc2, C2 domain second repeat present in Rabphilin and Double C2 domain

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)

Query: 291 KTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGG 336
           K KTL     P +NEEF + +   +LA   L I V + D+ + +D+ G
Sbjct: 57  KKKTLN----PEFNEEFFYDIKHSDLAKKTLEITVWDKDIGKSNDYIG 100

Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions. This cd contains the second C2 repeat, C2B, and has a type-I topology. Length = 133

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	374
PLN02230	598	phosphoinositide phospholipase C 4	100.0
PLN02222	581	phosphoinositide phospholipase C 2	100.0
KOG0169	746	consensus Phosphoinositide-specific phospholipase	100.0
PLN02952	599	phosphoinositide phospholipase C	100.0
PLN02228	567	Phosphoinositide phospholipase C	100.0
PLN02223	537	phosphoinositide phospholipase C	100.0
KOG1265	1189	consensus Phospholipase C [Lipid transport and met	100.0
KOG1264	1267	consensus Phospholipase C [Lipid transport and met	100.0
cd08629	258	PI-PLCc_delta1 Catalytic domain of metazoan phosph	100.0
cd08630	258	PI-PLCc_delta3 Catalytic domain of metazoan phosph	100.0
cd08631	258	PI-PLCc_delta4 Catalytic domain of metazoan phosph	100.0
cd08595	257	PI-PLCc_zeta Catalytic domain of metazoan phosphoi	100.0
cd08597	260	PI-PLCc_PRIP_metazoa Catalytic domain of metazoan	100.0
cd08624	261	PI-PLCc_beta2 Catalytic domain of metazoan phospho	100.0
smart00149	115	PLCYc Phospholipase C, catalytic domain (part); do	100.0
PF00387	118	PI-PLC-Y: Phosphatidylinositol-specific phospholip	100.0
cd08633	254	PI-PLCc_eta2 Catalytic domain of metazoan phosphoi	100.0
cd08593	257	PI-PLCc_delta Catalytic domain of metazoan phospho	100.0
cd08632	253	PI-PLCc_eta1 Catalytic domain of metazoan phosphoi	100.0
cd08596	254	PI-PLCc_epsilon Catalytic domain of metazoan phosp	100.0
cd08628	254	PI-PLCc_gamma2 Catalytic domain of metazoan phosph	100.0
cd08625	258	PI-PLCc_beta3 Catalytic domain of metazoan phospho	100.0
cd08623	258	PI-PLCc_beta1 Catalytic domain of metazoan phospho	100.0
cd08626	257	PI-PLCc_beta4 Catalytic domain of metazoan phospho	100.0
cd08591	257	PI-PLCc_beta Catalytic domain of metazoan phosphoi	100.0
cd08592	229	PI-PLCc_gamma Catalytic domain of metazoan phospho	100.0
cd08594	227	PI-PLCc_eta Catalytic domain of metazoan phosphoin	100.0
cd08558	226	PI-PLCc_eukaryota Catalytic domain of eukaryotic p	100.0
cd08598	231	PI-PLC1c_yeast Catalytic domain of putative yeast	100.0
cd08627	229	PI-PLCc_gamma1 Catalytic domain of metazoan phosph	100.0
cd08599	228	PI-PLCc_plant Catalytic domain of plant phosphatid	100.0
cd00137	274	PI-PLCc Catalytic domain of prokaryotic and eukary	99.95
cd00275	128	C2_PLC_like C2 domain present in Phosphoinositide-	99.86
cd08395	120	C2C_Munc13 C2 domain third repeat in Munc13 (mamma	99.81
cd04036	119	C2_cPLA2 C2 domain present in cytosolic PhosphoLip	99.76
cd08682	126	C2_Rab11-FIP_classI C2 domain found in Rab11-famil	99.75
cd04042	121	C2A_MCTP_PRT C2 domain first repeat found in Multi	99.74
cd04016	121	C2_Tollip C2 domain present in Toll-interacting pr	99.73
cd08381	122	C2B_PI3K_class_II C2 domain second repeat present	99.73
cd08677	118	C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a	99.72
cd04019	150	C2C_MCTP_PRT_plant C2 domain third repeat found in	99.71
cd04015	158	C2_plant_PLD C2 domain present in plant phospholip	99.71
cd08379	126	C2D_MCTP_PRT_plant C2 domain fourth repeat found i	99.71
cd04022	127	C2A_MCTP_PRT_plant C2 domain first repeat found in	99.7
cd04029	125	C2A_SLP-4_5 C2 domain first repeat present in Syna	99.7
cd08406	136	C2B_Synaptotagmin-12 C2 domain second repeat prese	99.7
cd04010	148	C2B_RasA3 C2 domain second repeat present in RAS p	99.69
cd08377	119	C2C_MCTP_PRT C2 domain third repeat found in Multi	99.69
cd04039	108	C2_PSD C2 domain present in Phosphatidylserine dec	99.69
cd04033	133	C2_NEDD4_NEDD4L C2 domain present in the Human neu	99.69
cd04028	146	C2B_RIM1alpha C2 domain second repeat contained in	99.68
cd08392	128	C2A_SLP-3 C2 domain first repeat present in Synapt	99.68
cd08393	125	C2A_SLP-1_2 C2 domain first repeat present in Syna	99.68
cd08378	121	C2B_MCTP_PRT_plant C2 domain second repeat found i	99.68
cd08400	126	C2_Ras_p21A1 C2 domain present in RAS p21 protein	99.68
cd04041	111	C2A_fungal C2 domain first repeat; fungal group. C	99.67
cd08692	135	C2B_Tac2-N C2 domain second repeat found in Tac2-N	99.67
cd08376	116	C2B_MCTP_PRT C2 domain second repeat found in Mult	99.66
cd08681	118	C2_fungal_Inn1p-like C2 domain found in fungal Ing	99.65
cd08678	126	C2_C21orf25-like C2 domain found in the Human chro	99.65
cd08375	136	C2_Intersectin C2 domain present in Intersectin. A	99.65
cd08407	138	C2B_Synaptotagmin-13 C2 domain second repeat prese	99.65
cd04050	105	C2B_Synaptotagmin-like C2 domain second repeat pre	99.65
cd04025	123	C2B_RasA1_RasA4 C2 domain second repeat present in	99.64
cd04031	125	C2A_RIM1alpha C2 domain first repeat contained in	99.64
cd04040	115	C2D_Tricalbin-like C2 domain fourth repeat present	99.64
cd08373	127	C2A_Ferlin C2 domain first repeat in Ferlin. Ferli	99.64
cd08688	110	C2_KIAA0528-like C2 domain found in the Human KIAA	99.64
cd08404	136	C2B_Synaptotagmin-4 C2 domain second repeat presen	99.64
cd04018	151	C2C_Ferlin C2 domain third repeat in Ferlin. Ferli	99.63
cd08680	124	C2_Kibra C2 domain found in Human protein Kibra. K	99.63
cd08385	124	C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe	99.63
cd08382	123	C2_Smurf-like C2 domain present in Smad ubiquitina	99.62
cd08685	119	C2_RGS-like C2 domain of the Regulator Of G-Protei	99.62
KOG1030	168	consensus Predicted Ca2+-dependent phospholipid-bi	99.62
cd04032	127	C2_Perforin C2 domain of Perforin. Perforin contai	99.62
cd08402	136	C2B_Synaptotagmin-1 C2 domain second repeat presen	99.61
cd04030	127	C2C_KIAA1228 C2 domain third repeat present in unc	99.61
cd04011	111	C2B_Ferlin C2 domain second repeat in Ferlin. Ferl	99.61
cd08391	121	C2A_C2C_Synaptotagmin_like C2 domain first and thi	99.61
cd04024	128	C2A_Synaptotagmin-like C2 domain first repeat pres	99.61
cd08387	124	C2A_Synaptotagmin-8 C2A domain first repeat presen	99.6
cd08521	123	C2A_SLP C2 domain first repeat present in Synaptot	99.6
cd08388	128	C2A_Synaptotagmin-4-11 C2A domain first repeat pre	99.6
cd08384	133	C2B_Rabphilin_Doc2 C2 domain second repeat present	99.6
cd04043	126	C2_Munc13_fungal C2 domain in Munc13 (mammalian un	99.6
cd04009	133	C2B_Munc13-like C2 domain second repeat in Munc13	99.6
cd04054	121	C2A_Rasal1_RasA4 C2 domain first repeat present in	99.59
cd08403	134	C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe	99.59
cd08401	121	C2A_RasA2_RasA3 C2 domain first repeat present in	99.59
cd08410	135	C2B_Synaptotagmin-17 C2 domain second repeat prese	99.59
cd04014	132	C2_PKC_epsilon C2 domain in Protein Kinase C (PKC)	99.59
cd04027	127	C2B_Munc13 C2 domain second repeat in Munc13 (mamm	99.58
cd04051	125	C2_SRC2_like C2 domain present in Soybean genes Re	99.58
cd08386	125	C2A_Synaptotagmin-7 C2A domain first repeat presen	99.57
cd04048	120	C2A_Copine C2 domain first repeat in Copine. There	99.57
cd04046	126	C2_Calpain C2 domain present in Calpain proteins.	99.57
cd08405	136	C2B_Synaptotagmin-7 C2 domain second repeat presen	99.57
cd04044	124	C2A_Tricalbin-like C2 domain first repeat present	99.57
cd08389	124	C2A_Synaptotagmin-14_16 C2A domain first repeat pr	99.56
cd04026	131	C2_PKC_alpha_gamma C2 domain in Protein Kinase C (	99.56
cd04020	162	C2B_SLP_1-2-3-4 C2 domain second repeat present in	99.56
cd04017	135	C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl	99.56
cd08390	123	C2A_Synaptotagmin-15-17 C2A domain first repeat pr	99.55
cd04037	124	C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli	99.55
cd08690	155	C2_Freud-1 C2 domain found in 5' repressor element	99.54
cd08409	137	C2B_Synaptotagmin-15 C2 domain second repeat prese	99.54
cd04035	123	C2A_Rabphilin_Doc2 C2 domain first repeat present	99.54
cd08408	138	C2B_Synaptotagmin-14_16 C2 domain second repeat pr	99.53
cd00276	134	C2B_Synaptotagmin C2 domain second repeat present	99.53
cd04038	145	C2_ArfGAP C2 domain present in Arf GTPase Activati	99.53
cd08691	137	C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li	99.5
cd08675	137	C2B_RasGAP C2 domain second repeat of Ras GTPase a	99.5
cd08686	118	C2_ABR C2 domain in the Active BCR (Breakpoint clu	99.5
cd04013	146	C2_SynGAP_like C2 domain present in Ras GTPase act	99.48
cd08394	127	C2A_Munc13 C2 domain first repeat in Munc13 (mamma	99.48
cd04045	120	C2C_Tricalbin-like C2 domain third repeat present	99.48
cd04049	124	C2_putative_Elicitor-responsive_gene C2 domain pre	99.48
PLN03008	868	Phospholipase D delta	99.48
cd08676	153	C2A_Munc13-like C2 domain first repeat in Munc13 (	99.46
cd08383	117	C2A_RasGAP C2 domain (first repeat) of Ras GTPase	99.44
cd04021	125	C2_E3_ubiquitin_ligase C2 domain present in E3 ubi	99.44
cd04052	111	C2B_Tricalbin-like C2 domain second repeat present	99.43
PF00168	85	C2: C2 domain; InterPro: IPR000008 The C2 domain i	99.43
cd04047	110	C2B_Copine C2 domain second repeat in Copine. Ther	99.39
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.36
KOG1028	421	consensus Ca2+-dependent phospholipid-binding prot	99.32
smart00239	101	C2 Protein kinase C conserved region 2 (CalB). Ca2	99.31
cd08374	133	C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli	99.22
PLN03200	2102	cellulose synthase-interactive protein; Provisiona	99.17
PLN02270	808	phospholipase D alpha	99.13
KOG1028	421	consensus Ca2+-dependent phospholipid-binding prot	99.12
KOG1011	1283	consensus Neurotransmitter release regulator, UNC-	99.09
cd00030	102	C2 C2 domain. The C2 domain was first identified i	99.08
COG5038	1227	Ca2+-dependent lipid-binding protein, contains C2	98.88
KOG1328	1103	consensus Synaptic vesicle protein BAIAP3, involve	98.68
PLN02352	758	phospholipase D epsilon	98.67
cd08689	109	C2_fungal_Pkc1p C2 domain found in protein kinase	98.33
COG5038	1227	Ca2+-dependent lipid-binding protein, contains C2	98.33
KOG2059	800	consensus Ras GTPase-activating protein [Signal tr	98.17
KOG1264	1267	consensus Phospholipase C [Lipid transport and met	98.16
KOG1011	1283	consensus Neurotransmitter release regulator, UNC-	98.11
KOG1031	1169	consensus Predicted Ca2+-dependent phospholipid-bi	98.04
KOG2059	800	consensus Ras GTPase-activating protein [Signal tr	97.99
KOG0905	1639	consensus Phosphoinositide 3-kinase [Signal transd	97.96
KOG1013	362	consensus Synaptic vesicle protein rabphilin-3A [I	97.74
cd08398	158	C2_PI3K_class_I_alpha C2 domain present in class I	97.64
cd08693	173	C2_PI3K_class_I_beta_delta C2 domain present in cl	97.63
cd08380	156	C2_PI3K_like C2 domain present in phosphatidylinos	97.57
cd04012	171	C2A_PI3K_class_II C2 domain first repeat present i	97.45
KOG1328	1103	consensus Synaptic vesicle protein BAIAP3, involve	97.44
cd08683	143	C2_C2cd3 C2 domain found in C2 calcium-dependent d	97.41
KOG1326	1105	consensus Membrane-associated protein FER-1 and re	97.32
cd08397	159	C2_PI3K_class_III C2 domain present in class III p	97.29
KOG1013	362	consensus Synaptic vesicle protein rabphilin-3A [I	97.18
PLN02964	644	phosphatidylserine decarboxylase	97.16
cd08399	178	C2_PI3K_class_I_gamma C2 domain present in class I	96.99
cd08684	103	C2A_Tac2-N C2 domain first repeat found in Tac2-N	96.88
PF00792	142	PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I	96.73
cd08589	324	PI-PLCc_SaPLC1_like Catalytic domain of Streptomyc	96.43
KOG3837	523	consensus Uncharacterized conserved protein, conta	95.76
KOG1327	529	consensus Copine [Signal transduction mechanisms]	94.59
KOG2060	405	consensus Rab3 effector RIM1 and related proteins,	94.5
KOG1326	1105	consensus Membrane-associated protein FER-1 and re	92.93
smart00142	100	PI3K_C2 Phosphoinositide 3-kinase, region postulat	92.43
cd08695	189	C2_Dock-B C2 domains found in Dedicator Of CytoKin	92.38
cd08694	196	C2_Dock-A C2 domains found in Dedicator Of CytoKin	91.36
PF10358	143	NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins;	90.75
PF14429	184	DOCK-C2: C2 domain in Dock180 and Zizimin proteins	90.43
KOG1327	529	consensus Copine [Signal transduction mechanisms]	90.03
cd08679	178	C2_DOCK180_related C2 domains found in Dedicator O	89.83
PF15627	156	CEP76-C2: CEP76 C2 domain	89.16
KOG0904	1076	consensus Phosphatidylinositol 3-kinase catalytic	83.36
KOG1329	887	consensus Phospholipase D1 [Lipid transport and me	83.3

>PLN02230 phosphoinositide phospholipase C 4

Probab=100.00  E-value=1.9e-99  Score=769.79  Aligned_cols=372  Identities=63%  Similarity=1.075  Sum_probs=306.4

Q ss_pred             ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCCC
Q 017257            1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA   80 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (374)
                      ||++||||+||+++.+....||||++||||||||+|++++++++....+.+ ... ....++++.|+.+..++.....+.
T Consensus       223 ~~~~~~Gd~L~~~~~~~~~~lpsP~~Lk~kilik~Kk~~~~~e~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~s~~  300 (598)
T PLN02230        223 MITQTFGDMLYYHDSEGCQEFPSPEELKEKILISTKPPKEYLEANDAKEKD-NGE-KGKDSDEDVWGKEPEDLISTQSDL  300 (598)
T ss_pred             HHHHHHhhhhccCCCcccCCCCChHHHcCCEEEEecCCccccccccccccc-ccc-cccccchhhhcccccccccccccc
Confidence            689999999999887778899999999999999999998776543211100 000 011122333443333222111100


Q ss_pred             CCCC--CCCCCCCCC--CCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccc
Q 017257           81 CDKD--DFDGGVDND--EEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDI  156 (374)
Q Consensus        81 ~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~  156 (374)
                      +...  ..+.+...+  .+....+...+++++|++||+|+++++|++|+.+++..+.+++|+||||+++.+++++++.+|
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~  380 (598)
T PLN02230        301 DKVTSSVNDLNQDDEERGSCESDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADV  380 (598)
T ss_pred             ccccccccccccchhccccccccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHH
Confidence            0000  000000000  001111233467999999999999999999999998888778999999999999999999999


Q ss_pred             hhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccC
Q 017257          157 VRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFD  236 (374)
Q Consensus       157 ~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~  236 (374)
                      ++||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+..+.++.|+
T Consensus       381 v~~nk~~L~RIYPkG~RvdSSNynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fd  460 (598)
T PLN02230        381 IRFTQKNFLRIYPKGTRFNSSNYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFY  460 (598)
T ss_pred             HHhhhhhceeeCCCCCcCCCCCCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998765556799


Q ss_pred             CCCCCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc
Q 017257          237 PKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL  316 (374)
Q Consensus       237 p~~~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel  316 (374)
                      |....+++.+|+|+|++||+|++++++.+.+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|.|.+.+|||
T Consensus       461 P~~~~~~~~~L~V~VisGq~~~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPEL  540 (598)
T PLN02230        461 PKDNSCPKKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPEL  540 (598)
T ss_pred             CCcCCCcCcEEEEEEEEccCccCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCce
Confidence            98776677899999999999987766666777889999999999999999999999988888999999999999999999


Q ss_pred             cEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       317 a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |+|||.|+|+|..++++|+||+||||++|++|||||||+|..|+++.+++|||||+|.
T Consensus       541 AllRf~V~d~d~~~~ddfiGQ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~  598 (598)
T PLN02230        541 ALLRVEVHEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV  598 (598)
T ss_pred             eEEEEEEEECCCCCCCCEEEEEEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence            9999999999987889999999999999999999999999999999999999999985

>PLN02222 phosphoinositide phospholipase C 2

Probab=100.00  E-value=3.1e-97  Score=752.63  Aligned_cols=369  Identities=73%  Similarity=1.257  Sum_probs=303.0

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||++||||+||+++. +....||||++||||||||+|++++.++.......+    .....+++..++.++++...+..+
T Consensus       212 ~~~~~~g~~L~~~~~~~~~~~lpsP~~Lk~kilik~K~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  287 (581)
T PLN02222        212 MVTEIFGEILFTPPVGESLKEFPSPNSLKKRIIISTKPPKEYKEGKDDEVVQ----KGKDLGDEEVWGREVPSFIQRNKS  287 (581)
T ss_pred             HHHHHHhhhhcCCCccccccCCCChHHHCCCEEEEecCCccccccccccccc----cccccccccccccccccccccccc
Confidence            689999999999884 457899999999999999999998665442110000    001111222234333433221111


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                      .++.+..+.+ .++++...++.+...+++|++|++|+.+++++++...++..|..++++||||+++.+++++++.+|++|
T Consensus       288 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~  366 (581)
T PLN02222        288 VDKNDSNGDD-DDDDDDGEDKSKKNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRF  366 (581)
T ss_pred             cccccccccc-cccccccccccccccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHH
Confidence            1111100000 011111222334557899999999999999998887776667678999999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCC
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV  239 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~  239 (374)
                      |++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.||+|||||||++||+.......|+|..
T Consensus       367 n~~~L~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~  446 (581)
T PLN02222        367 TQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKA  446 (581)
T ss_pred             hhhhceeeCCCCCcCcCCCCCchhHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999998765445799987


Q ss_pred             CCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEE
Q 017257          240 KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALL  319 (374)
Q Consensus       240 ~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~L  319 (374)
                      ..+++.+|+|+|++||+|+++.++.+.+..+++||||+|+|.|.|.|+.++||+++.+|+||+|||+|+|.+..||+|+|
T Consensus       447 ~~~~~~~L~V~Visgq~~~l~~~~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAll  526 (581)
T PLN02222        447 TLPVKTTLRVTIYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALL  526 (581)
T ss_pred             CCCccceEEEEEEEcccccCCCCccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEE
Confidence            77778899999999999887666666667788999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          320 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       320 rf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      ||.|+|+|..+.++|+||+|+||++|++|||||||+|.+|+++.+++|||||+|+
T Consensus       527 Rf~V~d~D~~~~ddfigq~~lPv~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~  581 (581)
T PLN02222        527 RLEVHEYDMSEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV  581 (581)
T ss_pred             EEEEEECCCCCCCcEEEEEEcchhhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence            9999999987789999999999999999999999999999999999999999985

>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-96  Score=745.44  Aligned_cols=345  Identities=52%  Similarity=0.836  Sum_probs=290.2

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||++|||||||+++. ..++.|||||+||+|||||+||++++++...               .      ++.+..  +.+
T Consensus       397 ~~~~ifGd~Ly~~~~~~~~~~lPSPe~LK~KILik~Kk~~~~~~~~~---------------~------~~~~~~--~~d  453 (746)
T KOG0169|consen  397 MLKEIFGDMLYTPPPDSSLKELPSPEELKNKILIKGKKLKELLEADS---------------K------EPSSFE--VTD  453 (746)
T ss_pred             HHHHHhhhheeccCCCCccccCcCHHHHhcCEEEecCCCCccccccc---------------c------cccccc--ccc
Confidence            689999999999885 4799999999999999999999987764311               0      000000  000


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                      ++++.+...+.+.++.....+....+++|||+||.||.+++|++|..++... +.++++||||+++.+++++.+.+|++|
T Consensus       454 ~~~~~e~s~e~~~~~~~~~~~~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~  532 (746)
T KOG0169|consen  454 EDEDKESSTENDKSETDGQKKSRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRH  532 (746)
T ss_pred             ccccccccccccccccccccchhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHH
Confidence            1111110000000111111222337999999999999999999999998775 578999999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCC
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV  239 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~  239 (374)
                      |+++|+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++||+|||||||.+||+..   ..|+|..
T Consensus       533 t~r~L~RvYP~~~R~dSSNynPq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~---~~F~P~~  609 (746)
T KOG0169|consen  533 TQRNLLRVYPKGLRVDSSNYNPQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSG---STFDPKS  609 (746)
T ss_pred             hHhheeeecCCccccCCCCCChHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCC---CccCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999943   4799966


Q ss_pred             C-CCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEeecCCcc
Q 017257          240 K-LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELA  317 (374)
Q Consensus       240 ~-~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v~~pela  317 (374)
                      . .++..+|+|+|++||+|+.++.++..  ....||||.|+|+|+|.|+.+++|+++++| +||.|+|+|+|++.+||||
T Consensus       610 ~~~~~~~tL~IkI~sGq~~~~~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELA  687 (746)
T KOG0169|consen  610 NLPPVKKTLKIKIISGQGWLPDFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELA  687 (746)
T ss_pred             CCCCCCceeEEEEEecCcccCCCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEecccee
Confidence            6 34455899999999998876554433  356799999999999999999999977765 8999999999999999999


Q ss_pred             EEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          318 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       318 ~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      +|||.|+|+|..++|||+||+|+||++|++|||||||+|..|+.+..++|||||+|.
T Consensus       688 liRF~V~d~d~~~~ddF~GQ~tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~  744 (746)
T KOG0169|consen  688 LIRFEVHDYDYIGKDDFIGQTTLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIV  744 (746)
T ss_pred             EEEEEEEecCCCCcccccceeeccHHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence            999999999999999999999999999999999999999999999999999999984

>PLN02952 phosphoinositide phospholipase C

Probab=100.00  E-value=8e-93  Score=722.54  Aligned_cols=365  Identities=67%  Similarity=1.143  Sum_probs=295.8

Q ss_pred             ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhh---hhccccCCCCCCcccccCCCcCCccccC
Q 017257            1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE---KENDSQRGKGSADEEAWGKEVPNLKSLN   77 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (374)
                      ||++||||+||.|..+....||||++||||||||+|+++++++......   ....+......++++   .+..++....
T Consensus       232 ~~~~~~g~~L~~p~~~~~~~lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  308 (599)
T PLN02952        232 MATQIFGQMLYYPESDSLVQFPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESML  308 (599)
T ss_pred             HHHHHHhhhhcCCCCcccCCCCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---cccccccccc
Confidence            6899999999998766678999999999999999999987765421100   000000000000000   0000000000


Q ss_pred             CCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccch
Q 017257           78 NSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIV  157 (374)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~  157 (374)
                          .+.+.+  ...+++....+.....+++|++|++|+.+++++.+.++....+..++++||||+++.+++++++.+|+
T Consensus       309 ----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v  382 (599)
T PLN02952        309 ----FEQEAD--SRSDSDQDDNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVV  382 (599)
T ss_pred             ----cccccc--ccccccchhhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHH
Confidence                000000  00000111112234567899999999999998888776655455678999999999999999999999


Q ss_pred             hccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCC
Q 017257          158 RFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP  237 (374)
Q Consensus       158 ~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p  237 (374)
                      +||++||+||||+|+|+|||||||+.+|++|||||||||||+|++||||+|||++||+|||||||++||.....+..|+|
T Consensus       383 ~~n~~~l~RiYP~g~R~dSsNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp  462 (599)
T PLN02952        383 RFTQRNILRIYPKGTRITSSNYKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDP  462 (599)
T ss_pred             HHhhhhceeeCCCCCcCcCCCCCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999986544457999


Q ss_pred             CCCCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCcc
Q 017257          238 KVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA  317 (374)
Q Consensus       238 ~~~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela  317 (374)
                      ....+++.+|+|+||+||+|+++......+..+++||||+|+|+|.|.|+.++||+++.||+||+|||+|.|.+.+||+|
T Consensus       463 ~~~~~~~~~L~V~VisGq~l~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELA  542 (599)
T PLN02952        463 KKKLPVKKTLKVKVYLGDGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELA  542 (599)
T ss_pred             CCCCCccceEEEEEEECcccCCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCcc
Confidence            88777788999999999999876544556677889999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          318 LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       318 ~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      +|+|+|+|+|..+.++|+||+|+||++|++|||||||+|.+|++++.++|||||+|+
T Consensus       543 llrf~V~D~D~~~~ddfiGq~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~  599 (599)
T PLN02952        543 LLRIEVREYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV  599 (599)
T ss_pred             EEEEEEEecCCCCCCCeEEEEEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence            999999999988889999999999999999999999999999999999999999985

>PLN02228 Phosphoinositide phospholipase C

Probab=100.00  E-value=4.3e-92  Score=713.29  Aligned_cols=346  Identities=58%  Similarity=1.007  Sum_probs=287.9

Q ss_pred             ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCCC
Q 017257            1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA   80 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (374)
                      ||++||||+||+++.+....||||++||||||||+|++++.++.+.....      ...++++..+..            
T Consensus       215 ~~~~~lg~~L~~~~~~~~~~lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~------~~~~~~~~~~~~------------  276 (567)
T PLN02228        215 MLTKTFRGMLFRCTSESTKHFPSPEELKNKILISTKPPKEYLESKTVQTT------RTPTVKETSWKR------------  276 (567)
T ss_pred             HHHHHHhHhhcCCCCCccCCCCChHHHCCCEEEEecCCcccccccccccc------cccccccccccc------------
Confidence            68999999999988777789999999999999999998754432110000      000000000000            


Q ss_pred             CCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhcc
Q 017257           81 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFT  160 (374)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~  160 (374)
                        ..+     .++......+....++++|++|++|+..++++++.......|...+++||||+++.+++++++.+|++||
T Consensus       277 --~~~-----~~~~~~~~~~~~~~~~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hN  349 (567)
T PLN02228        277 --VAD-----AENKILEEYKDEESEAVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFT  349 (567)
T ss_pred             --ccc-----chhhccccccccchhhhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHh
Confidence              000     0000000001123567999999999998888877766555565668999999999999999999999999


Q ss_pred             ccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCCC
Q 017257          161 QRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK  240 (374)
Q Consensus       161 ~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~~  240 (374)
                      ++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++||+|||||||++||+..   ..|+|...
T Consensus       350 kr~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~  426 (567)
T PLN02228        350 QRNLVRIYPKGTRVDSSNYDPHVGWTHGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKR  426 (567)
T ss_pred             hhhceeeCCCCCcCCCCCCCchhHhcCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999753   36999877


Q ss_pred             CCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCcc-CcEEEEEeecCCccEE
Q 017257          241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALL  319 (374)
Q Consensus       241 ~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~W-ne~f~F~v~~pela~L  319 (374)
                      .+++.+|+|+||+||+|+++++..+.+..+++||||+|+|.|.|.|+.++||+++.|++||+| ||+|+|.+.+||+|+|
T Consensus       427 ~p~~~~L~I~ViSGq~l~lp~~~~~~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~l  506 (567)
T PLN02228        427 LPIKTTLKVKIYTGEGWDLDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALL  506 (567)
T ss_pred             CCcCceEEEEEEECCccCCCCCCCCCCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEE
Confidence            777778999999999997655444455667899999999999999999999999998899999 9999999999999999


Q ss_pred             EEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          320 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       320 rf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      ||.|+|+|..+.++|+||+|+||++|++|||||||+|..|+++.+++|||||+|.
T Consensus       507 Rf~V~D~d~~~~d~figq~~lPv~~Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~  561 (567)
T PLN02228        507 WFKVQDYDNDTQNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSFALD  561 (567)
T ss_pred             EEEEEeCCCCCCCCEEEEEEcchhHhhCCeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence            9999999987789999999999999999999999999999999999999999984

>PLN02223 phosphoinositide phospholipase C

Probab=100.00  E-value=1.1e-87  Score=671.91  Aligned_cols=318  Identities=44%  Similarity=0.832  Sum_probs=261.7

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||++||||+||+++. +..+.||||++||||||||+|++++++++..               ++   + ++         
T Consensus       216 ~l~~i~Gd~L~~~~~~~~~~~lPSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~-~~---------  267 (537)
T PLN02223        216 MIDQTFGDMVYHEDPQHSLEEFPSPAELQNKILISRRPPKELLYAKA---------------DD---G-GV---------  267 (537)
T ss_pred             HHHHHHhhhhcCCCCccccccCCChHHhCCCEEEEcCCCcccccccc---------------cc---c-cc---------
Confidence            689999999999875 5678999999999999999999976543310               00   0 00         


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhh--ccccch
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGT--YGNDIV  157 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~--~~~~~~  157 (374)
                       ..+++      .+..      .....++|++||.++.+++++.             +.+++|.++.++.+.  ++.+++
T Consensus       268 -~~~~~------~~~~------~~~~~~~y~~li~~~~~~~~~~-------------~~~~~~~~~~~~~~~s~~~~~~v  321 (537)
T PLN02223        268 -GVRNE------LEIQ------EGPADKNYQSLVGFHAVEPRGM-------------LQKALTGKADDIQQPGWYERDII  321 (537)
T ss_pred             -ccccc------cccc------ccccccceeeeeeeeccccccc-------------hhhhhccchhhhhhccccchhhh
Confidence             00000      0000      0123467888888776655332             345566666665543  367899


Q ss_pred             hccccceeeeecCCcc-cCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccC
Q 017257          158 RFTQRNLLRIYPKGIR-VDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFD  236 (374)
Q Consensus       158 ~~~~~~l~RvYP~g~R-~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~  236 (374)
                      +||++||+||||+|+| +|||||||+.+|++|||||||||||+|++||||+|||++||+|||||||++||+.+++ ..|+
T Consensus       322 ~ft~~~l~RiYPkG~R~~dSSNYnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~-~~Fd  400 (537)
T PLN02223        322 SFTQKKFLRTRPKKKNLLINAPYKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPS-GVFY  400 (537)
T ss_pred             hhcccceEEECCCCCccccCCCCCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcc-cccC
Confidence            9999999999999999 5999999999999999999999999999999999999999999999999999987544 2799


Q ss_pred             CCCCCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc
Q 017257          237 PKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL  316 (374)
Q Consensus       237 p~~~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel  316 (374)
                      |......+.+|+|+||+|++|+.+.+++. +..+.+||||+|+|.|.|.|+.+++|.+..|++||+|||+|+|.|.+||+
T Consensus       401 P~~~~~~~~~L~V~Visgq~~~~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PEL  479 (537)
T PLN02223        401 PTENPVVVKILKVKIYMGDGWIVDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDL  479 (537)
T ss_pred             CCCCcccceEEEEEEEEcccccCCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCc
Confidence            97655567889999999999975443332 44578999999999999999999999866667999999999999999999


Q ss_pred             cEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       317 a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |+|||+|+|+|..+.++|+||+|+||++|++|||||||+|.+|+++..++|||||+|.
T Consensus       480 AlLrf~V~D~D~~~~ddfiGQ~~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~  537 (537)
T PLN02223        480 ALISFEVYDYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS  537 (537)
T ss_pred             eEEEEEEEecCCCCCCcEEEEEecchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence            9999999999988889999999999999999999999999999999999999999984

>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]

Probab=100.00  E-value=2.9e-73  Score=576.28  Aligned_cols=254  Identities=34%  Similarity=0.496  Sum_probs=230.1

Q ss_pred             ccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCc
Q 017257          102 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNP  181 (374)
Q Consensus       102 ~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P  181 (374)
                      ...+++|+|.||.|.+.++|.+|+-+.+.+. +|+|+||+|+++..++++++-+||.||+++|+||||+|+|||||||.|
T Consensus       560 e~~a~~e~S~lVNyiqpvkf~sfe~a~krN~-~f~msSf~E~~~~~~Lk~~~iefV~yNK~QlSRIYPKgtRvdSSNymP  638 (1189)
T KOG1265|consen  560 ETNAHEEMSSLVNYIQPVKFSSFEIAEKRNR-HFEMSSFDESTGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMP  638 (1189)
T ss_pred             hhhhHHHHHhhhhhcccccccchhhhhhhcc-eeeeeechhHHHHHHHHhCchHHhhhhhHhhhccccCcccccccccch
Confidence            4468899999999999999999999987764 899999999999999999999999999999999999999999999999


Q ss_pred             cccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCCCCCc----ceEEEEEEEecccc
Q 017257          182 LIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA----KKTLKVTVYMGEGW  257 (374)
Q Consensus       182 ~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~~~~~----~~~L~V~Visa~~l  257 (374)
                      +.|||+|||||||||||.|.+||||.|||.-||+|||+|||+|||.++   ..|||....++    ..++.|+|||||-|
T Consensus       639 qifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpD---r~fdPFse~~VdgvIA~t~sV~VISgqFL  715 (1189)
T KOG1265|consen  639 QIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPD---RQFDPFSESPVDGVIAATLSVTVISGQFL  715 (1189)
T ss_pred             HHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCC---cCcCCcccCcccceEEeeEEEEEEeeeec
Confidence            999999999999999999999999999999999999999999999975   46999876543    56899999999987


Q ss_pred             ccCCCCCcccCCCCCCceEEEEEecCCCCce--eeeeeeccCC-CCCccCc-EEEEE-eecCCccEEEEEEEeeCCCCCC
Q 017257          258 YYDFPHTHFDAYSPPDFYARVGIAGVPADTV--MKKTKTLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKD  332 (374)
Q Consensus       258 ~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~--k~kTk~v~~~-~nP~Wne-~f~F~-v~~pela~Lrf~V~D~d~~~~d  332 (374)
                      ..      .    ....||+|.+.|.|.|..  .+||+++.+| +||+|+| .|.|. |..|+||+|||.|+++.    .
T Consensus       716 Sd------r----kvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~eepfvF~KVvLpeLA~lRiavyeEg----g  781 (1189)
T KOG1265|consen  716 SD------R----KVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEEPFVFRKVVLPELASLRIAVYEEG----G  781 (1189)
T ss_pred             cc------c----ccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccCCcccceecccchhheeeeeeccC----C
Confidence            42      1    123599999999999976  4689998876 8999985 69995 77899999999999864    5


Q ss_pred             CccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          333 DFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       333 d~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      .||||-.+||+.|+.|||||-|++..++++..+.|||.|..
T Consensus       782 K~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~  822 (1189)
T KOG1265|consen  782 KFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVL  822 (1189)
T ss_pred             ceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEe
Confidence            79999999999999999999999999999988999999875

>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]

Probab=100.00  E-value=2.2e-68  Score=536.41  Aligned_cols=257  Identities=33%  Similarity=0.494  Sum_probs=229.0

Q ss_pred             ccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCc
Q 017257          102 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNP  181 (374)
Q Consensus       102 ~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P  181 (374)
                      ...|+.|||+||+||+++++.. .+.  .++...+|+||.|+|+.|++...+..|+.||+++|+||||+|.|+|||||||
T Consensus       926 ~krIA~ElSdLVVYcr~vp~~~-~~~--~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P 1002 (1267)
T KOG1264|consen  926 NKRIAIELSDLVVYCRPVPKTK-DNL--ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDP 1002 (1267)
T ss_pred             HHHHHHHhhceEEEEecCCCcc-ccc--ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCC
Confidence            3479999999999999999531 111  2244678999999999999998888999999999999999999999999999


Q ss_pred             cccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCCCC---C-cceEEEEEEEecccc
Q 017257          182 LIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL---P-AKKTLKVTVYMGEGW  257 (374)
Q Consensus       182 ~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~~~---~-~~~~L~V~Visa~~l  257 (374)
                      +++|+||||||||||||.|++||||+|+|+.||+|||||||++||..     .|||..+.   . -+.+|+|+||.|+.|
T Consensus      1003 ~pmWn~GsqmVALN~QTgDKpMQmNqa~F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL 1077 (1267)
T KOG1264|consen 1003 FPMWNCGSQMVALNFQTGDKPMQMNQALFSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHL 1077 (1267)
T ss_pred             cccccccceeEEeeccCCCchhhhhHHHhhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeecccc
Confidence            99999999999999999999999999999999999999999999975     58886431   1 246799999999998


Q ss_pred             ccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccC-cEEEEEeecCCccEEEEEEEeeCCCCCCCcc
Q 017257          258 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFG  335 (374)
Q Consensus       258 ~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wn-e~f~F~v~~pela~Lrf~V~D~d~~~~dd~i  335 (374)
                      +..       ..+..-|||+|+|.|.+.|..+++|++|.+ ++||+|| |+|+|.|.+|++|+|||.|+|.|+++...||
T Consensus      1078 ~k~-------gr~i~cPfVevEiiGa~~Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~Fi 1150 (1267)
T KOG1264|consen 1078 PKL-------GRSIACPFVEVEIIGAEYDTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFL 1150 (1267)
T ss_pred             ccC-------CCCccCCcEEEEEeccccCCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCccee
Confidence            631       124456899999999999999988887655 5899999 9999999999999999999999999988899


Q ss_pred             EEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          336 GQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       336 G~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+|+||.+|+.|||.|||.+.+.+.+..|+|||.|++
T Consensus      1151 aqA~yPv~~ik~GfRsVpLkN~ySEdlELaSLLv~i~m 1188 (1267)
T KOG1264|consen 1151 AQATYPVKAIKSGFRSVPLKNGYSEDLELASLLVFIEM 1188 (1267)
T ss_pred             eeeecchhhhhccceeeecccCchhhhhhhhheeeeEe
Confidence            99999999999999999999999999999999999986

>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1

Probab=100.00  E-value=2.4e-54  Score=397.42  Aligned_cols=148  Identities=33%  Similarity=0.473  Sum_probs=137.5

Q ss_pred             ChHHHhhccccCCC-CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~-~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||++||||+|++++ .+..+.||||++||||||||+|+++                                        
T Consensus       110 ~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k----------------------------------------  149 (258)
T cd08629         110 HLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK----------------------------------------  149 (258)
T ss_pred             HHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------------------------------------
Confidence            68999999999987 4557899999999999999999762                                        


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                                               +++|||+|++|+++++|++|+.+...++..++++||||+++.+++++++.+|++|
T Consensus       150 -------------------------i~~eLs~l~~y~~~~~f~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~  204 (258)
T cd08629         150 -------------------------LVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRH  204 (258)
T ss_pred             -------------------------ccHHHHHHHHHhcCCCCCCccchhhcCCCcceecccCHHHHHHHHHHhHHHHHHh
Confidence                                     3578999999999999999998877455678999999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++|
T Consensus       205 n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N  258 (258)
T cd08629         205 NVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDN  258 (258)
T ss_pred             chhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCChhHHhhhchhcCC
Confidence            999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain

>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3

Probab=100.00  E-value=9.3e-54  Score=394.67  Aligned_cols=147  Identities=33%  Similarity=0.506  Sum_probs=134.6

Q ss_pred             ChHHHhhccccCCCCC--CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257            1 MVTQTLGEILFTPGSE--CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN   78 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~--~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
                      ||++||||+||+++.+  ..+.||||++||||||||+|+++                                       
T Consensus       110 ~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~---------------------------------------  150 (258)
T cd08630         110 HLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ---------------------------------------  150 (258)
T ss_pred             HHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------------------------------------
Confidence            6899999999998754  36899999999999999999762                                       


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257           79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR  158 (374)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~  158 (374)
                                                +++||++||+|+++++|++|+.+..... .++++||+|+++.+++++++.+|++
T Consensus       151 --------------------------i~~els~L~~y~~~~~~~~~~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~~v~  203 (258)
T cd08630         151 --------------------------ISPELSALAVYCQATRLRTLEPAPVQPQ-PCQVSSLSERKAKKLIREAGNSFVR  203 (258)
T ss_pred             --------------------------chHHHHhhHhhcccccCCCcchhhhcCC-CccccccCHHHHHHHHHHhHHHHHH
Confidence                                      4688999999999999999998753222 4589999999999999999999999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++|
T Consensus       204 ~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~N  258 (258)
T cd08630         204 HNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGYEMDLNAGRFLVN  258 (258)
T ss_pred             hhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh

>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4

Probab=100.00  E-value=5.1e-53  Score=389.22  Aligned_cols=147  Identities=31%  Similarity=0.493  Sum_probs=134.7

Q ss_pred             ChHHHhhccccCCCCC--CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257            1 MVTQTLGEILFTPGSE--CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN   78 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~--~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
                      ||++||||+|++++.+  ..+.||||++||||||||+|++                                        
T Consensus       110 ~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~----------------------------------------  149 (258)
T cd08631         110 HLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKI----------------------------------------  149 (258)
T ss_pred             HHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeeccc----------------------------------------
Confidence            6899999999998754  3589999999999999999975                                        


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257           79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR  158 (374)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~  158 (374)
                                               ++++||++|++|+++++|.+|+...... ..++|+||+|+++.+++++++.+|++
T Consensus       150 -------------------------~~~~eLs~L~~y~~~~~f~~~~~~~~~~-~~~~~~SlsE~~~~~l~~~~~~~~v~  203 (258)
T cd08631         150 -------------------------RLSPELSDCVIYCKSVSFRSFTHSREHY-HFYEISSFTETKARKLIREAGNEFVQ  203 (258)
T ss_pred             -------------------------cccHHHHHhHhhhcccccCCcccccccC-ccceecccCHHHHHHHHHhchHHHHH
Confidence                                     1368899999999999999998765432 25789999999999999999999999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++|
T Consensus       204 ~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N  258 (258)
T cd08631         204 HNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAGLEMDLNDGLFRQN  258 (258)
T ss_pred             HHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCChhHHhhcchhcCC
Confidence            9999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which

>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta

Probab=100.00  E-value=8.7e-53  Score=387.50  Aligned_cols=146  Identities=34%  Similarity=0.473  Sum_probs=133.0

Q ss_pred             ChHHHhhccccCCCCCC--CCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257            1 MVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN   78 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~--~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
                      ||+++|||+|++++.+.  .+.||||++||||||||+|+.                                        
T Consensus       110 ~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~k----------------------------------------  149 (257)
T cd08595         110 YLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKK----------------------------------------  149 (257)
T ss_pred             HHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEeccc----------------------------------------
Confidence            68999999999977443  589999999999999999851                                        


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257           79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR  158 (374)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~  158 (374)
                                                +++|||+|++|+++++|++|..+..... .++++||+|+++.+++++++.+|++
T Consensus       150 --------------------------i~~els~L~~y~~~~~~~~~~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~~v~  202 (257)
T cd08595         150 --------------------------IAKALSDLVIYTKSEKFCSFTHSRDNQH-SYENNSIGENKARKLLKSSGADFVG  202 (257)
T ss_pred             --------------------------cChhHHHHhhhcCCcCCCCccccccccc-cceecccCHHHHHHHHHHhHHHHHH
Confidence                                      2468999999999999999887654432 5789999999999999999999999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus       203 ~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~N  257 (257)
T cd08595         203 HTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGAPMDLQNGKFLDN  257 (257)
T ss_pred             HhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCChhhhhhcCcccCC
Confidence            9999999999999999999999999999999999999999999999999999987

This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)

>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein

Probab=100.00  E-value=9.3e-53  Score=389.49  Aligned_cols=150  Identities=31%  Similarity=0.442  Sum_probs=136.1

Q ss_pred             ChHHHhhccccCCC-CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~-~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+||.++ .+....||||++||||||||+|+++.                                       
T Consensus       110 ~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~---------------------------------------  150 (260)
T cd08597         110 YLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR---------------------------------------  150 (260)
T ss_pred             HHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------------------------------------
Confidence            68999999999987 44678999999999999999998730                                       


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                                             .++++||++|++|+++++|.+|+...... ..++++||||+++.+++++++.+|++|
T Consensus       151 -----------------------~~~~~els~l~~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~~~~~~~~~~~v~~  206 (260)
T cd08597         151 -----------------------RKLCKELSDLVSLCKSVRFQDFPTSAQNQ-KYWEVCSFSENLARRLANEFPEDFVNY  206 (260)
T ss_pred             -----------------------ccccHHHHhhhhhhcCcccCCcccccccc-CcccccccCHHHHHHHHHHCHHHHHHH
Confidence                                   14578999999999999999988764332 356899999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus       207 n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~M~lN~g~F~~N  260 (260)
T cd08597         207 NKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPGLMMDLNTGKFLEN  260 (260)
T ss_pred             hhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCChhhhhhcccccCC
Confidence            999999999999999999999999999999999999999999999999999987

This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment

>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2

Probab=100.00  E-value=2.6e-52  Score=385.12  Aligned_cols=144  Identities=28%  Similarity=0.406  Sum_probs=131.9

Q ss_pred             ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||++||||+|++++.+     +...||||++||||||||+|+.                                     
T Consensus       113 ~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~-------------------------------------  155 (261)
T cd08624         113 YCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKY-------------------------------------  155 (261)
T ss_pred             HHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccc-------------------------------------
Confidence            6899999999998743     2479999999999999999963                                     


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257           76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND  155 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~  155 (374)
                                                     +|||+|++|+++++|.+|+.+....+ .++++||+|+|+.+++++.+.+
T Consensus       156 -------------------------------~els~lv~y~~~~kf~~f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~  203 (261)
T cd08624         156 -------------------------------EEMSSLVNYIQPTKFVSFEFSAQKNR-SYVISSFTELKAYDLLSKASVQ  203 (261)
T ss_pred             -------------------------------ccchhhhcccCCcCCCCcccccccCC-cceeecccHHHHHHHHHHhHHH
Confidence                                           24778899999999999998876654 5689999999999999999999


Q ss_pred             chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus       204 fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n  261 (261)
T cd08624         204 FVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLPMQQNMALFEFN  261 (261)
T ss_pred             HHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChhhhhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y

Probab=100.00  E-value=1.9e-52  Score=342.39  Aligned_cols=115  Identities=45%  Similarity=0.730  Sum_probs=109.7

Q ss_pred             hcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCccccccccc
Q 017257          110 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA  189 (374)
Q Consensus       110 s~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~  189 (374)
                      |+||+||++++|++|+++....+ .++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus         1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~   79 (115)
T smart00149        1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC   79 (115)
T ss_pred             CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence            68999999999999999887544 57999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeeccccCCcceeeeeeecccccceeeeecCCCc
Q 017257          190 QMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFL  225 (374)
Q Consensus       190 QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~l  225 (374)
                      |||||||||.|++||||+|||+.||+|||||||++|
T Consensus        80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~l  115 (115)
T smart00149       80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDFL  115 (115)
T ss_pred             eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence            999999999999999999999999999999999986

Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.

>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3

Probab=100.00  E-value=4.1e-53  Score=348.98  Aligned_cols=118  Identities=37%  Similarity=0.644  Sum_probs=94.3

Q ss_pred             hhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCccccccc
Q 017257          108 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH  187 (374)
Q Consensus       108 ~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~  187 (374)
                      |||+||+|+++++|.+|........ .++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++
T Consensus         1 ELSdLvvY~~s~~f~~~~~~~~~~~-~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~   79 (118)
T PF00387_consen    1 ELSDLVVYCRSVKFKSFEDSERKKQ-PWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC   79 (118)
T ss_dssp             HHHTTESSCEEE----HHHHHHHTS-TTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred             ChhhhheeeccccCCCcCChhhcCC-ccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence            7999999999999999888655432 679999999999999999999999999999999999999999999999999999


Q ss_pred             cceeeeeccccCCcceeeeeeecccccceeeeecCCCcc
Q 017257          188 GAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLL  226 (374)
Q Consensus       188 G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr  226 (374)
                      |||||||||||.|++||||+|||++||+|||||||++||
T Consensus        80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~lR  118 (118)
T PF00387_consen   80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEYLR  118 (118)
T ss_dssp             T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred             cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence            999999999999999999999999999999999999997

1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....

>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2

Probab=100.00  E-value=5.8e-52  Score=380.34  Aligned_cols=143  Identities=35%  Similarity=0.476  Sum_probs=129.1

Q ss_pred             ChHHHhhccccCCC--CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257            1 MVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN   78 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~--~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
                      ||+++|||+|++++  .+....||||++||+|||||+|++.                                       
T Consensus       110 ~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~---------------------------------------  150 (254)
T cd08633         110 YLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLS---------------------------------------  150 (254)
T ss_pred             HHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCc---------------------------------------
Confidence            68999999999876  3456899999999999999999752                                       


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257           79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR  158 (374)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~  158 (374)
                                                  ++|++|++|+++++|.+|+....   ..+|++||+|+++.+++++++.+|++
T Consensus       151 ----------------------------~~Ls~l~~y~~~~~~~~~~~~~~---~~~~~~S~sE~k~~~l~~~~~~~~v~  199 (254)
T cd08633         151 ----------------------------RALSDLVKYTKSVRVHDIETEAT---SSWQVSSFSETKAHQILQQKPAQYLR  199 (254)
T ss_pred             ----------------------------hhhhHHhhhcccCCcCccccccc---cceeeecccHHHHHHHHHHCHHHHHH
Confidence                                        34677888888888888876432   35799999999999999999999999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus       200 ~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N  254 (254)
T cd08633         200 FNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSAN  254 (254)
T ss_pred             hhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCchhHhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m

>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta

Probab=100.00  E-value=5.2e-52  Score=383.90  Aligned_cols=147  Identities=34%  Similarity=0.503  Sum_probs=134.8

Q ss_pred             ChHHHhhccccCCC-CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~-~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+|+++| ....+.||||++||+|||||+|++                                         
T Consensus       110 ~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~-----------------------------------------  148 (257)
T cd08593         110 HLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKL-----------------------------------------  148 (257)
T ss_pred             HHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEeccc-----------------------------------------
Confidence            68999999999977 344689999999999999999965                                         


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                                              ++++|||+|++|+++++|++|++.... ...++++||||+++.+++++++.+|++|
T Consensus       149 ------------------------~i~~els~L~~~~~~~k~~~~~~~~~~-~~~~~~~SlsE~k~~~~~~~~~~~lv~~  203 (257)
T cd08593         149 ------------------------KLAKELSDLVIYCKSVHFKSFEHSKEN-YHFYEMSSFSESKALKLAQESGNEFVRH  203 (257)
T ss_pred             ------------------------cccHHHHhhhhhcccccCCChhhhccc-CCCceeecCCHHHHHHHHHHhHHHHHHh
Confidence                                    135789999999999999999887743 3367999999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus       204 n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D~~m~LN~G~F~~N  257 (257)
T cd08593         204 NKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPGEEMDLNDGLFRQN  257 (257)
T ss_pred             hhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCChHHHhhhchhcCC
Confidence            999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is

>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1

Probab=100.00  E-value=1.9e-51  Score=376.17  Aligned_cols=142  Identities=30%  Similarity=0.470  Sum_probs=126.9

Q ss_pred             ChHHHhhccccCCC--CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257            1 MVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN   78 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~--~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
                      ||++||||+|+.++  .+..+.||||++||||||||+|++                                        
T Consensus       110 ~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~----------------------------------------  149 (253)
T cd08632         110 YLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKL----------------------------------------  149 (253)
T ss_pred             HHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCC----------------------------------------
Confidence            68999999999865  345789999999999999999975                                        


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257           79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR  158 (374)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~  158 (374)
                                                 ++||++|++|++++.|.++.+..  .  .++++||||+++.+++++++.+|++
T Consensus       150 ---------------------------~~els~l~~~~~~~~~~~~~~~~--~--~~~~~SlsE~~~~~l~~~~~~~~v~  198 (253)
T cd08632         150 ---------------------------CRDLSDLVVYTNSVAAQDIVDDG--S--TGNVLSFSETRAHQLVQQKAEQFMT  198 (253)
T ss_pred             ---------------------------cHHHHhhhhhccCcccccchhcC--C--cccccccCHHHHHHHHHHhHHHHHH
Confidence                                       23577888888888877765432  2  3589999999999999999999999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus       199 ~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~LN~g~F~~n  253 (253)
T cd08632         199 YNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRMMQLNRAKFMVN  253 (253)
T ss_pred             HhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m

>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon

Probab=100.00  E-value=2.2e-51  Score=377.59  Aligned_cols=140  Identities=36%  Similarity=0.504  Sum_probs=127.7

Q ss_pred             ChHHHhhccccCCCC-----CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGS-----ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-----~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||+++|||+||+++.     .....||||++||||||||+|++                                     
T Consensus       110 ~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~-------------------------------------  152 (254)
T cd08596         110 IFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKA-------------------------------------  152 (254)
T ss_pred             HHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCc-------------------------------------
Confidence            689999999998762     23578999999999999999863                                     


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257           76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND  155 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~  155 (374)
                                                     +|||+|++|+++++|++|..     +..+|++||+|+++.+++++++.+
T Consensus       153 -------------------------------~els~l~~y~~~~k~~~~~~-----~~~~~~~S~sE~~~~~~~~~~~~~  196 (254)
T cd08596         153 -------------------------------PELSDLVIYCQAVKFPGLST-----PKCYHISSLNENAAKRLCRRYPQK  196 (254)
T ss_pred             -------------------------------HHHHHHHHHhcCccCCCCCc-----cccceecccCHHHHHHHHHHCHHH
Confidence                                           45778899999999998873     236799999999999999999999


Q ss_pred             chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||++||+||||+|+|||||||||+.||++|||||||||||+|++||||+|||++|
T Consensus       197 lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N  254 (254)
T cd08596         197 LVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDLPMHLNAAMFEAN  254 (254)
T ss_pred             HHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCChHHHhhhchhcCC
Confidence            9999999999999999999999999999999999999999999999999999999987

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core

>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2

Probab=100.00  E-value=2.1e-51  Score=378.29  Aligned_cols=142  Identities=32%  Similarity=0.524  Sum_probs=127.2

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+|+++|. .....||||++||||||||+|++                                         
T Consensus       110 ~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~-----------------------------------------  148 (254)
T cd08628         110 VFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKL-----------------------------------------  148 (254)
T ss_pred             HHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCc-----------------------------------------
Confidence            689999999998764 45789999999999999999854                                         


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecC--CcccccccCCCceEEeeccHHHHHHHHhhccccch
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKG--GLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIV  157 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~--~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~  157 (374)
                                               +++|||+|++|++++.|.  +|+.     +..++++||+|+|+.+++++++.+|+
T Consensus       149 -------------------------~~~eLs~l~~y~~~~~~~~~~~~~-----~~~~~~~S~sE~k~~~~~~~~~~~~v  198 (254)
T cd08628         149 -------------------------IAIELSDLVVYCKPTSKTKDNLEN-----PDFKEIRSFVETKAPSIIRQKPVQLL  198 (254)
T ss_pred             -------------------------CCHHHHhhHhhhcccccccCCccc-----ccccccccccHHHHHHHHHhHHHHHH
Confidence                                     257899999999887652  3322     23458999999999999999999999


Q ss_pred             hccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          158 RFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       158 ~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      +||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus       199 ~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~n  254 (254)
T cd08628         199 KYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKYMQLNHALFSLN  254 (254)
T ss_pred             HHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChhhhhhhhhccCC
Confidence            99999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw

>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3

Probab=100.00  E-value=5.2e-51  Score=377.95  Aligned_cols=141  Identities=28%  Similarity=0.422  Sum_probs=127.6

Q ss_pred             ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||++||||+|++++.+     ....||||++||+|||||+|++                                     
T Consensus       113 ~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~Kkl-------------------------------------  155 (258)
T cd08625         113 YCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKM-------------------------------------  155 (258)
T ss_pred             HHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeec-------------------------------------
Confidence            5899999999998743     3579999999999999999854                                     


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257           76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND  155 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~  155 (374)
                                                        |+||+|+++++|.+|+++..... .++|+||+|+|+.+++++++.+
T Consensus       156 ----------------------------------SdLvvy~~~vkf~~f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~  200 (258)
T cd08625         156 ----------------------------------STLVNYIEPVKFKSFEAAAKRNK-FFEMSSFVETKAMEQLTKSPME  200 (258)
T ss_pred             ----------------------------------ccccceecccccCCchhhhccCC-cceecCccHHHHHHHHHhCHHH
Confidence                                              24568899999999987665432 6789999999999999999999


Q ss_pred             chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+|||+.|
T Consensus       201 ~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~M~LN~G~F~~n  258 (258)
T cd08625         201 FVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLAMQLNMGVFEYN  258 (258)
T ss_pred             HHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcchhhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1

Probab=100.00  E-value=6.3e-51  Score=375.36  Aligned_cols=141  Identities=29%  Similarity=0.404  Sum_probs=128.0

Q ss_pred             ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||++||||+||+++.+     ....||||++||+|||||+|++                                     
T Consensus       113 ~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkL-------------------------------------  155 (258)
T cd08623         113 YCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKM-------------------------------------  155 (258)
T ss_pred             HHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccch-------------------------------------
Confidence            6899999999998743     3479999999999999999853                                     


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257           76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND  155 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~  155 (374)
                                                        |+|++|+++++|.+|+.+..... .++|+||+|+++.+++++++.+
T Consensus       156 ----------------------------------s~Lv~y~~~v~f~~f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~  200 (258)
T cd08623         156 ----------------------------------SNLVNYIQPVKFESFEASKKRNK-SFEMSSFVETKGLEQLTKSPVE  200 (258)
T ss_pred             ----------------------------------hcccccccCcccCCcccccccCC-CccccCccHHHHHHHHHhCHHH
Confidence                                              35778999999999988765433 5789999999999999999999


Q ss_pred             chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus       201 ~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d~~M~LN~G~F~~~  258 (258)
T cd08623         201 FVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVDLSMQINMGMYEYN  258 (258)
T ss_pred             HHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCCcchhhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999999976

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4

Probab=100.00  E-value=1.2e-50  Score=373.40  Aligned_cols=141  Identities=33%  Similarity=0.465  Sum_probs=126.2

Q ss_pred             ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||+++|||+||+++.+     ....||||++||||||||+|++                                     
T Consensus       112 ~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~L-------------------------------------  154 (257)
T cd08626         112 YCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRL-------------------------------------  154 (257)
T ss_pred             HHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccch-------------------------------------
Confidence            6899999999997743     2479999999999999999852                                     


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257           76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND  155 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~  155 (374)
                                                        ++|++|+++++|++|+.+.+..+ .++++||||+++.+++++++.+
T Consensus       155 ----------------------------------s~L~~y~~~~~~~~~~~~~~~~~-~~~~~S~sE~k~~~~~~~~~~~  199 (257)
T cd08626         155 ----------------------------------SSLVNYAQPVKFQGFDVAEERNI-HFNMSSFNESVGLGYLKTSAIE  199 (257)
T ss_pred             ----------------------------------hhhhcccccCCCCCcCchhhcCC-CccccccCHHHHHHHHHHHHHH
Confidence                                              34566777777888887765544 4689999999999999999999


Q ss_pred             chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||++||+||||+|+|||||||||+.+|++|||||||||||+|++||||+|||+.|
T Consensus       200 ~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~n  257 (257)
T cd08626         200 FVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLGMQLNQGKFEYN  257 (257)
T ss_pred             HHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChhHHhhhccccCC
Confidence            9999999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho

>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta

Probab=100.00  E-value=2.2e-50  Score=371.64  Aligned_cols=141  Identities=34%  Similarity=0.479  Sum_probs=127.2

Q ss_pred             ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||++||||+|++++.+     ..+.||||++||||||||+|+                                      
T Consensus       112 il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~--------------------------------------  153 (257)
T cd08591         112 YCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKK--------------------------------------  153 (257)
T ss_pred             HHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeeccc--------------------------------------
Confidence            6899999999998743     247899999999999999985                                      


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257           76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND  155 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~  155 (374)
                                                       ||+|++|+++++|++|+...+..+ .++++||||+++.+++++++.+
T Consensus       154 ---------------------------------ls~L~~y~~~~~f~~~~~~~~~~~-~~~~~S~sE~~~~~~~~~~~~~  199 (257)
T cd08591         154 ---------------------------------LSSLVNYIQPVKFQGFEVAEKRNK-HYEMSSFNESKGLGYLKKSPIE  199 (257)
T ss_pred             ---------------------------------chhhhccccCCCCCCccchhhcCC-cceecccCHHHHHHHHHHHHHH
Confidence                                             345667778888888887765543 5799999999999999999999


Q ss_pred             chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||++||+||||+|+|+|||||||+++|++|||||||||||+|++||||+|||++|
T Consensus       200 ~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~lN~g~F~~N  257 (257)
T cd08591         200 FVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPDLPMQLNQGKFEYN  257 (257)
T ss_pred             HHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCChhHHhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999999987

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod

>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma

Probab=100.00  E-value=3.4e-46  Score=338.89  Aligned_cols=118  Identities=36%  Similarity=0.615  Sum_probs=108.6

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+||+++. ...+.||||++||||||||+|++                                         
T Consensus       110 il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~-----------------------------------------  148 (229)
T cd08592         110 AFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL-----------------------------------------  148 (229)
T ss_pred             HHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------------------------------------
Confidence            689999999999774 45789999999999999999831                                         


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHH-hhccccchh
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAV-GTYGNDIVR  158 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~-~~~~~~~~~  158 (374)
                                                                            .++++||+|+++.+++ ++++.+|++
T Consensus       149 ------------------------------------------------------~~~~~S~~E~~~~~~~~~~~~~~~v~  174 (229)
T cd08592         149 ------------------------------------------------------FYEMSSFPETKAEKYLNRQKGKIFLK  174 (229)
T ss_pred             ------------------------------------------------------cccccCCcHHHHHHHHHHhhHHHHHH
Confidence                                                                  1357899999999999 478899999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.|
T Consensus       175 ~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~N  229 (229)
T cd08592         175 YNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKPMQLNQALFMLN  229 (229)
T ss_pred             hhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChhHHhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999987

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl

>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta

Probab=100.00  E-value=6.7e-46  Score=335.64  Aligned_cols=116  Identities=42%  Similarity=0.616  Sum_probs=109.0

Q ss_pred             ChHHHhhccccCCC--CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCC
Q 017257            1 MVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNN   78 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~--~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (374)
                      ||++||||+|++++  .+..+.||||++||||||||+|+                                         
T Consensus       110 ~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~-----------------------------------------  148 (227)
T cd08594         110 YLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK-----------------------------------------  148 (227)
T ss_pred             HHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------------------------------------
Confidence            68999999999865  34578999999999999999860                                         


Q ss_pred             CCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257           79 SACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR  158 (374)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~  158 (374)
                                                                              +|++||+|+++.+++++++.+|++
T Consensus       149 --------------------------------------------------------~~~~S~sE~~~~~~~~~~~~~~v~  172 (227)
T cd08594         149 --------------------------------------------------------WQVSSFSETRAHQIVQQKAAQFLR  172 (227)
T ss_pred             --------------------------------------------------------ceeccccHHHHHHHHHHHHHHHHH
Confidence                                                                    378999999999999999999999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus       173 ~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~N  227 (227)
T cd08594         173 FNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGRMLQLNRAKFRAN  227 (227)
T ss_pred             hcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCChhhHhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999987

This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,

>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins

Probab=100.00  E-value=4.2e-45  Score=331.59  Aligned_cols=116  Identities=39%  Similarity=0.619  Sum_probs=109.5

Q ss_pred             ChHHHhhccccCCCCCC-CCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~-~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+||+++.+. ...||||++||||||||+|+                                          
T Consensus       110 ~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------------------------------------  147 (226)
T cd08558         110 ILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------------------------------------  147 (226)
T ss_pred             HHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------------------------------------
Confidence            68999999999988544 48999999999999999871                                          


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                                                                             ++++||+|+++.+++++++.+|++|
T Consensus       148 -------------------------------------------------------~~~~S~sE~~~~~~~~~~~~~l~~~  172 (226)
T cd08558         148 -------------------------------------------------------YHMSSFSETKALKLLKESPEEFVKY  172 (226)
T ss_pred             -------------------------------------------------------ceEeecCHHHHHHHHHHChHHHHHh
Confidence                                                                   4789999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      |++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.|
T Consensus       173 n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~g~F~~n  226 (226)
T cd08558         173 NKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDLPMQLNQGKFEQN  226 (226)
T ss_pred             cccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCChhhhhhcccccCC
Confidence            999999999999999999999999999999999999999999999999999976

This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki

>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C

Probab=100.00  E-value=6e-45  Score=331.60  Aligned_cols=120  Identities=35%  Similarity=0.561  Sum_probs=109.4

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+||+++. +..+.||||++||||||||+|+.     .                                   
T Consensus       110 ~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~-----------------------------------  149 (231)
T cd08598         110 IMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S-----------------------------------  149 (231)
T ss_pred             HHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----------------------------------
Confidence            689999999999884 44689999999999999999851     0                                   


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                                                                        ..  ..+++||+|+++.+++++++.+|++|
T Consensus       150 --------------------------------------------------~~--~~~~~S~sE~~~~~l~~~~~~~lv~~  177 (231)
T cd08598         150 --------------------------------------------------KT--PNHIFSLSERSLLKLLKDKRAALDKH  177 (231)
T ss_pred             --------------------------------------------------CC--CceeeccCHHHHHHHHHHHHHHHHHH
Confidence                                                              00  12689999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeeccc
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRA  212 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~  212 (374)
                      |++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||++
T Consensus       178 n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~  230 (231)
T cd08598         178 NRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYDLGMQLNEAMFAG  230 (231)
T ss_pred             hhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCChhhhhhcccccC
Confidence            99999999999999999999999999999999999999999999999999985

This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro

>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1

Probab=100.00  E-value=7.6e-45  Score=328.72  Aligned_cols=117  Identities=35%  Similarity=0.597  Sum_probs=105.1

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||++||||+||+++. .....||||++||||||||+|+..                                        
T Consensus       110 ~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~----------------------------------------  149 (229)
T cd08627         110 HFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY----------------------------------------  149 (229)
T ss_pred             HHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc----------------------------------------
Confidence            689999999999774 357899999999999999999641                                        


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHh-hccccchh
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG-TYGNDIVR  158 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~-~~~~~~~~  158 (374)
                                                                             .+++||+|+++.+++. ..+.+|++
T Consensus       150 -------------------------------------------------------~~~~S~~E~ka~~~~~~~~~~~fv~  174 (229)
T cd08627         150 -------------------------------------------------------RDMSSFPETKAEKYVNRSKGKKFLQ  174 (229)
T ss_pred             -------------------------------------------------------cccCCcChHHHHHHHHhhhHHHHHH
Confidence                                                                   0146889999999885 45689999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeeccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRA  212 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~  212 (374)
                      ||++||+||||+|+|+|||||||+.||++|||||||||||+|++||||+|||+.
T Consensus       175 ~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~M~LN~G~F~~  228 (229)
T cd08627         175 YNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKPMQMNQALFML  228 (229)
T ss_pred             hcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcchhhhcCcccC
Confidence            999999999999999999999999999999999999999999999999999984

This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw

>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C

Probab=100.00  E-value=7.8e-45  Score=330.65  Aligned_cols=117  Identities=58%  Similarity=0.992  Sum_probs=108.5

Q ss_pred             ChHHHhhccccCCCCCC-CCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~-~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+||.|+.+. ...||||++||||||||+|++                                         
T Consensus       110 ~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~-----------------------------------------  148 (228)
T cd08599         110 ILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP-----------------------------------------  148 (228)
T ss_pred             HHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------------------------------------
Confidence            68999999999987544 489999999999999998720                                         


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHh-hccccchh
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG-TYGNDIVR  158 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~-~~~~~~~~  158 (374)
                                                                             ++++||+|+++.++++ +++.+|++
T Consensus       149 -------------------------------------------------------~~~~S~sE~~~~~l~~~~~~~~~v~  173 (228)
T cd08599         149 -------------------------------------------------------VIRNSLSETQLKKVIEGEHPTDLIE  173 (228)
T ss_pred             -------------------------------------------------------ccccCccHHHHHHHhhhhcHHHHHH
Confidence                                                                   3678999999999996 88899999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccc
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      ||++||+||||+|+|+|||||||+++|++|||||||||||+|++||||+|||+.|
T Consensus       174 ~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~~m~LN~G~F~~N  228 (228)
T cd08599         174 FTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYDRPLWLNRGKFRAN  228 (228)
T ss_pred             HhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCChhhhhhcccccCC
Confidence            9999999999999999999999999999999999999999999999999999987

This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi

>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C

Probab=99.95  E-value=1.5e-28  Score=233.19  Aligned_cols=143  Identities=20%  Similarity=0.278  Sum_probs=110.4

Q ss_pred             ChHHHhhccccCCCCCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCCC
Q 017257            1 MVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSA   80 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (374)
                      +|+++||++|++|+......+|||++|||||||++|+.....                   ..   +.            
T Consensus       116 ~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~-------------------~~---~~------------  161 (274)
T cd00137         116 YCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSG-------------------PT---GS------------  161 (274)
T ss_pred             HHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCC-------------------Cc---cc------------
Confidence            378999999999876667889999999999999999863100                   00   00            


Q ss_pred             CCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHH----HHhhccccc
Q 017257           81 CDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDI  156 (374)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~----~~~~~~~~~  156 (374)
                        +                                 ....+.+|.......+ .++++|++|.++..    +..+...++
T Consensus       162 --~---------------------------------~~~~~~~~~~~~~~~~-~~~~~sqdE~k~~~~~K~~~i~~~~~~  205 (274)
T cd00137         162 --S---------------------------------NDTGFVSFEFSTQKNR-SYNISSQDEYKAYDDEKVKLIKATVQF  205 (274)
T ss_pred             --c---------------------------------cccCcCCcccccccCC-CceEEeechhhhcchhhHHHHHhHHHH
Confidence              0                                 0001222222222222 45789999999954    344456678


Q ss_pred             hhccccceeeeecCCcc---------cCCCCCCccccccc---cceeeeeccccCCcceeeeeeecccc
Q 017257          157 VRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH---GAQMVAFNMQGHGRSLWLMHGMFRAN  213 (374)
Q Consensus       157 ~~~~~~~l~RvYP~g~R---------~~SSN~~P~~~W~~---G~QmvAlN~Qt~d~~m~ln~~~F~~n  213 (374)
                      +.||+++|+|+||+|+|         ++||||+|+.+|++   |||||||||||.|++|+||+|+|+.|
T Consensus       206 ~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~g~qiValdfqt~~~~~~ln~~~f~~N  274 (274)
T cd00137         206 VDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPAGCGIVILDFQTMDLPMQQYMAVIEFN  274 (274)
T ss_pred             HhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccCCceEEEeeCcCCCccHHHHhhhhccC
Confidence            89999999999999999         99999999999999   99999999999999999999999976

This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a

>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC)

Probab=99.86  E-value=5.5e-21  Score=160.68  Aligned_cols=125  Identities=43%  Similarity=0.657  Sum_probs=109.0

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC-CceeeeeeeccCCC-CCccCcEEEEEeecCCccEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~-d~~k~kTk~v~~~~-nP~Wne~f~F~v~~pela~Lrf~  322 (374)
                      ..|+|+|++|++|+..    .....+..||||+|++.+.+. +..+.||+++.++. ||.|||+|.|.+..++.++|+|.
T Consensus         2 ~~l~v~vi~a~~L~~~----~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~   77 (128)
T cd00275           2 LTLTIKIISGQQLPKP----KGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV   77 (128)
T ss_pred             eEEEEEEEeeecCCCC----CCCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence            5799999999999642    111245679999999988665 56778999988875 99999999999998888899999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |||++.. ++++||++++++++|..||++++|++..|.+...++|+|+++++
T Consensus        78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~  128 (128)
T cd00275          78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT  128 (128)
T ss_pred             EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence            9999877 79999999999999999999999999999988889999999985

PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking

>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins

Probab=99.81  E-value=3.7e-19  Score=148.56  Aligned_cols=103  Identities=26%  Similarity=0.379  Sum_probs=84.1

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCC--CCceeeeeeeccCCCCCccCcEEEEEeec---CCccEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR  320 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~--~d~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lr  320 (374)
                      +|+|+|++|++|+..      + .+.+||||+|++.|..  ....++||+++.+++||+|||+|.|.+..   ++.+.|+
T Consensus         1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~   73 (120)
T cd08395           1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH   73 (120)
T ss_pred             CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence            489999999999631      2 2678999999998733  22345689999999999999999999974   3457899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc---eEEEcc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH  355 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~  355 (374)
                      |.|+|+|..+++++||++++|++++..+-   .|.||.
T Consensus        74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~  111 (120)
T cd08395          74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG  111 (120)
T ss_pred             EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence            99999998778999999999999998764   466773

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi

>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)

Probab=99.76  E-value=1.2e-17  Score=139.04  Aligned_cols=113  Identities=29%  Similarity=0.410  Sum_probs=91.9

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|+|++|++|+.      .+..+.+||||+|.+.+.+  ..++||++++++.||+|||+|.|.+..+....|+|+|||+
T Consensus         2 L~V~vi~a~~L~~------~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~   73 (119)
T cd04036           2 LTVRVLRATNITK------GDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE   73 (119)
T ss_pred             eEEEEEEeeCCCc------cCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence            7899999999863      1334678999999986532  3567999999999999999999998766667899999999


Q ss_pred             CCCCCCCccEEEEEECccccCcce---EEEccCCCCCccCCeEEEEEEEE
Q 017257          327 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.. ++++||++.++++.|..|.+   +++|.+.     ..+.|.++|++
T Consensus        74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~  117 (119)
T cd04036          74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL  117 (119)
T ss_pred             CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence            987 79999999999999999875   5566442     24567777765

A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o

>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I

Probab=99.75  E-value=1.6e-17  Score=139.76  Aligned_cols=115  Identities=23%  Similarity=0.356  Sum_probs=93.6

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-----CCccEEEE
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI  321 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-----pela~Lrf  321 (374)
                      ++|+|++|++|+.      .+..+.+||||+|.+.+     .++||++++++.||+|||+|.|.+..     +....|.|
T Consensus         1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~   69 (126)
T cd08682           1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL   69 (126)
T ss_pred             CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence            4799999999963      23456789999999853     56799999999999999999999876     34578999


Q ss_pred             EEEeeCCCCCCCccEEEEEECcccc--Cc---ceEEEccCCCCCcc-CCeEEEEEEE
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE  372 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~--~G---yR~vpL~d~~g~~~-~~~~L~v~i~  372 (374)
                      .|||++..+++++||++.++++.+.  .|   .+|.+|.+..++.- ..+.|.|.|+
T Consensus        70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~  126 (126)
T cd08682          70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ  126 (126)
T ss_pred             EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence            9999998888999999999999987  45   47889987766433 3467887764

Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member

>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

Probab=99.74  E-value=4.4e-17  Score=136.13  Aligned_cols=116  Identities=24%  Similarity=0.372  Sum_probs=95.9

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|+|+|++|++|+.      .+..+.+||||+|.+.+    ...+||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus         1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D   69 (121)
T cd04042           1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD   69 (121)
T ss_pred             CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence            37899999999863      23456789999999864    34679999999999999999999987654 679999999


Q ss_pred             eCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257          326 YDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       326 ~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ++..+++++||++.+++.++..|.   .+++|.+..+.. ..++|.+.+.|
T Consensus        70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~  119 (121)
T cd04042          70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTL  119 (121)
T ss_pred             CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEE
Confidence            998888999999999999998553   588999887744 35588888876

MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein

>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip)

Probab=99.73  E-value=8.5e-17  Score=134.56  Aligned_cols=115  Identities=18%  Similarity=0.244  Sum_probs=93.2

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCCccEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      .+|.|+|++|++++.      .+ .+.+||||+|.+.+     .+.||+++.+ +.||+|||+|.|.+... ...|.|+|
T Consensus         2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V   68 (121)
T cd04016           2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI   68 (121)
T ss_pred             cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence            469999999997632      23 46789999999954     5679999877 58999999999998654 35699999


Q ss_pred             EeeCCCCCCCccEEEEEECc-cccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257          324 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~-~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+|..++|++||.+.+||. .+..|.   .|.+|...+|.+.. +.|.+.+.|
T Consensus        69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y  121 (121)
T cd04016          69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY  121 (121)
T ss_pred             EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence            99999998999999999996 687774   58899888887654 467776654

Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian

>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks)

Probab=99.73  E-value=3e-17  Score=137.66  Aligned_cols=97  Identities=27%  Similarity=0.390  Sum_probs=82.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEe-ec--CCccEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v-~~--pela~Lrf  321 (374)
                      ..|.|+|+.|++|+.      .+ .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ ..  .....|+|
T Consensus        13 ~~L~V~Vi~A~~L~~------~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~   85 (122)
T cd08381          13 GTLFVMVMHAKNLPL------LD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV   85 (122)
T ss_pred             CEEEEEEEEeeCCCC------CC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence            569999999999964      13 4578999999998766566788999999999999999999987 32  23468999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      .|||+|..+++++||++.+||+++..+
T Consensus        86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~  112 (122)
T cd08381          86 SVWSHDSLVENEFLGGVCIPLKKLDLS  112 (122)
T ss_pred             EEEeCCCCcCCcEEEEEEEeccccccC
Confidence            999999888899999999999999765

There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut

>cd08677 C2A_Synaptotagmin-13 C2 domain

Probab=99.72  E-value=2.2e-17  Score=136.69  Aligned_cols=98  Identities=18%  Similarity=0.204  Sum_probs=81.5

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|+|+|+.|++++.         .+.+||||+|.+... ....+++|++++++.||+|||+|.|.|...++  ..|.|
T Consensus        13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~   82 (118)
T cd08677          13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL   82 (118)
T ss_pred             CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence            4679999999999851         134799999999642 22357799999999999999999999876665  57999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccc--cCcceE
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSEL--KQGIRA  351 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L--~~GyR~  351 (374)
                      +|||+|.++++++||++.+|++.+  ..|.+|
T Consensus        83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~  114 (118)
T cd08677          83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQ  114 (118)
T ss_pred             EEEeCCCCCCCceEEEEEEccccccCCccccc
Confidence            999999999999999999999975  566664

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain

>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=99.71  E-value=1.3e-16  Score=138.57  Aligned_cols=117  Identities=21%  Similarity=0.338  Sum_probs=95.6

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      .|+|+|++|++|+.      .+..+.+||||+|.+.+     .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+
T Consensus         1 ~L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~   69 (150)
T cd04019           1 YLRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE   69 (150)
T ss_pred             CEEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence            37899999999863      24456789999999964     5789999877 599999999999987665678999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc-------ceEEEccCCCC-----Cc-cCCeEEEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----ER-YKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G-------yR~vpL~d~~g-----~~-~~~~~L~v~i~f  373 (374)
                      |++..+++++||++.+||+.+..|       -+|.||.+..|     ++ ...+.|.|+|.|
T Consensus        70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~  131 (150)
T cd04019          70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL  131 (150)
T ss_pred             EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence            999877899999999999998654       57899998765     22 345678888876

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates

>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD)

Probab=99.71  E-value=2e-16  Score=138.53  Aligned_cols=124  Identities=26%  Similarity=0.388  Sum_probs=100.0

Q ss_pred             eEEEEEEEeccccccCCCC-----------------C-------cccCCCCCCceEEEEEecCCCCceeeeeeeccCCCC
Q 017257          245 KTLKVTVYMGEGWYYDFPH-----------------T-------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI  300 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~-----------------~-------~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~n  300 (374)
                      ++|.|+|+.|++|+.....                 .       .....+.+||||+|.+.+.    ...||++++++.|
T Consensus         7 G~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~~----~~~rT~v~~~~~n   82 (158)
T cd04015           7 GTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAGA----RVARTRVIENSEN   82 (158)
T ss_pred             eeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECCe----EeeEEEEeCCCCC
Confidence            5789999999999742100                 0       0023456899999999652    3469999999999


Q ss_pred             CccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccC-CeEEEEEEEEC
Q 017257          301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI  374 (374)
Q Consensus       301 P~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~-~~~L~v~i~f~  374 (374)
                      |+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++++..|.   +|++|.+..|++.. ++.|.|+++|+
T Consensus        83 P~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~  158 (158)
T cd04015          83 PVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT  158 (158)
T ss_pred             CccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence            99999999988654 367999999999775 689999999999998876   68999999899876 58999999996

PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic

>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=99.71  E-value=1.4e-16  Score=134.23  Aligned_cols=114  Identities=24%  Similarity=0.310  Sum_probs=90.0

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|.|+|++|++++.-   ...+..+.+||||.|.+.+     .+.||++++++.||+|||+|.|.+..++ ..|.|+|||
T Consensus         1 ~L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d   71 (126)
T cd08379           1 ILEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD   71 (126)
T ss_pred             CeEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence            388999999994211   1134457889999999743     5779999999999999999999997655 589999999


Q ss_pred             eCCCC------CCCccEEEEEECccccCcce---EEEccCCCCCcc-CCeEEE
Q 017257          326 YDMSE------KDDFGGQTCLPVSELKQGIR---AVPLHDRKGERY-KSVKLL  368 (374)
Q Consensus       326 ~d~~~------~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~-~~~~L~  368 (374)
                      ++..+      ++++||++.+||+.+..|.+   ++||.+.++... ..+.|-
T Consensus        72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~  124 (126)
T cd08379          72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE  124 (126)
T ss_pred             CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence            98763      79999999999999998864   789987664443 444553

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate

>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=99.70  E-value=1.6e-16  Score=133.90  Aligned_cols=117  Identities=21%  Similarity=0.263  Sum_probs=91.7

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE  322 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf~  322 (374)
                      +|+|+|++|++|+.      .+..+.+||||+|.+.+     .++||++++++.||+|||+|.|.+..++   ...|+|.
T Consensus         1 ~L~V~vi~A~~L~~------~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~   69 (127)
T cd04022           1 KLVVEVVDAQDLMP------KDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY   69 (127)
T ss_pred             CeEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence            48999999999863      13345689999999865     4679999999999999999999987543   2579999


Q ss_pred             EEeeCCCC-CCCccEEEEEECcccc-Cc---ceEEEccCCCCCccCCeEEEEEEEE
Q 017257          323 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       323 V~D~d~~~-~dd~iG~~~ipl~~L~-~G---yR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |||++..+ +++|||++.++++.+. .|   ..|.+|..........+.|.+.+.|
T Consensus        70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~  125 (127)
T cd04022          70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYI  125 (127)
T ss_pred             EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEE
Confidence            99998765 7999999999999987 45   4677887543222245678888776

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates

>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5

Probab=99.70  E-value=1.2e-16  Score=134.47  Aligned_cols=106  Identities=21%  Similarity=0.332  Sum_probs=85.1

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+..   .  ...+.+||||+|.+........++||++++++.||+|||+|.|.+...++  ..|.|
T Consensus        14 ~~~L~V~Vi~a~~L~~~---~--~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~   88 (125)
T cd04029          14 TQSLNVHVKECRNLAYG---D--EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL   88 (125)
T ss_pred             CCeEEEEEEEecCCCcc---C--CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence            35699999999998642   1  12356899999999654333456799999999999999999999876544  47999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccC---cceEEEc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQ---GIRAVPL  354 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~---GyR~vpL  354 (374)
                      .|||+|..+++++||++.++|.++..   .-+|+||
T Consensus        89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l  124 (125)
T cd04029          89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPL  124 (125)
T ss_pred             EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEEC
Confidence            99999988889999999999999864   3467777

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2

>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12

Probab=99.70  E-value=4.9e-17  Score=138.87  Aligned_cols=110  Identities=19%  Similarity=0.180  Sum_probs=88.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|+.|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++  ..|+|+
T Consensus        15 ~~L~V~Vi~A~nL~~------~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~~   88 (136)
T cd08406          15 ERLTVVVVKARNLVW------DNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRVT   88 (136)
T ss_pred             CEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEEE
Confidence            569999999999963      233467899999999865544457799999999999999999999865444  679999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcceEE-EccCCCCC
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGE  360 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~v-pL~d~~g~  360 (374)
                      |||+|..+++++||++.|+..+..+|++|. .+++.-+.
T Consensus        89 V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~  127 (136)
T cd08406          89 VAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRK  127 (136)
T ss_pred             EEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCC
Confidence            999998889999999999998887887763 34443343

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl

>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3)

Probab=99.69  E-value=1.8e-16  Score=137.16  Aligned_cols=108  Identities=24%  Similarity=0.279  Sum_probs=88.0

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-----------C
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P  314 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-----------p  314 (374)
                      +|.|+|+.|++|+.        ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..           |
T Consensus         1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~   72 (148)
T cd04010           1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP   72 (148)
T ss_pred             CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence            38999999999853        2356899999999876555567899999999999999999999851           1


Q ss_pred             ----CccEEEEEEEeeCCCCCCCccEEEEEECccccCc----ceEEEccCCCCCc
Q 017257          315 ----ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER  361 (374)
Q Consensus       315 ----ela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G----yR~vpL~d~~g~~  361 (374)
                          +...|.|.|||++..++++|||++.||+..+..+    -.|.+|.+.....
T Consensus        73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~  127 (148)
T cd04010          73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS  127 (148)
T ss_pred             cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence                2357999999999877899999999999999876    2578887655444

RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain

>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

Probab=99.69  E-value=5.7e-16  Score=128.60  Aligned_cols=117  Identities=24%  Similarity=0.382  Sum_probs=96.8

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|+|+|++|++|+.      .+..+..||||+|.+.+     ...+|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus         2 ~l~v~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~d   69 (119)
T cd08377           2 FLQVKVIRASGLAA------ADIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVYD   69 (119)
T ss_pred             EEEEEEEeeeCCCC------CCCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEEE
Confidence            58999999999863      23345689999999864     357999999999999999999997542 3679999999


Q ss_pred             eCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          326 YDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       326 ~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      ++..+++++||++.+++..+..|. ++.+|.+..+.....++|.+.++|.
T Consensus        70 ~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~  119 (119)
T cd08377          70 EDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI  119 (119)
T ss_pred             CCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence            998778999999999999998775 5779988776655677899998873

MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran

>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD)

Probab=99.69  E-value=2.2e-16  Score=129.60  Aligned_cols=97  Identities=14%  Similarity=0.059  Sum_probs=79.1

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVH  324 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V~  324 (374)
                      .|.|+|++|++|+...  ........+||||+|.+.+     .++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus         2 ~l~v~v~~A~~L~~~~--~~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~   74 (108)
T cd04039           2 VVFMEIKSITDLPPLK--NMTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL   74 (108)
T ss_pred             EEEEEEEeeeCCCCcc--ccCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence            5899999999996421  1011123479999999842     46799999999999999999999876554 47999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCcc
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      |+|..+++++||++.++|++|..||
T Consensus        75 D~d~~~~dd~IG~~~l~L~~l~~~~   99 (108)
T cd04039          75 DKDKFSFNDYVATGSLSVQELLNAA   99 (108)
T ss_pred             ECCCCCCCcceEEEEEEHHHHHhhC
Confidence            9998888999999999999998876

PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM

>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42)

Probab=99.69  E-value=4.8e-16  Score=131.74  Aligned_cols=122  Identities=25%  Similarity=0.366  Sum_probs=94.5

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCC-C-CceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-A-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~-~-d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      .|+|+|++|++|+.      .+..+.+||||+|.+.+.. . ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus         1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v   73 (133)
T cd04033           1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV   73 (133)
T ss_pred             CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence            38999999999863      2345678999999998642 1 12356899999999999999999998543 45789999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcc---------eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy---------R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      ||++..+++++||++.++++++..+-         ++.+|....+..-..+.|.+.+.|.
T Consensus        74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~  133 (133)
T cd04033          74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL  133 (133)
T ss_pred             EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence            99998888999999999999986432         5668875433333466899998874

Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins

Probab=99.68  E-value=5.8e-16  Score=133.52  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=86.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|.|+|+.|++|+..     .+..+.+||||+|++........++||++++++.||+|||+|.|.+. ..-..|.|+||
T Consensus        29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~  102 (146)
T cd04028          29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW  102 (146)
T ss_pred             CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence            4699999999998531     12235689999999986444445789999999999999999999997 45568999999


Q ss_pred             -eeCCCCCCCccEEEEEECccccCcc---eEEEccCC
Q 017257          325 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR  357 (374)
Q Consensus       325 -D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~  357 (374)
                       |++...+++|||++.|+|+.+..+.   .|.+|.+.
T Consensus       103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~  139 (146)
T cd04028         103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPT  139 (146)
T ss_pred             eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCc
Confidence             5777778999999999999996553   46677754

RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as

>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3

Probab=99.68  E-value=3.1e-16  Score=132.56  Aligned_cols=97  Identities=18%  Similarity=0.260  Sum_probs=81.3

Q ss_pred             eEEEEEEEeccccccCCCCCcccC-CCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~-~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ..|.|+|+.|++|+..      +. .+.+||||+|.+........++||++++++.||+|||+|.|.+...++  ..|.|
T Consensus        15 ~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v   88 (128)
T cd08392          15 SCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV   88 (128)
T ss_pred             CEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence            5799999999998631      22 256899999999765555567899999999999999999999865544  58999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~  347 (374)
                      .|||++..+++++||++.|||+.+.-
T Consensus        89 ~V~~~~~~~~~~~lG~~~i~L~~~~~  114 (128)
T cd08392          89 SVWHSRTLKRRVFLGEVLIPLADWDF  114 (128)
T ss_pred             EEEeCCCCcCcceEEEEEEEcCCccc
Confidence            99999988889999999999998854

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids

>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2

Probab=99.68  E-value=1.7e-16  Score=133.54  Aligned_cols=98  Identities=18%  Similarity=0.248  Sum_probs=81.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccCC-CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~-s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ..|.|+|+.|++|+..      +.. +.+||||+|.+........++||++++++.||+|||+|.|.+...++  ..|+|
T Consensus        15 ~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~   88 (125)
T cd08393          15 RELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL   88 (125)
T ss_pred             CEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence            5699999999999641      222 56899999999765544557899999999999999999999865443  48999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      .|||+|..+++++||++.+||..+..+
T Consensus        89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~  115 (125)
T cd08393          89 SVWHRDSLGRNSFLGEVEVDLGSWDWS  115 (125)
T ss_pred             EEEeCCCCCCCcEeEEEEEecCccccC
Confidence            999999888899999999999998654

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety

>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset

Probab=99.68  E-value=6e-16  Score=129.55  Aligned_cols=110  Identities=29%  Similarity=0.413  Sum_probs=92.4

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |.|+|++|++|+..          .+||||+|.+.+     .+.||++++++.||+|||+|.|.+..+....|.|+|||+
T Consensus         2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~   66 (121)
T cd08378           2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK   66 (121)
T ss_pred             EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence            78999999998531          479999999853     467999999999999999999998766667899999999


Q ss_pred             CCCCCCCccEEEEEECccccC--------cceEEEccCCCCCccCCeEEEEEEEE
Q 017257          327 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~--------GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      +.. ++++||++.++++.+..        ..+|.+|.+..+... .+.|.+.|+|
T Consensus        67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~~-~G~i~l~~~~  119 (121)
T cd08378          67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGRV-GGELMLAVWF  119 (121)
T ss_pred             CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCcc-ceEEEEEEEe
Confidence            876 68999999999999864        248999998877444 4588888887

MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate

>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1)

Probab=99.68  E-value=1.2e-15  Score=128.68  Aligned_cols=116  Identities=19%  Similarity=0.273  Sum_probs=92.3

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|+|+|++|++|+.    .     +.+||||+|.+.+    ....||++ .++.||.|||+|.|.+..+++..+.|.|+
T Consensus         4 ~~L~V~Vi~A~~L~~----~-----~~~DPYv~v~l~~----~~~~kT~v-~~~~nP~WnE~f~f~~~~~~~~~l~v~v~   69 (126)
T cd08400           4 RSLQLNVLEAHKLPV----K-----HVPHPYCVISLNE----VKVARTKV-REGPNPVWSEEFVFDDLPPDVNSFTISLS   69 (126)
T ss_pred             eEEEEEEEEeeCCCC----C-----CCCCeeEEEEECC----EeEEEeec-CCCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence            469999999999963    1     2469999999964    23468886 45789999999999876666667889999


Q ss_pred             eeCCCCCCCccEEEEEECccccCcc---eEEEccCCCC-CccCCeEEEEEEEEC
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEFI  374 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g-~~~~~~~L~v~i~f~  374 (374)
                      |++..+++++||++.+||..+..|.   .|.+|....+ ..-..+.|.+++.|.
T Consensus        70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~~  123 (126)
T cd08400          70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARYS  123 (126)
T ss_pred             ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEEE
Confidence            9998888999999999999999886   4778876543 122456899988874

RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki

>cd04041 C2A_fungal C2 domain first repeat; fungal group

Probab=99.67  E-value=2.7e-16  Score=129.45  Aligned_cols=102  Identities=19%  Similarity=0.176  Sum_probs=84.8

Q ss_pred             EEEEEEEeccccccCCCCCcccCC-CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI  321 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~-s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf  321 (374)
                      .|+|+|++|++|+..      +.. +.+||||+|.+.+..  ....+|++++++.||+|||+|.|.+..++   ...|.|
T Consensus         2 ~L~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~   73 (111)
T cd04041           2 VLVVTIHRATDLPKA------DFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLSC   73 (111)
T ss_pred             EEEEEEEEeeCCCcc------cCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEEE
Confidence            689999999999641      333 568999999986532  34579999999999999999999887653   368999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcceEEEcc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH  355 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~  355 (374)
                      +|||+|..+++++||++.++++.|.+--+|.|++
T Consensus        74 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~  107 (111)
T cd04041          74 RLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR  107 (111)
T ss_pred             EEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence            9999998888999999999999998766777764

C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan

>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus)

Probab=99.67  E-value=2.7e-16  Score=133.27  Aligned_cols=103  Identities=15%  Similarity=0.260  Sum_probs=83.3

Q ss_pred             cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCC-CCccCcEEEEEeecCCcc-EEE
Q 017257          243 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELA-LLR  320 (374)
Q Consensus       243 ~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~-nP~Wne~f~F~v~~pela-~Lr  320 (374)
                      ...+|+|+|+.|++|+..      .....+||||+|++.+.+.+..++||++++++. ||+|||+|.|+|..++.. .|.
T Consensus        12 ~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l~   85 (135)
T cd08692          12 VNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQFL   85 (135)
T ss_pred             cCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEEE
Confidence            346799999999999641      123456999999999888888889999999995 799999999999866553 577


Q ss_pred             EEEEeeCCCCCCCccEEEEEECcccc-CcceE
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELK-QGIRA  351 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~-~GyR~  351 (374)
                      +.|||++..+++++||++.++.++.. .|.+|
T Consensus        86 v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~h  117 (135)
T cd08692          86 IKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQ  117 (135)
T ss_pred             EEEEeCCCCcCCceEEEEEECCccCCchhhhh
Confidence            88888887788999999999998743 34444

Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho

>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP)

Probab=99.66  E-value=1.6e-15  Score=125.46  Aligned_cols=110  Identities=24%  Similarity=0.350  Sum_probs=89.9

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|+|++|++|+..      +..+.+||||++.+.+     .+.||++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus         2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~   70 (116)
T cd08376           2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK   70 (116)
T ss_pred             EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence            78999999999641      2345689999999853     568999999999999999999998776567899999999


Q ss_pred             CCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257          327 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      +..+++++||++.++++++..+-   .+++|.+.      .+.|++.+.+
T Consensus        71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~  114 (116)
T cd08376          71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL  114 (116)
T ss_pred             CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence            98888999999999999987654   35677654      2567777765

MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei

>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins

Probab=99.65  E-value=8.8e-16  Score=127.43  Aligned_cols=113  Identities=27%  Similarity=0.324  Sum_probs=90.2

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      .|+|+|++|++|+.      .+..+.+||||+|.+.+     .++||+++.+ +.||+|||+|.|.+..+....|.|+||
T Consensus         2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v~   70 (118)
T cd08681           2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAVF   70 (118)
T ss_pred             EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEEE
Confidence            68999999999963      23456789999999865     4578998765 689999999999998766678999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc---ceEEEccCCCCCccCCeEEEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |++..+ +++||++.++++.+..|   -.+.+|.+ .|+  ..+.|.+++.|
T Consensus        71 d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~-~~~--~~G~i~l~l~f  118 (118)
T cd08681          71 DDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTL-KGR--YAGEVYLELTF  118 (118)
T ss_pred             eCCCCC-CcceEEEEEecHHHhhcCCCCCcEEecc-CCc--EeeEEEEEEEC
Confidence            998766 89999999999998654   35678865 333  34578888876

Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr

>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein

Probab=99.65  E-value=1.9e-15  Score=127.19  Aligned_cols=116  Identities=25%  Similarity=0.345  Sum_probs=91.9

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |.|+|++|++|+.        ..+.+||||.+.+.+   ...++||++++++.||+|||+|.|.+. ++...|.|.|||+
T Consensus         1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~-~~~~~l~~~v~d~   68 (126)
T cd08678           1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELS-PNSKELLFEVYDN   68 (126)
T ss_pred             CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeC-CCCCEEEEEEEEC
Confidence            5799999999852        245789999999853   124679999999999999999999985 3346799999999


Q ss_pred             CCCCCCCccEEEEEECccccCcc---eEEEccCCCCC-ccCCeEEEEEEEEC
Q 017257          327 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEFI  374 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~-~~~~~~L~v~i~f~  374 (374)
                      +..+++++||++.++++.|..+.   .+.+|....++ .-..++|.+++.|+
T Consensus        69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~  120 (126)
T cd08678          69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM  120 (126)
T ss_pred             CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence            98888999999999999987543   45688765442 22356899999884

The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a

>cd08375 C2_Intersectin C2 domain present in Intersectin

Probab=99.65  E-value=2.3e-15  Score=128.64  Aligned_cols=93  Identities=27%  Similarity=0.389  Sum_probs=80.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      -+.|+|+|++|++|+.      .+..+.+||||+|.+.+     .++||++++++.||.|||+|.|.+..+....|.|.|
T Consensus        14 ~G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V   82 (136)
T cd08375          14 IGRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITV   82 (136)
T ss_pred             cEEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEE
Confidence            3679999999999853      23456789999999842     568999999999999999999999877778999999


Q ss_pred             EeeCCCCCCCccEEEEEECccccC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~  347 (374)
                      ||+|..+++++||++.+++.++..
T Consensus        83 ~D~d~~~~d~~lG~~~i~l~~l~~  106 (136)
T cd08375          83 FDRDFFSPDDFLGRTEIRVADILK  106 (136)
T ss_pred             EECCCCCCCCeeEEEEEEHHHhcc
Confidence            999988889999999999999874

A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro

>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13

Probab=99.65  E-value=4.6e-16  Score=133.08  Aligned_cols=113  Identities=20%  Similarity=0.182  Sum_probs=86.4

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|+.|++|+..    ..+....+||||+|.+........++||++++++.||+|||+|.|.+...++  ..|.|
T Consensus        14 ~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~   89 (138)
T cd08407          14 ANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL   89 (138)
T ss_pred             CCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence            35699999999999642    1111233799999999864444457799999999999999999999876554  67999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcceEE-EccCCCCC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGE  360 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~v-pL~d~~g~  360 (374)
                      +|||+|..+++++||++.+++.+.-++.+|. .+++.-++
T Consensus        90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~  129 (138)
T cd08407          90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRR  129 (138)
T ss_pred             EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCC
Confidence            9999999999999999999998755555443 44443333

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy

>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins

Probab=99.65  E-value=1.3e-15  Score=124.06  Aligned_cols=96  Identities=27%  Similarity=0.362  Sum_probs=81.5

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |.|+|++|++|+.      .+..+.+||||+|.+.+     .++||++++++.||+|||+|.|.+..++...|.|+|+|+
T Consensus         2 L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~   70 (105)
T cd04050           2 LFVYLDSAKNLPL------AKSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD   70 (105)
T ss_pred             EEEEEeeecCCCC------cccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence            7899999999964      13346789999999975     578999999999999999999999988888999999998


Q ss_pred             CCCCCCCccEEEEEECccccCc-----ceEEEccC
Q 017257          327 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD  356 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~G-----yR~vpL~d  356 (374)
                      +.   +++||++.++|..|..+     -+|.+|.+
T Consensus        71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~  102 (105)
T cd04050          71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN  102 (105)
T ss_pred             CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence            74   78999999999998643     35777754

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm

>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4

Probab=99.64  E-value=2.7e-15  Score=125.54  Aligned_cols=115  Identities=24%  Similarity=0.315  Sum_probs=89.0

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|+|+|++|++|+.      .+..+.+||||+|.+.+     .+.+|++++++.||+|||+|.|.+..+....|.|+|||
T Consensus         1 ~L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d   69 (123)
T cd04025           1 RLRCHVLEARDLAP------KDRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWD   69 (123)
T ss_pred             CEEEEEEEeeCCCC------CCCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEE
Confidence            38999999999853      23345689999999854     45789999999999999999999877666789999999


Q ss_pred             eCCCCCCCccEEEEEECccccCc---ceEEEccCCCCCc----cCCeEEEEEE
Q 017257          326 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGER----YKSVKLLMHF  371 (374)
Q Consensus       326 ~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g~~----~~~~~L~v~i  371 (374)
                      ++..+++++||++.+++.++..+   ..|..|.......    -..+.|.+.|
T Consensus        70 ~~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~  122 (123)
T cd04025          70 WDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV  122 (123)
T ss_pred             CCCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence            99888899999999999999654   3466666432221    1235666655

RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a

>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins

Probab=99.64  E-value=1.7e-15  Score=126.78  Aligned_cols=105  Identities=24%  Similarity=0.338  Sum_probs=83.0

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-C--CccEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--ELALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-p--ela~Lr  320 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. .  ....|+
T Consensus        15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~   88 (125)
T cd04031          15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE   88 (125)
T ss_pred             CCEEEEEEEEecCCCC------cCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence            3579999999999853      133467899999999765555567899999999999999999998643 2  236899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECcccc--CcceEEEc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELK--QGIRAVPL  354 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~--~GyR~vpL  354 (374)
                      |+|||++..+++++||++.++|+...  .+-.|.+|
T Consensus        89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L  124 (125)
T cd04031          89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL  124 (125)
T ss_pred             EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence            99999998888999999999999732  22345555

RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as

>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins

Probab=99.64  E-value=2.3e-15  Score=124.27  Aligned_cols=111  Identities=29%  Similarity=0.464  Sum_probs=90.2

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|+|++|++++..      +..+.+||||+|.+.+    ...++|+++.++.||+|||+|.|.+.......|.|.|||+
T Consensus         1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~   70 (115)
T cd04040           1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW   70 (115)
T ss_pred             CEEEEEeeeCCCCC------CCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence            57899999998642      2345679999999965    2357999999999999999999998765557899999999


Q ss_pred             CCCCCCCccEEEEEECccccCc---ceEEEccCCCCCccCCeEEEE
Q 017257          327 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM  369 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g~~~~~~~L~v  369 (374)
                      +..+++++||++.+++..+..|   .++++|....|..  .+.||+
T Consensus        71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~  114 (115)
T cd04040          71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL  114 (115)
T ss_pred             CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence            9888899999999999999887   6789998765543  445653

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin

Probab=99.64  E-value=4.1e-15  Score=125.22  Aligned_cols=110  Identities=26%  Similarity=0.372  Sum_probs=91.8

Q ss_pred             EEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCC
Q 017257          251 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM  328 (374)
Q Consensus       251 Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~  328 (374)
                      |++|++|+.        ..+..||||+|.+.+     .++||++++++.||+|||+|.|.+..+  +...|.|+|||++.
T Consensus         2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~   68 (127)
T cd08373           2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK   68 (127)
T ss_pred             eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence            678888752        245689999999865     467999999999999999999998654  45789999999998


Q ss_pred             CCCCCccEEEEEECccccCcce---EEEccCCCCCccCCeEEEEEEEEC
Q 017257          329 SEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       329 ~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      .+++++||++.++++.+..+.+   +.||.+..+.++. +.|.+.+.|.
T Consensus        69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~~  116 (127)
T cd08373          69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSYQ  116 (127)
T ss_pred             CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEEe
Confidence            8889999999999999987654   6899998888765 5888888773

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone

Probab=99.64  E-value=1.2e-15  Score=125.32  Aligned_cols=99  Identities=25%  Similarity=0.315  Sum_probs=83.0

Q ss_pred             EEEEEEeccccccCCCCCccc-CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCcc-CcEEEEEeecCCc--cEEEEE
Q 017257          247 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~-~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~W-ne~f~F~v~~pel--a~Lrf~  322 (374)
                      |+|+|++|++|+..      + ..+.+||||+|.+.+     .++||++++++.||+| ||+|.|.+..+++  ..|.|+
T Consensus         1 l~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~   69 (110)
T cd08688           1 LKVRVVAARDLPVM------DRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR   69 (110)
T ss_pred             CEEEEEEEECCCcc------ccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence            57999999998631      2 135679999999854     6789999999999999 9999999977654  589999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccC---cc---eEEEccC
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHD  356 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~---Gy---R~vpL~d  356 (374)
                      |||++..+++++||++.+++.+|..   ++   +|.+|+|
T Consensus        70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~  109 (110)
T cd08688          70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD  109 (110)
T ss_pred             EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence            9999988889999999999999976   33   4788876

The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a

>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4

Probab=99.64  E-value=5e-16  Score=132.50  Aligned_cols=112  Identities=21%  Similarity=0.186  Sum_probs=89.8

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|++|++|+.      .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...++  ..|.|+
T Consensus        15 ~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~~   88 (136)
T cd08404          15 NRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEFL   88 (136)
T ss_pred             CeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEEE
Confidence            569999999999863      234567899999999754333456799999999999999999999865443  468999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcceEE-EccCCCCCcc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY  362 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~v-pL~d~~g~~~  362 (374)
                      |||+|..+++++||++.+++.+...|+++. .|.+..|+++
T Consensus        89 v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i  129 (136)
T cd08404          89 VLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI  129 (136)
T ss_pred             EEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence            999998888999999999999976666654 5666667664

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s

>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin

Probab=99.63  E-value=1.6e-15  Score=131.64  Aligned_cols=107  Identities=24%  Similarity=0.363  Sum_probs=83.1

Q ss_pred             EEEEEEEeccccccCCCCC--------cccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-
Q 017257          246 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-  316 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~--------~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-  316 (374)
                      +|.|+|+.|++|+......        -.+..+.+||||+|.+.|     .+.||++++++.||+|||+|.|.+..|.. 
T Consensus         1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~   75 (151)
T cd04018           1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC   75 (151)
T ss_pred             CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence            3789999999997521000        001224579999999876     35689999999999999999999877765 


Q ss_pred             cEEEEEEEeeCCCCCCCccEEEEEECccccC-c---------ceEEEccCC
Q 017257          317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---------IRAVPLHDR  357 (374)
Q Consensus       317 a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~-G---------yR~vpL~d~  357 (374)
                      ..|.|+|||+|..+++++||++.+++.+|.. |         -+|+.|++.
T Consensus        76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~  126 (151)
T cd04018          76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS  126 (151)
T ss_pred             CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence            4899999999988889999999999998753 2         266777654

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>cd08680 C2_Kibra C2 domain found in Human protein Kibra

Probab=99.63  E-value=1.6e-15  Score=127.46  Aligned_cols=97  Identities=21%  Similarity=0.329  Sum_probs=80.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ..|.|+|+.|++|+..      +..+.+||||+|.+...... ..++||++++++.||+|||+|.|++...++  ..|+|
T Consensus        14 ~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~~   87 (124)
T cd08680          14 SSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQV   87 (124)
T ss_pred             CEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEEE
Confidence            5699999999999631      23456899999999754332 357899999999999999999999876655  48999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~  347 (374)
                      +|||++..+++++||++.|+++.+..
T Consensus        88 ~V~~~~~~~~~~~lG~~~i~L~~~~~  113 (124)
T cd08680          88 DVCSVGPDQQEECLGGAQISLADFES  113 (124)
T ss_pred             EEEeCCCCCceeEEEEEEEEhhhccC
Confidence            99999988889999999999998843

Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom

>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10

Probab=99.63  E-value=2.5e-15  Score=125.85  Aligned_cols=97  Identities=24%  Similarity=0.311  Sum_probs=80.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|+|+|++|++|+.      .+..+.+||||+|.+.+  ....++||++++++.||+|||+|.|.+..+++  ..|+|.
T Consensus        16 ~~L~V~v~~a~~L~~------~d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~~   87 (124)
T cd08385          16 NQLTVGIIQAADLPA------MDMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVFS   87 (124)
T ss_pred             CEEEEEEEEeeCCCC------ccCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEEE
Confidence            579999999999863      12345689999999964  33356799999999999999999999876544  489999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      |||++..+++++||++.++++.+..|.
T Consensus        88 V~d~d~~~~~~~lG~~~i~l~~~~~~~  114 (124)
T cd08385          88 VYDFDRFSKHDLIGEVRVPLLTVDLGH  114 (124)
T ss_pred             EEeCCCCCCCceeEEEEEecCcccCCC
Confidence            999998888999999999999986664

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and

>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins

Probab=99.62  E-value=4.8e-15  Score=124.29  Aligned_cols=113  Identities=20%  Similarity=0.365  Sum_probs=89.8

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|+|++|++|+.      .+..+.+||||+|.+.|    ...+||++++++.||+|||+|.|.+..  ...|.|+|||+
T Consensus         2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~   69 (123)
T cd08382           2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ   69 (123)
T ss_pred             eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence            7899999999853      23456789999999865    356799999999999999999999854  56899999999


Q ss_pred             CCCCC--CCccEEEEEECccccC----cceEEEccCCCCCc--cCCeEEEEEE
Q 017257          327 DMSEK--DDFGGQTCLPVSELKQ----GIRAVPLHDRKGER--YKSVKLLMHF  371 (374)
Q Consensus       327 d~~~~--dd~iG~~~ipl~~L~~----GyR~vpL~d~~g~~--~~~~~L~v~i  371 (374)
                      +..++  ++|||++.++++.|..    +..|++|.+.....  ...++|.+++
T Consensus        70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~  122 (123)
T cd08382          70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL  122 (123)
T ss_pred             CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence            87664  5799999999999742    36789997766432  2345787765

A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are

>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family

Probab=99.62  E-value=2e-15  Score=126.00  Aligned_cols=98  Identities=16%  Similarity=0.208  Sum_probs=80.0

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V  323 (374)
                      ..|.|+|+.|++|+.      .+ .+.+||||+|.+...+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus        12 ~~L~V~Vi~ar~L~~------~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V   84 (119)
T cd08685          12 RKLTLHVLEAKGLRS------TN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV   84 (119)
T ss_pred             CEEEEEEEEEECCCC------CC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence            569999999999853      13 356899999999865555567799999999999999999999865443 4688999


Q ss_pred             EeeCCCC-CCCccEEEEEECccccCcc
Q 017257          324 HEYDMSE-KDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       324 ~D~d~~~-~dd~iG~~~ipl~~L~~Gy  349 (374)
                      ||++... ++++||.+.||+.++..|-
T Consensus        85 ~~~~~~~~~~~~lG~~~i~l~~~~~~~  111 (119)
T cd08685          85 WNKLSKSRDSGLLGCMSFGVKSIVNQK  111 (119)
T ss_pred             ECCCCCcCCCEEEEEEEecHHHhccCc
Confidence            9988764 4789999999999997553

This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho

>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]

Probab=99.62  E-value=1.3e-15  Score=131.39  Aligned_cols=92  Identities=28%  Similarity=0.454  Sum_probs=80.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|+|+|+.|.+|..      .|..+.+||||.+++.+     ++.||+++.+|.||+|||+|.|.+..|. ..|.++||
T Consensus         6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~~-~~lkv~Vy   73 (168)
T KOG1030|consen    6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDPN-TPLKVTVY   73 (168)
T ss_pred             eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCCC-ceEEEEEE
Confidence            568999999999853      34446789999999875     6889999999999999999999998875 57999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |+|.++.|||+|.++||+..+..+
T Consensus        74 D~D~fs~dD~mG~A~I~l~p~~~~   97 (168)
T KOG1030|consen   74 DKDTFSSDDFMGEATIPLKPLLEA   97 (168)
T ss_pred             eCCCCCcccccceeeeccHHHHHH
Confidence            999999999999999999988654

>cd04032 C2_Perforin C2 domain of Perforin

Probab=99.62  E-value=4.7e-15  Score=125.04  Aligned_cols=93  Identities=29%  Similarity=0.371  Sum_probs=78.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEee-cCCccEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPELALLRIE  322 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~-~pela~Lrf~  322 (374)
                      ..+|+|+|++|++|+.       +..+.+||||+|.+.+     .++||++++++.||+|||+|.|... .+....|+|+
T Consensus        27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~   94 (127)
T cd04032          27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE   94 (127)
T ss_pred             cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence            4689999999999852       2346689999999865     2789999999999999999999753 3456789999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |||++..+++++||++.++|...-.+
T Consensus        95 V~D~d~~s~dd~IG~~~i~l~~~~~~  120 (127)
T cd04032          95 VWDRDNGWDDDLLGTCSVVPEAGVHE  120 (127)
T ss_pred             EEeCCCCCCCCeeEEEEEEecCCcee
Confidence            99999888899999999999976655

Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few

>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1

Probab=99.61  E-value=1e-15  Score=130.53  Aligned_cols=111  Identities=20%  Similarity=0.245  Sum_probs=88.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|+|+|++|++|+.      .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++  ..|+|+
T Consensus        15 ~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~~   88 (136)
T cd08402          15 GKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIVT   88 (136)
T ss_pred             CeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEEE
Confidence            579999999999863      233567899999999754444456789999999999999999999865554  479999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcceE-EEccCCCCCc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGER  361 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~-vpL~d~~g~~  361 (374)
                      |||++..+++++||++.+++.+...++.| .+|+...+++
T Consensus        89 v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~  128 (136)
T cd08402          89 VLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRP  128 (136)
T ss_pred             EEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCe
Confidence            99999888899999999999988766643 4665554444

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:

>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins

Probab=99.61  E-value=4.3e-15  Score=124.80  Aligned_cols=98  Identities=29%  Similarity=0.367  Sum_probs=81.0

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|+|+|++|++|+..      +..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++  ..|.|.
T Consensus        16 ~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i~   89 (127)
T cd04030          16 QKLIVTVHKCRNLPPC------DSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDVA   89 (127)
T ss_pred             CEEEEEEEEEECCCCc------cCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEEE
Confidence            5799999999999642      33467899999999765444567899999999999999999999865433  589999


Q ss_pred             EEeeCCC--CCCCccEEEEEECccccCc
Q 017257          323 VHEYDMS--EKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       323 V~D~d~~--~~dd~iG~~~ipl~~L~~G  348 (374)
                      |||++..  +++++||++.++|..|..+
T Consensus        90 v~~~~~~~~~~~~~iG~~~i~l~~l~~~  117 (127)
T cd04030          90 VKNSKSFLSREKKLLGQVLIDLSDLDLS  117 (127)
T ss_pred             EEECCcccCCCCceEEEEEEeccccccc
Confidence            9998864  5799999999999998654

KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1

>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin

Probab=99.61  E-value=5e-15  Score=121.81  Aligned_cols=97  Identities=21%  Similarity=0.180  Sum_probs=81.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC----ccEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALLR  320 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe----la~Lr  320 (374)
                      ..|+|+|++|++|+          .+.+||||+|.+.+     .++||++++++.||.|||+|.|.+..+.    -+.|.
T Consensus         4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~   68 (111)
T cd04011           4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIK   68 (111)
T ss_pred             EEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEE
Confidence            56899999999984          23579999999975     4678999999999999999999986554    25799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc------eEEEccC
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI------RAVPLHD  356 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy------R~vpL~d  356 (374)
                      |.|||++..+++++||++.++|+.+..+.      +|++|.|
T Consensus        69 i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~  110 (111)
T cd04011          69 ISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTD  110 (111)
T ss_pred             EEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeC
Confidence            99999998888999999999999996653      4677765

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme

>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins

Probab=99.61  E-value=1.4e-14  Score=120.34  Aligned_cols=117  Identities=25%  Similarity=0.319  Sum_probs=89.6

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|+|+|++|++|+...........+.+||||+|.+.+     ..++|++++++.||+|||+|.|.+..+....|.|+|||
T Consensus         2 ~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~d   76 (121)
T cd08391           2 VLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELFD   76 (121)
T ss_pred             eEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEEe
Confidence            5899999999986421000000124689999999864     56899999999999999999999876556789999999


Q ss_pred             eCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257          326 YDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       326 ~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ++.. ++++||++.++++.+..+-   .|++|.+.     ..+.|.++++|
T Consensus        77 ~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~  121 (121)
T cd08391          77 EDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW  121 (121)
T ss_pred             cCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence            9877 7999999999999986542   67888764     33567777764

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular

>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins

Probab=99.61  E-value=1.4e-14  Score=121.65  Aligned_cols=117  Identities=22%  Similarity=0.325  Sum_probs=92.7

Q ss_pred             EEEEEEEeccccccCCCCCcccC--CCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDA--YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~--~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      .|+|+|++|++|+..      +.  .+.+||||.|.+.+     .+++|++++++.||.|||+|.|.+..+....|.|+|
T Consensus         2 ~l~v~v~~a~~L~~~------~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v   70 (128)
T cd04024           2 VLRVHVVEAKDLAAK------DRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL   70 (128)
T ss_pred             EEEEEEEEeeCCCcc------cCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence            589999999998631      22  45689999999743     568999999999999999999999875567899999


Q ss_pred             EeeCCCCCCCccEEEEEECcccc----Cc--ceEEEccCCCCC--ccCCeEEEEEEEE
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF  373 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~----~G--yR~vpL~d~~g~--~~~~~~L~v~i~f  373 (374)
                      ||++..+++++||++.+++..+.    .|  -.|++|.+....  ....+.|.+++.+
T Consensus        71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~  128 (128)
T cd04024          71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW  128 (128)
T ss_pred             EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence            99998878999999999999985    23  357888876322  2245678887753

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu

>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8

Probab=99.60  E-value=4.7e-15  Score=124.28  Aligned_cols=97  Identities=23%  Similarity=0.343  Sum_probs=80.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|++|++|+.      .+..+.+||||+|.+.  +.....+||++++++.||+|||+|.|.+...++  ..|+|+
T Consensus        16 ~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i~   87 (124)
T cd08387          16 GILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEVL   87 (124)
T ss_pred             CEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEEE
Confidence            579999999999863      2334568999999995  333456899999999999999999999865543  479999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      |||++..+++++||++.++++++..+-
T Consensus        88 V~d~~~~~~~~~iG~~~i~l~~~~~~~  114 (124)
T cd08387          88 LYDFDQFSRDECIGVVELPLAEVDLSE  114 (124)
T ss_pred             EEECCCCCCCceeEEEEEecccccCCC
Confidence            999998888999999999999997654

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv

>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins

Probab=99.60  E-value=6.3e-15  Score=123.04  Aligned_cols=99  Identities=19%  Similarity=0.291  Sum_probs=80.6

Q ss_pred             ceEEEEEEEeccccccCCCCCccc-CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~-~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr  320 (374)
                      ...|+|+|++|++|+..      + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++  ..|.
T Consensus        13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~   86 (123)
T cd08521          13 TGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ   86 (123)
T ss_pred             CCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence            35799999999999642      2 2356899999998653333356899999999999999999999865443  5799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |.|||++..+++++||++.++|+.+..|
T Consensus        87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~  114 (123)
T cd08521          87 LSVWHHDRFGRNTFLGEVEIPLDSWDLD  114 (123)
T ss_pred             EEEEeCCCCcCCceeeEEEEeccccccc
Confidence            9999999888899999999999999654

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into

>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11

Probab=99.60  E-value=6.2e-15  Score=124.62  Aligned_cols=96  Identities=22%  Similarity=0.293  Sum_probs=77.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCC-CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEE-EeecCCc--cEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPEL--ALLR  320 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~-s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F-~v~~pel--a~Lr  320 (374)
                      .+|+|+|++|++|+..      +.. +.+||||+|.+..  .+..+.||++++++.||+|||+|.| .+...++  ..|+
T Consensus        16 ~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L~   87 (128)
T cd08388          16 KALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSLH   87 (128)
T ss_pred             CEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEEE
Confidence            5799999999999642      222 5689999999863  3345679999999999999999999 3432222  4699


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |.|||+|..+++++||++++||+++..+
T Consensus        88 ~~V~d~d~~~~d~~lG~~~i~L~~l~~~  115 (128)
T cd08388          88 FAVLSFDRYSRDDVIGEVVCPLAGADLL  115 (128)
T ss_pred             EEEEEcCCCCCCceeEEEEEeccccCCC
Confidence            9999999888899999999999998543

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence

>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain

Probab=99.60  E-value=2.3e-15  Score=127.68  Aligned_cols=112  Identities=18%  Similarity=0.255  Sum_probs=86.5

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++  ..|.|
T Consensus        12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~   85 (133)
T cd08384          12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI   85 (133)
T ss_pred             CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence            3679999999999863      233457899999999764444456799999999999999999999876554  47999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGER  361 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~  361 (374)
                      .|||+|..+++++||++.+++.+..+.. .|..++..-+++
T Consensus        86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~  126 (133)
T cd08384          86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKK  126 (133)
T ss_pred             EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCC
Confidence            9999998888999999999998743322 233454444444

Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai

>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group

Probab=99.60  E-value=2.3e-14  Score=120.24  Aligned_cols=113  Identities=20%  Similarity=0.308  Sum_probs=86.9

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|+|+|++|++|+.      .+..+.+||||+|.+.+.  .....||++++++.||.|||+|.|.+..+....|.|+|||
T Consensus         2 ~~~V~v~~a~~L~~------~~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d   73 (126)
T cd04043           2 LFTIRIVRAENLKA------DSSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD   73 (126)
T ss_pred             EEEEEEEEeECCCC------CCCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence            58999999999864      233567899999986532  1345799999999999999999999877656789999999


Q ss_pred             eCCCCCCCccEEEEEECccccC---cc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257          326 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       326 ~d~~~~dd~iG~~~ipl~~L~~---Gy---R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ++..+++++||++.++|+.+..   |.   +|++|.. .      +.|.+.+.+
T Consensus        74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~------g~i~l~~~~  120 (126)
T cd04043          74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-Q------GRLLLRVSM  120 (126)
T ss_pred             CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-C------CeEEEEEEE
Confidence            9988789999999999987643   32   4677742 3      355555544

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap

>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins

Probab=99.60  E-value=6.8e-15  Score=125.08  Aligned_cols=96  Identities=26%  Similarity=0.449  Sum_probs=79.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC--CceeeeeeeccCCCCCccCcEEEEEeecC----CccE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELAL  318 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~--d~~k~kTk~v~~~~nP~Wne~f~F~v~~p----ela~  318 (374)
                      ..|+|+|++|++|+..      +..+.+||||+|.+.+...  ...++||+++++++||+|||+|.|.+...    ....
T Consensus        16 ~~L~V~Vi~A~~L~~~------~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~   89 (133)
T cd04009          16 QSLRVEILNARNLLPL------DSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL   89 (133)
T ss_pred             CEEEEEEEEeeCCCCc------CCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence            5699999999999631      3345689999999975432  24578999999999999999999998652    2468


Q ss_pred             EEEEEEeeCCCCCCCccEEEEEECcccc
Q 017257          319 LRIEVHEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       319 Lrf~V~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      |.|.|||++..+++++||++.++|++|.
T Consensus        90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~  117 (133)
T cd04009          90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP  117 (133)
T ss_pred             EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence            9999999998888999999999999986

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s

>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4

Probab=99.59  E-value=2e-14  Score=120.24  Aligned_cols=115  Identities=18%  Similarity=0.224  Sum_probs=88.0

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |.|+|+.|++|+.      .+..+..||||+|.+.+    ....||++++++.||+|||.|.|.+... ...|.|.|||+
T Consensus         2 l~v~vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~   70 (121)
T cd04054           2 LYIRIVEGKNLPA------KDITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE   70 (121)
T ss_pred             EEEEEEEeeCCcC------CCCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence            7899999999853      23346789999999864    2346999999999999999999988543 46899999999


Q ss_pred             CCCCCCCccEEEEEECccccCc----ceEEEccCCCCCccCCeEEEEEEE
Q 017257          327 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHFE  372 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~G----yR~vpL~d~~g~~~~~~~L~v~i~  372 (374)
                      +..+++++||++.+++..+..+    ..|++|....+..-..+.|.+.+.
T Consensus        71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~  120 (121)
T cd04054          71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS  120 (121)
T ss_pred             CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence            9888899999999999887643    358888653322223346665543

Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.

>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10

Probab=99.59  E-value=2.3e-15  Score=127.95  Aligned_cols=113  Identities=19%  Similarity=0.200  Sum_probs=88.2

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|+|+|++|++|+.      .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++  ..|.|
T Consensus        13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~   86 (134)
T cd08403          13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII   86 (134)
T ss_pred             CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence            3579999999999863      234567899999998643333456789999999999999999999764433  46899


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcceE-EEccCCCCCcc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY  362 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~-vpL~d~~g~~~  362 (374)
                      +|||++..+++++||++.+++....+|+++ ..+....|+++
T Consensus        87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~  128 (134)
T cd08403          87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI  128 (134)
T ss_pred             EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence            999999888899999999999877777754 35555556553

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind

>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3

Probab=99.59  E-value=2.7e-14  Score=119.52  Aligned_cols=115  Identities=19%  Similarity=0.290  Sum_probs=87.8

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|+|+.|.+|+..   .  ...+..||||.|.+.+    ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus         2 l~v~v~~a~~L~~~---~--~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~   71 (121)
T cd08401           2 LKIKIGEAKNLPPR---S--GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR   71 (121)
T ss_pred             eEEEEEEccCCCCC---C--CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence            68999999999641   1  1134679999999843    2357899999999999999999998643 36899999999


Q ss_pred             CCCCCCCccEEEEEECccccCcc---eEEEccC--CCCCccCCeEEEEEEEE
Q 017257          327 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHD--RKGERYKSVKLLMHFEF  373 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d--~~g~~~~~~~L~v~i~f  373 (374)
                      +..+++++||.+.++++.+..|.   .|.+|.-  ..++  ..+.|.+.+.|
T Consensus        72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~--~~G~i~l~~~~  121 (121)
T cd08401          72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSE--VQGKVHLELRL  121 (121)
T ss_pred             CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCc--ccEEEEEEEEC
Confidence            98888999999999999997543   4777753  2222  35677666553

RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p

>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17

Probab=99.59  E-value=2.9e-15  Score=127.79  Aligned_cols=112  Identities=17%  Similarity=0.172  Sum_probs=84.0

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|+|+|++|++|+.      .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++  ..|+|+
T Consensus        14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~   87 (135)
T cd08410          14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT   87 (135)
T ss_pred             CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence            569999999999863      234567899999998532222345789999999999999999999865555  469999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCc--ceEEEccCCCCCcc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRKGERY  362 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~G--yR~vpL~d~~g~~~  362 (374)
                      |||+|..+++++||++.|........  -.|-.|++..+.++
T Consensus        88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~  129 (135)
T cd08410          88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV  129 (135)
T ss_pred             EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence            99999888899999998776555432  23445555555543

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-

>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon

Probab=99.59  E-value=3.1e-14  Score=120.76  Aligned_cols=116  Identities=24%  Similarity=0.210  Sum_probs=88.3

Q ss_pred             eEEEEEEEeccccccCCCCCc--c--cCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTH--F--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR  320 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~--~--~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lr  320 (374)
                      ..|+|+|+.|++|........  .  ...+..||||+|.+.+    ....+|++++++.||.|||+|+|.+.  +.+.|.
T Consensus         4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~   77 (132)
T cd04014           4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE   77 (132)
T ss_pred             eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence            569999999999853100000  0  0124679999999864    23468999999999999999999986  457899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccC-----cceEEEccCCCCCccCCeEEEEEEEE
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~-----GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.|+|++..+.+++||++.++|+++..     +..|++|.       +.+.|.|++.+
T Consensus        78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~  128 (132)
T cd04014          78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIEL  128 (132)
T ss_pred             EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEE
Confidence            999999887788999999999999876     24678884       24577777765

A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that

>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins

Probab=99.58  E-value=3.3e-14  Score=119.93  Aligned_cols=114  Identities=29%  Similarity=0.413  Sum_probs=89.0

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|+|+|++|++|+.      .+..+..||||+|.+.+     ...+|+++.++.||.|||+|.|.+..+. ..|.|.|||
T Consensus         2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~~-~~l~i~v~d   69 (127)
T cd04027           2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNSS-DRIKVRVWD   69 (127)
T ss_pred             eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCCC-CEEEEEEEE
Confidence            58999999999864      23356789999999843     4679999999999999999999886553 579999999


Q ss_pred             eCCC-----------CCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEE
Q 017257          326 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF  371 (374)
Q Consensus       326 ~d~~-----------~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i  371 (374)
                      +|..           +.+++||++.+++.++..+. .|.+|....+.....+.|.+++
T Consensus        70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~  127 (127)
T cd04027          70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI  127 (127)
T ss_pred             CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence            9842           46899999999999886544 5778876555544456777764

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev

>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins

Probab=99.58  E-value=8.6e-15  Score=122.78  Aligned_cols=107  Identities=27%  Similarity=0.332  Sum_probs=87.4

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCC----ccEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR  320 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pe----la~Lr  320 (374)
                      +|+|+|++|++|+..      +..+.+||||+|.+.+    ..+++|+++.+ +.||+|||+|.|.+..++    ...|.
T Consensus         1 ~L~V~V~sA~~L~~~------~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~   70 (125)
T cd04051           1 TLEITIISAEDLKNV------NLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT   70 (125)
T ss_pred             CEEEEEEEcccCCCC------CcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence            489999999998642      3346789999999975    34678998865 689999999999997774    47899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcce--------EEEccCCCCCcc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR--------AVPLHDRKGERY  362 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~GyR--------~vpL~d~~g~~~  362 (374)
                      |+|||++..+.+++||++.+|+.++..+.+        +.+|.+..|++-
T Consensus        71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~  120 (125)
T cd04051          71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQ  120 (125)
T ss_pred             EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcC
Confidence            999999877779999999999999976553        468888887763

SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such

>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7

Probab=99.57  E-value=2.1e-14  Score=120.39  Aligned_cols=98  Identities=21%  Similarity=0.277  Sum_probs=79.3

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec---CCccEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lr  320 (374)
                      ...|.|+|++|++|+.      .+..+..||||+|.+..  .+..+.||++++++.||+|||+|.|.+..   .....|.
T Consensus        15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~   86 (125)
T cd08386          15 ESTLTLKILKAVELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY   86 (125)
T ss_pred             CCEEEEEEEEecCCCC------ccCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence            3579999999999863      23345689999999853  33456899999999999999999997532   1235799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      |+|||+|..+++++||++.++++.+..|.
T Consensus        87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~~  115 (125)
T cd08386          87 LQVLDYDRFSRNDPIGEVSLPLNKVDLTE  115 (125)
T ss_pred             EEEEeCCCCcCCcEeeEEEEecccccCCC
Confidence            99999998888999999999999997664

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves

>cd04048 C2A_Copine C2 domain first repeat in Copine

Probab=99.57  E-value=1.7e-14  Score=120.28  Aligned_cols=103  Identities=21%  Similarity=0.247  Sum_probs=82.3

Q ss_pred             EEeccccccCCCCCcccCCCCCCceEEEEEecCC--CCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCC
Q 017257          251 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM  328 (374)
Q Consensus       251 Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~--~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~  328 (374)
                      .|+|++|+.      .+..+.+||||+|.+.+..  .....+||++++++.||+|||+|.|.+..++...|+|+|||+|.
T Consensus         6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~   79 (120)
T cd04048           6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS   79 (120)
T ss_pred             EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence            478888853      2335678999999998754  23346899999999999999999999877777889999999997


Q ss_pred             ----CCCCCccEEEEEECccccCcc---eEEEccCCCC
Q 017257          329 ----SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG  359 (374)
Q Consensus       329 ----~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g  359 (374)
                          .+++++||++.+++++|..+-   ...+|.+..+
T Consensus        80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~  117 (120)
T cd04048          80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG  117 (120)
T ss_pred             CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence                678999999999999997543   3557755444

There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma

>cd04046 C2_Calpain C2 domain present in Calpain proteins

Probab=99.57  E-value=9.9e-14  Score=116.81  Aligned_cols=116  Identities=20%  Similarity=0.247  Sum_probs=89.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|+|+|++|++|+.      .+..+.+||||+|.+.+     .+.||++++++.||+|||.|.|.+..+ -..|.|.||
T Consensus         3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~   70 (126)
T cd04046           3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW   70 (126)
T ss_pred             EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence            468999999999853      23456789999998764     468999999999999999999987655 467999999


Q ss_pred             eeCCCCCCCccEEEEEECccccC-cceEEEccCCCC--CccCCeEEEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQ-GIRAVPLHDRKG--ERYKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~-GyR~vpL~d~~g--~~~~~~~L~v~i~f  373 (374)
                      |++... +++||.+.++++.+.. .+++++|.....  .-...++|.+++.+
T Consensus        71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~i~~~~~~  121 (126)
T cd04046          71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEVPGTISVKVTS  121 (126)
T ss_pred             ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCCCCEEEEEEEE
Confidence            998764 8999999999997754 467888853221  11234577777654

A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic

>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7

Probab=99.57  E-value=4.4e-15  Score=126.57  Aligned_cols=112  Identities=18%  Similarity=0.179  Sum_probs=86.2

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC--ccEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe--la~Lrf~  322 (374)
                      .+|.|+|++|++|+.      .+..+..||||+|.+........+.||++++++.||+|||+|.|.+...+  ...|.|+
T Consensus        15 ~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~~   88 (136)
T cd08405          15 NRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLIIT   88 (136)
T ss_pred             CeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEEE
Confidence            579999999999853      23456789999999864333334679999999999999999999986433  3579999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCcc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY  362 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~  362 (374)
                      |||++..+++++||++.+++.+..... .|..|...-+.++
T Consensus        89 v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~  129 (136)
T cd08405          89 VMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV  129 (136)
T ss_pred             EEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence            999998888999999999999874433 3445655555543

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves

>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins

Probab=99.57  E-value=4.4e-14  Score=117.89  Aligned_cols=119  Identities=22%  Similarity=0.218  Sum_probs=92.2

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      +.|+|+|++|++|+..     ....+.+||||+|.+.+.   ....+|+++.++.||.|||.|.|.+. +....|.|+||
T Consensus         2 g~l~v~v~~a~~L~~~-----~~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~   72 (124)
T cd04044           2 GVLAVTIKSARGLKGS-----DIIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY   72 (124)
T ss_pred             eEEEEEEEcccCCCcc-----cccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence            4689999999998631     012245799999999752   35679999999999999999999987 44568999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCcceE---EEccCCCCCccCCeEEEEEEEEC
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGIRA---VPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~GyR~---vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |++..+++++||++.+++.++..+..+   ...+...|++  .+.|-|.++|+
T Consensus        73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~  123 (124)
T cd04044          73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF  123 (124)
T ss_pred             ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence            999887899999999999999865432   2333455554  46888888885

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16

Probab=99.56  E-value=2.1e-14  Score=120.69  Aligned_cols=101  Identities=22%  Similarity=0.237  Sum_probs=80.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eecCC--ccEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~pe--la~Lrf  321 (374)
                      ..|.|+|+.|++|+..      +..+..||||++.+.+.  ...++||+++++ .||+|||+|.|. +...+  ...|+|
T Consensus        16 ~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp~--~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~~   86 (124)
T cd08389          16 RKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLPS--KKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALRF   86 (124)
T ss_pred             CEEEEEEEEecCCCch------hcCCCCCcEEEEEEccC--CcceeecccccC-CCCcccCEEEECCCCHHHhccCEEEE
Confidence            5799999999999641      23455799999887643  346789999887 999999999998 54333  367999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcc---eEEEc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL  354 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL  354 (374)
                      +|||++..+++++||++.+||+.+..+-   .|++|
T Consensus        87 ~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L  122 (124)
T cd08389          87 RLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL  122 (124)
T ss_pred             EEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence            9999998888999999999999997653   34454

Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle

>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma

Probab=99.56  E-value=3e-14  Score=120.57  Aligned_cols=110  Identities=30%  Similarity=0.416  Sum_probs=89.3

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC-ccEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe-la~Lrf~V  323 (374)
                      ..|+|+|++|++|+..      +..+.+||||+|.+.+.+.+..++||++++++.||.|||+|.|.+..++ ...|.|.|
T Consensus        13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v   86 (131)
T cd04026          13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV   86 (131)
T ss_pred             CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence            5689999999998642      2235689999999987666667889999999999999999999987553 35899999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCc--ceEEEccCCC-CC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK-GE  360 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~G--yR~vpL~d~~-g~  360 (374)
                      ||++..+++++||++.++++++...  -.|.+|.+.. |+
T Consensus        87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~~~~  126 (131)
T cd04026          87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQEEGE  126 (131)
T ss_pred             EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCccccc
Confidence            9998877899999999999998643  3577887644 44

A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd

>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4

Probab=99.56  E-value=2.4e-14  Score=125.86  Aligned_cols=97  Identities=22%  Similarity=0.248  Sum_probs=79.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC-Cc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p-el--a~Lr  320 (374)
                      ...|.|+|++|.+|+..      +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++  ..|.
T Consensus        26 ~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~   99 (162)
T cd04020          26 TGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE   99 (162)
T ss_pred             CceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence            46799999999999642      335678999999996544445678999999999999999999986432 22  4799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECcccc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      |.|||++..+++++||++.++++.+.
T Consensus       100 i~V~d~d~~~~d~~lG~v~i~l~~~~  125 (162)
T cd04020         100 LTVWDHDKLSSNDFLGGVRLGLGTGK  125 (162)
T ss_pred             EEEEeCCCCCCCceEEEEEEeCCccc
Confidence            99999998888999999999999874

All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin

>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin

Probab=99.56  E-value=7.9e-14  Score=118.81  Aligned_cols=114  Identities=23%  Similarity=0.417  Sum_probs=87.0

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-C--------Cc
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL  316 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-p--------el  316 (374)
                      .|+|+|++|++|+.      .+..+.+||||+|.+.+     .++||++++++.||+|||+|.|.+.. +        +.
T Consensus         2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~   70 (135)
T cd04017           2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP   70 (135)
T ss_pred             EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence            58999999999863      23456789999999864     47899999999999999999997532 1        12


Q ss_pred             cEEEEEEEeeCCCCCCCccEEEEE-ECccccC------cceEEEccCCCCCccCCeEEEEEEEE
Q 017257          317 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ------GIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       317 a~Lrf~V~D~d~~~~dd~iG~~~i-pl~~L~~------GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ..|.|+|||+|..+++++||++.+ |+..++.      --+|.+|... |.  ..+.|+|.|++
T Consensus        71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~~-~~--~~Geil~~~~~  131 (135)
T cd04017          71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYKG-GQ--SAGELLAAFEL  131 (135)
T ss_pred             CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeecC-CC--chhheeEEeEE
Confidence            568999999998888999999986 6666652      2268888633 32  34578887775

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme

>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17

Probab=99.55  E-value=2.9e-14  Score=119.05  Aligned_cols=103  Identities=19%  Similarity=0.233  Sum_probs=82.6

Q ss_pred             ceEEEEEEEeccccccCCCCCccc-CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~-~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr  320 (374)
                      ...|.|+|++|++|+..      + ..+.+||||+|.+..  .+...++|++++++.||+|||+|.|.+...++  ..|.
T Consensus        13 ~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~   84 (123)
T cd08390          13 EEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR   84 (123)
T ss_pred             CCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence            35799999999998631      2 345689999999853  33446789999999999999999999876543  4799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc---eEEEc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL  354 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL  354 (374)
                      |.|||++..+++++||++.++|+++....   .|.+|
T Consensus        85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L  121 (123)
T cd08390          85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDL  121 (123)
T ss_pred             EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence            99999998878999999999999987654   45565

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat

>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin

Probab=99.55  E-value=3.7e-14  Score=119.15  Aligned_cols=91  Identities=20%  Similarity=0.364  Sum_probs=77.5

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|.|++|++|+.      .+..+.+||||+|.+.+.   ....||++++++.||+|||+|.|.+..++.+.|.|+|||+
T Consensus         2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~   72 (124)
T cd04037           2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY   72 (124)
T ss_pred             EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence            7899999999863      234567899999998653   2346788889999999999999998878778999999999


Q ss_pred             CCCCCCCccEEEEEECcccc
Q 017257          327 DMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~  346 (374)
                      |..+++++||++.+++....
T Consensus        73 d~~~~dd~iG~~~i~l~~~~   92 (124)
T cd04037          73 DLLGSDDLIGETVIDLEDRF   92 (124)
T ss_pred             CCCCCCceeEEEEEeecccc
Confidence            98888999999999999775

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1)

Probab=99.54  E-value=1.6e-13  Score=119.40  Aligned_cols=121  Identities=21%  Similarity=0.216  Sum_probs=88.2

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC--------ccE
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL  318 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe--------la~  318 (374)
                      ..++|..|.+++++    ..+..+..||||++++.-......+.||++++++.||+|||+|.|.|....        -..
T Consensus         4 ~el~i~~~~~~~l~----~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~   79 (155)
T cd08690           4 IELTIVRCIGIPLP----SGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG   79 (155)
T ss_pred             eEEEEEEeeccccC----CCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence            34566666665432    122234579999999743234456889999999999999999999985442        135


Q ss_pred             EEEEEEeeCCC-CCCCccEEEEEECccccCc--c-eEEEccCCCCCccCCeEEEEEEEE
Q 017257          319 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       319 Lrf~V~D~d~~-~~dd~iG~~~ipl~~L~~G--y-R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.|+|||++.+ .+|++||++.++|+.|..+  . .+++|++  |....|+.|-|++..
T Consensus        80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~  136 (155)
T cd08690          80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL  136 (155)
T ss_pred             EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence            89999999875 4699999999999999544  3 4679986  444567788888753

Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha

>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15

Probab=99.54  E-value=2.4e-14  Score=122.40  Aligned_cols=97  Identities=25%  Similarity=0.314  Sum_probs=78.3

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|++|++|+.      .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++  ..|+|.
T Consensus        15 ~~L~V~V~~a~nL~~------~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~~   87 (137)
T cd08409          15 NRLTVVVLRARGLRQ------LD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSLS   87 (137)
T ss_pred             CeEEEEEEEecCCCc------cc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEEE
Confidence            579999999999863      12 456899999999864333346799999999999999999999865444  689999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |||++..+++++||++.++......|
T Consensus        88 V~~~~~~~~~~~lG~v~ig~~~~~~~  113 (137)
T cd08409          88 VMQSGGVRKSKLLGRVVLGPFMYARG  113 (137)
T ss_pred             EEeCCCCCCcceEEEEEECCcccCCC
Confidence            99999888899999999997655444

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id

>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain

Probab=99.54  E-value=4e-14  Score=118.47  Aligned_cols=99  Identities=24%  Similarity=0.355  Sum_probs=80.3

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEe-ecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v-~~pel--a~Lr  320 (374)
                      ...|+|+|++|++|+.      .+..+.+||||+|.+.+...+....||++++++.||+|||+|.|.. ...++  ..|.
T Consensus        14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~   87 (123)
T cd04035          14 NSALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR   87 (123)
T ss_pred             CCEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence            3579999999999863      2334578999999997655555678999999999999999999963 33333  4799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      |+|||++.. .+++||++.+++++|..+-
T Consensus        88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~~  115 (123)
T cd04035          88 LLVLDEDRF-GNDFLGETRIPLKKLKPNQ  115 (123)
T ss_pred             EEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence            999999877 7899999999999998763

Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain

>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16

Probab=99.53  E-value=4e-14  Score=121.24  Aligned_cols=98  Identities=18%  Similarity=0.252  Sum_probs=79.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr  320 (374)
                      ..+|.|+|+.|.+|+.      .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++  ..|.
T Consensus        14 ~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~   87 (138)
T cd08408          14 TGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM   87 (138)
T ss_pred             CCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence            3579999999999863      234457899999999743221 246799999999999999999999875444  5899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccC
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~  347 (374)
                      |+|||++..+++++||++.+++.....
T Consensus        88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~  114 (138)
T cd08408          88 FSVYNKRKMKRKEMIGWFSLGLNSSGE  114 (138)
T ss_pred             EEEEECCCCCCCcEEEEEEECCcCCCc
Confidence            999999988889999999999987654

Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle

>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin

Probab=99.53  E-value=1.8e-14  Score=121.95  Aligned_cols=112  Identities=20%  Similarity=0.189  Sum_probs=89.0

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC--ccEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe--la~Lrf~  322 (374)
                      ..|.|+|++|++|+..      +..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+.  ...|+|.
T Consensus        14 ~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~   87 (134)
T cd00276          14 ERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT   87 (134)
T ss_pred             CEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence            5799999999998642      2345689999999986544445679999999999999999999987654  3689999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCcc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERY  362 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~  362 (374)
                      |||.+..+++++||++.+++++...+. .|.+|++..|+++
T Consensus        88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~  128 (134)
T cd00276          88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI  128 (134)
T ss_pred             EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence            999998778999999999999933333 3557777766654

Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin

>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP)

Probab=99.53  E-value=6.7e-14  Score=120.79  Aligned_cols=91  Identities=30%  Similarity=0.434  Sum_probs=77.9

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      +.|+|+|++|.+|+.      .+. +.+||||+|.+.+     .+.||++++++.||+|||+|.|.+..+ ...|.|+||
T Consensus         2 G~L~V~Vi~a~nL~~------~d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~   68 (145)
T cd04038           2 GLLKVRVVRGTNLAV------RDF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF   68 (145)
T ss_pred             eEEEEEEEeeECCCC------CCC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence            468999999999863      122 5689999999853     578999999999999999999999776 567999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |++..+++++||++.+++..|..+
T Consensus        69 D~d~~~~dd~iG~a~i~l~~l~~~   92 (145)
T cd04038          69 DKDTFSKDDSMGEAEIDLEPLVEA   92 (145)
T ss_pred             ECCCCCCCCEEEEEEEEHHHhhhh
Confidence            999888899999999999988654

ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i

>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1)

Probab=99.50  E-value=3.8e-13  Score=114.98  Aligned_cols=94  Identities=21%  Similarity=0.326  Sum_probs=75.3

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC--------CceeeeeeeccCCCCCcc-CcEEEEEeecCCc
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL  316 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~--------d~~k~kTk~v~~~~nP~W-ne~f~F~v~~pel  316 (374)
                      .++|++++|++|+.       +.++.+||||+|.+.+...        +..++||++++++.||+| ||+|.|.+...  
T Consensus         2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~--   72 (137)
T cd08691           2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT--   72 (137)
T ss_pred             EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--
Confidence            36899999999842       3357899999999974322        234789999999999999 99999998533  


Q ss_pred             cEEEEEEEeeCCCCC---CCccEEEEEECccccCc
Q 017257          317 ALLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG  348 (374)
Q Consensus       317 a~Lrf~V~D~d~~~~---dd~iG~~~ipl~~L~~G  348 (374)
                      ..|.|+|||++..++   +++||++.+|+++|..|
T Consensus        73 ~~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~  107 (137)
T cd08691          73 DVLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLER  107 (137)
T ss_pred             CEEEEEEEecCCCCCccCCceEEEEEEEHHHhccc
Confidence            479999999875433   69999999999999755

NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C

>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs)

Probab=99.50  E-value=1.6e-13  Score=117.29  Aligned_cols=104  Identities=29%  Similarity=0.355  Sum_probs=84.4

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC------------
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------  314 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p------------  314 (374)
                      |+|+|+.|++|+..       ..+..||||+|.+.+. ....+++|+++.++.||.|||+|.|.+...            
T Consensus         1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~~-~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~   72 (137)
T cd08675           1 LSVRVLECRDLALK-------SNGTCDPFARVTLNYS-SKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE   72 (137)
T ss_pred             CEEEEEEccCCCcc-------cCCCCCcEEEEEEecC-CcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence            57999999998531       2356899999998752 334678999999999999999999998754            


Q ss_pred             ---CccEEEEEEEeeCCCCCCCccEEEEEECccccCc---ceEEEccCCC
Q 017257          315 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK  358 (374)
Q Consensus       315 ---ela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~  358 (374)
                         .-..|.|.|||++..++++|||++.+++..+..+   .+|.+|....
T Consensus        73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~  122 (137)
T cd08675          73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE  122 (137)
T ss_pred             ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence               3457999999999877899999999999998654   4678886553

RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin

>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein

Probab=99.50  E-value=1.4e-13  Score=113.78  Aligned_cols=92  Identities=26%  Similarity=0.360  Sum_probs=71.8

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |.|+|.+|++|.           +..||||++++.+......+.||++++++.||+|||+|.|.+..  ...|+|.|||+
T Consensus         1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~   67 (118)
T cd08686           1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK   67 (118)
T ss_pred             CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence            579999999983           23799999998753322457899999999999999999999863  44899999998


Q ss_pred             -------CCCCCCCccEEEEEECc--ccc-CcceE
Q 017257          327 -------DMSEKDDFGGQTCLPVS--ELK-QGIRA  351 (374)
Q Consensus       327 -------d~~~~dd~iG~~~ipl~--~L~-~GyR~  351 (374)
                             |..+.|+++|.+.+.|+  .+. .|+.-
T Consensus        68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~  102 (118)
T cd08686          68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE  102 (118)
T ss_pred             ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence                   45577999988777765  443 36643

The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr

>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family

Probab=99.48  E-value=5.5e-13  Score=114.85  Aligned_cols=115  Identities=17%  Similarity=0.313  Sum_probs=93.1

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ...|.|.|+.|++|+.           ..+|||+|.+.|    ....||+++.++.||.|+|.|.|....+ ..-|.|.|
T Consensus        10 ~~sL~v~V~EAk~Lp~-----------~~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v   73 (146)
T cd04013          10 ENSLKLWIIEAKGLPP-----------KKRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL   73 (146)
T ss_pred             EEEEEEEEEEccCCCC-----------cCCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence            3569999999999963           127899999986    2346999999999999999999976443 56689999


Q ss_pred             EeeCC-CC---CCCccEEEEEECccccCcc---eEEEccCCCCCc--------cCCeEEEEEEEEC
Q 017257          324 HEYDM-SE---KDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEFI  374 (374)
Q Consensus       324 ~D~d~-~~---~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~--------~~~~~L~v~i~f~  374 (374)
                      +..+. .+   ++++||.+.||+..|..|.   +|.||.+.+|.+        ..+++|-|+++|.
T Consensus        74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~  139 (146)
T cd04013          74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQ  139 (146)
T ss_pred             EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEE
Confidence            75442 22   4789999999999999874   799999999886        4668999999884

SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas

>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins

Probab=99.48  E-value=2.6e-13  Score=113.65  Aligned_cols=93  Identities=22%  Similarity=0.299  Sum_probs=75.4

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|.|+|+.|++++.    +     +..||||+|.+.+     .+.+|++++++ ||.|||+|.|.+..++.. |.|.|||
T Consensus         3 ~L~V~Vv~Ar~L~~----~-----~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~d   66 (127)
T cd08394           3 LLCVLVKKAKLDGA----P-----DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELWN   66 (127)
T ss_pred             eEEEEEEEeeCCCC----C-----CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEEe
Confidence            68999999999842    1     1348999999953     57789988775 999999999999766555 9999999


Q ss_pred             eCCCCCCCccEEEEEECccccCc-----ceEEEcc
Q 017257          326 YDMSEKDDFGGQTCLPVSELKQG-----IRAVPLH  355 (374)
Q Consensus       326 ~d~~~~dd~iG~~~ipl~~L~~G-----yR~vpL~  355 (374)
                      +|.. .|||+|++.|||+.+..+     -.|++|.
T Consensus        67 kd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~  100 (127)
T cd08394          67 KGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD  100 (127)
T ss_pred             CCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence            9965 699999999999998744     2466764

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi

>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins

Probab=99.48  E-value=2.2e-13  Score=113.87  Aligned_cols=92  Identities=25%  Similarity=0.418  Sum_probs=77.7

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEe
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE  325 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D  325 (374)
                      .|+|+|++|++++.      .+..+.+||||+|.+.+    ....+|+++.++.||.|||+|.|.+..+. ..|+|+|||
T Consensus         2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d   70 (120)
T cd04045           2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD   70 (120)
T ss_pred             eEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence            58899999999853      23356789999999854    24678999999999999999999886654 689999999


Q ss_pred             eCCCCCCCccEEEEEECccccCc
Q 017257          326 YDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       326 ~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      ++..+++++||++.+++.++..+
T Consensus        71 ~~~~~~d~~IG~~~~~l~~l~~~   93 (120)
T cd04045          71 YEKVGKDRSLGSVEINVSDLIKK   93 (120)
T ss_pred             CCCCCCCCeeeEEEEeHHHhhCC
Confidence            99888899999999999998765

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene

Probab=99.48  E-value=2.7e-13  Score=113.58  Aligned_cols=91  Identities=25%  Similarity=0.368  Sum_probs=75.8

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCC---ccEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLRI  321 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pe---la~Lrf  321 (374)
                      .|.|+|++|++|+.      .+..+.+||||+|.+.+     ..++|+++.+ +.||+|||+|.|.+..+.   ...|.|
T Consensus         2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v   70 (124)
T cd04049           2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL   70 (124)
T ss_pred             eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence            58999999999853      23346789999999854     4568888875 789999999999998773   467999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~  347 (374)
                      .|||.+..+++++||++.+++.++..
T Consensus        71 ~V~d~~~~~~d~~iG~~~i~l~~l~~   96 (124)
T cd04049          71 RIMDKDNFSDDDFIGEATIHLKGLFE   96 (124)
T ss_pred             EEEECccCCCCCeEEEEEEEhHHhhh
Confidence            99999988789999999999999854

In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai

>PLN03008 Phospholipase D delta

Probab=99.48  E-value=3.5e-13  Score=141.56  Aligned_cols=99  Identities=22%  Similarity=0.445  Sum_probs=86.9

Q ss_pred             CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257          270 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       270 s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      ..+||||+|.+.+    ....||++++++.||+|||+|.|.+..+. +.|.|+|+|+|.++ +++||++.|||.+|..|.
T Consensus        75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge  148 (868)
T PLN03008         75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE  148 (868)
T ss_pred             CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence            4679999999943    33569999999999999999999998764 58999999999887 699999999999999996


Q ss_pred             ---eEEEccCCCCCccC-CeEEEEEEEEC
Q 017257          350 ---RAVPLHDRKGERYK-SVKLLMHFEFI  374 (374)
Q Consensus       350 ---R~vpL~d~~g~~~~-~~~L~v~i~f~  374 (374)
                         +|++|.+..|++.. ++.|.|.++|+
T Consensus       149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~  177 (868)
T PLN03008        149 RISGWFPVLGASGKPPKAETAIFIDMKFT  177 (868)
T ss_pred             ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence               68999999999985 47999999985

>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins

Probab=99.46  E-value=5.7e-13  Score=115.89  Aligned_cols=95  Identities=29%  Similarity=0.436  Sum_probs=76.8

Q ss_pred             CcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC------------------------CceeeeeeeccC
Q 017257          242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA------------------------DTVMKKTKTLED  297 (374)
Q Consensus       242 ~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~------------------------d~~k~kTk~v~~  297 (374)
                      |....|+|+|++|++|+.      .+..+.+||||+|.+.....                        ....++|+++.+
T Consensus        25 ~~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~   98 (153)
T cd08676          25 PPIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQ   98 (153)
T ss_pred             CCeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecC
Confidence            345789999999999853      24456789999999853211                        112468999999


Q ss_pred             CCCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECcccc
Q 017257          298 NWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       298 ~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      +.||.|||+|.|.+..+....|.|+|||++    ++|||++.++++.|.
T Consensus        99 tlnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~  143 (153)
T cd08676          99 TLNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLP  143 (153)
T ss_pred             CCCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhC
Confidence            999999999999997655678999999987    789999999999987

C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy

>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs)

Probab=99.44  E-value=1.9e-12  Score=106.94  Aligned_cols=113  Identities=21%  Similarity=0.304  Sum_probs=83.1

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEEEE
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH  324 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~V~  324 (374)
                      |+|+|+.|.+|+.    .     +.+||||.|.+.+    ...++|+++++ .||.|||+|.|.+...++  ..|.|.||
T Consensus         2 L~v~vi~a~~l~~----~-----~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~   67 (117)
T cd08383           2 LRLRILEAKNLPS----K-----GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK   67 (117)
T ss_pred             eEEEEEEecCCCc----C-----CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence            7899999999863    1     4579999999965    23478999988 999999999999876554  35677788


Q ss_pred             eeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.+...++.++|.+.+....+..+. .|.+|....+.....+.|.+.+.|
T Consensus        68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~  117 (117)
T cd08383          68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY  117 (117)
T ss_pred             ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence            8775555667776555544443333 478998766655556689888876

RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2

>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase

Probab=99.44  E-value=1.5e-12  Score=109.56  Aligned_cols=114  Identities=23%  Similarity=0.306  Sum_probs=84.3

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|.|+|++|+.+.     .  +..+.+||||+|.+.+.    ...+|++++++.||+|||+|.|.+.  +...|.|+||
T Consensus         2 ~~L~V~i~~a~l~~-----~--~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~   68 (125)
T cd04021           2 SQLQITVESAKLKS-----N--SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW   68 (125)
T ss_pred             ceEEEEEEeeECCC-----C--CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence            36899999998332     1  22456899999998652    3679999999999999999999874  3468999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc-------c-eEEEccCCC-CCccCCeEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG-------I-RAVPLHDRK-GERYKSVKLLMHF  371 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G-------y-R~vpL~d~~-g~~~~~~~L~v~i  371 (374)
                      |++..+.+++||++.++|+.+..+       + -+++|.... +.-...+.|.+.+
T Consensus        69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~  124 (125)
T cd04021          69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL  124 (125)
T ss_pred             eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence            999888899999999999998642       1 256665433 1112344666654

E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e

>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins

Probab=99.43  E-value=1.1e-12  Score=107.87  Aligned_cols=96  Identities=18%  Similarity=0.253  Sum_probs=78.4

Q ss_pred             CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECcccc-
Q 017257          268 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK-  346 (374)
Q Consensus       268 ~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~-  346 (374)
                      ..+.+||||+|.+.+    ...++|++++++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.++|+.+. 
T Consensus         9 ~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~~   83 (111)
T cd04052           9 KTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLID   83 (111)
T ss_pred             cCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHHh
Confidence            456789999999964    2457899988899999999999998766557799999999987 7999999999999873 


Q ss_pred             C---cceEEEccCCCCCccCCeEEEEEEEE
Q 017257          347 Q---GIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       347 ~---GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      .   +.+|.+|.+     .+.+.|.++++|
T Consensus        84 ~~~~~~~w~~L~~-----~~~G~i~~~~~~  108 (111)
T cd04052          84 ATSVGQQWFPLSG-----NGQGRIRISALW  108 (111)
T ss_pred             hhhccceeEECCC-----CCCCEEEEEEEE
Confidence            2   357888865     235688888877

5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.

>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking

Probab=99.43  E-value=5e-13  Score=102.97  Aligned_cols=85  Identities=38%  Similarity=0.550  Sum_probs=73.4

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|+|++|++|+..      +..+.+||||+|.+.+...  ..++|+++.++.+|.|||+|.|.+..++.+.|.|.|||+
T Consensus         1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~   72 (85)
T PF00168_consen    1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK   72 (85)
T ss_dssp             EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred             CEEEEEEEECCCCc------ccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence            78999999999642      2344679999999987554  568999999999999999999999888888899999999


Q ss_pred             CCCCCCCccEEEE
Q 017257          327 DMSEKDDFGGQTC  339 (374)
Q Consensus       327 d~~~~dd~iG~~~  339 (374)
                      +..+++++||+++
T Consensus        73 ~~~~~~~~iG~~~   85 (85)
T PF00168_consen   73 DSFGKDELIGEVK   85 (85)
T ss_dssp             TSSSSEEEEEEEE
T ss_pred             CCCCCCCEEEEEC
Confidence            9888899999975

C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....

>cd04047 C2B_Copine C2 domain second repeat in Copine

Probab=99.39  E-value=2.6e-12  Score=105.27  Aligned_cols=92  Identities=22%  Similarity=0.350  Sum_probs=71.7

Q ss_pred             EEEeccccccCCCCCcccCCCCCCceEEEEEecCC-CCceeeeeeeccCCCCCccCcEEEEEee---cCC-ccEEEEEEE
Q 017257          250 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEVH  324 (374)
Q Consensus       250 ~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~-~d~~k~kTk~v~~~~nP~Wne~f~F~v~---~pe-la~Lrf~V~  324 (374)
                      -.++|++|+.      .+..+.+||||+|.+.+.. .....+||++++++.||+|| +|.|.+.   ..+ ...|+|+||
T Consensus         5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~   77 (110)
T cd04047           5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY   77 (110)
T ss_pred             EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence            3568888853      2445678999999987532 12346899999999999999 6777643   222 468999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |++..+++++||++.++++.|..+
T Consensus        78 d~d~~~~d~~iG~~~~~l~~l~~~  101 (110)
T cd04047          78 DYDSSGKHDLIGEFETTLDELLKS  101 (110)
T ss_pred             EeCCCCCCcEEEEEEEEHHHHhcC
Confidence            999888899999999999999854

There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=5.7e-13  Score=129.25  Aligned_cols=96  Identities=30%  Similarity=0.494  Sum_probs=83.2

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V  323 (374)
                      ..|+|+|..|.+|-.      .|.++-+||||++.+...+....++||++++.++||+|||+|.|.+...+. ..|.++|
T Consensus       180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv  253 (683)
T KOG0696|consen  180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV  253 (683)
T ss_pred             ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence            357888888888742      355677899999999988888889999999999999999999999865443 5789999


Q ss_pred             EeeCCCCCCCccEEEEEECcccc
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      ||+|..+++||.|...+-+++|.
T Consensus       254 WDWDrTsRNDFMGslSFgisEl~  276 (683)
T KOG0696|consen  254 WDWDRTSRNDFMGSLSFGISELQ  276 (683)
T ss_pred             ecccccccccccceecccHHHHh
Confidence            99999999999999999999885

>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.32  E-value=1.3e-11  Score=124.07  Aligned_cols=121  Identities=23%  Similarity=0.301  Sum_probs=92.7

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|+.|.+|+..      +..+..||||++++..  ....+.+|+++++++||+|||+|.|.|...++  ..|.|+
T Consensus       167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~  238 (421)
T KOG1028|consen  167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS  238 (421)
T ss_pred             CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence            5689999999999742      2234689999999974  44678899999999999999999999766554  579999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccC-CeEEEEEEEE
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEF  373 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~-~~~L~v~i~f  373 (374)
                      |||+|.++++++||++.+||..+....   .|.+|....-..-. .+-|++.+.|
T Consensus       239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y  293 (421)
T KOG1028|consen  239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY  293 (421)
T ss_pred             EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence            999999999999999999999887655   36666543111111 1356665544

>smart00239 C2 Protein kinase C conserved region 2 (CalB)

Probab=99.31  E-value=2e-11  Score=96.12  Aligned_cols=99  Identities=38%  Similarity=0.556  Sum_probs=81.2

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |.|+|+.|+++...      ......+|||++.+.+..  ....+|+++.++.||.||++|.|.+..+....|.|+|||.
T Consensus         2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~   73 (101)
T smart00239        2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK   73 (101)
T ss_pred             eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence            68999999998531      122457999999997532  3468899999889999999999998776567899999999


Q ss_pred             CCCCCCCccEEEEEECccccCcceEEE
Q 017257          327 DMSEKDDFGGQTCLPVSELKQGIRAVP  353 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~GyR~vp  353 (374)
                      +..+.+.++|++.+++..+..|+++.+
T Consensus        74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~  100 (101)
T smart00239       74 DRFGRDDFIGQVTIPLSDLLLGGRHEK  100 (101)
T ss_pred             CCccCCceeEEEEEEHHHcccCccccC
Confidence            876678999999999999999887643

Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.

>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin

Probab=99.22  E-value=6.8e-11  Score=100.19  Aligned_cols=97  Identities=24%  Similarity=0.257  Sum_probs=78.5

Q ss_pred             EEEEEEeccccccCCCCCcccCCC--CCCceEEEEEecCCCCceeeeeeeccCCCC--CccCcEEEEEeec---------
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYS--PPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV---------  313 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s--~~DpyV~V~i~g~~~d~~k~kTk~v~~~~n--P~Wne~f~F~v~~---------  313 (374)
                      |+|.|..+++++...    .+..+  ..||||++.+.+.  ...+++|.++.++.|  |.||+.|.|.+..         
T Consensus         2 LRViIw~~~~v~~~~----~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~   75 (133)
T cd08374           2 LRVIVWNTRDVLNDD----TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV   75 (133)
T ss_pred             EEEEEEECcCCcccc----cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence            789999999865421    11122  4899999999875  346789999999887  9999999998765         


Q ss_pred             ------------CCc--cEEEEEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257          314 ------------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       314 ------------pel--a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                                  .++  ..|.++|||+|..++|++||+..++|..|.+|.
T Consensus        76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~  125 (133)
T cd08374          76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA  125 (133)
T ss_pred             EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence                        122  578999999999999999999999999998775

Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>PLN03200 cellulose synthase-interactive protein; Provisional

Probab=99.17  E-value=9.7e-11  Score=133.59  Aligned_cols=114  Identities=16%  Similarity=0.314  Sum_probs=91.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE  322 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~  322 (374)
                      .+.|+|+|+.|+++.        +.++..||||.|.+..    ..++||+++++|.||+|||+|+|.+..|.. ..|.|+
T Consensus      1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200       1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred             CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence            467999999999984        2245689999999873    236799999999999999999999988764 459999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcce---EEEccC---CCCCccCCeEEEEEEEE
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD---RKGERYKSVKLLMHFEF  373 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d---~~g~~~~~~~L~v~i~f  373 (374)
                      |||+|.++ ++.+|.+.|++.++-.+-+   +.+|.+   +.|.+   -+|-|+|+|
T Consensus      2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200       2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred             EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence            99999886 5699999999999876544   578875   34442   368888887

>PLN02270 phospholipase D alpha

Probab=99.13  E-value=4.6e-10  Score=118.27  Aligned_cols=124  Identities=19%  Similarity=0.279  Sum_probs=99.7

Q ss_pred             eEEEEEEEeccccccC-C-----------CCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEe
Q 017257          245 KTLKVTVYMGEGWYYD-F-----------PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPL  311 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~-~-----------~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v  311 (374)
                      .+|.|+|+.|.+|+.. .           ..+-......+||||.|.+.+    ..-.||+++.|. .||+|||+|...+
T Consensus         8 g~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~~   83 (808)
T PLN02270          8 GTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIYC   83 (808)
T ss_pred             cceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEee
Confidence            5789999999988631 0           000000123569999999986    345799999886 6999999999998


Q ss_pred             ecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCccC-CeEEEEEEEEC
Q 017257          312 SVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI  374 (374)
Q Consensus       312 ~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~-~~~L~v~i~f~  374 (374)
                      ..+. +-|.|+|+|.|.++ ..+||.+.||+..|-.|-   +|+|+++.+|+++. ++.|-|.++|+
T Consensus        84 ah~~-~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~  148 (808)
T PLN02270         84 AHMA-SNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF  148 (808)
T ss_pred             ccCc-ceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence            7764 77999999999887 679999999999999884   78999999999984 58999999985

>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.12  E-value=4.9e-10  Score=112.70  Aligned_cols=175  Identities=20%  Similarity=0.245  Sum_probs=119.0

Q ss_pred             cceeeee--cCC-----cccCCCCCCccccccccceee-eec-cccCCcceeee-eeecccccceeeeecCCCcccCCCC
Q 017257          162 RNLLRIY--PKG-----IRVDSSNYNPLIGWSHGAQMV-AFN-MQGHGRSLWLM-HGMFRANGGCGYVKKPNFLLQTGPH  231 (374)
Q Consensus       162 ~~l~RvY--P~g-----~R~~SSN~~P~~~W~~G~Qmv-AlN-~Qt~d~~m~ln-~~~F~~ng~~GYVLKP~~lr~~~~~  231 (374)
                      .--+++|  |.-     ||+.--..||.  |+..-.+- +.+ .|+.-+.+.+. ..+|..|+--|.|.=|-...+....
T Consensus       189 dpyVK~~llPdk~~k~kT~v~r~tlnP~--fnEtf~f~v~~~~l~~~~L~l~V~~~drfsr~~~iGev~~~l~~~~~~~~  266 (421)
T KOG1028|consen  189 DPYVKVYLLPDKKGKFKTRVHRKTLNPV--FNETFRFEVPYEELSNRVLHLSVYDFDRFSRHDFIGEVILPLGEVDLLST  266 (421)
T ss_pred             CCeeEEEEcCCCCCcceeeeeecCcCCc--cccceEeecCHHHhccCEEEEEEEecCCcccccEEEEEEecCcccccccc
Confidence            4456666  433     56667777776  45554443 333 44555555554 3789999999999888222221110


Q ss_pred             Cc----ccCC------CC--------CCCcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeee
Q 017257          232 NE----VFDP------KV--------KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTK  293 (374)
Q Consensus       232 ~~----~f~p------~~--------~~~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk  293 (374)
                      ..    ...+      ..        -+|....|+|.|+.|++|+.      .+..+..||||++.+........++||.
T Consensus       267 ~~~w~~l~~~~~~~~~~~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~  340 (421)
T KOG1028|consen  267 TLFWKDLQPSSTDSEELAGELLLSLCYLPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTS  340 (421)
T ss_pred             ceeeeccccccCCcccccceEEEEEEeecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeee
Confidence            00    0000      00        12345679999999999963      3445678999999998544445577899


Q ss_pred             eccCCCCCccCcEEEEEeecCCc--cEEEEEEEeeCCCCCCCccEEEEEECcc
Q 017257          294 TLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSE  344 (374)
Q Consensus       294 ~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~V~D~d~~~~dd~iG~~~ipl~~  344 (374)
                      +.+++.||+|||+|.|.|....+  +.|.++|||+|..+++++||++++....
T Consensus       341 ~~~~~~npv~nesf~F~vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~  393 (421)
T KOG1028|consen  341 VKKKTLNPVFNETFVFDVPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDS  393 (421)
T ss_pred             cccCCCCCcccccEEEeCCHHHhheeEEEEEEEEcccccccceeeEEEecCCC
Confidence            99999999999999998865444  5699999999999999999988887766

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.09  E-value=1.9e-10  Score=116.05  Aligned_cols=115  Identities=25%  Similarity=0.396  Sum_probs=84.3

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..++++|++||+|..      .|..+..||||.+++.     +.++||+++..++||+|||.|.|.+.+.. ..|.+.||
T Consensus       295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechnst-drikvrvw  362 (1283)
T KOG1011|consen  295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNST-DRIKVRVW  362 (1283)
T ss_pred             eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCCC-ceeEEEEe
Confidence            458899999999853      3445678999999986     46889999999999999999999997653 56899999


Q ss_pred             eeCCC-----------CCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEE
Q 017257          325 EYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF  371 (374)
Q Consensus       325 D~d~~-----------~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i  371 (374)
                      |.|..           ..|||+||+.|-+..|...- -|..|--+..+...++.+-+||
T Consensus       363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhi  421 (1283)
T KOG1011|consen  363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI  421 (1283)
T ss_pred             cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEE
Confidence            98753           35899999999998875321 2334433333333333344444

>cd00030 C2 C2 domain

Probab=99.08  E-value=1e-09  Score=85.73  Aligned_cols=90  Identities=39%  Similarity=0.570  Sum_probs=74.1

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |.|.|++|+++...      ......+|||.+.+.+    ....+|.++.++.||.||+.|.|.+.......|.|.|++.
T Consensus         1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~   70 (102)
T cd00030           1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK   70 (102)
T ss_pred             CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence            46899999988542      1234689999999975    3567899998889999999999998764456799999998


Q ss_pred             CCCCCCCccEEEEEECcccc
Q 017257          327 DMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~  346 (374)
                      +....+.++|++.+++..+.
T Consensus        71 ~~~~~~~~ig~~~~~l~~l~   90 (102)
T cd00030          71 DRFSKDDFLGEVEIPLSELL   90 (102)
T ss_pred             CCCCCCceeEEEEEeHHHhh
Confidence            87766899999999999987

The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.

>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]

Probab=98.88  E-value=6.7e-09  Score=111.59  Aligned_cols=103  Identities=26%  Similarity=0.405  Sum_probs=87.7

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|+|.+++|++|+.      .+..+-.||||++.+.+    +.-+||++++.|+||+|||+|..+|.+-....+.+.|+
T Consensus      1040 G~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v~ 1109 (1227)
T COG5038        1040 GYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINVN 1109 (1227)
T ss_pred             CcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEEe
Confidence            458899999999863      35566689999999976    34689999999999999999999998877788999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCcce---EEEccCC
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDR  357 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~  357 (374)
                      |+|...+++.||++.++|..|.+|.-   .|||-.+
T Consensus      1110 Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk 1145 (1227)
T COG5038        1110 DWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGK 1145 (1227)
T ss_pred             ecccCCCccccccccccHhhcCcCCccceeeeccCc
Confidence            99999999999999999999998853   4676433

>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.68  E-value=7e-09  Score=106.24  Aligned_cols=96  Identities=24%  Similarity=0.373  Sum_probs=76.9

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC--CceeeeeeeccCCCCCccCcEEEEEeec----CCccE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELAL  318 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~--d~~k~kTk~v~~~~nP~Wne~f~F~v~~----pela~  318 (374)
                      .+|.|.|+.|.++-.      .|.++-+||||.|++..-..  -...+||++++.++||+|+|+|+|.|..    .+-|+
T Consensus       947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen  947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred             cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence            457788888887632      35567889999999864111  1335799999999999999999999863    24689


Q ss_pred             EEEEEEeeCCCCCCCccEEEEEECcccc
Q 017257          319 LRIEVHEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       319 Lrf~V~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      |.|+|.|+|..+.+||.|++.+-|..+.
T Consensus      1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~vp 1048 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDVP 1048 (1103)
T ss_pred             EEEEeeccceecccccchHHHHhhCCCC
Confidence            9999999999888999999999888763

>PLN02352 phospholipase D epsilon

Probab=98.67  E-value=1.6e-07  Score=99.04  Aligned_cols=118  Identities=19%  Similarity=0.266  Sum_probs=89.4

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ..+|.++|+.|..+...... ........||||.|.+.+.    .-.||   .+.-||+|||+|...+..+..+-|.|+|
T Consensus         9 hg~l~~~i~~~~~~~~~~~~-~~~~~~~~~~y~tv~~~~~----~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v   80 (758)
T PLN02352          9 HGTLEATIFDATPYTPPFPF-NCIFLNGKATYVTIKIGNK----KVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL   80 (758)
T ss_pred             ccceEEEEEEeeehhhcccc-cccccCCCCceEEEEeCCc----EEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence            36789999999733211110 0001122399999999762    34567   4446999999999998876546799999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcc----eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy----R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      +|     ...+||.+.||+..|-.|-    +|+|+++.+|+++.+++|-|+++|+
T Consensus        81 k~-----~~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  130 (758)
T PLN02352         81 KT-----KCSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR  130 (758)
T ss_pred             ec-----CCeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence            98     2579999999999999883    5899999999999889999999985

>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae

Probab=98.33  E-value=9.6e-07  Score=71.23  Aligned_cols=89  Identities=18%  Similarity=0.207  Sum_probs=64.2

Q ss_pred             EEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEee
Q 017257          247 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY  326 (374)
Q Consensus       247 L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~  326 (374)
                      |+|+|.+++++...   ......+.+||||.|.+.+    ..+.||++.   -||.|||+|.|+|.  ...-+.+.|||.
T Consensus         1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk   68 (109)
T cd08689           1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK   68 (109)
T ss_pred             CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence            57889999887431   1011345689999999875    457788874   69999999999994  345789999997


Q ss_pred             CCCCCCCccEEEEEECccccCc
Q 017257          327 DMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      .. ...-.||..-++++.|..-
T Consensus        69 ~~-~~~~Pi~llW~~~sdi~Ee   89 (109)
T cd08689          69 GG-DQPVPVGLLWLRLSDIAEE   89 (109)
T ss_pred             CC-CeecceeeehhhHHHHHHH
Confidence            53 2345788888888776543

This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that

>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]

Probab=98.33  E-value=2.7e-06  Score=91.99  Aligned_cols=94  Identities=23%  Similarity=0.328  Sum_probs=74.0

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      +.|.|+|.+|.++..    ...-..+.+|||+.+..++    ....||++++|++||+|||+|-..+..-+ .-|.++||
T Consensus       436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~~-d~L~Lsly  506 (1227)
T COG5038         436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSFT-DPLNLSLY  506 (1227)
T ss_pred             EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEecccC-CceeEEEE
Confidence            468899999998843    2112456789999999765    33459999999999999999988775221 35899999


Q ss_pred             eeCCCCCCCccEEEEEECccccC
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~  347 (374)
                      |.+....|..+|.+.++|..|.+
T Consensus       507 D~n~~~sd~vvG~~~l~L~~L~~  529 (1227)
T COG5038         507 DFNSFKSDKVVGSTQLDLALLHQ  529 (1227)
T ss_pred             eccccCCcceeeeEEechHHhhh
Confidence            98777789999999999998863

>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]

Probab=98.17  E-value=6.8e-06  Score=84.75  Aligned_cols=105  Identities=24%  Similarity=0.345  Sum_probs=81.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|.|+|..|++|+.      .+..+..|||+.|.+..    +...||.+|..++.|.|.|+|.|.|. +....|.|-||
T Consensus         5 ~sl~vki~E~knL~~------~~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP-~~F~~l~fYv~   73 (800)
T KOG2059|consen    5 QSLKVKIGEAKNLPS------YGPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIP-RTFRYLSFYVW   73 (800)
T ss_pred             cceeEEEeecccCCC------CCCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecC-cceeeEEEEEe
Confidence            458999999999974      23445689999999864    45679999999999999999999874 34567999999


Q ss_pred             eeCCCCCCCccEEEEEECcccc--Ccc-eEEEc--cCCCCCc
Q 017257          325 EYDMSEKDDFGGQTCLPVSELK--QGI-RAVPL--HDRKGER  361 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~--~Gy-R~vpL--~d~~g~~  361 (374)
                      |.| .++|+.||.++|.-..|.  +|. .|..|  .|.+.+.
T Consensus        74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEV  114 (800)
T KOG2059|consen   74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEV  114 (800)
T ss_pred             ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhh
Confidence            999 788999999999877664  343 23444  3555554

>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]

Probab=98.16  E-value=5.7e-07  Score=93.45  Aligned_cols=39  Identities=31%  Similarity=0.600  Sum_probs=35.5

Q ss_pred             hHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCch
Q 017257            2 VTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKE   40 (374)
Q Consensus         2 l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~   40 (374)
                      ++++|||+|++.|. -..++||||.|||+|||||.||++.
T Consensus       418 ~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~  457 (1267)
T KOG1264|consen  418 FKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPP  457 (1267)
T ss_pred             HHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCc
Confidence            68999999999884 5589999999999999999999975

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.11  E-value=1e-05  Score=82.65  Aligned_cols=103  Identities=28%  Similarity=0.399  Sum_probs=82.2

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCC-C-ceeeeeeeccCCCCCccCcEEEEEeec---CCccEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-D-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL  319 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~-d-~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~L  319 (374)
                      ..++|+|+.|.+|.+.       ..+...|||+|.|.|... | +.++.|++..||+.|.+||+|.|.+..   |+.--|
T Consensus      1125 hkvtvkvvaandlkwq-------tsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ-------TSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred             ceEEEEEEecccccch-------hccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence            4678999999988642       234567899999998543 2 345678888899999999999998863   666679


Q ss_pred             EEEEEeeCCCCCCCccEEEEEECcccc-Ccc--eEEEc
Q 017257          320 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPL  354 (374)
Q Consensus       320 rf~V~D~d~~~~dd~iG~~~ipl~~L~-~Gy--R~vpL  354 (374)
                      .|.|+|+.....|..+|.+.++|.++. .|-  .|+||
T Consensus      1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pL 1235 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPL 1235 (1283)
T ss_pred             EEeehhheeecccceeeeeeeehhhHhhcCceeEeeec
Confidence            999999998777889999999999985 353  57888

>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]

Probab=98.04  E-value=1.7e-05  Score=80.19  Aligned_cols=120  Identities=18%  Similarity=0.263  Sum_probs=89.8

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccC-cEEEEEeecCCc--cEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN-EEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wn-e~f~F~v~~pel--a~Lrf  321 (374)
                      ..|.|+|..|++||...+.     ....|.||+|.+..     ..+||.+....+||.|| +=|.|.|...++  .-|.+
T Consensus         3 gkl~vki~a~r~lpvmdka-----sd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi   72 (1169)
T KOG1031|consen    3 GKLGVKIKAARHLPVMDKA-----SDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI   72 (1169)
T ss_pred             CcceeEEEeccCCcccccc-----cccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence            4588999999999863211     23468899999864     56899999999999998 559999987666  46899


Q ss_pred             EEEeeCCCCCCCccEEEEEECcccc----------Ccc---eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELK----------QGI---RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~----------~Gy---R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      ++.|+|..+.+|-||.+.|.++-|.          .|-   -|+|++|.-...-....+.|+++.|
T Consensus        73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf  138 (1169)
T KOG1031|consen   73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF  138 (1169)
T ss_pred             EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence            9999999999999999999988663          121   4788887533322334567777654

>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]

Probab=97.99  E-value=3.1e-05  Score=79.99  Aligned_cols=76  Identities=26%  Similarity=0.418  Sum_probs=63.3

Q ss_pred             CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC---------------CccEEEEEEEe-eCCCCCCC
Q 017257          270 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD  333 (374)
Q Consensus       270 s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd  333 (374)
                      +..|||++|...|.-.... .+|++.+.+.||.|||.|.|.+..+               ++.-|++.+|+ .+....++
T Consensus       149 ~~~dp~~~v~~~g~~~~~~-~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~  227 (800)
T KOG2059|consen  149 GQCDPFARVTLCGPSKLKE-KKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV  227 (800)
T ss_pred             CCCCcceEEeecccchhhc-cccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence            4589999999987443333 7899999999999999999998766               56678999998 46666699


Q ss_pred             ccEEEEEECcccc
Q 017257          334 FGGQTCLPVSELK  346 (374)
Q Consensus       334 ~iG~~~ipl~~L~  346 (374)
                      |+|+..+|+..++
T Consensus       228 FlGevrv~v~~~~  240 (800)
T KOG2059|consen  228 FLGEVRVPVDVLR  240 (800)
T ss_pred             hceeEEeehhhhh
Confidence            9999999999987

>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]

Probab=97.96  E-value=6.2e-06  Score=88.89  Aligned_cols=96  Identities=21%  Similarity=0.236  Sum_probs=77.9

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEe-ecCC--ccEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPE--LALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v-~~pe--la~Lrf  321 (374)
                      .+|+|-|..+++|+.-      ..+..+||||+.++...|....|+||++++.+.||.|||.+.+.. ....  ...|.+
T Consensus      1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred             ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence            4677888888888531      224568999999999888888899999999999999999998872 2221  246899


Q ss_pred             EEEeeCCCCCCCccEEEEEECcccc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      +||..+....+.|+|.++|||..+.
T Consensus      1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred             eeecccceeeeeeeeeeecchhhcc
Confidence            9999988878999999999998764

>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.74  E-value=4.1e-05  Score=72.98  Aligned_cols=104  Identities=24%  Similarity=0.312  Sum_probs=75.4

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCcc--EEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV  323 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela--~Lrf~V  323 (374)
                      .|.|+++.+..+.      ..|..+-.||||++.+...-....++||.+.+++.||+||+.|.|.+..-+|+  -+.+.|
T Consensus       234 ~l~vt~iRc~~l~------ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~lsv  307 (362)
T KOG1013|consen  234 GLIVTIIRCSHLA------SSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALSV  307 (362)
T ss_pred             ceEEEEEEeeeee------ccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEee
Confidence            4677887766552      35667788999999887333334567899999999999999999999877776  477899


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCc
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER  361 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~  361 (374)
                      ||++.....+++|-...      -+||--++++..|..
T Consensus       308 gd~~~G~s~d~~GG~~~------g~~rr~~v~~h~gr~  339 (362)
T KOG1013|consen  308 GDYDIGKSNDSIGGSML------GGYRRGEVHKHWGRC  339 (362)
T ss_pred             cccCCCcCccCCCcccc------cccccchhhcCcccc
Confidence            99998767888885332      235554555555443

>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks)

Probab=97.64  E-value=0.00098  Score=58.31  Aligned_cols=102  Identities=17%  Similarity=0.179  Sum_probs=68.7

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCc-eeeeeeeccCCCCCccCcEEEEEeecCC---ccEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR  320 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~-~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lr  320 (374)
                      ..++|+|+++.++...         ...|.||++++......- ....|+.+.- -++.|||-++|+|...+   .|.|.
T Consensus         8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~   77 (158)
T cd08398           8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC   77 (158)
T ss_pred             CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence            4588999999987531         124779999876421111 1123443332 47899999999987544   48999


Q ss_pred             EEEEeeCCCC----CCCccEEEEEECc----cccCcceEEEccC
Q 017257          321 IEVHEYDMSE----KDDFGGQTCLPVS----ELKQGIRAVPLHD  356 (374)
Q Consensus       321 f~V~D~d~~~----~dd~iG~~~ipl~----~L~~GyR~vpL~d  356 (374)
                      |+||+.....    ....+|++.++|-    .|++|...+.|..
T Consensus        78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW~  121 (158)
T cd08398          78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWP  121 (158)
T ss_pred             EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEEc
Confidence            9999976421    1246999999985    5788987776653

PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c

>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks)

Probab=97.63  E-value=0.00084  Score=59.67  Aligned_cols=103  Identities=20%  Similarity=0.201  Sum_probs=70.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeec---CCccEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR  320 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lr  320 (374)
                      ..++|+|+++.++..        .....+.||++++...... +....|+.+.-+-.+.|||.+.|+|..   |-.|.|.
T Consensus         8 ~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc   79 (173)
T cd08693           8 EKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC   79 (173)
T ss_pred             CCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence            458999999998753        0123466888887631111 122345444434569999999998865   4458999


Q ss_pred             EEEEeeCCCC----------------CCCccEEEEEECc----cccCcceEEEcc
Q 017257          321 IEVHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPLH  355 (374)
Q Consensus       321 f~V~D~d~~~----------------~dd~iG~~~ipl~----~L~~GyR~vpL~  355 (374)
                      |+||+.....                ....||++.++|-    .|++|...+.|.
T Consensus        80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW  134 (173)
T cd08693          80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW  134 (173)
T ss_pred             EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence            9999975322                1368999999985    578898777775

PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty

>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks)

Probab=97.57  E-value=0.0011  Score=57.71  Aligned_cols=104  Identities=19%  Similarity=0.196  Sum_probs=69.4

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCc-eeeeeeeccCCCCCccCcEEEEEeec---CCccEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLRI  321 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~-~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lrf  321 (374)
                      .++|+|.+..+...       ......+.||++++.-..... ....|+.+....++.|||.++|++..   |-.|.|.|
T Consensus         9 ~~~i~i~~~~~~~~-------~~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i   81 (156)
T cd08380           9 NLRIKIHGITNINL-------LDSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL   81 (156)
T ss_pred             CeEEEEEeeccccc-------cCCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence            46788877776532       011235678888876322111 12233333333578999999999764   44489999


Q ss_pred             EEEeeCCCC--CCCccEEEEEECc----cccCcceEEEccC
Q 017257          322 EVHEYDMSE--KDDFGGQTCLPVS----ELKQGIRAVPLHD  356 (374)
Q Consensus       322 ~V~D~d~~~--~dd~iG~~~ipl~----~L~~GyR~vpL~d  356 (374)
                      +||+.+..+  ....||++.++|-    .|++|...+.|..
T Consensus        82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW~  122 (156)
T cd08380          82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLWP  122 (156)
T ss_pred             EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEeccC
Confidence            999976543  3579999999985    5789999888863

C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm

>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks)

Probab=97.45  E-value=0.0012  Score=58.56  Aligned_cols=113  Identities=24%  Similarity=0.220  Sum_probs=74.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeec--cCCC--CCccCcEEEEEeec---CC
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTL--EDNW--IPSWNEEFEFPLSV---PE  315 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v--~~~~--nP~Wne~f~F~v~~---pe  315 (374)
                      ...+.|+|.++.+++....      ....|.||++++.-.... +....|+..  .+.+  .+.|||.++|++..   |-
T Consensus         7 ~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr   80 (171)
T cd04012           7 TDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR   80 (171)
T ss_pred             cccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence            3458899999998864211      113577999988632111 112244432  2332  57899999999864   44


Q ss_pred             ccEEEEEEEeeCCCC---------CCCccEEEEEECc----cccCcceEEEccC-CCCCcc
Q 017257          316 LALLRIEVHEYDMSE---------KDDFGGQTCLPVS----ELKQGIRAVPLHD-RKGERY  362 (374)
Q Consensus       316 la~Lrf~V~D~d~~~---------~dd~iG~~~ipl~----~L~~GyR~vpL~d-~~g~~~  362 (374)
                      .|.|.|+||+....+         ....||++.++|-    .|++|...+.|.- ....++
T Consensus        81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~  141 (171)
T cd04012          81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPL  141 (171)
T ss_pred             hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcC
Confidence            489999999976443         3469999999985    5789999888863 333444

There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c

>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=97.44  E-value=4.6e-05  Score=78.94  Aligned_cols=67  Identities=25%  Similarity=0.508  Sum_probs=52.4

Q ss_pred             eeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCCC------------------------------------CCC
Q 017257          290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE------------------------------------KDD  333 (374)
Q Consensus       290 ~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~------------------------------------~dd  333 (374)
                      +-|.+.+.++||.|+|.|.|+|..-.-..+.+.+||+|.-.                                    .||
T Consensus       179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD  258 (1103)
T KOG1328|consen  179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD  258 (1103)
T ss_pred             hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence            34777778899999999999997655567899999987531                                    389


Q ss_pred             ccEEEEEECccccC-cc-eEEEccC
Q 017257          334 FGGQTCLPVSELKQ-GI-RAVPLHD  356 (374)
Q Consensus       334 ~iG~~~ipl~~L~~-Gy-R~vpL~d  356 (374)
                      |+|...|||.++.+ |. +|..|--
T Consensus       259 FLGciNipl~EiP~~Gld~WFkLep  283 (1103)
T KOG1328|consen  259 FLGCINIPLAEIPPDGLDQWFKLEP  283 (1103)
T ss_pred             cccccccchhcCCcchHHHHhccCc
Confidence            99999999999975 43 5555543

>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins

Probab=97.41  E-value=0.00045  Score=57.74  Aligned_cols=73  Identities=23%  Similarity=0.443  Sum_probs=55.0

Q ss_pred             CCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec---------------CCccEEEEEEEeeCCCC------
Q 017257          272 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---------------PELALLRIEVHEYDMSE------  330 (374)
Q Consensus       272 ~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~---------------pela~Lrf~V~D~d~~~------  330 (374)
                      .++||++.+.-.+.+ ..++|+++.++|-|.|+..++|.+..               -+.+-+.|+||.....+      
T Consensus        33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~  111 (143)
T cd08683          33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK  111 (143)
T ss_pred             cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence            578999998766654 45789999999999999999998641               12256889999876432      


Q ss_pred             ----CCCccEEEEEECccc
Q 017257          331 ----KDDFGGQTCLPVSEL  345 (374)
Q Consensus       331 ----~dd~iG~~~ipl~~L  345 (374)
                          +|-.+|.+.||+..|
T Consensus       112 ~~~~~DilLG~v~IPl~~L  130 (143)
T cd08683         112 IETSGDILLGTVKIPLRDL  130 (143)
T ss_pred             cCcCCcEEEEEEEeeHHHH
Confidence                344778888888776

C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc

>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]

Probab=97.32  E-value=0.00016  Score=77.36  Aligned_cols=94  Identities=19%  Similarity=0.255  Sum_probs=75.0

Q ss_pred             CcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEE
Q 017257          242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI  321 (374)
Q Consensus       242 ~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf  321 (374)
                      |+....+|-|..|.+|..      .|..+..||||.+.+.+.   ...-++..+.+++||+|++-|++....|-...+.+
T Consensus       610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v  680 (1105)
T KOG1326|consen  610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV  680 (1105)
T ss_pred             cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence            445566788888888742      355667899999998752   12245677889999999999999988887788999


Q ss_pred             EEEeeCCCCCCCccEEEEEECcc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSE  344 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~  344 (374)
                      .|+|+|..+.|+.||++.+.+..
T Consensus       681 ~vyd~D~~~~d~~iget~iDLEn  703 (1105)
T KOG1326|consen  681 EVYDHDLEAQDEKIGETTIDLEN  703 (1105)
T ss_pred             EEEEeecccccchhhceehhhhh
Confidence            99999999999999999988763

>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks)

Probab=97.29  E-value=0.0012  Score=57.96  Aligned_cols=85  Identities=19%  Similarity=0.233  Sum_probs=59.9

Q ss_pred             CCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCc---cEEEEEEEeeCCCCCCCccEEEEEECc---
Q 017257          271 PPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVS---  343 (374)
Q Consensus       271 ~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pel---a~Lrf~V~D~d~~~~dd~iG~~~ipl~---  343 (374)
                      ..|.||++++...... +....|..+.-+..+.|||-+.|+|...+|   |.|+|+||+.+..++...+|+++++|-   
T Consensus        29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~  108 (159)
T cd08397          29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD  108 (159)
T ss_pred             CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence            3577898887632111 111234433333467899999999876554   899999999876555679999999985   


Q ss_pred             -cccCcceEEEcc
Q 017257          344 -ELKQGIRAVPLH  355 (374)
Q Consensus       344 -~L~~GyR~vpL~  355 (374)
                       .|++|...+.|.
T Consensus       109 g~Lr~G~~~l~lw  121 (159)
T cd08397         109 GTLRRGRQKLRVW  121 (159)
T ss_pred             CcEecCCEEEEEE
Confidence             578898888875

PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty

>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.18  E-value=8e-05  Score=71.03  Aligned_cols=98  Identities=22%  Similarity=0.282  Sum_probs=73.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf  321 (374)
                      ..+..++..|.+|..      .+..+..||||+..+...-....+.+|++..|+.||.|||+..+.....+   .-.+|+
T Consensus        93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk  166 (362)
T KOG1013|consen   93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK  166 (362)
T ss_pred             hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence            457788888887632      34567789999988764333344578999999999999987666543322   346899


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      .|+|.+....++++||..+++..|.+-
T Consensus       167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~  193 (362)
T KOG1013|consen  167 VVCDNDKKTHNESQGQSRVSLKKLKPL  193 (362)
T ss_pred             eeccCcccccccCcccchhhhhccChh
Confidence            999999888899999999888887643

>PLN02964 phosphatidylserine decarboxylase

Probab=97.16  E-value=0.001  Score=70.07  Aligned_cols=86  Identities=22%  Similarity=0.156  Sum_probs=69.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      .....|++++|.--             -.|+|..+-..|    .+.+||.+.+++.||+||+.-.|.+...+.-+.+|.|
T Consensus        53 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  115 (644)
T PLN02964         53 SGIALLTLVGAEMK-------------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARISV  115 (644)
T ss_pred             cCeEEEEeehhhhc-------------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEEE
Confidence            35678888888621             137776555555    4679999999999999999999999877788889999


Q ss_pred             EeeCCCCCCCccEEEEEECcccc
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      ||.+..+.++++|-+.+.+..+-
T Consensus       116 ~~~~~~s~n~lv~~~e~~~t~f~  138 (644)
T PLN02964        116 FETNRLSKNTLVGYCELDLFDFV  138 (644)
T ss_pred             EecCCCCHHHhhhheeecHhhcc
Confidence            99999999999999988776653

>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks)

Probab=96.99  E-value=0.0062  Score=54.27  Aligned_cols=102  Identities=14%  Similarity=0.087  Sum_probs=64.1

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE  322 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf~  322 (374)
                      .++|+|.++.....       +.......||++.+.....-....+|.....+-++.|||-+.|+|...+   .|.|.|+
T Consensus        11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t   83 (178)
T cd08399          11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ   83 (178)
T ss_pred             CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence            47888888763211       1111234588887653111112234554444557999999999987544   4899999


Q ss_pred             EEeeCCCC----------------CCCccEEEEEECc----cccCcceEEEc
Q 017257          323 VHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPL  354 (374)
Q Consensus       323 V~D~d~~~----------------~dd~iG~~~ipl~----~L~~GyR~vpL  354 (374)
                      ||+.....                .+-.||++.+.|-    .|++|...+.+
T Consensus        84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~  135 (178)
T cd08399          84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM  135 (178)
T ss_pred             EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence            99963211                2457899999885    57889776655

PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir

>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus)

Probab=96.88  E-value=0.0017  Score=50.66  Aligned_cols=90  Identities=18%  Similarity=0.254  Sum_probs=59.8

Q ss_pred             EEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEEEEee
Q 017257          249 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEY  326 (374)
Q Consensus       249 V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~V~D~  326 (374)
                      |+|+.+.++..+.     ..+..+..||+=-+. .+. ....||.+.+...||+|.|+|.|.+...++  ..|.|.|+. 
T Consensus         3 itv~~c~d~s~~~-----~~~e~~~i~ikg~~t-l~k-pv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~-   74 (103)
T cd08684           3 ITVLKCKDLSWPS-----SCGENPTIYIKGILT-LPK-PVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT-   74 (103)
T ss_pred             EEEEEeccccccc-----ccCcCCeeEEEEEEe-cCC-CccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec-
Confidence            5677777765431     112223345542222 222 345788888888999999999999876555  356778877 


Q ss_pred             CCCCCCCccEEEEEECccccC
Q 017257          327 DMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       327 d~~~~dd~iG~~~ipl~~L~~  347 (374)
                       ...+.+.||++.+.++++-+
T Consensus        75 -~~~RKe~iG~~sL~l~s~ge   94 (103)
T cd08684          75 -QTPRKRTIGECSLSLRTLST   94 (103)
T ss_pred             -cCCccceeeEEEeecccCCH
Confidence             34568899999999988753

Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos

>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2

Probab=96.73  E-value=0.0055  Score=52.48  Aligned_cols=82  Identities=23%  Similarity=0.327  Sum_probs=54.3

Q ss_pred             ceEEEEEecCCCC-c-eeeeeeeccCC-CCCccCcEEEEEeec---CCccEEEEEEEeeCCCCCC----CccEEEEEECc
Q 017257          274 FYARVGIAGVPAD-T-VMKKTKTLEDN-WIPSWNEEFEFPLSV---PELALLRIEVHEYDMSEKD----DFGGQTCLPVS  343 (374)
Q Consensus       274 pyV~V~i~g~~~d-~-~k~kTk~v~~~-~nP~Wne~f~F~v~~---pela~Lrf~V~D~d~~~~d----d~iG~~~ipl~  343 (374)
                      .||+++|.-.... + ....|+.+.-+ .++.|||.++|+|..   |-.|.|.|+|+..+.....    ..||++.+||-
T Consensus         4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF   83 (142)
T PF00792_consen    4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF   83 (142)
T ss_dssp             EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred             EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence            3666666521111 1 12255555444 689999999999864   5558999999998755444    68999999985


Q ss_pred             ----cccCcceEEEcc
Q 017257          344 ----ELKQGIRAVPLH  355 (374)
Q Consensus       344 ----~L~~GyR~vpL~  355 (374)
                          .|++|...++|.
T Consensus        84 d~~~~L~~G~~~L~lW   99 (142)
T PF00792_consen   84 DYRGQLRQGPQKLSLW   99 (142)
T ss_dssp             -TTSBBEEEEEEEE-E
T ss_pred             CCCCcccCCCEEEEEE
Confidence                477888888775

7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....

>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins

Probab=96.43  E-value=0.0018  Score=62.80  Aligned_cols=37  Identities=24%  Similarity=0.606  Sum_probs=31.8

Q ss_pred             ChHHHhhc-cccCCCC-----CCC------CCCCChhhhccceEEecCC
Q 017257            1 MVTQTLGE-ILFTPGS-----ECL------KEFPSPESLKRRIIISTKP   37 (374)
Q Consensus         1 ~l~~~~Gd-~L~~~~~-----~~~------~~lpSPe~Lk~kiliK~K~   37 (374)
                      +++++||+ +||+|+.     ..+      ..||||++|||||||.-+.
T Consensus       161 ~i~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~  209 (324)
T cd08589         161 LIRSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP  209 (324)
T ss_pred             HHHHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence            47899999 9999974     222      7999999999999999986

This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy

>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]

Probab=95.76  E-value=0.013  Score=57.66  Aligned_cols=120  Identities=17%  Similarity=0.187  Sum_probs=85.0

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-CCc--------
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PEL--------  316 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-pel--------  316 (374)
                      .|.+.|.+|+.++.+....      -.|-||+++..-......+.||.+++++-.|.|+|.|...|.. +.+        
T Consensus       368 elel~ivrg~~~pvp~gp~------hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~f  441 (523)
T KOG3837|consen  368 ELELAIVRGQKNPVPGGPM------HLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRRF  441 (523)
T ss_pred             HhHHHHhhcccCCCCCCch------hHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHHH
Confidence            3567777888776542111      1366999987744333456789999999999999999988753 211        


Q ss_pred             --cEEEEEEEeeCCC-CCCCccEEEEEECccccCcc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257          317 --ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       317 --a~Lrf~V~D~d~~-~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                        --+.|+|+....+ .+|.++|.+.+.+.-|..-.   .+++|+|.  ..--|+.|-|++.+
T Consensus       442 kr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~DG--RK~vGGkLevKvRi  502 (523)
T KOG3837|consen  442 KRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKDG--RKAVGGKLEVKVRI  502 (523)
T ss_pred             HhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceecccc--ccccCCeeEEEEEE
Confidence              1378999987654 45789999999988886543   46799875  43457788888864

>KOG1327 consensus Copine [Signal transduction mechanisms]

Probab=94.59  E-value=0.085  Score=54.13  Aligned_cols=83  Identities=22%  Similarity=0.294  Sum_probs=65.0

Q ss_pred             eeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCC----CCCCccEEEEEECcccc-CcceEEEccCCCCCccCC
Q 017257          290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSELK-QGIRAVPLHDRKGERYKS  364 (374)
Q Consensus       290 ~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~----~~dd~iG~~~ipl~~L~-~GyR~vpL~d~~g~~~~~  364 (374)
                      .+|.++.+..||.|-++|......+....|+|.|+|-+..    ...+|+|++..-++.+- ...+.++|.-+.+..-..
T Consensus        43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~  122 (529)
T KOG1327|consen   43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS  122 (529)
T ss_pred             cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence            4899999999999999998888888888999999997643    34789999988888764 345666776666666566


Q ss_pred             eEEEEEEE
Q 017257          365 VKLLMHFE  372 (374)
Q Consensus       365 ~~L~v~i~  372 (374)
                      +++.|+++
T Consensus       123 g~iti~ae  130 (529)
T KOG1327|consen  123 GTITISAE  130 (529)
T ss_pred             ccEEEEee
Confidence            67777764

>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]

Probab=94.50  E-value=0.02  Score=55.92  Aligned_cols=106  Identities=24%  Similarity=0.256  Sum_probs=77.1

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      +..|.|.||.|.+|-..   .  ...+.++|||+|++.+...-..+.||+...++..|.+-+...|.-. |.-..|.+.|
T Consensus       268 ~g~l~vEii~ar~l~~k---~--~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~s-p~~k~Lq~tv  341 (405)
T KOG2060|consen  268 KGDLEVEIIRARGLVVK---P--GSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQS-PPGKYLQGTV  341 (405)
T ss_pred             cCceeEEEEeccccccc---C--CcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccC-CCccEEEEEE
Confidence            35789999999998642   1  1123679999999987666567889999999999988888888654 3356788999


Q ss_pred             Ee-eCCCCCCCccEEEEEECcccc----CcceEEEcc
Q 017257          324 HE-YDMSEKDDFGGQTCLPVSELK----QGIRAVPLH  355 (374)
Q Consensus       324 ~D-~d~~~~dd~iG~~~ipl~~L~----~GyR~vpL~  355 (374)
                      |- +.....+.|+|.+.+-+.+|.    .+.-|.+|+
T Consensus       342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlf  378 (405)
T KOG2060|consen  342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLF  378 (405)
T ss_pred             eccccccchHHHhhHHHHHhhhhccccccceeeeecc
Confidence            85 344455679998888887774    334455554

>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]

Probab=92.93  E-value=0.076  Score=57.66  Aligned_cols=83  Identities=20%  Similarity=0.318  Sum_probs=59.8

Q ss_pred             CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eec--------CCccEEEEEEEeeCCCCCCCccEEE
Q 017257          268 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELALLRIEVHEYDMSEKDDFGGQT  338 (374)
Q Consensus       268 ~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~--------pela~Lrf~V~D~d~~~~dd~iG~~  338 (374)
                      ..+..|||+.|...+     +.+.|.++.+++||.|+++..|. +.-        ...-.+.|+|+|.|..+.++|.|..
T Consensus       223 k~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~ppi~v~e~yd~dr~g~~ef~gr~  297 (1105)
T KOG1326|consen  223 KDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPPIRVFEVYDLDRSGINEFKGRK  297 (1105)
T ss_pred             cccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCCeEEEEeehhhhhchHHhhccc
Confidence            345679999998876     45789999999999999998885 221        1124688999999999999999975


Q ss_pred             EEECccc-c-CcceEEEcc
Q 017257          339 CLPVSEL-K-QGIRAVPLH  355 (374)
Q Consensus       339 ~ipl~~L-~-~GyR~vpL~  355 (374)
                      .....-+ . +--.++|+.
T Consensus       298 ~~~p~V~~~~p~lkw~p~~  316 (1105)
T KOG1326|consen  298 KQRPYVMVQCPALKWVPTM  316 (1105)
T ss_pred             ccceEEEecCCccceEEee
Confidence            4433322 2 234566664

>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain

Probab=92.43  E-value=0.75  Score=36.84  Aligned_cols=56  Identities=21%  Similarity=0.220  Sum_probs=36.2

Q ss_pred             CCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEEEEEEeeC
Q 017257          272 PDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIEVHEYD  327 (374)
Q Consensus       272 ~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lrf~V~D~d  327 (374)
                      .+.||++++...... +....|+.+.-...+.|||-+.|++...+   .|.|.|+||+..
T Consensus        32 ~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~i~~~~   91 (100)
T smart00142       32 SDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCITIYEVK   91 (100)
T ss_pred             ceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEEEEEee
Confidence            467999987632111 11223443332335899999999987544   489999999864

Outlier of C2 family.

>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins

Probab=92.38  E-value=0.8  Score=41.21  Aligned_cols=56  Identities=23%  Similarity=0.418  Sum_probs=37.6

Q ss_pred             ceeeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCCCCC--CccEEEEEEC
Q 017257          287 TVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD--DFGGQTCLPV  342 (374)
Q Consensus       287 ~~k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~~~d--d~iG~~~ipl  342 (374)
                      ...++|-+...+-+|.|+|++.+.|...  +-+-|+|+++......+.  ..+|-+.+||
T Consensus        52 ~se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL  111 (189)
T cd08695          52 CSEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPL  111 (189)
T ss_pred             cceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEee
Confidence            3467888888888999999998887543  347799988774422111  3455555555

Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int

>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins

Probab=91.36  E-value=2.2  Score=38.57  Aligned_cols=68  Identities=16%  Similarity=0.189  Sum_probs=48.6

Q ss_pred             eeeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCCC-C---CCccEEEEEECc-----cccCcceEEEcc
Q 017257          288 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-K---DDFGGQTCLPVS-----ELKQGIRAVPLH  355 (374)
Q Consensus       288 ~k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~iG~~~ipl~-----~L~~GyR~vpL~  355 (374)
                      ..++|-+...+-+|.|+|++...|...  .-+-|+|+++...... +   ...+|-+.+||-     -|+.|-..++++
T Consensus        53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY  131 (196)
T cd08694          53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY  131 (196)
T ss_pred             eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence            457888877778999999998887543  3478999997643211 1   246788888884     377887777775

Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen

>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []

Probab=90.75  E-value=7.7  Score=32.59  Aligned_cols=114  Identities=19%  Similarity=0.183  Sum_probs=68.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeecc-CCCCCccCcEEEEEeec---C-----C
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSV---P-----E  315 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~-~~~nP~Wne~f~F~v~~---p-----e  315 (374)
                      -.+.|+|....+++.            .+..|.|.............|.... .+..-.||++|.+.+..   .     +
T Consensus         7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~   74 (143)
T PF10358_consen    7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ   74 (143)
T ss_pred             EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence            457778877777642            1223444444321111134454433 34567899999998752   1     1


Q ss_pred             ccEEEEEEEeeCCCCCCCccEEEEEECccccCc-----ceEEEccCCCCCccCCeEEEEEEEE
Q 017257          316 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       316 la~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G-----yR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      --.+.|.|+.....++...+|.+.|.|+....-     .+.++|...   +-..|+|.|.|.+
T Consensus        75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~  134 (143)
T PF10358_consen   75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL  134 (143)
T ss_pred             eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence            236889998875333336899999999987652     234566554   4456788887765

Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).

>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A

Probab=90.43  E-value=1.1  Score=40.01  Aligned_cols=67  Identities=18%  Similarity=0.240  Sum_probs=35.5

Q ss_pred             eeeeeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCCCC-C--CccEEEEEECcc----ccCcceEEEcc
Q 017257          289 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK-D--DFGGQTCLPVSE----LKQGIRAVPLH  355 (374)
Q Consensus       289 k~kTk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~~~-d--d~iG~~~ipl~~----L~~GyR~vpL~  355 (374)
                      .+.|.+...+-+|.|+|+|.+++..+  +-.-|.|++++.....+ +  ..+|.+.+||-.    +..|...++++
T Consensus        60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~  135 (184)
T PF14429_consen   60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY  135 (184)
T ss_dssp             -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred             EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence            45677777778999999999887643  34689999998653221 1  467777777654    33444555664

>KOG1327 consensus Copine [Signal transduction mechanisms]

Probab=90.03  E-value=0.48  Score=48.81  Aligned_cols=82  Identities=22%  Similarity=0.334  Sum_probs=58.1

Q ss_pred             ccCCCCCCceEEEEEe-cCCCCceeeeeeeccCCCCCccCcE-EEE-EeecCC-ccEEEEEEEeeCCCCCCCccEEEEEE
Q 017257          266 FDAYSPPDFYARVGIA-GVPADTVMKKTKTLEDNWIPSWNEE-FEF-PLSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP  341 (374)
Q Consensus       266 ~~~~s~~DpyV~V~i~-g~~~d~~k~kTk~v~~~~nP~Wne~-f~F-~v~~pe-la~Lrf~V~D~d~~~~dd~iG~~~ip  341 (374)
                      .+.++..|||..+.=. +.......++|.+++++.||.|-.. ... .+...+ -..+.+.++|++..+++++||++..+
T Consensus       151 kd~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt  230 (529)
T KOG1327|consen  151 KDFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT  230 (529)
T ss_pred             ccccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence            3557788999876644 2222334579999999999999642 111 111112 25678999999988888999999999


Q ss_pred             CccccC
Q 017257          342 VSELKQ  347 (374)
Q Consensus       342 l~~L~~  347 (374)
                      +..++.
T Consensus       231 ~~~~~~  236 (529)
T KOG1327|consen  231 LSELQE  236 (529)
T ss_pred             HHHhcc
Confidence            999974

>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins

Probab=89.83  E-value=1.2  Score=39.64  Aligned_cols=65  Identities=18%  Similarity=0.264  Sum_probs=45.6

Q ss_pred             eeeccCCCCCccCcEEEEEeecC--CccEEEEEEEeeCCC-----CCCCccEEEEEECcc-----ccCcceEEEccC
Q 017257          292 TKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMS-----EKDDFGGQTCLPVSE-----LKQGIRAVPLHD  356 (374)
Q Consensus       292 Tk~v~~~~nP~Wne~f~F~v~~p--ela~Lrf~V~D~d~~-----~~dd~iG~~~ipl~~-----L~~GyR~vpL~d  356 (374)
                      |.++..+-+|.|+|+|...+...  +..-|.|++++.+..     .....+|.+.+||-.     ++.|...+|++-
T Consensus        56 ~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k  132 (178)
T cd08679          56 TSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYK  132 (178)
T ss_pred             EEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEe
Confidence            44444447899999998887432  346799999886532     224578888888877     677877777753

Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo

>PF15627 CEP76-C2: CEP76 C2 domain

Probab=89.16  E-value=8.5  Score=33.55  Aligned_cols=124  Identities=19%  Similarity=0.152  Sum_probs=80.3

Q ss_pred             cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCC-------
Q 017257          243 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-------  315 (374)
Q Consensus       243 ~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe-------  315 (374)
                      .+..|.++|+.|+-.-.-   . .+.-+..+..+.+.++=   ..++++|+.+.-+.+|.|+|.|-|++....       
T Consensus         7 ~~~yL~l~vlgGkAFld~---l-~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~~   79 (156)
T PF15627_consen    7 GRRYLHLRVLGGKAFLDH---L-QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGSTA   79 (156)
T ss_pred             CceEEEEEEeCchhHhhh---h-hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccch
Confidence            456799999998754210   0 00002233444455541   136889999998899999999999986442       


Q ss_pred             c------cEEEEEEEeeCCCCCCCccEEEEEECcc-ccCcce----EEEccCCCCC-ccCCeEEEEEEEE
Q 017257          316 L------ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEF  373 (374)
Q Consensus       316 l------a~Lrf~V~D~d~~~~dd~iG~~~ipl~~-L~~GyR----~vpL~d~~g~-~~~~~~L~v~i~f  373 (374)
                      .      .-|++.|---|..+...++|+.++.... |..|+.    .|.|....++ ..+-+-|-++++.
T Consensus        80 ~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lEL  149 (156)
T PF15627_consen   80 TTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLEL  149 (156)
T ss_pred             hHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEe
Confidence            1      2366777666655556899999988775 456764    4677776555 2344567777764

>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]

Probab=83.36  E-value=7.3  Score=42.49  Aligned_cols=102  Identities=15%  Similarity=0.160  Sum_probs=59.5

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEE--Ee-cCCCCceeeeeeeccCCCCCccCcEEEEEeecCC---ccEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVG--IA-GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALL  319 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~--i~-g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~L  319 (374)
                      .++|+++++.....+         ...|-+|.|+  +. |...=+....|.-+...-+|.||+.++|+|...+   .|.|
T Consensus       344 ~frI~l~~is~~n~~---------~t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~ArL  414 (1076)
T KOG0904|consen  344 PFRIKLVGISKVNLP---------ETVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMARL  414 (1076)
T ss_pred             ceEEEEeeccccCCC---------cccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhhhh
Confidence            467888777654321         1234444444  33 3211122234444443468999999999987544   5788


Q ss_pred             EEEEEeeC----------------CCCCCCccEEEEEECc----cccCcceEEEccC
Q 017257          320 RIEVHEYD----------------MSEKDDFGGQTCLPVS----ELKQGIRAVPLHD  356 (374)
Q Consensus       320 rf~V~D~d----------------~~~~dd~iG~~~ipl~----~L~~GyR~vpL~d  356 (374)
                      .|.|+.--                .....-.+||+.+-|-    .|++|-+.+.+..
T Consensus       415 c~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~Lh~W~  471 (1076)
T KOG0904|consen  415 CLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVLHMWP  471 (1076)
T ss_pred             eeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEEEecC
Confidence            88877531                1122447888887774    5788977665543

>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]

Probab=83.30  E-value=1.4  Score=47.98  Aligned_cols=97  Identities=12%  Similarity=0.177  Sum_probs=72.3

Q ss_pred             CCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcc-
Q 017257          272 PDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI-  349 (374)
Q Consensus       272 ~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy-  349 (374)
                      .++|+.+.+...    .-.+|..+.+. -+|.|.+.|+.-+...+ +.+.|+|.+.+..+-..++|.+.+|+-.+..|- 
T Consensus       138 ~e~Ylt~~l~~~----~~~~t~~~~~f~e~s~~~f~~~~~~~h~~-g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~  212 (887)
T KOG1329|consen  138 LENYLTVVLHKA----RYRRTHVIYEFLENSRWSFSFDIGFAHKA-GYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR  212 (887)
T ss_pred             ccchheeeechh----hhhchhhhhcccccchhhhhccccccccc-cEEEEeecCCccccceeEEEEeccchhhhhcccc
Confidence            578999998752    34578877777 49999998877665553 689999999887665678899999998888774 


Q ss_pred             --eEEEccCCCCCccC-CeEEEEEEEE
Q 017257          350 --RAVPLHDRKGERYK-SVKLLMHFEF  373 (374)
Q Consensus       350 --R~vpL~d~~g~~~~-~~~L~v~i~f  373 (374)
                        .+.++++.++.+.. ++++.+++.|
T Consensus       213 ~~~~~~Il~~d~~~~~~~~~~~~~~~~  239 (887)
T KOG1329|consen  213 IGGWFPILDNDGKPHQKGSNESLRLGF  239 (887)
T ss_pred             ccceeeeeccCCccccCCcccceEEee
Confidence              36788888888764 3455555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	374
1qas_A	622	1-Phosphatidylinositol-4,5-Bisphosphate Phosphodies		2e-34
1djg_A	624	Phosphoinositide-Specific Phospholipase C-Delta1 Fr		2e-34
3qr0_A	816	Crystal Structure Of S. Officinalis Plc21 Length =		3e-24
3qr1_A	813	Crystal Structure Of L. Pealei Plc21 Length = 813		5e-24
3ohm_B	885	Crystal Structure Of Activated G Alpha Q Bound To I		3e-23
4gnk_B	1235	Crystal Structure Of Galphaq In Complex With Full-l		3e-23
2fju_B	799	Activated Rac1 Bound To Its Effector Phospholipase		2e-18
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-05
4dnl_A	140	Crystal Structure Of A C2 Domain Of A Protein Kinas		1e-04
1a25_A	149	C2 Domain From Protein Kinase C (Beta) Length = 149		1e-04
1dsy_A	139	C2 Domain From Protein Kinase C (Alpha) Complexed W		2e-04
3gpe_A	137	Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain		2e-04
2uzp_A	144	Crystal Structure Of The C2 Domain Of Human Protein		5e-04
2nsq_A	155	Crystal Structure Of The C2 Domain Of The Human E3		6e-04

>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase Delta 1 Length = 622

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/236 (37%), Positives = 126/236 (53%), Gaps = 12/236 (5%)
Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S SE +    +   GN  VR     L RIYP G R DSSNY+P+  W+ G Q+VA N Q 
Sbjct: 388 SFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQT 447
Query: 199 HGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA----KKTLKVTVYMG 254
            G  + +  G F+ NGGCGYV KP FL      N  F+ +          + L+V +  G
Sbjct: 448 PGPEMDVYLGCFQDNGGCGYVLKPAFLRDP---NTTFNSRALTQGPWWRPERLRVRIISG 504
Query: 255 EGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSV 313
           +      P  + +  S  D    V I GV  DT  ++T  + +N + P W+ EFEF ++V
Sbjct: 505 Q----QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTV 560
Query: 314 PELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 369
           P+LAL+R  V +YD S K+DF GQ+ +P + LKQG R V L  + G+++ S  L +
Sbjct: 561 PDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFV 616

>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat Complexed With Lanthanum Length = 624

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/236 (37%), Positives = 126/236 (53%), Gaps = 12/236 (5%)
Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S SE +    +   GN  VR     L RIYP G R DSSNY+P+  W+ G Q+VA N Q 
Sbjct: 390 SFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQT 449
Query: 199 HGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA----KKTLKVTVYMG 254
            G  + +  G F+ NGGCGYV KP FL      N  F+ +          + L+V +  G
Sbjct: 450 PGPEMDVYLGCFQDNGGCGYVLKPAFLRDP---NTTFNSRALTQGPWWRPERLRVRIISG 506
Query: 255 EGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSV 313
           +      P  + +  S  D    V I GV  DT  ++T  + +N + P W+ EFEF ++V
Sbjct: 507 Q----QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTV 562
Query: 314 PELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLM 369
           P+LAL+R  V +YD S K+DF GQ+ +P + LKQG R V L  + G+++ S  L +
Sbjct: 563 PDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFV 618

>pdb|3QR0|A Chain A, Crystal Structure Of S. Officinalis Plc21 Length = 816

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S+ E Q  N +     D V + ++ + RIYPKG RVDSSNY P I W+ G Q+VA N Q 
Sbjct: 543 SMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQC 602
Query: 199 HGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWY 258
              ++ +  G+F  NG  GY+ KP F+ +    ++ FDP  +      +  T+ +     
Sbjct: 603 FDIAMCVNLGVFEYNGCSGYLLKPEFMRKL---DKRFDPFTESTVDGVVAGTIEI----- 654
Query: 259 YDFPHTHFDAYSPPDFYARVGIAGVPADTVMK--KTKTLEDNWIPSWNEEFEF---PLSV 313
                  F +      Y  V + G+P DTV K  KTK +E+N +  + +E  F    + +
Sbjct: 655 -KIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVL 713
Query: 314 PELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHD 356
           P+LA++RI V E    E   F G   +P+  +K G R VPL +
Sbjct: 714 PDLAVVRIIVSE----ENGKFIGHRVMPLDGIKPGYRHVPLRN 752

>pdb|3QR1|A Chain A, Crystal Structure Of L. Pealei Plc21 Length = 813

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 18/223 (8%)
Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S+ E Q  N +     D V + ++ L RIYPKG RVDSSNY P I W+ G Q+VA N Q 
Sbjct: 543 SMVETQALNKLKDNPEDFVDYNKKQLTRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQC 602
Query: 199 HGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWY 258
              ++ +  G+F  NG  GY+ KP F+ +    ++ FDP  +      +  T+ +     
Sbjct: 603 FDVAMCVNLGVFEYNGCSGYLLKPEFMRKL---DKRFDPFTESTVDGVVAGTIEI----- 654
Query: 259 YDFPHTHFDAYSPPDFYARVGIAGVPADTVMK--KTKTLEDNWI-PSWNEE-FEF-PLSV 313
                  F +      Y  V + G+P DTV K  KTKT+ +N + P +NE  F F  + +
Sbjct: 655 -KIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTKTVNNNGMDPYYNENAFVFKKVVL 713
Query: 314 PELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHD 356
           P+LA++RI V+E    +   F G   +P+  +K G R +PL +
Sbjct: 714 PDLAVVRIIVNE----DGGKFIGHRLMPLDGIKPGYRHIPLRN 752

>pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its Effector Phospholipase C Beta 3 Length = 885

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 25/226 (11%)
Query: 155 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANG 214
           + V + ++ L RIYPKG RVDSSNY P + W+ G Q+VA N Q    ++ L  G+F  NG
Sbjct: 634 EFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNG 693
Query: 215 GCGYVKKPNFLLQTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYS 270
             GY+ KP F+ +    ++ FDP  ++         L+V V  G+          F +  
Sbjct: 694 RSGYLLKPEFMRRP---DKSFDPFTEVIVDGIVANALRVKVISGQ----------FLSDR 740
Query: 271 PPDFYARVGIAGVPADTVMK-KTKTLEDN-WIPSWNEE-FEFP-LSVPELALLRIEVHEY 326
               Y  V + G+P DT  K +T+T + N + P W+EE F+FP + +P LA LRI   E 
Sbjct: 741 KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE- 799
Query: 327 DMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFE 372
              E   F G   LPVS ++ G   V L +   +      LL++ E
Sbjct: 800 ---EGGKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPALLIYTE 842

>pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length Human Plcbeta3 Length = 1235

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 25/226 (11%)
Query: 155 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANG 214
           + V + ++ L RIYPKG RVDSSNY P + W+ G Q+VA N Q    ++ L  G+F  NG
Sbjct: 636 EFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNG 695
Query: 215 GCGYVKKPNFLLQTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYS 270
             GY+ KP F+ +    ++ FDP  ++         L+V V  G+          F +  
Sbjct: 696 RSGYLLKPEFMRRP---DKSFDPFTEVIVDGIVANALRVKVISGQ----------FLSDR 742
Query: 271 PPDFYARVGIAGVPADTVMK-KTKTLEDN-WIPSWNEE-FEFP-LSVPELALLRIEVHEY 326
               Y  V + G+P DT  K +T+T + N + P W+EE F+FP + +P LA LRI   E 
Sbjct: 743 KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE- 801
Query: 327 DMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFE 372
              E   F G   LPVS ++ G   V L +   +      LL++ E
Sbjct: 802 ---EGGKFVGHRILPVSAIRSGYHYVCLRNEANQPLCLPALLIYTE 844

>pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta 2 Length = 799

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 139 SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQG 198
           S +E +  + +       V + +R + RIYPKG R+DSSNY P + W+ G QMVA N Q 
Sbjct: 571 SFTELKAYDLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQT 630
Query: 199 HGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDP----KVKLPAKKTLKVTVYMG 254
               +     +F  NG  GY+ K  F+ +    ++ F+P    ++ +    TL +TV  G
Sbjct: 631 MDLPMQQNMAVFEFNGQSGYLLKHEFMRRP---DKQFNPFSVDRIDVVVATTLSITVISG 687
Query: 255 EGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE---DNWIPSWNEE-FEF- 309
           +          F +      Y  V + G+P D   +    L    ++  P W EE F F 
Sbjct: 688 Q----------FLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFE 737
Query: 310 PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 355
            + +PELA LR+ V    M E + F G   +P++ L  G   + LH
Sbjct: 738 KILMPELASLRVAV----MEEGNKFLGHRIIPINALNSGYHHLCLH 779

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEK 331
           D Y ++ +   P     +KTKT++ +  P WNE F F L   +    L +E+ ++D++ +
Sbjct: 194 DPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSR 253
Query: 332 DDFGGQTCLPVSELKQG 348
           +DF G     +SEL++ 
Sbjct: 254 NDFMGSLSFGISELQKA 270

>pdb|4DNL|A Chain A, Crystal Structure Of A C2 Domain Of A Protein Kinase C Alpha (Prkca) From Homo Sapiens At 1.90 A Resolution Length = 140

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEK 331
           D Y ++ +   P +   +KTKT+     P WNE F F L   +    L +E+ ++D + +
Sbjct: 40  DPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTR 99
Query: 332 DDFGGQTCLPVSELKQ 347
           +DF G     VSEL +
Sbjct: 100 NDFXGSLSFGVSELXK 115

>pdb|1A25|A Chain A, C2 Domain From Protein Kinase C (Beta) Length = 149

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEK 331
           D Y ++ +   P     +KTKT++ +  P WNE F F L   +    L +E+ ++D++ +
Sbjct: 53  DPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSR 112
Query: 332 DDFGGQTCLPVSELKQG 348
           +DF G     +SEL++ 
Sbjct: 113 NDFMGSLSFGISELQKA 129

>pdb|1DSY|A Chain A, C2 Domain From Protein Kinase C (Alpha) Complexed With Ca2+ And Phosphatidylserine Length = 139

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEK 331
           D Y ++ +   P +   +KTKT+     P WNE F F L   +    L +E+ ++D + +
Sbjct: 39  DPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTR 98
Query: 332 DDFGGQTCLPVSEL 345
           +DF G     VSEL
Sbjct: 99  NDFMGSLSFGVSEL 112

>pdb|3GPE|A Chain A, Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain Complexed With Ca2+ And Ptdins(4,5)p2 Length = 137

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEK 331
           D Y ++ +   P +   +KTKT+     P WNE F F L   +    L +E+ ++D + +
Sbjct: 38  DPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTR 97
Query: 332 DDFGGQTCLPVSEL 345
           +DF G     VSEL
Sbjct: 98  NDFMGSLSFGVSEL 111

>pdb|2UZP|A Chain A, Crystal Structure Of The C2 Domain Of Human Protein Kinase C Gamma. Length = 144

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA-LLRIEVHEYDMSEK 331
           D Y ++ +   P +   +KT+T++    P WNE F F L   ++   L +EV ++D + +
Sbjct: 42  DPYVKLKLIPDPRNLTKQKTRTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSR 101
Query: 332 DDFGGQTCLPVSEL 345
           +DF G     VSEL
Sbjct: 102 NDFMGAMSFGVSEL 115

>pdb|2NSQ|A Chain A, Crystal Structure Of The C2 Domain Of The Human E3 Ubiquitin-Protein Ligase Nedd4-Like Protein Length = 155

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 267 DAYSPPDFYARVG--IAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 324
           D +   D Y ++   +A    +  + +TKT++    P WNEEF F ++ P    L  EV 
Sbjct: 37  DIFGASDPYVKLSLYVADENRELALVQTKTIKKTLNPKWNEEFYFRVN-PSNHRLLFEVF 95
Query: 325 EYDMSEKDDFGGQTCLPVSEL 345
           + +   +DDF GQ  +P+S L
Sbjct: 96  DENRLTRDDFLGQVDVPLSHL 116

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	374
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	7e-94
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	2e-83
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	7e-78
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	2e-76
1rlw_A	126	Phospholipase A2, CALB domain; hydrolase, C2 domai	4e-12
2ep6_A	133	MCTP2 protein; beta sandwich, Ca2+ binding, membra	1e-11
2fk9_A	157	Protein kinase C, ETA type; ATP-binding, metal-bin	3e-10
2dmh_A	140	Myoferlin; beta-sandwich, FER-1-like protein 3, mu	4e-10
1gmi_A	136	Protein kinase C, epsilon type; PKC, C2 domain, X-	4e-10
2nq3_A	173	Itchy homolog E3 ubiquitin protein ligase; C2 doma	6e-09
3b7y_A	153	E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-	7e-09
3m7f_B	176	E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1	2e-08
1wfj_A	136	Putative elicitor-responsive gene; C2 domain, rike	2e-08
3rdl_A	137	Protein kinase C alpha type; protein kinase PKC, t	4e-08
2enp_A	147	B/K protein; C2 type 1,beta sandwich, structural g	5e-08
1a25_A	149	CALB, protein kinase C (beta); calcium++/phospholi	5e-08
3f04_A	143	Synaptotagmin-1; C2A, calcium, cell junction, cyto	6e-08
1wfm_A	138	Synaptotagmin XIII; C2 domain, exocytosis, neurotr	6e-08
1dqv_A	296	Synaptotagmin III; beta sandwich, calcium ION, C2	7e-08
1dqv_A	296	Synaptotagmin III; beta sandwich, calcium ION, C2	4e-06
1rsy_A	152	Synaptotagmin I; calcium/phospholipid binding prot	1e-07
2r83_A	284	Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel	1e-07
2r83_A	284	Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel	4e-07
3fdw_A	148	Synaptotagmin-like protein 4; structural genomics,	2e-07
3kwu_A	148	MUNC13-1; calcium binding protein, phospholipid bi	3e-07
2z0u_A	155	WW domain-containing protein 1; C2 domain, alterna	3e-07
2cm5_A	166	Rabphilin-3A; protein transport, zinc-finger, Ca2+	5e-07
3fbk_A	153	RGS3, RGP3, regulator of G-protein signaling 3; al	9e-07
2cjt_A	131	UNC-13 homolog A, MUNC13-1; phorbol-ester binding,	1e-06
2d8k_A	141	Synaptotagmin VII; exocytosis, calcium binding, ly	1e-06
1w15_A	153	Synaptotagmin IV; metal binding protein, endocytos	1e-06
3pyc_A	132	E3 ubiquitin-protein ligase smurf1; phospholipid b	2e-06
1cjy_A	749	CPLA2, protein (cytosolic phospholipase A2); lipid	2e-06
3n5a_A	138	Synaptotagmin-7; calcium/phospholipid binding prot	2e-06
2q3x_A	171	Regulating synaptic membrane exocytosis protein 1;	2e-06
2chd_A	142	Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium	3e-06
1ugk_A	138	Synaptotagmin IV, KIAA1342; beta sandwich, structu	3e-06
1tjx_A	159	Similar to synaptotagmini/P65; C2B domain, calcium	5e-06
1rh8_A	142	Piccolo protein; beta-sandwich, metal binding prot	6e-06
2dmg_A	142	KIAA1228 protein; beta-sandwich, structural genomi	9e-06
2b3r_A	134	Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA	1e-05
2bwq_A	129	Regulating synaptic membrane exocytosis protein 2;	1e-05
3nsj_A	540	Perforin-1; pore forming protein, immune system; H	2e-05
3l9b_A	144	Otoferlin; C2-domain, beta-sheets, cell membrane,	2e-05
1v27_A	141	Regulating synaptic membrane exocytosis protein 2;	4e-05
2cjs_A	167	UNC-13 homolog A, MUNC13-1; neurotransmitter trans	5e-05
3bxj_A	483	RAS GTPase-activating protein syngap; GTPase activ	8e-05

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624

 Score =  292 bits (747), Expect = 7e-94
 Identities = 111/375 (29%), Positives = 156/375 (41%), Gaps = 26/375 (6%)

Query: 1   MVTQTLGEILFT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 59
            +   LG IL   P        PSPE LK +I++  K     L A  E   E      + 
Sbjct: 272 HLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATDVSDEV 331

Query: 60  SADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGK 119
            A E                            +  +    + +    PE   +I      
Sbjct: 332 EAAEMEDEAV---------------------RSQVQHKPKEDKLKLVPELSDMIIYCKSV 370

Query: 120 PKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 179
             GG               S SE +    +   GN  VR     L RIYP G R DSSNY
Sbjct: 371 HFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNY 430

Query: 180 NPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 239
           +P+  W+ G Q+VA N Q  G  + +  G F+ NGGCGYV KP FL              
Sbjct: 431 SPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNTTFNSRALT- 489

Query: 240 KLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 299
           + P  +  ++ V +  G     P  + +  S  D    V I GV  DT  ++T  + +N 
Sbjct: 490 QGPWWRPERLRVRIISGQ--QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNG 547

Query: 300 I-PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRK 358
             P W+ EFEF ++VP+LAL+R  V +YD S K+DF GQ+ +P + LKQG R V L  + 
Sbjct: 548 FNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKN 607

Query: 359 GERYKSVKLLMHFEF 373
           G+++ S  L +    
Sbjct: 608 GDQHPSATLFVKISI 622

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799

 Score =  269 bits (688), Expect = 2e-83
 Identities = 85/389 (21%), Positives = 143/389 (36%), Gaps = 30/389 (7%)

Query: 1   MVTQTLGEILFTPGSECLK-----EFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQ 55
                 G++L T   E          PSPE L+ +I+I  K  +        K+   +++
Sbjct: 423 YCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAE 482

Query: 56  RGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIA- 114
                +    W  E            ++++ + G  ++EE    +S    A         
Sbjct: 483 GSSPPSAPAVWAGEEGTELE-EEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEE 541

Query: 115 ----IHAGKPKGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYP 169
               ++  +P   +        ++   + S +E +  + +       V + +R + RIYP
Sbjct: 542 MSSLVNYIQPTKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYP 601

Query: 170 KGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTG 229
           KG R+DSSNY P + W+ G QMVA N Q     +     +F  NG  GY+ K  F+ +  
Sbjct: 602 KGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRRPD 661

Query: 230 PHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM 289
                F+P         +  T               F +      Y  V + G+P D   
Sbjct: 662 KQ---FNPFSVDRIDVVVATT------LSITVISGQFLSERSVRTYVEVELFGLPGDPKR 712

Query: 290 KKTKT---LEDNWIPSWNEE-FEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE 344
           +         ++  P W EE F F  + +PELA LR+ V E      + F G   +P++ 
Sbjct: 713 RYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINA 768

Query: 345 LKQGIRAVPLHDRKGERYKSVKLLMHFEF 373
           L  G   + LH           L +  E 
Sbjct: 769 LNSGYHHLCLHSESNMPLTMPALFIFLEM 797

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885

 Score =  256 bits (653), Expect = 7e-78
 Identities = 97/430 (22%), Positives = 152/430 (35%), Gaps = 70/430 (16%)

Query: 1   MVTQTLGEILFTPGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQ 55
                 G+ L     +          PSP+ L  RI++  K          +        
Sbjct: 427 YCRSIFGDALLIEPLDKYPLAPGVPLPSPQDLMGRILVKNKKRHRPSAGGPDSAGRKRPL 486

Query: 56  RGKGSADEEAWGKEVPNLKSLNNSACD--------------------------------- 82
               SA  E+     P+   L + + D                                 
Sbjct: 487 EQSNSALSESSAATEPSSPQLGSPSSDSCPGLSNGEEVGLEKPSLEPQKSLGDEGLNRGP 546

Query: 83  ----KDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL-----------KEC 127
                 D +   +++EE+     +     E      ++A +    L            E 
Sbjct: 547 YVLGPADREDEEEDEEEEEQTDPKKPTTDEGTASSEVNATEEMSTLVNYIEPVKFKSFEA 606

Query: 128 LKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 187
            +         S  E +    +     + V + ++ L RIYPKG RVDSSNY P + W+ 
Sbjct: 607 ARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNV 666

Query: 188 GAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTL 247
           G Q+VA N Q    ++ L  G+F  NG  GY+ KP F+ +       FDP  ++     +
Sbjct: 667 GCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKS---FDPFTEVIVDGIV 723

Query: 248 KVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDN-WIPSWNE 305
                             F +      Y  V + G+P DT  K +T+T + N + P W+E
Sbjct: 724 ANA------LRVKVISGQFLSDRKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDE 777

Query: 306 E-FEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 363
           E F+FP + +P LA LRI   E        F G   LPVS ++ G   V L +   +   
Sbjct: 778 EPFDFPKVVLPTLASLRIAAFEEG----GKFVGHRILPVSAIRSGYHYVCLRNEANQPLC 833

Query: 364 SVKLLMHFEF 373
              LL++ E 
Sbjct: 834 LPALLIYTEA 843

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816

 Score =  250 bits (639), Expect = 2e-76
 Identities = 91/383 (23%), Positives = 149/383 (38%), Gaps = 54/383 (14%)

Query: 1   MVTQTLGEILFTPGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQ 55
              +  GE+L     +          P+P  L+++I+I  K   +     EE     D  
Sbjct: 431 YCNEAFGELLLDKPIDGHPLKPGVPLPTPYDLRKKILIKNKKMHKGTGDDEELAGLTD-- 488

Query: 56  RGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAI 115
                                       ++        ++      +   A E   L+  
Sbjct: 489 ----------------------------EEKKKIEKEKKDAGTAAKEAEAAEEMSALVNY 520

Query: 116 HAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVD 175
                    ++  K D       S+ E Q  N +     D V + ++ + RIYPKG RVD
Sbjct: 521 IQPVHFTTFEQAQKKDRHYEMS-SMVETQALNKLKDNPEDFVDYNKKQITRIYPKGTRVD 579

Query: 176 SSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVF 235
           SSNY P I W+ G Q+VA N Q    ++ +  G+F  NG  GY+ KP F+ +    ++ F
Sbjct: 580 SSNYVPQIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKL---DKRF 636

Query: 236 DPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK--KTK 293
           DP  +      +  T+ +            F +      Y  V + G+P DTV K  KTK
Sbjct: 637 DPFTESTVDGVVAGTIEI------KIISAQFLSDKQISSYVEVEMYGLPTDTVRKKFKTK 690

Query: 294 TLEDNWI-PSWNEEFEF--PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 350
            +E+N + P ++E+      + +P+LA++RI V E +      F G   +P+  +K G R
Sbjct: 691 IIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDGIKPGYR 746

Query: 351 AVPLHDRKGERYKSVKLLMHFEF 373
            VPL +          +  H   
Sbjct: 747 HVPLRNESNRPLGLASVFAHIVA 769

>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126

 Score = 61.6 bits (150), Expect = 4e-12
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326
           D    PD Y  + I+  P     K+T+   ++  P WNE FEF L   +  +L I + + 
Sbjct: 22  DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 79

Query: 327 DMSEKDDFGGQTCLPVSELKQG 348
           +    D+  G     VS +K G
Sbjct: 80  NYV-MDETLGTATFTVSSMKVG 100

>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133

 Score = 61.1 bits (149), Expect = 1e-11
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 349
            +T T+  N  P WN+ F FP+      +L + V + D  +  DF G+  +P+  ++ G 
Sbjct: 47  LQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ 105

Query: 350 -RAVPLHDRKGERYKSVKLLMHFEFI 374
                L ++  E+     + +  + I
Sbjct: 106 PNCYVLKNKDLEQAFKGVIYLEMDLI 131

>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157

 Score = 57.3 bits (138), Expect = 3e-10
 Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 10/116 (8%)

Query: 246 TLKVTVYMGEG----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 301
            L+V +    G     +          +   D Y  V +        + +T T +    P
Sbjct: 30  YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD----QVRVGQTSTKQKTNKP 85

Query: 302 SWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDR 357
           ++NEEF     V +   L + V        D F     L   EL +   A    + 
Sbjct: 86  TYNEEFCAN--VTDGGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEG 139

>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSELK 346
           KKTK +++   P WNE  EF L    L     L I V +++   ++   G   + + +L 
Sbjct: 40  KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLT 99

Query: 347 QG------IRAVPLHDRKGE 360
                    + + L + KG+
Sbjct: 100 GDQSRSLPYKLISLLNEKGQ 119

>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 11/108 (10%)

Query: 246 TLKVTVYMGEG-----WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
            LK+ +          W               D Y  + +     D+ + +T T +    
Sbjct: 7   LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD----DSRIGQTATKQKTNS 62

Query: 301 PSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 348
           P+W++EF     V     + + V        DDF     +   EL Q 
Sbjct: 63  PAWHDEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108

>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173

 Score = 54.1 bits (130), Expect = 6e-09
 Identities = 21/111 (18%), Positives = 34/111 (30%), Gaps = 13/111 (11%)

Query: 235 FDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKT 294
                 L  K  L++TV   +             +  P  Y  V + G       KKT+ 
Sbjct: 26  LGSMGSLTMKSQLQITVISAKLKENK------KNWFGPSPYVEVTVDGQS-----KKTEK 74

Query: 295 LEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
             +   P W +       V  ++ L   V  +   + D   G   L + E 
Sbjct: 75  CNNTNSPKWKQPLTVI--VTPVSKLHFRVWSHQTLKSDVLLGTAALDIYET 123

>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153

 Score = 53.2 bits (128), Expect = 7e-09
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 275 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 333
           Y RV +       +   +TKT++ +  P WNEE  F +  P+   L  EV + +   +DD
Sbjct: 44  YVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFEVFDENRLTRDD 102

Query: 334 FGGQTCLPVSELKQG 348
           F GQ  +P+  L   
Sbjct: 103 FLGQVDVPLYPLPTE 117

>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176

 Score = 52.6 bits (126), Expect = 2e-08
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 275 YARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDD 333
           Y RV +    +  +   +TKT++ +  P WNEE  F +  P+   +  EV + +   +DD
Sbjct: 32  YVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDENRLTRDD 90

Query: 334 FGGQTCLPVSELKQG 348
           F GQ  +P+  L   
Sbjct: 91  FLGQVDVPLYPLPTE 105

>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 14/129 (10%)

Query: 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 305
           TL+V +   +          F     P  Y ++        + + +         P WNE
Sbjct: 11  TLEVVLVSAK----GLEDADFLNNMDP--YVQLTCRTQDQKSNVAEGMGTT----PEWNE 60

Query: 306 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAVPLHDRKGERYK 363
            F F +S      L+ ++ + D+  +DD  G+  +P+  +  +  I     +  K E YK
Sbjct: 61  TFIFTVSEGT-TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119

Query: 364 -SVKLLMHF 371
             + + + F
Sbjct: 120 GEIWVALSF 128

>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 147

 Score = 50.9 bits (122), Expect = 5e-08
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 5/107 (4%)

Query: 242 PAKKTLKVTVYMGEG-WYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
                L V V                   +  + Y ++ +  +P     K+T        
Sbjct: 23  LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICL--LPDQKNSKQTGVKRKTQK 80

Query: 301 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
           P + E + F +   E     L + V ++D   +    G+  +P+ E+
Sbjct: 81  PVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEV 127

>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Length = 149

 Score = 50.5 bits (121), Expect = 5e-08
 Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHEYDMSEKDDFGGQTCLPVSELK 346
           +KTKT++ +  P WNE F F L   +    L +E+ ++D++ ++DF G     +SEL+
Sbjct: 70  QKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQ 127

>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Length = 143

 Score = 50.4 bits (121), Expect = 6e-08
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
            +TK       P +NE+F F +   EL    L + V+++D   K D  G+  +P++ +
Sbjct: 71  FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 128

>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138

 Score = 50.4 bits (121), Expect = 6e-08
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
            +T   +     +W E    PL+  EL    L + +   D   +    G+  L +   
Sbjct: 61  AQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGT 118

>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296

 Score = 52.5 bits (126), Expect = 7e-08
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 2/81 (2%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 324
           D     D Y +  +         +KT   ++   P++NE   F ++   +    L I V 
Sbjct: 168 DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVV 227

Query: 325 EYDMSEKDDFGGQTCLPVSEL 345
           +YD    ++  G   +     
Sbjct: 228 DYDCIGHNEVIGVCRVGPEAA 248

>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296

 Score = 47.1 bits (112), Expect = 4e-06
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIEVH 324
           D+    D Y ++ +  +P      +TK       P +NE F+F + + ELA   L   V+
Sbjct: 36  DSNGFSDPYVKIYL--LPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93

Query: 325 EYDMSEKDDFGGQTCLP 341
           ++D   + D  GQ  L 
Sbjct: 94  DFDRFSRHDLIGQVVLD 110

>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Length = 152

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 347
            +TK       P +NE+F F +   EL    L + V+++D   K D  G+  +P++ +  
Sbjct: 79  FETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF 138

Query: 348 G 348
           G
Sbjct: 139 G 139

>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 324
           D     D Y ++ +         KKT   ++   P +NE F F +   ++    + + V 
Sbjct: 166 DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVL 225

Query: 325 EYDMSEKDDFGGQTCLPVSELKQGIR 350
           +YD   K+D  G+  +  +     +R
Sbjct: 226 DYDKIGKNDAIGKVFVGYNSTGAELR 251

>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284

 Score = 50.2 bits (120), Expect = 4e-07
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSE 330
           D Y +V +  +P      +TK       P +NE+F F +   ELA   L + V+++D   
Sbjct: 41  DPYVKVFL--LPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98

Query: 331 KDDFGGQTCLPVSELKQG 348
           K D  G+  +P++ +  G
Sbjct: 99  KHDIIGEFKVPMNTVDFG 116

>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Length = 148

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
           +KT    D   P ++E   + +    LA   L+  V  +    ++ F G+  + +   
Sbjct: 63  RKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSW 120

>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} PDB: 3kwt_A* Length = 148

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 13/87 (14%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK-----------DDFGGQT 338
           K+TKT+  N  P W E F F         +++ V + D   K           DDF GQT
Sbjct: 51  KRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQT 109

Query: 339 CLPVSELKQGI-RAVPLHDRKGERYKS 364
            + V  L   +     L  R  +   S
Sbjct: 110 IIEVRTLSGEMDVWYNLDKRTDKSAVS 136

>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Length = 155

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 266 FDAYSPPDFYARVGIAGVPADTVMK-KTKTLEDNWIPSWNEEFEFPLSVPELAL--LRIE 322
                      RV +      T    +T+ L+ +    +NE F   +S P L    LR++
Sbjct: 58  LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117

Query: 323 VHEYDMSEKDDFGGQTCLPVSEL 345
           V   D S  ++  G   + ++E+
Sbjct: 118 VCTTDRSHLEECLGGAQISLAEV 140

>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Length = 166

 Score = 48.2 bits (115), Expect = 5e-07
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 347
            KT+  +    P +NEEF + +   +LA   L I V +YD+ + +D+ G   L +S   +
Sbjct: 76  HKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGE 135

Query: 348 GIR 350
            ++
Sbjct: 136 RLK 138

>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} Length = 153

 Score = 47.4 bits (113), Expect = 9e-07
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELAL-LRIEV-HEYDMSEKDDFGGQTCLPVSELKQ 347
           +KT+T+ D   P+++E F FP+   +    L + V +    S +    G     V  L  
Sbjct: 65  QKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLT 124

Query: 348 GIRAV----PLHDRKGERYKSVKLLM 369
             + +     L      R K +K+  
Sbjct: 125 PDKEISGWYYLLGEHLGRTKHLKVAR 150

>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 271 PPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE 330
             + Y  + +  V + T+  +         PSW ++F F ++  +L L  +EV    +  
Sbjct: 22  KFNTYVTLKVQNVKSTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-I 73

Query: 331 KDDFGGQTCLPVSELKQ 347
            D   G   +P+  ++Q
Sbjct: 74  WDTMVGTVWIPLRTIRQ 90

>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 345
            +TK    N  P WNE F F     E  +   L ++V +YD   ++D  G+  +P++++
Sbjct: 63  LETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKV 121

>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Length = 153

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%)

Query: 267 DAYSPPDFYARVGIAGVPADTVM--KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 322
           D     D Y +V +    A   +  KKT   +      +NE F F +    L    +   
Sbjct: 46  DVSGLSDPYVKVNL--YHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL 103

Query: 323 VHEYDMSEKDDFGGQTCLPVSELKQGIR 350
           V + +   +++  G+  L  +    G  
Sbjct: 104 VLDSERGSRNEVIGRLVLGATAEGSGGG 131

>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Length = 132

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 8/80 (10%)

Query: 272 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEK 331
           PD +A++ + G         T T+++   P WN+ ++    V +   + I V  +    K
Sbjct: 26  PDPFAKIVVDG---SGQCHSTDTVKNTLDPKWNQHYDLY--VGKTDSITISVWNHKKIHK 80

Query: 332 DD---FGGQTCLPVSELKQG 348
                F G   L  + + + 
Sbjct: 81  KQGAGFLGCVRLLSNAISRL 100

>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Length = 749

 Score = 49.2 bits (116), Expect = 2e-06
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 326
           D    PD Y  + I+  P     K+T+   ++  P WNE FEF L   +  +L I + + 
Sbjct: 37  DMLDTPDPYVELFISTTPDSR--KRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94

Query: 327 DMSEKDDFGGQTCLPVSELK 346
           +    D+  G     VS +K
Sbjct: 95  NY-VMDETLGTATFTVSSMK 113

>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Length = 138

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 347
           KKT T + N  P +NE F F +   +L    + I V + D   ++D  G+  L       
Sbjct: 55  KKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG 114

Query: 348 GIR 350
            ++
Sbjct: 115 EVK 117

>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Length = 171

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 18/76 (23%), Positives = 27/76 (35%)

Query: 270 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS 329
           S P  Y +V +    A    KKT+       P + +   F  S     L  I   +Y   
Sbjct: 50  STPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRM 109

Query: 330 EKDDFGGQTCLPVSEL 345
           +   F G   + + EL
Sbjct: 110 DHKCFMGVAQILLEEL 125

>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Length = 142

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 290 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
            +TKTL +   P WNE  ++  ++  ++    LRI V + D    ++F G+T   + +L
Sbjct: 68  LRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKL 126

>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 290 KKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELK 346
            KT+ L     P+++E F F  +   ++    L   +  +D   +DD  G+  +P+S ++
Sbjct: 60  VKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIE 119

>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Length = 159

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 266 FDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEV 323
            D     D Y ++ +         KKT   ++   P +NE F F +   ++    + + V
Sbjct: 40  MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99

Query: 324 HEYDMSEKDDFGGQTCLPVSELKQGIR 350
            +YD   K+D  G+  +  +     +R
Sbjct: 100 LDYDKIGKNDAIGKVFVGYNSTGAELR 126

>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Length = 142

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 272 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEVHEYDM 328
           P    +V +    +    ++TK ++ +  P WN+   +  +S+ +L    L + V +YD 
Sbjct: 49  PG-RGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR 107

Query: 329 SEKDDFGGQTCLPVSEL 345
              +DF G+  + +S  
Sbjct: 108 FSSNDFLGEVLIDLSST 124

>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 142

 Score = 43.9 bits (104), Expect = 9e-06
 Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDD--FGGQTCLPVSEL 345
           +KT   +    P +++ F+F +S+PE+    L + V         D    G+  + ++  
Sbjct: 62  RKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASE 121

>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Length = 134

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELAL---LRIEVHEYDMSEKDDFGGQTCLPVSEL 345
           +KTK       P++NE   +     E      L++ V   +   ++ F G   LP+ + 
Sbjct: 58  RKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDF 116

>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Length = 129

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 323
           +   P + Y ++      +D   ++TKT++    P WN+ F + P+   E    +L I +
Sbjct: 34  EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 93

Query: 324 HEYDM--SEKDDFGGQTCLPVSEL 345
            +      E+ +F G+  + +   
Sbjct: 94  WDQARVREEESEFLGEILIELETA 117

>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Length = 540

 Score = 45.7 bits (107), Expect = 2e-05
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 4/79 (5%)

Query: 290 KKTKTLEDNWIPSWNEEFEFPLSVPELA-LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 348
            +T  + +N  P W ++ +F   +      LR++V + D    DD  G           G
Sbjct: 427 FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRS---PHSG 483

Query: 349 IRAVPLHDRKGERYKSVKL 367
              V      G    S   
Sbjct: 484 FHEVTCELNHGRVKFSYHA 502

>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} Length = 144

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 272 PDFYARVGIAGVPADTVMKKTKTLEDNWIP-SWNEEFEFPLSVPELA--LLRIEVHEYDM 328
            D  A+V   G         ++ LE+      ++E F +P++       +L I++  Y  
Sbjct: 37  ADRIAKVTFRGQS-----FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91

Query: 329 SEKDDFGGQTCLPVSEL 345
              +   G   + + ++
Sbjct: 92  VFSNKLIGTFRMVLQKV 108

>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 141

 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEF-PLSVPELA--LLRIEV 323
           +   P + Y ++      +D   ++TKT++    P WN+ F + P+   E    +L I +
Sbjct: 37  EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 96

Query: 324 HEYDM--SEKDDFGGQTCLPVSEL 345
            +      E+ +F G+  + +   
Sbjct: 97  WDQARVREEESEFLGEILIELETA 120

>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Length = 167

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 273 DFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKD 332
           + Y  + +  V + T+  +         PSW ++F F ++  +L L  +EV    +   D
Sbjct: 33  NTYVTLKVQNVESTTIAVRGSQ------PSWEQDFMFEINRLDLGLT-VEVWNKGL-IWD 84

Query: 333 DFGGQTCLPVSELKQ 347
              G   +P+  ++Q
Sbjct: 85  TMVGTVWIPLRTIRQ 99

>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Length = 483

 Score = 43.4 bits (101), Expect = 8e-05
 Identities = 15/80 (18%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 272 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYD---M 328
             +Y  + +  +       K ++   +    W E FEF       AL      + D    
Sbjct: 27  KRYYCELCLDDMLYARTTSKPRSASGDT-VFWGEHFEFNNLPAVRALRLHLYRDSDKKRK 85

Query: 329 SEKDDFGGQTCLPVSELKQG 348
            +K  + G   +PV+ L   
Sbjct: 86  KDKAGYVGLVTVPVATLAGR 105

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	374
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	100.0
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	100.0
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	100.0
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	100.0
2dmh_A	140	Myoferlin; beta-sandwich, FER-1-like protein 3, mu	99.79
2ep6_A	133	MCTP2 protein; beta sandwich, Ca2+ binding, membra	99.77
3b7y_A	153	E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-	99.77
1rlw_A	126	Phospholipase A2, CALB domain; hydrolase, C2 domai	99.76
3pyc_A	132	E3 ubiquitin-protein ligase smurf1; phospholipid b	99.75
3kwu_A	148	MUNC13-1; calcium binding protein, phospholipid bi	99.74
3m7f_B	176	E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1	99.73
1wfj_A	136	Putative elicitor-responsive gene; C2 domain, rike	99.7
2b3r_A	134	Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA	99.69
3n5a_A	138	Synaptotagmin-7; calcium/phospholipid binding prot	99.69
2nq3_A	173	Itchy homolog E3 ubiquitin protein ligase; C2 doma	99.69
1rsy_A	152	Synaptotagmin I; calcium/phospholipid binding prot	99.68
2fk9_A	157	Protein kinase C, ETA type; ATP-binding, metal-bin	99.68
1gmi_A	136	Protein kinase C, epsilon type; PKC, C2 domain, X-	99.67
2chd_A	142	Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium	99.67
2cm5_A	166	Rabphilin-3A; protein transport, zinc-finger, Ca2+	99.67
1w15_A	153	Synaptotagmin IV; metal binding protein, endocytos	99.67
1v27_A	141	Regulating synaptic membrane exocytosis protein 2;	99.67
1a25_A	149	CALB, protein kinase C (beta); calcium++/phospholi	99.66
1tjx_A	159	Similar to synaptotagmini/P65; C2B domain, calcium	99.66
3fdw_A	148	Synaptotagmin-like protein 4; structural genomics,	99.66
3f04_A	143	Synaptotagmin-1; C2A, calcium, cell junction, cyto	99.66
3rdl_A	137	Protein kinase C alpha type; protein kinase PKC, t	99.66
2z0u_A	155	WW domain-containing protein 1; C2 domain, alterna	99.66
2dmg_A	142	KIAA1228 protein; beta-sandwich, structural genomi	99.65
1wfm_A	138	Synaptotagmin XIII; C2 domain, exocytosis, neurotr	99.65
1ugk_A	138	Synaptotagmin IV, KIAA1342; beta sandwich, structu	99.65
2d8k_A	141	Synaptotagmin VII; exocytosis, calcium binding, ly	99.65
1rh8_A	142	Piccolo protein; beta-sandwich, metal binding prot	99.64
3fbk_A	153	RGS3, RGP3, regulator of G-protein signaling 3; al	99.63
2bwq_A	129	Regulating synaptic membrane exocytosis protein 2;	99.62
2enp_A	147	B/K protein; C2 type 1,beta sandwich, structural g	99.62
2q3x_A	171	Regulating synaptic membrane exocytosis protein 1;	99.62
2r83_A	284	Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel	99.59
3l9b_A	144	Otoferlin; C2-domain, beta-sheets, cell membrane,	99.58
2cjt_A	131	UNC-13 homolog A, MUNC13-1; phorbol-ester binding,	99.55
1dqv_A	296	Synaptotagmin III; beta sandwich, calcium ION, C2	99.52
2r83_A	284	Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel	99.51
3jzy_A	510	Intersectin 2; C2 domain, structural genomics cons	99.5
2cjs_A	167	UNC-13 homolog A, MUNC13-1; neurotransmitter trans	99.49
1cjy_A	749	CPLA2, protein (cytosolic phospholipase A2); lipid	99.45
3nsj_A	540	Perforin-1; pore forming protein, immune system; H	99.42
1dqv_A	296	Synaptotagmin III; beta sandwich, calcium ION, C2	99.36
3bxj_A	483	RAS GTPase-activating protein syngap; GTPase activ	99.14
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.13
1yrk_A	126	NPKC-delta, protein kinase C, delta type; C2 domai	98.11
2enj_A	138	NPKC-theta, protein kinase C theta type; beta-sand	98.02
3h4x_A	339	Phosphatidylinositol-specific phospholipase C1; PI	96.4
3hhm_A	1091	Phosphatidylinositol-4,5-bisphosphate 3-kinase cat	95.79
2wxf_A	940	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	95.54
3l4c_A	220	Dedicator of cytokinesis protein 1; DOCK180, DOCK1	95.11
2y3a_A	1092	Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca	94.2
1e7u_A	961	Phosphatidylinositol 3-kinase catalytic subunit; p	93.94

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=100.00  E-value=8.7e-89  Score=710.59  Aligned_cols=345  Identities=32%  Similarity=0.506  Sum_probs=276.7

Q ss_pred             ChHHHhhccccCCCC-CCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||++||||+||+++. ..+..||||++||||||||+|++++..+.....          +. ++    .+++       +
T Consensus       272 ~~~~~~gd~L~~~~~~~~~~~lpsp~~Lk~kilik~k~~~~~~~~~~~~----------~~-~~----~~~~-------~  329 (624)
T 1djx_A          272 HLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGEN----------GS-EA----TDVS-------D  329 (624)
T ss_dssp             HHHHHHGGGBCCSCCTTCCSSCCCTTTTTTCEEEEECCC-----------------------------------------
T ss_pred             HHHHHHhhhhcCCCccCCcCCCCCHHHHCCCEEEEecCCCccccccccc----------Cc-cc----ccCC-------c
Confidence            689999999999874 457999999999999999999997554321100          00 00    0000       0


Q ss_pred             CCCCCCCCCCCCCC-CCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchh
Q 017257           80 ACDKDDFDGGVDND-EEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVR  158 (374)
Q Consensus        80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~  158 (374)
                      ++++++.+.+.... .....++.+.++++|||+||+||++++|++|+.+......++||+||||+++.+++++++.+|++
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ls~l~~y~~~~~f~~~~~~~~~~~~~~~~~S~~E~~~~~~~~~~~~~~~~  409 (624)
T 1djx_A          330 EVEAAEMEDEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVR  409 (624)
T ss_dssp             -------------------------CCCHHHHTTEEEEEEECCCCCCSSSSSSCCTTEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccHHHhhhhhhhcCccCCCcchhhhcCCccceEeeccHHHHHHHHHHhHHHHHH
Confidence            00000000000000 01112235678999999999999999999999987653225799999999999999999999999


Q ss_pred             ccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCC
Q 017257          159 FTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPK  238 (374)
Q Consensus       159 ~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~  238 (374)
                      ||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.||+|||||||++||....   .|+|.
T Consensus       410 ~n~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~g~F~~ng~~GYvlKP~~lr~~~~---~f~p~  486 (624)
T 1djx_A          410 HNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPNT---TFNSR  486 (624)
T ss_dssp             HHHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHHHSGGGCSEEECCGGGGCTTC---CCCTT
T ss_pred             HhhhcceeeccCCccCCCCCCCchHHhhccceeeeecccCCchHHhHHHHHhhcCCCCccEECCHHHcCCCC---CcCcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999998743   58886


Q ss_pred             CCC--C--cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEeec
Q 017257          239 VKL--P--AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSV  313 (374)
Q Consensus       239 ~~~--~--~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v~~  313 (374)
                      ...  +  ....|+|+|++|++|+..    .....+.+||||+|++.|.+.|..++||+++++| +||+|||+|.|.+..
T Consensus       487 ~~~~~~~~~~~~L~V~Vi~A~~L~~~----d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~  562 (624)
T 1djx_A          487 ALTQGPWWRPERLRVRIISGQQLPKV----NKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTV  562 (624)
T ss_dssp             SCCSSTTCCCEEEEEEEEEEESCCCC----SSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESC
T ss_pred             cccccCCccceEEEEEEEEcCCCCcc----cccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEec
Confidence            532  2  457899999999999742    1112467899999999998888889999999998 999999999999999


Q ss_pred             CCccEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          314 PELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       314 pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |++++|+|+|||+|..+++++||++++||.+|++||||+||+|.+|+++.+++|||||+|.
T Consensus       563 ~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~r~v~L~d~~g~~~~~~~L~v~i~~~  623 (624)
T 1djx_A          563 PDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISIQ  623 (624)
T ss_dssp             GGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred             CCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCcEEEeCCCCCcCCCCceEEEEEEEEE
Confidence            9999999999999988889999999999999999999999999999999999999999973

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=100.00  E-value=1.2e-86  Score=709.53  Aligned_cols=352  Identities=25%  Similarity=0.381  Sum_probs=268.0

Q ss_pred             ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||++||||+||++|.+     +...||||++||||||||+|+++...+....+.....+......+.+..|+++......
T Consensus       423 ~~~~~~Gd~L~~~~~~~~~~~~~~~lPSP~~Lk~kIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (799)
T 2zkm_X          423 YCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELE  502 (799)
T ss_dssp             HHHHHHGGGBCCSCCTTSCSSTTCCCCCTTTTTTCEEEECCCC-------------------------------------
T ss_pred             HHHHHhhhheecCCccccccccCCCCCCHHHHCCCEEEEecCCCcccccccccccccccccccccCccccccCccccccc
Confidence            6899999999998743     24799999999999999999997543211000000000000000111122222111000


Q ss_pred             cCCCCCCCCCCCCCCCCCCC---------CcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHH
Q 017257           76 LNNSACDKDDFDGGVDNDEE---------DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLE  146 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~  146 (374)
                       ..+++++++.+  ...+..         ....+...++++|||+||+||++++|++|+.+.+..+ +++|+||||+++.
T Consensus       503 -~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~els~Lv~y~~~~~f~~~~~~~~~~~-~~~~~S~sE~~~~  578 (799)
T 2zkm_X          503 -EEEVEEEEEEE--SGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKNR-SYVISSFTELKAY  578 (799)
T ss_dssp             ----------------CCSHHHHHHHHHTTGGGGGCCCCCHHHHTTCSSCEECCCCCHHHHHHHTC-TTEEEEEEHHHHH
T ss_pred             -ccccccccccc--ccccchhhhhcccccccccccccchhhhhcceeEEecCcCCCchhhhhhcCC-ccceecCCHHHHH
Confidence             00000000000  000100         1111234678999999999999999999998877654 6789999999999


Q ss_pred             HHHhhccccchhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcc
Q 017257          147 NAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLL  226 (374)
Q Consensus       147 ~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr  226 (374)
                      +++++++.+|++||++||+||||+|+|||||||||++||++|||||||||||+|++||||+|||+.||+|||||||++||
T Consensus       579 ~~~~~~~~~~~~~n~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmVAlN~Qt~d~~m~ln~g~F~~nG~cGYVlKP~~lr  658 (799)
T 2zkm_X          579 DLLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMR  658 (799)
T ss_dssp             HHHHHSHHHHHHHHHHSEEEEECCTTCTTCCCCCSHHHHHTTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCGGGT
T ss_pred             HHHHHCHHHHHHHhhhcceeeccCCCcCCCCCCCcHHHHhccceEeeeccccCchHHHHHHhhhhccCCCCceECCHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccCCCCCC----CcceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCce-eeeee-eccCC-C
Q 017257          227 QTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTK-TLEDN-W  299 (374)
Q Consensus       227 ~~~~~~~~f~p~~~~----~~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~-k~kTk-~v~~~-~  299 (374)
                      ...   ..|+|....    .+..+|+|+|++|++|+.          ..+||||+|++.|.|.|.. ++||+ ++++| +
T Consensus       659 ~~~---~~f~p~~~~~~~~~~~~~L~V~Visa~~L~~----------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~  725 (799)
T 2zkm_X          659 RPD---KQFNPFSVDRIDVVVATTLSITVISGQFLSE----------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSI  725 (799)
T ss_dssp             CTT---SCCCTTSCCTTTTTTCEEEEEEEEEEESCCS----------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCS
T ss_pred             CCC---ccCCCcccccccceeeeeEEEEEEeccccCc----------cCCCcEEEEEEEecCCCcccceeecccccCCCC
Confidence            864   368886432    246789999999999852          1479999999999888764 67999 88765 8


Q ss_pred             CCccCc-EEEE-EeecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          300 IPSWNE-EFEF-PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       300 nP~Wne-~f~F-~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+||| +|.| .|..|++++|+|.|||+|    ++|||++++||++|++|||||||+|..|+++.+++|||||+|
T Consensus       726 NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d----~d~iG~~~ipl~~L~~G~r~v~L~~~~g~~~~~~~Lfv~i~~  797 (799)
T 2zkm_X          726 NPVWKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM  797 (799)
T ss_dssp             SCBCCCCCEEEEEESSGGGCEEEEEEEETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred             CCeeecceEEEEEEccCCccEEEEEEEEeC----CCccceEeeehhhcCCCcEEEeccCCCCCCCCceEEEEEEEE
Confidence            999999 6999 899999999999999986    799999999999999999999999999999999999999987

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=100.00  E-value=2e-86  Score=704.92  Aligned_cols=325  Identities=28%  Similarity=0.447  Sum_probs=269.1

Q ss_pred             ChHHHhhccccCCCCCC-----CCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccc
Q 017257            1 MVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKS   75 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~~-----~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (374)
                      ||++||||+|+++|.+.     ...||||++||||||||+|+++.....                ++++.+..+      
T Consensus       431 ~~~~~~Gd~L~~~~~~~~~~~~~~~lpsP~~Lk~kIlik~K~~~~~~~~----------------~~~~~~~~~------  488 (816)
T 3qr0_A          431 YCNEAFGELLLDKPIDGHPLKPGVPLPTPYDLRKKILIKNKKMHKGTGD----------------DEELAGLTD------  488 (816)
T ss_dssp             HHHHHHGGGBCCSCCTTCCSSTTCCCCCTTTTTTCEEEECCCCC--------------------------CCCH------
T ss_pred             HHHHHhhhhhccCCccccccccCCcCCCHHHHcCCEEEEeCCCCCcCCC----------------ccccccccc------
Confidence            68999999999977432     379999999999999999998631100                000000000      


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhcccc
Q 017257           76 LNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGND  155 (374)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~  155 (374)
                           +++++..   .+.......+...++++|||+||+||++++|++|+.+....+ +++|+||||+++.+++++++.+
T Consensus       489 -----~~~~~~~---~~~~~~~~~~~~~~i~~eLs~Lv~y~~~v~f~~f~~~~~~~~-~~~~~S~sE~~~~~~~~~~~~~  559 (816)
T 3qr0_A          489 -----EEKKKIE---KEKKDAGTAAKEAEAAEEMSALVNYIQPVHFTTFEQAQKKDR-HYEMSSMVETQALNKLKDNPED  559 (816)
T ss_dssp             -----HHHHHHH---HHHHHHGGGGSCCCCCHHHHTTCSSSEECCCCCHHHHHHHTC-TTEEEEEEHHHHHHHHHHCHHH
T ss_pred             -----chhhccc---ccccccccccchhhhHHHHHHHHhhhCCcCCCCcccchhcCC-cceEecccHHHHHHHHHhhhHH
Confidence                 0000000   000000111234679999999999999999999998877655 5689999999999999999999


Q ss_pred             chhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCccc
Q 017257          156 IVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVF  235 (374)
Q Consensus       156 ~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f  235 (374)
                      |++||++||+||||+|+|+|||||||++||++|||||||||||+|++||||+|||+.||+|||||||++||...   ..|
T Consensus       560 ~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVALN~QT~d~~m~LN~g~F~~nG~cGYVLKP~~lr~~~---~~f  636 (816)
T 3qr0_A          560 FVDYNKKQITRIYPKGTRVDSSNYVPQIYWNAGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPEFMRKLD---KRF  636 (816)
T ss_dssp             HHHHTTTSCEEEECCTTCTTCCCCCTHHHHTTTCSEECBCTTCCSHHHHHHHHHTTTTTTCSEEECCHHHHCTT---CCC
T ss_pred             HHHhhhcccceeCCCccccCCCCCCchhhcccCceEEeecCcCCChhhhhhhhhhccCCceeeeecChHhcCCC---ccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999864   368


Q ss_pred             CCCCCCC----cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCc--eeeeeeeccCC-CCCccCcE-E
Q 017257          236 DPKVKLP----AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT--VMKKTKTLEDN-WIPSWNEE-F  307 (374)
Q Consensus       236 ~p~~~~~----~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~--~k~kTk~v~~~-~nP~Wne~-f  307 (374)
                      +|....+    .+.+|+|+||+|++|+.          ..+||||+|++.|.+.|.  .++||+++++| +||+|||+ |
T Consensus       637 ~p~~~~~~~~~~~~~L~V~Visaq~L~~----------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F  706 (816)
T 3qr0_A          637 DPFTESTVDGVVAGTIEIKIISAQFLSD----------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVF  706 (816)
T ss_dssp             CTTCCSCCTTSCCEEEEEEEEEEECCCS----------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCE
T ss_pred             CCCCCCCcCCccceEEEEEEEEcccCCC----------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCcee
Confidence            8865433    25789999999999852          136999999999998887  67899999876 89999998 9


Q ss_pred             EEE-eecCCccEEEEEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          308 EFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       308 ~F~-v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      .|. |..|++++|+|+|||++    ++|||++++||++|++|||||||+|.+|+++..++|||||.+
T Consensus       707 ~F~~v~~pela~Lrf~V~D~d----ddfiG~~~ipL~~L~~GyR~vpL~~~~g~~~~~atLfv~i~~  769 (816)
T 3qr0_A          707 VFKKVVLPDLAVVRIIVSEEN----GKFIGHRVMPLDGIKPGYRHVPLRNESNRPLGLASVFAHIVA  769 (816)
T ss_dssp             EEEEESCGGGCEEEEEEEETT----SCEEEEEEEESTTCCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred             EEccccCCCccEEEEEEEecC----CCeeeEEEEEHHHcCCcceEEEEeCCCCCCCCceEEEEEEEE
Confidence            998 88999999999999975    799999999999999999999999999999999999999986

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2e-85  Score=700.60  Aligned_cols=254  Identities=31%  Similarity=0.494  Sum_probs=231.9

Q ss_pred             ccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhccccceeeeecCCcccCCCCCCc
Q 017257          102 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNP  181 (374)
Q Consensus       102 ~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P  181 (374)
                      +.++++|||+||+||++++|++|+.+..... +++|+||+|+++.+++++++.+|++||++||+||||+|+|+|||||||
T Consensus       582 ~~~i~~eLS~LvvY~~~vkf~~f~~~~~~~~-~~~~~S~sE~k~~~~~~~~~~~~~~~n~~~l~RvYP~g~RidSSNy~P  660 (885)
T 3ohm_B          582 EVNATEEMSTLVNYIEPVKFKSFEAARKRNK-CFEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMP  660 (885)
T ss_dssp             CCCCCHHHHTTCSSCEECCCCCHHHHHHHTC-TTEEEEEEHHHHHHHHHHSHHHHHHHHHHSCEEEECCTTCTTCCCCCT
T ss_pred             cchhhHHHHhHHhhhcCccCCCcccccccCC-cceECCccHHHHHHHHHhCHHHHHHHhhccceeeccCccccCCCCCCc
Confidence            4578999999999999999999988765433 679999999999999999999999999999999999999999999999


Q ss_pred             cccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCCCC----CcceEEEEEEEecccc
Q 017257          182 LIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGW  257 (374)
Q Consensus       182 ~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~~~----~~~~~L~V~Visa~~l  257 (374)
                      ++||++|||||||||||+|++||||+|||+.||+|||||||++||...   ..|+|....    .++.+|+|+||+|++|
T Consensus       661 ~~~W~~G~QmVALN~QT~d~~m~lN~g~F~~nG~cGYVLKP~~lr~~~---~~f~p~~~~~~~~~~~~~L~V~Visaq~L  737 (885)
T 3ohm_B          661 QLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPD---KSFDPFTEVIVDGIVANALRVKVISGQFL  737 (885)
T ss_dssp             HHHHTTTCSEECBCTTCCSHHHHHHHHHHTTGGGCSEEECCGGGTCTT---CCCCTTCSSCCTTCCCEEEEEEEEEEESC
T ss_pred             hhhcccCceeeeecCCCCCcccchhhhhhccCCceeeeecCHHHcCCC---cCcCCCcCcccCcccceEEEEEEEEeccC
Confidence            999999999999999999999999999999999999999999999864   358885432    3467899999999998


Q ss_pred             ccCCCCCcccCCCCCCceEEEEEecCCCCce-eeeeeeccCC-CCCccCc-EEEEE-eecCCccEEEEEEEeeCCCCCCC
Q 017257          258 YYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKDD  333 (374)
Q Consensus       258 ~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~-k~kTk~v~~~-~nP~Wne-~f~F~-v~~pela~Lrf~V~D~d~~~~dd  333 (374)
                      +.          ..+||||+|++.|.+.|+. ++||+++++| +||+||| +|.|. |..|++++|+|+|||+|    ++
T Consensus       738 ~~----------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d----dd  803 (885)
T 3ohm_B          738 SD----------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG----GK  803 (885)
T ss_dssp             CS----------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT----TE
T ss_pred             cc----------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC----cc
Confidence            52          1379999999999988875 5799999876 9999999 69998 88999999999999986    79


Q ss_pred             ccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          334 FGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       334 ~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |||++++||++|++|||||||+|.+|+++..++|||||.+
T Consensus       804 fiG~~~lpL~~L~~GyR~vpL~~~~g~~l~~atLfv~i~~  843 (885)
T 3ohm_B          804 FVGHRILPVSAIRSGYHYVCLRNEANQPLCLPALLIYTEA  843 (885)
T ss_dssp             EEEEEEEETTTCCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred             EEeeEEEEHHHcCCCceEEEecCCCCCccCceEEEEEEEE
Confidence            9999999999999999999999999999999999999986

>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.79  E-value=9.6e-19  Score=147.95  Aligned_cols=118  Identities=21%  Similarity=0.283  Sum_probs=99.3

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC---CccEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p---ela~Lr  320 (374)
                      ...|.|+|++|++|+.      .+. +.+||||+|.+.+     .++||++++++.||+|||+|.|.+..+   ....|+
T Consensus         6 ~g~L~v~v~~a~~L~~------~~~-g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~   73 (140)
T 2dmh_A            6 SGMLRVIVESASNIPK------TKF-GKPDPIVSVIFKD-----EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLG   73 (140)
T ss_dssp             CCEEEEEEEEEESCCC------CSS-SCCCEEEEEECSS-----CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEE
T ss_pred             CcEEEEEEEEeeCCCC------CCC-CCCCeEEEEEECC-----EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEE
Confidence            4679999999999963      233 5689999999875     468999999999999999999999765   347899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCc------ceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~G------yR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |.|||+|..+++++||++.++|..|..|      |+++||.+..+... .++|.+++.|.
T Consensus        74 i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~-~G~l~l~~~~~  132 (140)
T 2dmh_A           74 IIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDT-GATIDLVIGYD  132 (140)
T ss_dssp             EEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEE-EEEEEEEEEEC
T ss_pred             EEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCC-CCEEEEEEEEE
Confidence            9999999888899999999999999876      45567998887654 46899999884

>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1

Probab=99.77  E-value=1.4e-18  Score=145.89  Aligned_cols=120  Identities=21%  Similarity=0.342  Sum_probs=101.3

Q ss_pred             cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEE
Q 017257          243 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE  322 (374)
Q Consensus       243 ~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~  322 (374)
                      ....|+|+|++|++|+.      .+..+.+||||+|.+.+     .++||++++++.||+|||+|.|.+..++ ..|+|+
T Consensus        11 ~~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~-~~l~i~   78 (133)
T 2ep6_A           11 DVGILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVT   78 (133)
T ss_dssp             CSEEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEE
T ss_pred             CceEEEEEEEeeECCCC------CCCCCCcCeEEEEEECC-----EEEEeeeecCCCCCccccEEEEEecCCC-CEEEEE
Confidence            35789999999999963      23456789999999965     4679999999999999999999997554 689999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |||+|..+++++||++.+++..+..|. ++.+|.+..++....+.|.+.+.|+
T Consensus        79 V~d~d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~  131 (133)
T 2ep6_A           79 VFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLI  131 (133)
T ss_dssp             EEEEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred             EEECCCCCCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEE
Confidence            999998878999999999999999887 5679988776655667899988873

>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A

Probab=99.77  E-value=7.8e-18  Score=144.59  Aligned_cols=124  Identities=26%  Similarity=0.356  Sum_probs=98.2

Q ss_pred             cceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC--ceeeeeeeccCCCCCccCcEEEEEeecCCccEEE
Q 017257          243 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR  320 (374)
Q Consensus       243 ~~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d--~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lr  320 (374)
                      ....|+|+|++|++|+.      .+..+.+||||+|.+.+. .+  ..++||++++++.||+|||+|.|.+..+ ...|+
T Consensus        18 ~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~   89 (153)
T 3b7y_A           18 NSRIVRVRVIAGIGLAK------KDILGASDPYVRVTLYDP-MNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLL   89 (153)
T ss_dssp             TCEEEEEEEEEEESCC-------------CCEEEEEEEEET-TTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEE
T ss_pred             CccEEEEEEEEeeCCCC------CCCCCCCCcEEEEEEECC-CCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEE
Confidence            45789999999999963      233467899999999852 22  3568999999999999999999998765 36899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc---------eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---------R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |+|||+|..+++++||++.++|..|..+.         +|.+|....+..-..+.|.+.+.|+
T Consensus        90 ~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~  152 (153)
T 3b7y_A           90 FEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL  152 (153)
T ss_dssp             EEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred             EEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence            99999998888999999999999997543         7889987655444567899999885

>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1

Probab=99.76  E-value=4.9e-18  Score=140.87  Aligned_cols=119  Identities=22%  Similarity=0.322  Sum_probs=93.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|+|+|++|++|+..   ...+..+.+||||+|.+.+.+  ..++||++++++.||+|||+|.|.+..++...|+|.||
T Consensus         3 ~~L~v~v~~a~~L~~~---~~~d~~g~~dpyv~v~~~~~~--~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~   77 (126)
T 1rlw_A            3 HKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM   77 (126)
T ss_dssp             EEEEEEEEEEESCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred             cEEEEEEEeeeCCCCC---CccccCCCCCCEEEEEEccCC--CceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEE
Confidence            5799999999999631   002334678999999997643  36789999999999999999999998778889999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |+|..+ +++||++.++|..|..|+++..+++-.+    .+++.|+|.+
T Consensus        78 d~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~----~~~g~i~~~l  121 (126)
T 1rlw_A           78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ----VTEMVLEMSL  121 (126)
T ss_dssp             ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEETT----TEEEEEEEEE
T ss_pred             ECCCCC-CceeEEEEEEHHHccCCCcEEEEEEcCC----CceEEEEEEE
Confidence            999774 8999999999999999987543333222    3456666654

>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A

Probab=99.75  E-value=1.3e-17  Score=139.67  Aligned_cols=118  Identities=17%  Similarity=0.294  Sum_probs=96.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|+|+|++|++|+.      .+..+.+||||+|.+.+.   ..++||++++++.||+|||+|.|.+..++  .|.|.||
T Consensus         5 ~~L~V~v~~a~~L~~------~d~~g~sDpyv~v~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~l~~~v~   73 (132)
T 3pyc_A            5 IKIRLTVLCAKNLAK------KDFFRLPDPFAKIVVDGS---GQCHSTDTVKNTLDPKWNQHYDLYVGKTD--SITISVW   73 (132)
T ss_dssp             EEEEEEEEEEESCCC------CSTTCCCCEEEEEEETTT---CCEEECCCCSSCSSCEEEEEEEEEEETTC--CEEEEEE
T ss_pred             EEEEEEEEEeECCCC------CCCCCCcCeEEEEEECCC---CceEECCccCCCCCCCccCEEEEEeCCCC--EEEEEEE
Confidence            579999999999853      244567899999999642   35789999999999999999999997765  3999999


Q ss_pred             eeCCCCC---CCccEEEEEECccc----cCcceEEEccCCCCC--ccCCeEEEEEEEE
Q 017257          325 EYDMSEK---DDFGGQTCLPVSEL----KQGIRAVPLHDRKGE--RYKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~---dd~iG~~~ipl~~L----~~GyR~vpL~d~~g~--~~~~~~L~v~i~f  373 (374)
                      |+|..++   ++|||++.+|+..|    ..|+++++|....+.  .-..+.|.|++..
T Consensus        74 d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~  131 (132)
T 3pyc_A           74 NHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT  131 (132)
T ss_dssp             EGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred             ECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence            9998765   79999999999998    778999999876432  2235688888764

>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*

Probab=99.74  E-value=3.9e-17  Score=139.38  Aligned_cols=118  Identities=27%  Similarity=0.380  Sum_probs=98.0

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.     ..+++|++++++.||+|||+|.|.+..++ ..|+|.|
T Consensus        16 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~-----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v   83 (148)
T 3kwu_A           16 SAKISITVVCAQGLQA------KDKTGSSDPYVTVQVG-----KTKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRV   83 (148)
T ss_dssp             CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEET-----TEEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEE
T ss_pred             ccEEEEEEEeeeCCCC------CCCCCCcCeEEEEEEC-----CEEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEE
Confidence            3689999999999963      2345678999999984     36789999999999999999999997765 6799999


Q ss_pred             EeeCCC-----------CCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEEEE
Q 017257          324 HEYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       324 ~D~d~~-----------~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+|..           +++++||++.+||..+..+. .|.+|....+.....+.|.+++.|
T Consensus        84 ~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~  145 (148)
T 3kwu_A           84 LDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISV  145 (148)
T ss_dssp             EECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEE
T ss_pred             EECCCCccccccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEE
Confidence            999975           67999999999999997665 578998665555455688888876

>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}

Probab=99.73  E-value=4.6e-17  Score=143.32  Aligned_cols=124  Identities=25%  Similarity=0.347  Sum_probs=96.3

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE  322 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~  322 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+.. ....|+|.
T Consensus         7 ~g~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~   79 (176)
T 3m7f_B            7 TRVVRVKVIAGIGLAK------KDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFE   79 (176)
T ss_dssp             CEEEEEEEEEEESCC---------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEE
T ss_pred             cEEEEEEEEEeeCCCC------cCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEE
Confidence            4689999999999963      234567899999999863221 146799999999999999999999874 34689999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcc---------eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~Gy---------R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |||++..++++|||++.++|..|..+.         ++.+|....+.....+.|.+.+.|+
T Consensus        80 V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~  140 (176)
T 3m7f_B           80 VFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL  140 (176)
T ss_dssp             EEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred             EEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEE
Confidence            999998888999999999999997652         6889987665555567899999885

>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2

Probab=99.70  E-value=7e-17  Score=135.74  Aligned_cols=116  Identities=22%  Similarity=0.332  Sum_probs=94.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeecc-CCCCCccCcEEEEEeecCCccEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIE  322 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~-~~~nP~Wne~f~F~v~~pela~Lrf~  322 (374)
                      ...|+|+|++|++|+.      .+..+.+||||+|.+.+     .++||++++ ++.||+|||+|.|.+.. ....|+|+
T Consensus         9 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~   76 (136)
T 1wfj_A            9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAK   76 (136)
T ss_dssp             EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEE
T ss_pred             cEEEEEEEEeccCCCC------cccCCCcCceEEEEECC-----ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEE
Confidence            5789999999999963      23456789999999865     357999998 78999999999999976 45789999


Q ss_pred             EEeeCCCCCCCccEEEEEECccc-cCc---ceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSEL-KQG---IRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L-~~G---yR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      |||++..+++++||++.++|..+ ..|   .++.+|. ..+.  ..+.|.+.+.|.
T Consensus        77 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~--~~G~i~l~l~~~  129 (136)
T 1wfj_A           77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE--YKGEIWVALSFK  129 (136)
T ss_dssp             ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE--EEEEEEEEEEEE
T ss_pred             EEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc--cCEEEEEEEEEE
Confidence            99999888899999999999999 555   4678887 3333  346788888773

>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}

Probab=99.69  E-value=8.3e-17  Score=135.55  Aligned_cols=105  Identities=19%  Similarity=0.202  Sum_probs=86.8

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eecCC--ccEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLRI  321 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~pe--la~Lrf  321 (374)
                      ..|.|+|++|++|+.       +..+.+||||+|.+.+......++||++++++.||+|||+|.|. +...+  ...|+|
T Consensus        20 ~~L~V~V~~a~~L~~-------~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~   92 (134)
T 2b3r_A           20 GTLFIMVMHIKDLVT-------EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQL   92 (134)
T ss_dssp             TEEEEEEEEEECCCC-------TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEE
T ss_pred             CEEEEEEEEeeCCCC-------CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEE
Confidence            579999999999963       23466899999999754434567899999999999999999999 76543  368999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcc---eEEEccC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD  356 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d  356 (374)
                      +|||+|..+++++||++.++|..+..|.   +|.+|.+
T Consensus        93 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~  130 (134)
T 2b3r_A           93 SVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA  130 (134)
T ss_dssp             EEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred             EEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence            9999998888999999999999998875   4566654

>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}

Probab=99.69  E-value=1.3e-17  Score=140.25  Aligned_cols=113  Identities=20%  Similarity=0.228  Sum_probs=92.9

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++  ..|.|
T Consensus        15 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~   88 (138)
T 3n5a_A           15 ANSIIVNIIKARNLKA------MDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIII   88 (138)
T ss_dssp             TTEEEEEEEEEESCCC------CBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEE
T ss_pred             CCeEEEEEEEeeCCCC------cCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEE
Confidence            3579999999999963      234567899999999875444567899999999999999999999877665  68999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcceE-EEccCCCCCcc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY  362 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~-vpL~d~~g~~~  362 (374)
                      +|||+|..+++++||++.+++.++..|+++ .+|.+..++++
T Consensus        89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~  130 (138)
T 3n5a_A           89 TVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPV  130 (138)
T ss_dssp             EEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCE
T ss_pred             EEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeE
Confidence            999999888899999999999998877754 46666655543

>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1

Probab=99.69  E-value=8.7e-17  Score=141.63  Aligned_cols=117  Identities=19%  Similarity=0.198  Sum_probs=93.9

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ...|.|+|++|++|+..     .+. +.+||||+|.+.+     .++||+++++++||+|||+|.|.+.  +...|.|+|
T Consensus        35 ~~~L~V~V~~A~~L~~~-----~~~-~~sDPYv~v~~~~-----~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V  101 (173)
T 2nq3_A           35 KSQLQITVISAKLKENK-----KNW-FGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRV  101 (173)
T ss_dssp             CEEEEEEEEEEEECCCC-------C-CCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEE
T ss_pred             ceEEEEEEEEeECCCCc-----ccC-CCCCeEEEEEECC-----EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEEE
Confidence            56799999999999621     122 2389999999965     6789999999999999999999884  367899999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcc--------eEEEccCCCCCccCCeEEEEEEEE
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGI--------RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy--------R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+|..++++|||++.++|..|..|+        .+++|....+.....+.|.|.+.+
T Consensus       102 ~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~  159 (173)
T 2nq3_A          102 WSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG  159 (173)
T ss_dssp             EECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred             EECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEee
Confidence            99998888999999999999987542        378887765444445688888765

>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2

Probab=99.68  E-value=1.1e-16  Score=137.41  Aligned_cols=105  Identities=23%  Similarity=0.281  Sum_probs=87.4

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|+|+|++|++|+.      .+..+.+||||+|.+..  .+..++||++++++.||+|||+|.|.+..+++  ..|+|
T Consensus        41 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i  112 (152)
T 1rsy_A           41 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM  112 (152)
T ss_dssp             TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEET--TCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred             CCEEEEEEEEeECCCC------ccCCCCcCeEEEEEEEc--CCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEE
Confidence            3579999999999963      23456789999999973  23457899999999999999999999876543  68999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcc---eEEEccC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHD  356 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d  356 (374)
                      +|||+|..+++++||++.++|..+..|.   +|.+|.+
T Consensus       113 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~  150 (152)
T 1rsy_A          113 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS  150 (152)
T ss_dssp             EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred             EEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence            9999998888999999999999998875   4667765

>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}

Probab=99.68  E-value=1.1e-16  Score=138.76  Aligned_cols=118  Identities=20%  Similarity=0.146  Sum_probs=90.9

Q ss_pred             cceEEEEEEEeccccccCCCC-C--ccc-CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccE
Q 017257          243 AKKTLKVTVYMGEGWYYDFPH-T--HFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL  318 (374)
Q Consensus       243 ~~~~L~V~Visa~~l~~~~~~-~--~~~-~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~  318 (374)
                      ....|+|+|+.|++|+..... .  .+. ..+.+||||+|.+.+    ....||++++++.||+|||+|.|.+..  ...
T Consensus        27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~----~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~  100 (157)
T 2fk9_A           27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ----VRVGQTSTKQKTNKPTYNEEFCANVTD--GGH  100 (157)
T ss_dssp             EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEE--ECE
T ss_pred             CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC----EeeEEeeecCCCCCCccCcEEEEEcCC--CCE
Confidence            357899999999999631000 0  000 124589999999854    234689999999999999999999864  358


Q ss_pred             EEEEEEeeCCCCCCCccEEEEEECccccCc-------ceEEEccCCCCCccCCeEEEEEEEE
Q 017257          319 LRIEVHEYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       319 Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G-------yR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.|+|||+|..++++|||++.|||..|..|       -.|++|..       .+.|.++++|
T Consensus       101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~-------~G~i~l~l~~  155 (157)
T 2fk9_A          101 LELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP-------EGKVFVVITL  155 (157)
T ss_dssp             EEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS-------SCEEEEEEEE
T ss_pred             EEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC-------CcEEEEEEEE
Confidence            999999999888899999999999998755       36788843       4578888887

>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1

Probab=99.67  E-value=2.3e-16  Score=132.93  Aligned_cols=115  Identities=17%  Similarity=0.189  Sum_probs=87.8

Q ss_pred             ceEEEEEEEeccccccCCCCCccc-------CCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFD-------AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL  316 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~-------~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel  316 (374)
                      ...|+|+|++|++|+..  .....       ..+.+||||+|.+.+    ....+|++++++.||+|||+|.|.+..+  
T Consensus         5 ~g~L~v~v~~a~~L~~~--d~~~~~~~g~~~~~~~~DPyv~v~l~~----~~~~~T~~~~~t~nP~WnE~f~f~v~~~--   76 (136)
T 1gmi_A            5 NGLLKIKICEAVSLKPT--AWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--   76 (136)
T ss_dssp             EEEEEEEEEEEESCCCC--HHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--
T ss_pred             ceEEEEEEEeCcCCCCc--ccccccccccccCCcCcCcEEEEEECC----eEeeeeeEECCCcCCccCCEEEEEecCC--
Confidence            36799999999999631  00000       012389999999854    2346899999999999999999998755  


Q ss_pred             cEEEEEEEeeCCCCCCCccEEEEEECccccCc-c----eEEEccCCCCCccCCeEEEEEEEE
Q 017257          317 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-I----RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       317 a~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G-y----R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ..|+|.|||+|..+++++||++.+||..+..+ +    .|++|.       +.+.|.+++.|
T Consensus        77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~i~l~l~~  131 (136)
T 1gmi_A           77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE-------PEGKVYVIIDL  131 (136)
T ss_dssp             CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB-------SSCEEEEEEEE
T ss_pred             CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC-------CCeEEEEEEEE
Confidence            78999999999888899999999999998763 2    345553       24578888876

>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A

Probab=99.67  E-value=2.3e-16  Score=133.67  Aligned_cols=100  Identities=24%  Similarity=0.403  Sum_probs=84.0

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~pel--a~Lr  320 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|. +...++  ..|+
T Consensus        28 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~  101 (142)
T 2chd_A           28 NSNLQCTIIRAKGLKP------MDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLR  101 (142)
T ss_dssp             GTEEEEEEEEEESCCC------CCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEE
T ss_pred             CCEEEEEEEEecCCCC------CCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEE
Confidence            4679999999999964      234567899999999864444568899999999999999999998 554443  6899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      |.|||++..+++++||++.++|..|..|.
T Consensus       102 i~V~d~d~~~~d~~iG~~~i~l~~l~~~~  130 (142)
T 2chd_A          102 ISVCDEDKFGHNEFIGETRFSLKKLKANQ  130 (142)
T ss_dssp             EEEEEECTTSCEEEEEEEEEEGGGCCTTC
T ss_pred             EEEEECCCCCCCcEEEEEEEEHHHcCCCC
Confidence            99999998888999999999999998765

>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A

Probab=99.67  E-value=5.6e-17  Score=141.39  Aligned_cols=111  Identities=22%  Similarity=0.273  Sum_probs=87.1

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCcc--EEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela--~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++.  .|+|
T Consensus        36 ~~~L~V~v~~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i  109 (166)
T 2cm5_A           36 QGGLIVGIIRCVHLAA------MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDI  109 (166)
T ss_dssp             TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred             CCEEEEEEEEeECCCC------ccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEE
Confidence            3579999999999963      2345678999999998654445678999999999999999999999766653  8999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcce-EEEccCCCCC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGE  360 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR-~vpL~d~~g~  360 (374)
                      .|||+|..+++++||++.+++.++..+++ |.+|.+..++
T Consensus       110 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~  149 (166)
T 2cm5_A          110 SVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDK  149 (166)
T ss_dssp             EEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTC
T ss_pred             EEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCC
Confidence            99999988889999999999999765543 2344443333

>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A

Probab=99.67  E-value=3.7e-17  Score=140.40  Aligned_cols=112  Identities=19%  Similarity=0.150  Sum_probs=87.0

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++  ..|+|
T Consensus        29 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v  102 (153)
T 1w15_A           29 TNTLTVVVLKARHLPK------SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEF  102 (153)
T ss_dssp             TTEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEE
T ss_pred             CCEEEEEEEEeECCCC------cCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEE
Confidence            3579999999999963      233456899999999753322346799999999999999999999887765  68999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcce-EEEccCCCCCc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGER  361 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR-~vpL~d~~g~~  361 (374)
                      +|||+|..+++++||++.+++.+...|++ |.+|.+..+++
T Consensus       103 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~p~~~  143 (153)
T 1w15_A          103 LVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQ  143 (153)
T ss_dssp             EEEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCC
T ss_pred             EEEeCCCCCCCcEEEEEEECCCCCchHHHHHHHHHhCCCCe
Confidence            99999988889999999999999776664 34565544444

>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2

Probab=99.67  E-value=2.8e-16  Score=132.63  Aligned_cols=112  Identities=17%  Similarity=0.243  Sum_probs=89.5

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEe-ecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v-~~pel--a~Lr  320 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+ ...++  ..|+
T Consensus        20 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~   93 (141)
T 1v27_A           20 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE   93 (141)
T ss_dssp             TTEEEEEEEEEESCCC------CSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEE
T ss_pred             CCEEEEEEEEccCCCC------cCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEE
Confidence            3579999999999963      2345678999999987544445678999999999999999999995 33333  6899


Q ss_pred             EEEEeeCCCCC--CCccEEEEEECccccC-c-ceEEEccCCCCCc
Q 017257          321 IEVHEYDMSEK--DDFGGQTCLPVSELKQ-G-IRAVPLHDRKGER  361 (374)
Q Consensus       321 f~V~D~d~~~~--dd~iG~~~ipl~~L~~-G-yR~vpL~d~~g~~  361 (374)
                      |+|||++..++  +++||++.++|..+.. + -+|.+|.+....+
T Consensus        94 i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~~~g~  138 (141)
T 1v27_A           94 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDSGP  138 (141)
T ss_dssp             EEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCCSSCC
T ss_pred             EEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECcccccCC
Confidence            99999998876  8999999999999754 2 3688998765443

>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2

Probab=99.66  E-value=2.9e-16  Score=134.33  Aligned_cols=107  Identities=26%  Similarity=0.421  Sum_probs=89.3

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V  323 (374)
                      ..|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++ ..|+|+|
T Consensus        31 ~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V  104 (149)
T 1a25_A           31 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI  104 (149)
T ss_dssp             SEEEEEEEEEESCCC------CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred             CEEEEEEEEeeCCCC------CCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEE
Confidence            469999999999963      234567899999999865444567899999999999999999999876544 5899999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcc--eEEEccCC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDR  357 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy--R~vpL~d~  357 (374)
                      ||+|..+++++||++.++|..|..+-  +|.+|.+.
T Consensus       105 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~  140 (149)
T 1a25_A          105 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ  140 (149)
T ss_dssp             EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBCH
T ss_pred             EECCCCCCCCEEEEEEEEHHHhCcCccCCeEEccCC
Confidence            99998888999999999999997653  46788764

>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*

Probab=99.66  E-value=1.1e-16  Score=138.32  Aligned_cols=102  Identities=20%  Similarity=0.273  Sum_probs=84.3

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++  ..|+|
T Consensus        24 ~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i   97 (159)
T 1tjx_A           24 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV   97 (159)
T ss_dssp             TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEE
T ss_pred             CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEE
Confidence            3579999999999963      234567899999999763333457899999999999999999999876654  47999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcceE
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA  351 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~  351 (374)
                      .|||+|..+++++||++.+++.++..|++|
T Consensus        98 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~  127 (159)
T 1tjx_A           98 TVLDYDKIGKNDAIGKVFVGYNSTGAELRH  127 (159)
T ss_dssp             EEEECCSSSCCEEEEEEEEETTCCHHHHHH
T ss_pred             EEEECCCCCCCceEEEEEECCCCCCcHHHH
Confidence            999999888899999999999987666554

>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}

Probab=99.66  E-value=1.7e-16  Score=135.61  Aligned_cols=113  Identities=18%  Similarity=0.227  Sum_probs=89.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+..     ....+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++  ..|+|
T Consensus        22 ~~~L~V~v~~a~~L~~~-----d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~   96 (148)
T 3fdw_A           22 TQSLVVHVKECHQLAYA-----DEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQF   96 (148)
T ss_dssp             TTEEEEEEEEEESCCCS-----BTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEE
T ss_pred             CCEEEEEEEEecCCCCc-----ccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEE
Confidence            35799999999999631     113456899999999754444557899999999999999999999877665  47999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCCc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGER  361 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~~  361 (374)
                      .|||+|..+++++||++.+||..+..+.   .|.+|..+.+..
T Consensus        97 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~~  139 (148)
T 3fdw_A           97 SVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAE  139 (148)
T ss_dssp             EEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC----
T ss_pred             EEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccccc
Confidence            9999998888999999999999997553   578997765543

>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*

Probab=99.66  E-value=2.7e-16  Score=133.34  Aligned_cols=104  Identities=23%  Similarity=0.274  Sum_probs=86.2

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+..  .+..++||++++++.||+|||+|.|.+..+++  ..|+|
T Consensus        33 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i  104 (143)
T 3f04_A           33 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLP--DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM  104 (143)
T ss_dssp             TTEEEEEEEEEECCCC------BGGGBCCCEEEEEEEES--CCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred             CCEEEEEEEEecCCCC------CCCCCCcCcEEEEEEEC--CCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEE
Confidence            4679999999999863      23455789999999963  23457899999999999999999999876554  68999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcce---EEEcc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLH  355 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~  355 (374)
                      +|||+|..+++++||++.++|..+..|..   |.+|.
T Consensus       105 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~  141 (143)
T 3f04_A          105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ  141 (143)
T ss_dssp             EEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred             EEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence            99999988889999999999999988753   55654

>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}

Probab=99.66  E-value=1.6e-16  Score=137.44  Aligned_cols=97  Identities=20%  Similarity=0.239  Sum_probs=81.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr  320 (374)
                      ...|+|+|+.|++|+.      .+..+.+||||+|.+.+...+ ..++||+++++++||+|||+|.|.+...++  ..|+
T Consensus        42 ~~~L~V~Vi~a~~L~~------~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~  115 (155)
T 2z0u_A           42 NKQFAILIIQLSNLSA------LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLR  115 (155)
T ss_dssp             TTEEEEEEEEEECGGG------TCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEE
T ss_pred             CCEEEEEEEEccCcCC------cccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEE
Confidence            3579999999999964      234567899999999754333 247899999999999999999999876543  5799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECcccc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      |+|||+|..+++++||++.++|.++.
T Consensus       116 ~~V~d~d~~~~~d~iG~~~i~l~~l~  141 (155)
T 2z0u_A          116 VDVCTTDRSHLEECLGGAQISLAEVC  141 (155)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECTTSC
T ss_pred             EEEEECCCCCCCcEEEEEEEEHHHcc
Confidence            99999999889999999999999995

>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=3.2e-16  Score=132.77  Aligned_cols=110  Identities=18%  Similarity=0.249  Sum_probs=86.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+ +||||+|.+.+......++||++++++.||+|||+|.|.+...++  ..|+|
T Consensus        23 ~~~L~v~v~~a~~L~~------~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i   95 (142)
T 2dmg_A           23 RNKLIVVVHACRNLIA------FSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDV   95 (142)
T ss_dssp             TTEEEEEEEEEECCCC------SSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEE
T ss_pred             CCEEEEEEEEeECCCC------CCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEE
Confidence            3579999999999963      23345 899999999754433467899999999999999999999865544  38999


Q ss_pred             EEEeeCCCCC--CCccEEEEEECccccCcc---eEEEccCCCCC
Q 017257          322 EVHEYDMSEK--DDFGGQTCLPVSELKQGI---RAVPLHDRKGE  360 (374)
Q Consensus       322 ~V~D~d~~~~--dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~  360 (374)
                      +|||+|..+.  +++||++.++|..+..+-   .|.+|.+..+.
T Consensus        96 ~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~  139 (142)
T 2dmg_A           96 AVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP  139 (142)
T ss_dssp             EEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred             EEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence            9999997653  579999999999986542   46677765443

>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2

Probab=99.65  E-value=1.4e-15  Score=128.61  Aligned_cols=106  Identities=20%  Similarity=0.202  Sum_probs=85.4

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|+|+|+.|+.         .+..+.+||||+|.+... ....++||+++++++||+|||+|.|.+...++  ..|+|
T Consensus        25 ~~~L~V~v~~a~~---------~d~~g~sDPyv~v~l~~~-~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~   94 (138)
T 1wfm_A           25 KAELFVTRLEAVT---------SNHDGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTL   94 (138)
T ss_dssp             TTEEEEEEEEEEC---------CCCSSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEE
T ss_pred             CCEEEEEEEEEEc---------CCCCCCcceEEEEEEEcC-CCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEE
Confidence            3579999999983         133567899999999641 12346899999999999999999999876664  58999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCc---ceEEEccCCCC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG  359 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g  359 (374)
                      .|||+|..+++++||++.++|..+..+   -.|.+|.....
T Consensus        95 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~~  135 (138)
T 1wfm_A           95 TLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP  135 (138)
T ss_dssp             EEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred             EEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCCc
Confidence            999999888899999999999999643   35778876543

>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2

Probab=99.65  E-value=8.4e-16  Score=129.60  Aligned_cols=98  Identities=21%  Similarity=0.357  Sum_probs=81.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCC-CCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eecCCc--cEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALL  319 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~-s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~pel--a~L  319 (374)
                      ...|.|+|++|++|+.      .+.. +.+||||+|.+.+.  ...++||++++++.||+|||+|.|. +...++  ..|
T Consensus        21 ~~~L~v~v~~a~~L~~------~d~~~~~~dpyv~v~~~~~--~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l   92 (138)
T 1ugk_A           21 RKAFVVNIKEARGLPA------MDEQSMTSDPYIKMTILPE--KKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL   92 (138)
T ss_dssp             GTEEEEEEEEEESCCC------CBTTTTBCEEEEEEEEETT--TCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred             CCEEEEEEEEeeCCCC------CCCCCCCCCCEEEEEEecC--CCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEE
Confidence            4579999999999963      2332 56899999999742  3467899999999999999999996 665554  589


Q ss_pred             EEEEEeeCCCCCCCccEEEEEECccccCcc
Q 017257          320 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI  349 (374)
Q Consensus       320 rf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy  349 (374)
                      +|+|||+|..+++++||++.++|..|..+.
T Consensus        93 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~  122 (138)
T 1ugk_A           93 HFTILSFDRFSRDDIIGEVLIPLSGIELSE  122 (138)
T ss_dssp             EEEEEEECSSCCCCCCEEEEEECTTCCCTT
T ss_pred             EEEEEECCCCCCCcEEEEEEEehhHccCCC
Confidence            999999998888999999999999998653

>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.65  E-value=6.9e-16  Score=130.64  Aligned_cols=106  Identities=21%  Similarity=0.243  Sum_probs=85.5

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecC---CccEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~p---ela~Lr  320 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+  .+..++||++++++.||+|||+|.|.+..+   ....|+
T Consensus        25 ~~~L~v~v~~a~~L~~------~d~~g~~dpyv~v~~~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~   96 (141)
T 2d8k_A           25 ESTLTVKIMKAQELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILY   96 (141)
T ss_dssp             SCCEEEEEEEEESCCC------CSSSSCCCEEEEEEEES--CCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEE
T ss_pred             CCEEEEEEEEeECCCC------CCCCCCCCcEEEEEEEC--CCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEE
Confidence            3579999999999964      23456789999999974  234578999999999999999999985322   236899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCC
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR  357 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~  357 (374)
                      |+|||+|..+++++||++.++|..|..|.   +|.+|...
T Consensus        97 i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~  136 (141)
T 2d8k_A           97 LQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS  136 (141)
T ss_dssp             EEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred             EEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence            99999998888999999999999998875   46676543

>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2

Probab=99.64  E-value=1.2e-16  Score=135.22  Aligned_cols=109  Identities=19%  Similarity=0.305  Sum_probs=88.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC---------ceeeeeeeccCCCCCccCcEEEEE-eecC
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFP-LSVP  314 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d---------~~k~kTk~v~~~~nP~Wne~f~F~-v~~p  314 (374)
                      ..|.|+|++|++|+.      .+..+.+||||+|.+.+....         ..++||++++++.||+|||+|.|. +...
T Consensus        18 ~~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~   91 (142)
T 1rh8_A           18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME   91 (142)
T ss_dssp             TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred             CEEEEEEEEecCCCC------CCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHH
Confidence            469999999999963      234567899999999864322         235799999999999999999997 6543


Q ss_pred             C--ccEEEEEEEeeCCCCCCCccEEEEEECccccCc---ceEEEccCCCC
Q 017257          315 E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG  359 (374)
Q Consensus       315 e--la~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g  359 (374)
                      +  ...|.|.|||+|..+++++||++.++|..+..+   -+|.+|.+..+
T Consensus        92 ~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~  141 (142)
T 1rh8_A           92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTE  141 (142)
T ss_dssp             HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCCC
T ss_pred             HccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccCC
Confidence            2  358999999999888899999999999998754   47889987654

>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0

Probab=99.63  E-value=8.7e-16  Score=132.07  Aligned_cols=109  Identities=18%  Similarity=0.196  Sum_probs=88.2

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE  322 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~  322 (374)
                      ...|.|+|++|++|+.      .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus        26 ~~~L~V~v~~a~~L~~------~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~   98 (153)
T 3fbk_A           26 DRVLLLHIIEGKGLIS------KQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVT   98 (153)
T ss_dssp             SSEEEEEEEEEESCCC------CS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEE
T ss_pred             CCEEEEEEEEeeCCCC------CC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEE
Confidence            4679999999999963      12 356899999999865545667899999999999999999999854443 569999


Q ss_pred             EEeeCCCCC-CCccEEEEEECccccC-cc---eEEEccCCCC
Q 017257          323 VHEYDMSEK-DDFGGQTCLPVSELKQ-GI---RAVPLHDRKG  359 (374)
Q Consensus       323 V~D~d~~~~-dd~iG~~~ipl~~L~~-Gy---R~vpL~d~~g  359 (374)
                      |||+|..++ ++|||++.++|.+|.. +-   .|.+|.+...
T Consensus        99 V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~  140 (153)
T 3fbk_A           99 VWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL  140 (153)
T ss_dssp             EEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred             EEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence            999998766 8999999999999974 32   5778877553

>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2

Probab=99.62  E-value=1.7e-15  Score=126.00  Aligned_cols=105  Identities=18%  Similarity=0.238  Sum_probs=79.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeec-CC--ccEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PE--LALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~-pe--la~Lr  320 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+.. .+  ...|+
T Consensus        17 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~   90 (129)
T 2bwq_A           17 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE   90 (129)
T ss_dssp             TTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred             CCEEEEEEEEeeCCCC------CCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEE
Confidence            3579999999999963      234566899999999764444678899999999999999999999532 22  36899


Q ss_pred             EEEEeeCCCCC--CCccEEEEEECccccC-cc-eEEEc
Q 017257          321 IEVHEYDMSEK--DDFGGQTCLPVSELKQ-GI-RAVPL  354 (374)
Q Consensus       321 f~V~D~d~~~~--dd~iG~~~ipl~~L~~-Gy-R~vpL  354 (374)
                      |+|||+|..++  +++||++.++|..+.. |. +|.+|
T Consensus        91 ~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L  128 (129)
T 2bwq_A           91 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL  128 (129)
T ss_dssp             EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred             EEEEECCcCcCcCCceeEEEEEEccccCCCcCCccEEC
Confidence            99999998876  8999999999998753 32 35555

>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.7e-15  Score=129.09  Aligned_cols=110  Identities=15%  Similarity=0.160  Sum_probs=84.6

Q ss_pred             ceEEEEEEEeccccccC-CCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYD-FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~-~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lr  320 (374)
                      ...|.|+|++|++|+.. ......+..+.+||||+|.+...  ...++||++++++.||+|||+|.|.+..+++  ..|+
T Consensus        25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~--~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~  102 (147)
T 2enp_A           25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPD--QKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL  102 (147)
T ss_dssp             TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETC--CSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred             CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeC--CCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence            35799999999999641 00000122457899999999742  2357899999999999999999999876554  3899


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcc---eEEEcc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH  355 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~  355 (374)
                      |+|||+|..+++++||++.++|..+..+-   .|.+|.
T Consensus       103 ~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~  140 (147)
T 2enp_A          103 LTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI  140 (147)
T ss_dssp             EEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred             EEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence            99999998888999999999999986543   344554

>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}

Probab=99.62  E-value=9.5e-16  Score=134.45  Aligned_cols=107  Identities=21%  Similarity=0.184  Sum_probs=86.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccC-CCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~-~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ..|.|+|++|++|+.      .+. .+.+||||+|.+.+......++||+++++++||+|||+|.|.+.. +...|+|+|
T Consensus        30 ~~L~V~v~~a~~L~~------~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V  102 (171)
T 2q3x_A           30 GQLEVEVIRARSLTQ------KPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIV  102 (171)
T ss_dssp             TEEEEEEEEEESCCC------CC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEE
T ss_pred             CEEEEEEEEeeCCCC------CCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEE
Confidence            569999999999963      122 466899999999864333357899999999999999999999854 457899999


Q ss_pred             E-eeCCCCCCCccEEEEEECccccCcc---eEEEccCCC
Q 017257          324 H-EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK  358 (374)
Q Consensus       324 ~-D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~  358 (374)
                      | |+|..+++++||++.++|..+..|.   +|.+|....
T Consensus       103 ~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~  141 (171)
T 2q3x_A          103 WGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS  141 (171)
T ss_dssp             EEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred             EEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence            9 9998888999999999999997653   577886543

>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2

Probab=99.59  E-value=1.5e-14  Score=136.22  Aligned_cols=122  Identities=21%  Similarity=0.263  Sum_probs=95.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+.  +..+++|++++++.||+|||+|.|.+..+++  ..|+|
T Consensus        18 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~--~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~   89 (284)
T 2r83_A           18 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVM   89 (284)
T ss_dssp             TTEEEEEEEEEECCCC------CSSSSSCCEEEEEEEETC--TTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEE
T ss_pred             CCEEEEEEEEeeCCCC------CCCCCCCCeEEEEEEEcC--CCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEE
Confidence            3579999999999963      234567899999999742  2346789999999999999999999876654  68999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCCCC-ccCCeEEEEEEEE
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEF  373 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~g~-~~~~~~L~v~i~f  373 (374)
                      .|||+|..+++++||++.++|..+..|.   .|.+|.+..+. ....+.|.+.+.|
T Consensus        90 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~  145 (284)
T 2r83_A           90 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRY  145 (284)
T ss_dssp             EEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEE
T ss_pred             EEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEe
Confidence            9999998888999999999999998764   46788776442 2223456655544

>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}

Probab=99.58  E-value=7.1e-15  Score=123.83  Aligned_cols=113  Identities=19%  Similarity=0.242  Sum_probs=96.2

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeecc-CCCCCccCcEEEEEeecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~-~~~nP~Wne~f~F~v~~pel--a~Lr  320 (374)
                      .+-|+|.|.+|.+|+           +.+|||++|.+-|     .++||++++ ++.||+|||.|+|++..+-.  .+|.
T Consensus        20 ~msL~V~l~~a~~Lp-----------g~~Dp~akv~FRg-----~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~   83 (144)
T 3l9b_A           20 HMALIVHLKTVSELR-----------GRADRIAKVTFRG-----QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLE   83 (144)
T ss_dssp             CEEEEEEEEEEESCC-----------SCEEEEEEEEETT-----EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEE
T ss_pred             cEEEEEEEEEecCCC-----------CCCCCeEEEEEec-----cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEE
Confidence            467999999999985           2479999999975     689999998 57999999999999976533  6999


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcce---EEEccCCCCCccCCeEEEEEEEE
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.|+|++..+++.+||++++||..|..+-+   ..+|.|.+++++. ++|.+.+.|
T Consensus        84 v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~-a~I~l~l~Y  138 (144)
T 3l9b_A           84 IQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIK-TSLSMEVRY  138 (144)
T ss_dssp             EEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEE-EEEEEEEEE
T ss_pred             EEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccc-cEEEEEEEe
Confidence            999999999999999999999999875543   3599999999976 688877765

>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1

Probab=99.55  E-value=3.5e-14  Score=119.20  Aligned_cols=112  Identities=21%  Similarity=0.217  Sum_probs=79.8

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeecc-CCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~-~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ..|+|+|+.|++++.         .+.+||||+|.  +     ...||++++ ++.||+|||+|.|.+..++. .|+|+|
T Consensus         5 ~~L~V~V~~A~~l~~---------~g~~DPYv~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~V   67 (131)
T 2cjt_A            5 SLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVKSTTIAVRGSQPSWEQDFMFEINRLDL-GLTVEV   67 (131)
T ss_dssp             EEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEEECCCSS-EEEEEE
T ss_pred             eEEEEEEEEeECCCC---------CCCcCeEEEEE--e-----cCEEEeEecCCCCCceECCEEEEEEeCCCC-eEEEEE
Confidence            579999999997631         24579999999  2     234666665 57999999999999976554 599999


Q ss_pred             EeeCCCCCCCccEEEEEECccccC----c-ceEEEcc----CCCCCc----c-CCeEEEEEEEEC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQ----G-IRAVPLH----DRKGER----Y-KSVKLLMHFEFI  374 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~----G-yR~vpL~----d~~g~~----~-~~~~L~v~i~f~  374 (374)
                      ||+| .++|++||++.+||..+..    | +++.|+.    ..+|+.    . ....|++.+.|.
T Consensus        68 ~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~~  131 (131)
T 2cjt_A           68 WNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE  131 (131)
T ss_dssp             EECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred             EECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEeC
Confidence            9999 7789999999999999842    3 2454443    233332    2 234688877763

>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A

Probab=99.52  E-value=5.1e-14  Score=133.88  Aligned_cols=122  Identities=22%  Similarity=0.266  Sum_probs=92.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCcc--EEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela--~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.  +....++||++++++.||+|||+|.|.+..+++.  .|+|
T Consensus        19 ~~~L~v~v~~a~~L~~------~d~~g~~dPyv~v~l~--~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~   90 (296)
T 1dqv_A           19 SDQLVVRILQALDLPA------KDSNGFSDPYVKIYLL--PDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF   90 (296)
T ss_dssp             SCEEEEEEEEEECCCC------CSTTSCCCEEEEEECT--TSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred             CCEEEEEEEEeECCCC------cCCCCCcCeEEEEEEE--cCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEE
Confidence            3579999999999963      2345678999999985  3334678999999999999999999998766654  8999


Q ss_pred             EEEeeCCCCCCCccEEEEEE-Ccccc---Cc-ceEEEccCCCCCccCCeEEEEEEEE
Q 017257          322 EVHEYDMSEKDDFGGQTCLP-VSELK---QG-IRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ip-l~~L~---~G-yR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      .|||+|..+++++||++.++ +..+.   .+ ..|.+|....+.....+.|.+.+.|
T Consensus        91 ~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y  147 (296)
T 1dqv_A           91 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCY  147 (296)
T ss_dssp             EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEE
T ss_pred             EEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEe
Confidence            99999988889999999996 43332   22 3467887655544444566665554

>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2

Probab=99.51  E-value=2.4e-14  Score=134.83  Aligned_cols=102  Identities=20%  Similarity=0.273  Sum_probs=83.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|++|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..+++  ..|+|
T Consensus       149 ~~~l~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i  222 (284)
T 2r83_A          149 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV  222 (284)
T ss_dssp             TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEE
T ss_pred             CCceEEEEEEeECCCC------cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEE
Confidence            3579999999999963      234567899999999753333356799999999999999999999987765  47999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcceE
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA  351 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~  351 (374)
                      +|||+|..+++++||++.+++.++..|++|
T Consensus       223 ~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~  252 (284)
T 2r83_A          223 TVLDYDKIGKNDAIGKVFVGYNSTGAELRH  252 (284)
T ss_dssp             EEEECCSSSCCCEEEEEEEETTCCHHHHHH
T ss_pred             EEEeCCCCCCCcEEEEEEECCCCCCcHHHH
Confidence            999999988899999999999987655443

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B

Probab=99.50  E-value=8.5e-14  Score=141.65  Aligned_cols=114  Identities=21%  Similarity=0.339  Sum_probs=93.1

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ...|+|+|++|++|+.      .+..+.+||||+|.+.+     .+++|++++++.||+|||+|.|.+..+....|+|.|
T Consensus       386 ~~~l~v~v~~a~~L~~------~d~~~~sdpyv~v~~~~-----~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v  454 (510)
T 3jzy_A          386 IGRLMVHVIEATELKA------CKPNGKSNPYCEISMGS-----QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTL  454 (510)
T ss_dssp             CEEEEEEEEEEESCCC------CSTTSCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEE
T ss_pred             CceEEEEeceeecCCC------CCCCCCCCeEEEEEECC-----eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence            3579999999999853      23456789999999843     578999999999999999999999877778899999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcc-------eEEEccCCCCCccCCeEEEEEEEE
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGI-------RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy-------R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+|..++++|||++.+||+.|..|.       .+++|...     ..+.|.|.+++
T Consensus       455 ~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~-----~~G~i~l~~~l  506 (510)
T 3jzy_A          455 FDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV-----PTGEVWVRFDL  506 (510)
T ss_dssp             EECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS-----SSCEEEEEEEE
T ss_pred             EeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC-----CCceEEEEEEE
Confidence            99999888999999999999998653       46777643     23456666553

>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1

Probab=99.49  E-value=6.9e-14  Score=122.34  Aligned_cols=84  Identities=20%  Similarity=0.225  Sum_probs=69.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeecc-CCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~-~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ..|.|+|+.|++++.         .+.+||||+|.  +     ...||++++ ++.||+|||+|.|.+..++. .|.|+|
T Consensus        14 ~~L~V~V~~A~~l~~---------~g~~DPYV~v~--~-----~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~-~L~~~V   76 (167)
T 2cjs_A           14 SLLCVGVKKAKFDGA---------QEKFNTYVTLK--V-----QNVESTTIAVRGSQPSWEQDFMFEINRLDL-GLTVEV   76 (167)
T ss_dssp             CEEEEEEEEEECSSC---------GGGCEEEEEEE--E-----TTEEEECCCEESSSCEEEEEEEEECCCTTS-EEEEEE
T ss_pred             EEEEEEEEEEECCCC---------CCCCCeEEEEE--e-----cceEEEEecCCCCCCCCCCEEEEEeeCCCC-EEEEEE
Confidence            579999999997631         24579999999  2     245777776 57999999999999986554 699999


Q ss_pred             EeeCCCCCCCccEEEEEECcccc
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      ||+| .++|++||++.|||..+.
T Consensus        77 ~D~d-~~~dd~iG~~~i~L~~l~   98 (167)
T 2cjs_A           77 WNKG-LIWDTMVGTVWIPLRTIR   98 (167)
T ss_dssp             EECC-SSCCEEEEEEEEEGGGSC
T ss_pred             EECC-CCCCceEEEEEEEHHHhc
Confidence            9999 778999999999999984

>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A

Probab=99.45  E-value=4.5e-14  Score=149.04  Aligned_cols=107  Identities=24%  Similarity=0.370  Sum_probs=89.1

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ...|+|+|++|++|+..   ...+..+.+||||+|.+.+.+  ..++||+++++++||+|||+|.|.+..++...|+|+|
T Consensus        17 ~g~L~V~Vi~A~nL~~~---~~~D~~g~sDPYV~V~l~~~~--~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V   91 (749)
T 1cjy_A           17 SHKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITL   91 (749)
T ss_dssp             CEEEEEEEEEEECCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEE
T ss_pred             ccEEEEEEEEEECCCCc---cccCCCCCcCeEEEEEEecCC--CCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEE
Confidence            56899999999999530   002345678999999997643  3578999999999999999999999887778999999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcce---EEEccC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD  356 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d  356 (374)
                      ||+|..+ +++||+++++|.+|..|++   |.+|..
T Consensus        92 ~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~  126 (749)
T 1cjy_A           92 MDANYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQ  126 (749)
T ss_dssp             EECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred             EECCCCC-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence            9999888 9999999999999999874   556643

>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}

Probab=99.42  E-value=1.9e-12  Score=132.53  Aligned_cols=88  Identities=23%  Similarity=0.287  Sum_probs=76.3

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEee-cCCccEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLS-VPELALLRIE  322 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~-~pela~Lrf~  322 (374)
                      ...|+|+|+.|++|+.       |..+.+||||+|.+.+     .++||++++++.||+|||+|.|.+. .+....|+|+
T Consensus       393 ~~~L~V~V~~A~~L~~-------D~~g~sDPYV~v~l~~-----~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~  460 (540)
T 3nsj_A          393 LAHLVVSNFRAEHLWG-------DYTTATDAYLKVFFGG-----QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQ  460 (540)
T ss_dssp             EEEEEEEEEEEESCCC-------SSCSCCCEEEEEEETT-----EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEE
T ss_pred             ccEEEEEEEEccCCCc-------ccCCCcCeEEEEEECC-----EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEE
Confidence            4689999999999852       4567789999999964     4689999999999999999999864 4456789999


Q ss_pred             EEeeCCCCCCCccEEEEEECc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVS  343 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~  343 (374)
                      |||+|..++|||||++.++|.
T Consensus       461 V~D~D~~~~dD~LG~~~~~L~  481 (540)
T 3nsj_A          461 VWDADYGWDDDLLGSCDRSPH  481 (540)
T ss_dssp             EEECCSSSCCEEEEEEEECCC
T ss_pred             EEECCCCCCCCEEEEEEEEee
Confidence            999998888999999999988

>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A

Probab=99.36  E-value=7.1e-14  Score=132.85  Aligned_cols=98  Identities=18%  Similarity=0.218  Sum_probs=80.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|+.|++|+.      .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+++  ..|.|
T Consensus       151 ~~~l~v~v~~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i  224 (296)
T 1dqv_A          151 AGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI  224 (296)
T ss_dssp             TTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred             cceeEEEEEEeecCCc------cCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEE
Confidence            3579999999999853      234566799999999742223457899999999999999999999876654  46999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQ  347 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~  347 (374)
                      +|||+|..+++++||++.|++.++..
T Consensus       225 ~V~d~d~~~~~~~iG~~~i~l~~~~~  250 (296)
T 1dqv_A          225 AVVDYDCIGHNEVIGVCRVGPEAADP  250 (296)
T ss_dssp             EEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred             EEEeCCCCCCCceEEEEEECCccCCc
Confidence            99999998889999999999998754

>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}

Probab=99.14  E-value=3.9e-12  Score=129.04  Aligned_cols=99  Identities=19%  Similarity=0.300  Sum_probs=10.2

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCC---CCCccCcEEEEEeecCCccEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN---WIPSWNEEFEFPLSVPELALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~---~nP~Wne~f~F~v~~pela~Lr  320 (374)
                      ...|+|+|+.|++|+.    .  +     ||||++.+.+    ....||++++++   .||+|||+|.|.+. +....|.
T Consensus        10 ~~~L~V~VieAk~L~~----~--d-----dpYv~v~l~~----~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~   73 (483)
T 3bxj_A           10 DNVLKLWIIEARELPP----K--K-----RYYCELCLDD----MLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALR   73 (483)
T ss_dssp             EECC------------------------------------------------------------CCEECC----------
T ss_pred             ccEEEEEEEEcCCcCC----C--C-----CCeEEEEECC----eEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEE
Confidence            3569999999999853    1  1     8999999865    235689999988   99999999999974 3467899


Q ss_pred             EEEEee-C---CCCCCCccEEEEEECccccCcc---eEEEccCCC
Q 017257          321 IEVHEY-D---MSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK  358 (374)
Q Consensus       321 f~V~D~-d---~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~  358 (374)
                      |.|||+ |   ..++++|||.+.||+..+..|.   .|.+|.+..
T Consensus        74 v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~  118 (483)
T 3bxj_A           74 LHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT  118 (483)
T ss_dssp             ---------------------------------CCEECC------
T ss_pred             EEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence            999994 4   2567999999999999998764   467886554

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.13  E-value=6.1e-11  Score=124.94  Aligned_cols=107  Identities=26%  Similarity=0.432  Sum_probs=87.4

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V  323 (374)
                      ..|.|+|+.|++|+.      .+..+.+||||++.+.+.+....++||+++++++||+|||+|.|.+...+. ..|.|+|
T Consensus       172 ~~L~V~v~~a~~L~~------~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v  245 (674)
T 3pfq_A          172 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEI  245 (674)
T ss_dssp             SEEEEEEEEEESCCC------CSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEE
T ss_pred             ceeeeeeecccccCC------CCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEE
Confidence            468999999999853      244567899999999876666678899999999999999999999875544 4599999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcc--eEEEccCC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHDR  357 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy--R~vpL~d~  357 (374)
                      ||+|..+++++||.+.++++++..+-  .|.+|.+.
T Consensus       246 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls~  281 (674)
T 3pfq_A          246 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ  281 (674)
T ss_dssp             EECCSSSCCEECCBCCCBTTHHHHCCEEEEEECBCT
T ss_pred             eecccccccccccccccchhhhccCCcccceeeccc
Confidence            99999999999999999999886432  34566543

>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A

Probab=98.11  E-value=2.1e-05  Score=64.33  Aligned_cols=109  Identities=16%  Similarity=0.168  Sum_probs=70.9

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeee-eeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kT-k~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      -|+|.+.+..--++.  +    .....||||.|.+....... ..+| .+.+.++.|+||++|.-.|.  +-..|.+.|+
T Consensus         7 flRi~~~~~~~~~~~--~----~~~~lDPy~aV~vdE~~~~e-~g~t~~~K~kT~~P~Wne~Fd~~V~--~Gr~l~i~Vf   77 (126)
T 1yrk_A            7 FLRIAFNSYELGSLQ--A----EDEANQPFCAVKMKEALSTE-RGKTLVQKKPTMYPEWKSTFDAHIY--EGRVIQIVLM   77 (126)
T ss_dssp             EEEEEEEEEECSSCC--C----SSSSCCCEEEEEEEEEEEET-TEEEEECCSCCBCCCTTCEEEEECC--TTCEEEEEEE
T ss_pred             cEEeeeccccccccC--C----ccccCCceEEEEeeeeEEcc-cceeecccCCCCCcCccceEEeeee--CCEEEEEEEE
Confidence            367776655422211  0    11247999999886321111 2255 55667899999999888765  4467899999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc-----c---eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG-----I---RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G-----y---R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      +..    .+|++.+++++..|...     -   -||.|     +  +.+.|++.+++|
T Consensus        78 h~a----~~fvAn~tV~~edL~~~c~~~~g~~e~WvdL-----e--P~Gkl~~~i~~~  124 (126)
T 1yrk_A           78 RAA----EEPVSEVTVGVSVLAERCKKNNGKAEFWLDL-----Q--PQAKVLMSVQYF  124 (126)
T ss_dssp             EET----TEEEEEEEEEHHHHHHHHHTTTTEEEEEEEC-----B--SSCEEEEEEEEE
T ss_pred             cCC----CCeeeEEEEEHHHHHhhhccCCCceEEEEec-----c--cCcEEEEEEEEe
Confidence            654    28999999999998732     1   25555     2  255788888775

>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}

Probab=98.02  E-value=4.8e-05  Score=63.06  Aligned_cols=110  Identities=13%  Similarity=0.148  Sum_probs=70.8

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeee-eeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKT-KTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kT-k~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      -|+|.+.+..--+..  ..   .....||||.|.+..... ....+| .+.+.++.|+||++|.-.|.  +-..|.|.|+
T Consensus        11 flRi~l~~~~~~~~~--~~---~~~~lDPY~aV~VdE~~~-te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vf   82 (138)
T 2enj_A           11 FLRIGLSNFDCGSCQ--SC---QGEAVNPYCAVLVKEYVE-SENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVK   82 (138)
T ss_dssp             CEEEEEEEEECCCCC--CS---CCCCCCCEEEEEEEEEEE-ETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEE
T ss_pred             ceEEEeeccccCCCC--Cc---ccccCCceEEEEeeeeee-ccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEE
Confidence            367777665532221  00   012479999998863211 012455 45556789999999888765  3467899999


Q ss_pred             eeCCCCCCCccEEEEEECccccCc--------ceEEEccCCCCCccCCeEEEEEEEEC
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQG--------IRAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~G--------yR~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                      +..    .+|++.+++++..|...        --||.|     +  +.+.|++.++++
T Consensus        83 h~a----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdL-----e--P~Gkl~v~i~~~  129 (138)
T 2enj_A           83 GKN----VDLISETTVELYSLAERCRKNNGKTEIWLEL-----K--PQGRMLMNARYF  129 (138)
T ss_dssp             CSS----CSCCEEEEEESHHHHHHHHHTTTCEEEEEEC-----B--SSCEEEEEEEEC
T ss_pred             cCC----CCeeeEEEEEHHHHHhhhccCCCceEEEEec-----c--cCcEEEEEEEEE
Confidence            543    38999999999999732        135555     2  255788888774

>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A

Probab=96.40  E-value=0.00037  Score=65.80  Aligned_cols=35  Identities=23%  Similarity=0.586  Sum_probs=28.4

Q ss_pred             ChHHHhhccccCCCC-----CCCC------CCCChhhhccceEEec
Q 017257            1 MVTQTLGEILFTPGS-----ECLK------EFPSPESLKRRIIIST   35 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~-----~~~~------~lpSPe~Lk~kiliK~   35 (374)
                      +|+++||++||+|..     ..+.      .||||++|||||||.-
T Consensus       148 eI~~vFGd~L~tPddvrG~~~TL~eAVla~GWPSl~slRGKVlf~L  193 (339)
T 3h4x_A          148 LIRQKLGDAVYGPGDLTGGHATADEAVRAGGWPSRADLAGKFLFEL  193 (339)
T ss_dssp             HHHHHHGGGBCCHHHHHTTSSSHHHHHHHHCCCBTGGGTTCEEEEE
T ss_pred             HHHHHhccceEcchhhcccccCHHHHHhcCCCCChHHhCCCEEEEE
Confidence            478999999999863     2233      4999999999999974

>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A

Probab=95.79  E-value=0.057  Score=59.00  Aligned_cols=103  Identities=17%  Similarity=0.176  Sum_probs=68.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeec---CCccEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR  320 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~Lr  320 (374)
                      ..++|+|+++.++..+       .....+.||++.+.-.... +...+|+.+. ..+|.|||.++|++..   |-.|.|.
T Consensus       355 ~~f~v~i~~~~~~n~~-------~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~  426 (1091)
T 3hhm_A          355 SALRIKILCATYVNVN-------IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLC  426 (1091)
T ss_dssp             SEEEEEEEEESCCCCC-------CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEE
T ss_pred             CCEEEEEEEecCCCCC-------ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEE
Confidence            4689999999876532       1123567999998732222 1223444332 3478899999999874   5569999


Q ss_pred             EEEEeeCCC----CCCCccEEEEEECc----cccCcceEEEcc
Q 017257          321 IEVHEYDMS----EKDDFGGQTCLPVS----ELKQGIRAVPLH  355 (374)
Q Consensus       321 f~V~D~d~~----~~dd~iG~~~ipl~----~L~~GyR~vpL~  355 (374)
                      |+||+....    .....||++.++|-    .|++|-..+.|.
T Consensus       427 ~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW  469 (1091)
T 3hhm_A          427 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW  469 (1091)
T ss_dssp             EEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECE
T ss_pred             EEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEee
Confidence            999986532    12358999999995    578897776664

>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*

Probab=95.54  E-value=0.048  Score=59.01  Aligned_cols=103  Identities=17%  Similarity=0.197  Sum_probs=68.8

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeec---CCccEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL  319 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~---pela~L  319 (374)
                      ...+.|+|+++.++...         ...+.||++.+...... +....|..+.-..+|.|||.+.|++..   |-.|.|
T Consensus       216 ~~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L  286 (940)
T 2wxf_A          216 EQPFSIELIEGRKVNAD---------ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARL  286 (940)
T ss_dssp             CSEEEEEEEEEECCCC------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEE
T ss_pred             CCceEEEEEEecccCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEE
Confidence            45799999999987431         23467999988632211 112344444334579999999999874   555899


Q ss_pred             EEEEEeeCCC--C----------CCCccEEEEEECc----cccCcceEEEcc
Q 017257          320 RIEVHEYDMS--E----------KDDFGGQTCLPVS----ELKQGIRAVPLH  355 (374)
Q Consensus       320 rf~V~D~d~~--~----------~dd~iG~~~ipl~----~L~~GyR~vpL~  355 (374)
                      .|+||+....  +          ....+|++.++|-    .|++|...+.|.
T Consensus       287 ~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw  338 (940)
T 2wxf_A          287 CFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMW  338 (940)
T ss_dssp             EEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECE
T ss_pred             EEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEe
Confidence            9999996432  1          1348999999985    477897777664

>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}

Probab=95.11  E-value=0.59  Score=41.77  Aligned_cols=40  Identities=15%  Similarity=0.223  Sum_probs=31.0

Q ss_pred             eeeeeeeccCCCCCccCcEEEEEeecCC--ccEEEEEEEeeC
Q 017257          288 VMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIEVHEYD  327 (374)
Q Consensus       288 ~k~kTk~v~~~~nP~Wne~f~F~v~~pe--la~Lrf~V~D~d  327 (374)
                      ..++|-+...+-+|.|+|++...+....  -+-|+|+++...
T Consensus        77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S  118 (220)
T 3l4c_A           77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS  118 (220)
T ss_dssp             SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred             eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence            3567888877889999999988876443  378999998654

>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=94.20  E-value=0.064  Score=58.77  Aligned_cols=102  Identities=15%  Similarity=0.112  Sum_probs=64.6

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC-ceeeeeeeccCCCCCccCcEEEEEeecCC---ccEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR  320 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d-~~k~kTk~v~~~~nP~Wne~f~F~v~~pe---la~Lr  320 (374)
                      ..++|+|.++.++...         ...+.||++.+...... +....|+.+.-..+|.|||.+.|++...+   .|.|.
T Consensus       353 ~~f~i~i~~~~~~~~~---------~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~  423 (1092)
T 2y3a_A          353 NPFQITLVKGNKLNTE---------ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLC  423 (1092)
T ss_dssp             SEEEEEECCCCCCCCC---------SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEE
T ss_pred             CCEEEEEEEeccCCCC---------CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEE
Confidence            4688999988876421         23467888877532111 11234544433457999999999987544   48999


Q ss_pred             EEEEeeCCC----------------------CCCCccEEEEEECc----cccCcceEEEcc
Q 017257          321 IEVHEYDMS----------------------EKDDFGGQTCLPVS----ELKQGIRAVPLH  355 (374)
Q Consensus       321 f~V~D~d~~----------------------~~dd~iG~~~ipl~----~L~~GyR~vpL~  355 (374)
                      |+||+....                      .....+|++.++|-    .|++|...+.|.
T Consensus       424 ~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw  484 (1092)
T 2y3a_A          424 FAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSW  484 (1092)
T ss_dssp             EECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCC
T ss_pred             EEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEe
Confidence            999985311                      01238899999985    467887776664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	374
d1qasa3	327	c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (P	5e-63
d2zkmx4	349	c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human	9e-62
d1qasa2	131	b.7.1.1 (A:626-756) PI-specific phospholipase C is	3e-28
d2zkmx2	122	b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human	2e-25
d1w15a_	138	b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi	1e-15
d1a25a_	132	b.7.1.2 (A:) C2 domain from protein kinase c (beta	4e-14
d1uowa_	157	b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu	2e-12
d2cm5a1	137	b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (	6e-12
d2bwqa1	125	b.7.1.2 (A:729-853) Regulating synaptic membrane e	6e-10
d1dqva2	145	b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus	3e-09
d1wfja_	136	b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cr	3e-08
d1rsya_	143	b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu	4e-08
d1dqva1	130	b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus	5e-08
d1ugka_	138	b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens	2e-07
d1rh8a_	142	b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax	8e-07
d2ep6a1	126	b.7.1.1 (A:92-217) Multiple C2 and transmembrane d	1e-06
d1gmia_	136	b.7.1.1 (A:) Domain from protein kinase C epsilon	2e-06
d1wfma_	138	b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapie	0.001

>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 327

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C isozyme D1 (PLC-D1)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  202 bits (515), Expect = 5e-63
 Identities = 69/243 (28%), Positives = 90/243 (37%), Gaps = 25/243 (10%)

Query: 1   MVTQTLGEILFT-PGSECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKG 59
            +   LG IL   P        PSPE LK +I++  K     L A  E   E      + 
Sbjct: 106 HLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATDVSDEV 165

Query: 60  SADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGK 119
            A E                       D  V +  +    + +    PE   +I      
Sbjct: 166 EAAEME---------------------DEAVRSQVQHKPKEDKLKLVPELSDMIIYCKSV 204

Query: 120 PKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNY 179
             GG               S SE +    +   GN  VR     L RIYP G R DSSNY
Sbjct: 205 HFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNY 264

Query: 180 NPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV 239
           +P+  W+ G Q+VA N Q  G  + +  G F+ NGGCGYV KP FL      N  F+ + 
Sbjct: 265 SPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDP---NTTFNSRA 321

Query: 240 KLP 242
              
Sbjct: 322 LTQ 324

>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 349

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 9e-62
 Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 10/237 (4%)

Query: 1   MVTQTLGEILFTPGSECL-----KEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQ 55
                 G++L T   E          PSPE L+ +I+I  K  +        K+   +++
Sbjct: 112 YCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAE 171

Query: 56  RGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEED---SDDKSQHNEAPEYRKL 112
                +    W  E            ++++  G +D +E     SD+ +   E   Y ++
Sbjct: 172 GSSPPSAPAVWAGEEGTELEEEEVEEEEEEESGNLDEEEIKKMQSDEGTAGLEVTAYEEM 231

Query: 113 IA-IHAGKPKGGLKECLKVDPDKVRRL-SLSEQQLENAVGTYGNDIVRFTQRNLLRIYPK 170
            + ++  +P   +        ++   + S +E +  + +       V + +R + RIYPK
Sbjct: 232 SSLVNYIQPTKFVSFEFSAQKNRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIYPK 291

Query: 171 GIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQ 227
           G R+DSSNY P + W+ G QMVA N Q     +     +F  NG  GY+ K  F+ +
Sbjct: 292 GTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRR 348

>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  105 bits (262), Expect = 3e-28
 Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 5/130 (3%)

Query: 245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI-PSW 303
           + L+V +  G+      P  + +  S  D    V I GV  DT  ++T  + +N   P W
Sbjct: 4   ERLRVRIISGQ----QLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRW 59

Query: 304 NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYK 363
           + EFEF ++VP+LAL+R  V +YD S K+DF GQ+ +P + LKQG R V L  + G+++ 
Sbjct: 60  DMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHP 119

Query: 364 SVKLLMHFEF 373
           S  L +    
Sbjct: 120 SATLFVKISI 129

>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 122

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 2e-25
 Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 19/132 (14%)

Query: 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTL---EDNWIPS 302
           TL +TV  G           F +      Y  V + G+P D   +    L    ++  P 
Sbjct: 2   TLSITVISG----------QFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPV 51

Query: 303 WNEE--FEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGE 360
           W EE      + +PELA LR+ V E      + F G   +P++ L  G   + LH     
Sbjct: 52  WKEEPFVFEKILMPELASLRVAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNM 107

Query: 361 RYKSVKLLMHFE 372
                 L +  E
Sbjct: 108 PLTMPALFIFLE 119

>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin IV
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.9 bits (173), Expect = 1e-15
 Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 8/112 (7%)

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
                TL V V               D     D Y +V +         KKT   +    
Sbjct: 11  QSTTNTLTVVVLKARHL------PKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPN 64

Query: 301 PSWNEEFEFPLSVPELAL--LRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 350
             +NE F F +    L    +   V + +   +++  G+  L  +    G  
Sbjct: 65  AVFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGG 116

>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain from protein kinase c (beta)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.3 bits (161), Expect = 4e-14
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 267 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVHE 325
           D     D Y ++ +   P     +KTKT++ +  P WNE F F L   +    L +E+ +
Sbjct: 31  DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 90

Query: 326 YDMSEKDDFGGQTCLPVSELKQGIRAV--PLHDRKGERYKSV 365
           +D++ ++DF G     +SEL++        L  ++   Y +V
Sbjct: 91  WDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNV 132

>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.1 bits (150), Expect = 2e-12
 Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 8/112 (7%)

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           +P    L V +   +           D     D Y ++ +         KKT   ++   
Sbjct: 21  VPTAGKLTVVILEAKNL------KKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLN 74

Query: 301 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 350
           P +NE F F +   ++    + + V +YD   K+D  G+  +  +     +R
Sbjct: 75  PYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELR 126

>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2b-domain of rabphilin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.6 bits (146), Expect = 6e-12
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 9/123 (7%)

Query: 242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 301
             +  L V +               DA    D + ++ +          KT+  +    P
Sbjct: 12  TQQGGLIVGIIRCVHL------AAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNP 65

Query: 302 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRK 358
            +NEEF + +   +LA   L I V +YD+ + +D+ G   L +S   + ++        K
Sbjct: 66  EFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNK 125

Query: 359 GER 361
            ++
Sbjct: 126 DKK 128

>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Regulating synaptic membrane exocytosis protein, rim2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 6e-10
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 11/109 (10%)

Query: 242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 301
                L VT+   +           +   P + Y ++      +D   ++TKT++    P
Sbjct: 11  KVGHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 64

Query: 302 SWNEEFEFPLSVP---ELALLRIEVHEYDM--SEKDDFGGQTCLPVSEL 345
            WN+ F +           +L I + +      E+ +F G+  + +   
Sbjct: 65  KWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETA 113

>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin III
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 8/107 (7%)

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           LP    L VT+               D     D Y +  +         +KT   ++   
Sbjct: 16  LPTAGLLTVTIIKASNLK------AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLN 69

Query: 301 PSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSEL 345
           P++NE   F ++   +    L I V +YD    ++  G   +     
Sbjct: 70  PTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAA 116

>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 136

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain protein At1g63220
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.7 bits (118), Expect = 3e-08
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 14/129 (10%)

Query: 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 305
           TL+V +   +G          D  +  D Y ++           K          P WNE
Sbjct: 11  TLEVVLVSAKGL------EDADFLNNMDPYVQLTCR----TQDQKSNVAEGMGTTPEWNE 60

Query: 306 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ--GIRAVPLHDRKGERYK 363
            F F +S      L+ ++ + D+  +DD  G+  +P+  +     I     +  K E YK
Sbjct: 61  TFIFTVSEGTTE-LKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYK 119

Query: 364 -SVKLLMHF 371
             + + + F
Sbjct: 120 GEIWVALSF 128

>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.8 bits (118), Expect = 4e-08
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 10/109 (9%)

Query: 242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 301
                L V +               D     D Y +V +  +P      +TK       P
Sbjct: 31  FQNNQLLVGIIQAAELPA------LDMGGTSDPYVKVFL--LPDKKKKFETKVHRKTLNP 82

Query: 302 SWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 348
            +NE+F F +   EL    L + V+++D   K D  G+  +P++ +  G
Sbjct: 83  VFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFG 131

>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 130

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin III
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.2 bits (116), Expect = 5e-08
 Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 11/117 (9%)

Query: 241 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI 300
           L     L V +           +   D Y          I  +P      +TK       
Sbjct: 14  LYGSDQLVVRILQALDLPAKDSNGFSDPYVK--------IYLLPDRKKKFQTKVHRKTLN 65

Query: 301 PSWNEEFEFPLSVPELA--LLRIEVHEYDMSEKDDFGGQTCLP-VSELKQGIRAVPL 354
           P +NE F+F + + ELA   L   V+++D   + D  GQ  L  + EL +     PL
Sbjct: 66  PIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPL 122

>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Length = 138

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin IV
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-07
 Identities = 22/110 (20%), Positives = 43/110 (39%), Gaps = 10/110 (9%)

Query: 242 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIP 301
             +K   V +          P     + +  D Y ++ I  +P      KT+ L     P
Sbjct: 19  FERKAFVVNIKEAR----GLPAMDEQSMTS-DPYIKMTI--LPEKKHKVKTRVLRKTLDP 71

Query: 302 SWNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 348
           +++E F F   P +  +   L   +  +D   +DD  G+  +P+S ++  
Sbjct: 72  AFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELS 121

>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Piccolo
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.0 bits (108), Expect = 8e-07
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 9/121 (7%)

Query: 246 TLKVTVYMGEGWYYDFPHTHFDAY---SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPS 302
            L + +           + + D +          +V +    +    ++TK ++ +  P 
Sbjct: 19  NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPE 78

Query: 303 WNEEFEF---PLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV---PLHD 356
           WN+   +    +       L + V +YD    +DF G+  + +S            PL +
Sbjct: 79  WNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138

Query: 357 R 357
           +
Sbjct: 139 Q 139

>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 13/130 (10%)

Query: 246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE 305
            L+V V               D     D +  +            +T T+  N  P WN+
Sbjct: 7   ILQVKVLKAAD------LLAADFSGKSDPFCLL-----ELGNDRLQTHTVYKNLNPEWNK 55

Query: 306 EFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKS 364
            F FP+      +L + V + D  +  DF G+  +P+  ++ G      L ++  E+   
Sbjct: 56  VFTFPI-KDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFK 114

Query: 365 VKLLMHFEFI 374
             + +  + I
Sbjct: 115 GVIYLEMDLI 124

>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Length = 136

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from protein kinase C epsilon
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 3/104 (2%)

Query: 246 TLKVTVYMGEGW-YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWN 304
            LK+ +          +         P  F     IA    D+ + +T T +    P+W+
Sbjct: 7   LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWH 66

Query: 305 EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG 348
           +EF     V     + + V        DDF     +   EL Q 
Sbjct: 67  DEFVTD--VCNGRKIELAVFHDAPIGYDDFVANCTIQFEELLQN 108

>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} Length = 138

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin XIII
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 0.001
 Identities = 21/129 (16%), Positives = 35/129 (27%), Gaps = 19/129 (14%)

Query: 227 QTGPHNEVFDPKVKL-----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 281
            +G  N+   PK+         K  L VT                +     D Y   G  
Sbjct: 5   SSGSWNQA--PKLHYCLDYDCQKAELFVTRLEAVT---------SNHDGGCDCYV-QGSV 52

Query: 282 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSE--KDDFGGQTC 339
                +V  +T   +     +W E    PL+  EL    + +         +    G+  
Sbjct: 53  ANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELR 112

Query: 340 LPVSELKQG 348
           L +      
Sbjct: 113 LGLDGTSVP 121

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	374
d1qasa3	327	Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus n	100.0
d2zkmx4	349	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	100.0
d2zkmx2	122	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.96
d1qasa2	131	PI-specific phospholipase C isozyme D1 (PLC-D1), C	99.96
d2ep6a1	126	Multiple C2 and transmembrane domain-containing pr	99.76
d1rlwa_	126	Domain from cytosolic phospholipase A2 {Human (Hom	99.71
d1a25a_	132	C2 domain from protein kinase c (beta) {Rat (Rattu	99.69
d2nq3a1	133	E3 ubiquitin-protein ligase Itchy {Human (Homo sap	99.65
d1wfja_	136	C2 domain protein At1g63220 {Thale cress (Arabidop	99.63
d1rsya_	143	Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10	99.6
d2cm5a1	137	C2b-domain of rabphilin {Rat (Rattus norvegicus) [	99.59
d1w15a_	138	Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId:	99.59
d1rh8a_	142	Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]}	99.58
d1wfma_	138	Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9	99.58
d1dqva1	130	Synaptotagmin III {Rat (Rattus norvegicus) [TaxId:	99.57
d1uowa_	157	Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10	99.56
d1gmia_	136	Domain from protein kinase C epsilon {Rat (Rattus	99.55
d2bwqa1	125	Regulating synaptic membrane exocytosis protein, r	99.55
d1ugka_	138	Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960	99.53
d2cjta1	128	Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId:	99.48
d1dqva2	145	Synaptotagmin III {Rat (Rattus norvegicus) [TaxId:	99.45
d1bdya_	123	Domain from protein kinase C delta {Rat (Rattus no	99.36
d1e7ua2	174	Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa)	96.95

>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C isozyme D1 (PLC-D1)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.8e-55  Score=423.17  Aligned_cols=216  Identities=31%  Similarity=0.464  Sum_probs=160.9

Q ss_pred             ChHHHhhccccCCC-CCCCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCcccccCCCcCCccccCCC
Q 017257            1 MVTQTLGEILFTPG-SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNS   79 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~-~~~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (374)
                      ||+++|||+||.++ ......||||++||||||||+|+.....+......               ....+..+..    +
T Consensus       106 ~l~~~fGd~L~~~~~~~~~~~~psp~~Lk~KIlik~K~~~~~~~~~~~~~---------------~~~~~~~~~~----~  166 (327)
T d1qasa3         106 HLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENG---------------SEATDVSDEV----E  166 (327)
T ss_dssp             HHHHHTGGGBCCSCCTTCCSSCCCTGGGTTCEEEEECCCCC---------------------------------------
T ss_pred             HHHHHHHhhccCCCcccccccCCCHHHHhhhhhhcccccccccccccccC---------------ccCCCccccc----c
Confidence            58999999999977 45578899999999999999999875543321100               0000000000    0


Q ss_pred             CCCCCCCCCCCCCCCCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHHHHhhccccchhc
Q 017257           80 ACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRF  159 (374)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~~~~~~~~~~~~~  159 (374)
                      ..+.++..  ..........+.+.+++++|++||+|+++++|++|..........++|+||+|+++.+++++++.+|++|
T Consensus       167 ~~~~~~~~--~~~~~~~~~~~~~~~~~~eLs~li~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~l~~~~~~~l~~~  244 (327)
T d1qasa3         167 AAEMEDEA--VRSQVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRH  244 (327)
T ss_dssp             ------------------------CCCHHHHTTCSSEEECCCCCCCTTSSCSCCTTEEEEEEHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccch--hhhhhhcccchhhhHhhHHHHhHHHHhcCccCCCccchhhcCCcceeeeecCHHHHHHHHHHhhHHHHHH
Confidence            00000000  0011112223346788999999999999999999988765545578999999999999999999999999


Q ss_pred             cccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCcccCCCCCcccCCCC
Q 017257          160 TQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKV  239 (374)
Q Consensus       160 ~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~~~~~~~~f~p~~  239 (374)
                      |++||+||||+|+|++||||||+.+|++|||||||||||.|.+||+|.|||+.||+|||||||++||+..   ..|+|..
T Consensus       245 nk~~l~rvyP~g~ridSsNy~P~~~w~~G~Q~valN~Qt~D~~m~ln~~~F~~NG~~GyVLKP~~Lr~~~---~~f~p~~  321 (327)
T d1qasa3         245 NVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPAFLRDPN---TTFNSRA  321 (327)
T ss_dssp             HHHSCEEEECCTTCTTCCCCCSHHHHTTTCCEEEECTTCCSHHHHHHHHHTTSGGGCSEEECCGGGSCTT---CCCCTTS
T ss_pred             HHhheEEEecCCCCCCCCCCChHHHHhcCCcEEEEeccCCChhHHHHHHHHHhcCCcceEECCHHHcCCC---CCcCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999864   3688865


Q ss_pred             C
Q 017257          240 K  240 (374)
Q Consensus       240 ~  240 (374)
                      .
T Consensus       322 ~  322 (327)
T d1qasa3         322 L  322 (327)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: PLC-like phosphodiesterases
family: Mammalian PLC
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-55  Score=424.38  Aligned_cols=225  Identities=23%  Similarity=0.368  Sum_probs=154.7

Q ss_pred             ChHHHhhccccCCCCC-----CCCCCCChhhhccceEEecCCCchhhhHHHhhhhhccccCCCCCCccccc-CCCcCCcc
Q 017257            1 MVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAW-GKEVPNLK   74 (374)
Q Consensus         1 ~l~~~~Gd~L~~~~~~-----~~~~lpSPe~Lk~kiliK~K~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   74 (374)
                      ||+++||++|+.++.+     ....+|||++||||||||+|+.....+.....+.............+..+ +.+...+.
T Consensus       112 ~l~~~~g~~L~~~~~~~~~~~~~~~~pSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (349)
T d2zkmx4         112 YCRTIFGDMLLTEPLEKFPLKPGVPLPSPEDLRGKILIKNKKNQFSGPTSSSKDTGGEAEGSSPPSAPAVWAGEEGTELE  191 (349)
T ss_dssp             HHHHHHGGGBCCSCCTTSCSSTTCCCCCTTTTTTCEEEECCCC-------------------------------------
T ss_pred             HHHHHHHhhhccCcccccccCcCCCCCCHHHhcCcEEEEecCCccccccccccccccccccCCCCcccccccCccccccc
Confidence            5899999999997732     35789999999999999999986443332111100000000000000000 00000000


Q ss_pred             ccCCCCCCCCCCCCCCCCC-------CCCcccccccccchhhhcceeeecceecCCcccccccCCCceEEeeccHHHHHH
Q 017257           75 SLNNSACDKDDFDGGVDND-------EEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLEN  147 (374)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ls~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~k~~~  147 (374)
                      .....++...  ......+       ...........+.++|++|++|+.+++|.+|+......+ .+.++||+|+++.+
T Consensus       192 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~y~~~~~~~~~~~~~~~~~-~~~~~S~sE~~~~~  268 (349)
T d2zkmx4         192 EEEVEEEEEE--ESGNLDEEEIKKMQSDEGTAGLEVTAYEEMSSLVNYIQPTKFVSFEFSAQKNR-SYVISSFTELKAYD  268 (349)
T ss_dssp             ---------------CCSHHHHHHHHHTTGGGGGCCCCCHHHHTTCSSCEECCCCCHHHHHHHTC-TTEEEEEEHHHHHH
T ss_pred             cccccccccc--cccccchhhhhhhccccccccccccchHHHHhhHhhhcCCccccchhhcccCc-ceEEEecCHHHHHH
Confidence            0000000000  0000000       001122345678899999999999999999988887655 56899999999999


Q ss_pred             HHhhccccchhccccceeeeecCCcccCCCCCCccccccccceeeeeccccCCcceeeeeeecccccceeeeecCCCccc
Q 017257          148 AVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQGHGRSLWLMHGMFRANGGCGYVKKPNFLLQ  227 (374)
Q Consensus       148 ~~~~~~~~~~~~~~~~l~RvYP~g~R~~SSN~~P~~~W~~G~QmvAlN~Qt~d~~m~ln~~~F~~ng~~GYVLKP~~lr~  227 (374)
                      +++.++.+|++||++||+||||+|+|++||||||+.+|++|||||||||||.|.+||||+|||++||+|||||||++||+
T Consensus       269 ~~~~~~~~li~~Nk~~L~RVYP~g~RvdSSNynP~~~W~~GcQ~VALN~Qt~D~~m~ln~g~F~~NG~cGYVLKP~~LR~  348 (349)
T d2zkmx4         269 LLSKASVQFVDYNKRQMSRIYPKGTRMDSSNYMPQMFWNAGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHEFMRR  348 (349)
T ss_dssp             HHHHSHHHHHHHHHHSEEEEECCTTCTTCCCCCSHHHHHTTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCGGGTC
T ss_pred             HHHHhHHHHHHHhhccEEEECcCCCcCCCCCCCcHHHHhcCccEeEecccCCCHHHHHHHHHHHhcCCcCeEECCHHHCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999996


Q ss_pred             C
Q 017257          228 T  228 (374)
Q Consensus       228 ~  228 (374)
                      +
T Consensus       349 p  349 (349)
T d2zkmx4         349 P  349 (349)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-29  Score=208.86  Aligned_cols=114  Identities=31%  Similarity=0.489  Sum_probs=97.6

Q ss_pred             EEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCcee-eeeeec--cCCCCCccCcE-EEE-EeecCCccEEE
Q 017257          246 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM-KKTKTL--EDNWIPSWNEE-FEF-PLSVPELALLR  320 (374)
Q Consensus       246 ~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k-~kTk~v--~~~~nP~Wne~-f~F-~v~~pela~Lr  320 (374)
                      +|+|+|||||+|+..          ..||||+|+++|.+.|..+ .+|+++  .|++||+|||+ |.| .+..+++++|+
T Consensus         2 tl~V~Visaq~L~~~----------~~dPyV~V~l~g~~~D~~~~~~t~~~~~~n~~nP~wne~~~~~~~~~~~~l~~L~   71 (122)
T d2zkmx2           2 TLSITVISGQFLSER----------SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR   71 (122)
T ss_dssp             EEEEEEEEEESCCSS----------CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred             EEEEEEEEeeCCCCC----------CCCcEEEEEEECcCCCCCccEEEEEEEeCCeecceEcccEeEEEecCCCcccEEE
Confidence            699999999999631          3699999999999887543 445543  45599999976 444 56788999999


Q ss_pred             EEEEeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.|||+|    ++|||++++||++|++|||||||+|.+|+++..|+|||||++
T Consensus        72 f~V~D~d----~~~lG~~~ipl~~l~~GyR~vpL~~~~g~~l~~~~L~v~i~~  120 (122)
T d2zkmx2          72 VAVMEEG----NKFLGHRIIPINALNSGYHHLCLHSESNMPLTMPALFIFLEM  120 (122)
T ss_dssp             EEEEETT----TEEEEEEEEEGGGBCCEEEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred             EEEECCC----CCEEEEEEEEcccCcCCceEEEccCCCcCCCCCceEEEEEEE
Confidence            9999975    799999999999999999999999999999999999999986

>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=7.4e-29  Score=207.23  Aligned_cols=125  Identities=36%  Similarity=0.571  Sum_probs=111.4

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCC-CCCccCcEEEEEeecCCccEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~-~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      ..|+|+||+|++|+.    .+.+..+.+||||+|++.|.+.+..++||++++++ +||.|||+|+|.+..++.++|+|+|
T Consensus         4 ~~l~V~Vi~a~~L~~----~~~~~~~~~DPyV~v~l~g~~~~~~~~~T~~v~~~~~nP~wne~f~f~~~~~~~~~L~~~V   79 (131)
T d1qasa2           4 ERLRVRIISGQQLPK----VNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMV   79 (131)
T ss_dssp             EEEEEEEEEEESCCC----CC-----CCCEEEEEEEESSTTTCEEEECCCCSSCSSSCEEEEEEEEEESCGGGCEEEEEE
T ss_pred             EEEEEEEEEeeCCCC----CCCCCCCCcCeEEEEEEccCCCCcEEEEEEEEecccCCceEEEEEEEEEEcchhceEEEEE
Confidence            579999999999963    22344567899999999998888889999998776 7999999999999989999999999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcceEEEccCCCCCccCCeEEEEEEEE
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~GyR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+|..+++++||+++|||+++++||||+||+|.+|+++.+++|||||++
T Consensus        80 ~D~d~~~~d~~iG~~~i~l~~l~~g~~~~~L~~~~g~~~~~~~L~v~i~~  129 (131)
T d1qasa2          80 EDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFVKISI  129 (131)
T ss_dssp             EECCTTTCCEEEEEEEEEGGGBCCEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred             EEecCCCCCcEEEEEEEEEeccCCCCEEEECCCCCcCCCCCCEEEEEEEE
Confidence            99999888999999999999999999999999999999999999999987

>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Multiple C2 and transmembrane domain-containing protein 2, MCTP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-18  Score=143.08  Aligned_cols=117  Identities=21%  Similarity=0.345  Sum_probs=96.9

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      +.|+|+|++|++|+.      .+..+.+||||+|.+.+     .+++|++++++.||+|||+|.|.+..+. ..|.|+||
T Consensus         6 G~L~V~v~~A~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~T~~~~~t~nP~wne~f~f~v~~~~-~~L~i~V~   73 (126)
T d2ep6a1           6 GILQVKVLKAADLLA------ADFSGKSDPFCLLELGN-----DRLQTHTVYKNLNPEWNKVFTFPIKDIH-DVLEVTVF   73 (126)
T ss_dssp             EEEEEEEEEEESCCC------SSSSSCCCEEEEEEETT-----EEEECCCCSSCSSCCCCEEEEEEESCTT-CEEEEEEE
T ss_pred             EEEEEEEEEeECCCC------CCCCCCcCeEEEEEcCC-----eEEEEEeeCCceeEEEEEEEEEEEeccC-ceeEEEEE
Confidence            579999999999963      23456789999999853     5789999999999999999999987664 67999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCcc-eEEEccCCCCCccCCeEEEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~Gy-R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |++..+++++||++.++|+.+..|. ++.+|....++....+.|.++++|
T Consensus        74 d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~l~~~~~~~~~~G~i~l~~~~  123 (126)
T d2ep6a1          74 DEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDL  123 (126)
T ss_dssp             EEETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred             EccCCcCcceEEEEEEEHHHCCCCCceEEEccccCCCCceeEEEEEEEEE
Confidence            9998888899999999999999886 556776665555445678888876

>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from cytosolic phospholipase A2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.9e-17  Score=135.80  Aligned_cols=118  Identities=25%  Similarity=0.363  Sum_probs=92.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|+|+|++|++|+..   ...+..+.+||||+|.+.+..  ..++||+++.++.||.|||+|.|.+..++...|+|.||
T Consensus         3 ~~l~V~v~~a~~L~~~---~~~d~~~~~Dpyv~v~l~~~~--~~~~~T~~~~~t~nP~wne~f~f~i~~~~~~~L~v~V~   77 (126)
T d1rlwa_           3 HKFTVVVLRATKVTKG---AFGDMLDTPDPYVELFISTTP--DSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLM   77 (126)
T ss_dssp             EEEEEEEEEEESCCSC---HHHHHHCCCCEEEEEECTTST--TCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEE
T ss_pred             cEEEEEEEEccCCCCc---cccccCCCCCcEEEEEECCcc--cceeEeeecCCCccceeceeeeecccCcccCcEEEEEE
Confidence            5799999999999631   223445778999999986432  35678999999999999999999998777788999999


Q ss_pred             eeCCCCCCCccEEEEEECccccCcce---EEEccCCCCCccCCeEEEEEEEE
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |++.. ++++||++.++|+.|..|.+   +++|...     ..+.|.+.+++
T Consensus        78 d~d~~-~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~-----~~g~i~~~l~~  123 (126)
T d1rlwa_          78 DANYV-MDETLGTATFTVSSMKVGEKKEVPFIFNQV-----TEMVLEMSLEV  123 (126)
T ss_dssp             ECCSS-CCEEEEEEEEEGGGSCTTCEEEEEEEETTT-----EEEEEEEEEEC
T ss_pred             ECCCC-CCCeEEEEEEEHHHccCCCeEEEEEEccCC-----CeEEEEEEEEE
Confidence            99865 48999999999999998864   4677442     12355555554

>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain from protein kinase c (beta)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=3.8e-17  Score=135.26  Aligned_cols=106  Identities=26%  Similarity=0.420  Sum_probs=89.0

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc-cEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV  323 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel-a~Lrf~V  323 (374)
                      ..|.|+|+.|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+..++. ..|.|.|
T Consensus        15 ~~L~V~V~~a~~L~~------~d~~g~~DpYv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V   88 (132)
T d1a25a_          15 EVLIVVVRDAKNLVP------MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEI   88 (132)
T ss_dssp             SEEEEEEEEEESCCC------CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEE
T ss_pred             CEEEEEEEeeeCCCC------CCCCCCcCeEEEEEEccCCCCccccEEeeecCCCCCccceEEEEEeEccccCCEEeEEE
Confidence            569999999999964      234567899999999776555678899999999999999999999876554 5799999


Q ss_pred             EeeCCCCCCCccEEEEEECccccCcc--eEEEccC
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELKQGI--RAVPLHD  356 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~~Gy--R~vpL~d  356 (374)
                      ||+|..+++++||.+.|+++.|..+-  .|.+|.+
T Consensus        89 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~W~~L~~  123 (132)
T d1a25a_          89 WDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLS  123 (132)
T ss_dssp             EECCSSSCCEEEEEEEEEHHHHTTCCEEEEEECBC
T ss_pred             EecCCCCCCcEeEEEEEeHHHcCCCCCCeEEECCC
Confidence            99998888999999999999987653  3688876

>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: E3 ubiquitin-protein ligase Itchy
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.9e-16  Score=129.52  Aligned_cols=117  Identities=19%  Similarity=0.212  Sum_probs=89.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV  323 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V  323 (374)
                      +.+|.|+|++|.+++.      .+..+.+||||+|.+.+     ..++|++++++.||+|||.|.|.+..  ...|.|+|
T Consensus         5 ~~~L~v~v~~A~~~~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~~~~--~~~l~~~V   71 (133)
T d2nq3a1           5 KSQLQITVISAKLKEN------KKNWFGPSPYVEVTVDG-----QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRV   71 (133)
T ss_dssp             CEEEEEEEEEEEECCC------C--CCCCCEEEEEEETT-----EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEE
T ss_pred             ceEEEEEEEEeECCCc------CCCCCCcCeEEEEEECC-----eEEeeEEEEecccEEEcceEEEEEEe--cceeEEEE
Confidence            3679999999998753      13345689999999864     46799999999999999999999853  35799999


Q ss_pred             EeeCCCCCCCccEEEEEECcccc---Cc-----ceEEEccCCCCCccCCeEEEEEEEE
Q 017257          324 HEYDMSEKDDFGGQTCLPVSELK---QG-----IRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       324 ~D~d~~~~dd~iG~~~ipl~~L~---~G-----yR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      ||+|..++|++||++.++|..+.   .|     ...+.|....+.....+.|.|.++.
T Consensus        72 ~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~~~l~l~~~~~~~~~~G~L~v~l~~  129 (133)
T d2nq3a1          72 WSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG  129 (133)
T ss_dssp             EECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred             EEccCCCCCceEEEEEEEHHHhhhhcCCceeeEEEEEecCCCCCCceEEEEEEEEEee
Confidence            99999888999999999998872   22     2344555555555555678777653

>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain protein At1g63220
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=4.4e-16  Score=129.34  Aligned_cols=115  Identities=23%  Similarity=0.349  Sum_probs=88.3

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccC-CCCCccCcEEEEEeecCCccEEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIE  322 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~-~~nP~Wne~f~F~v~~pela~Lrf~  322 (374)
                      ..+|+|+|++|++|+.      .+..+.+||||+|.+.+     ..++|+++++ +.||+|||+|.|.+..++ ..|+|+
T Consensus         9 ~G~L~V~v~~a~~L~~------~d~~g~~Dpyv~v~~~~-----~~~~t~~~~~~~~nP~Wne~f~f~v~~~~-~~L~v~   76 (136)
T d1wfja_           9 HGTLEVVLVSAKGLED------ADFLNNMDPYVQLTCRT-----QDQKSNVAEGMGTTPEWNETFIFTVSEGT-TELKAK   76 (136)
T ss_dssp             EEEEEEEEEEEEECSS------CCSSCSSCCCEEEESSS-----CEEECCCCTTCCSSCEEEEEEEEEEESSC-CEEEEE
T ss_pred             cEEEEEEEEEeeCCCC------CCCCCCCCccEEEEEee-----eeEEEEEEecCCCcEEEeeEEEEEEcCcc-ceEEEE
Confidence            4689999999999853      34557789999999854     4578888875 689999999999998654 459999


Q ss_pred             EEeeCCCCCCCccEEEEEECcccc-Ccc---eEEEccCCCCCccCCeEEEEEEEE
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELK-QGI---RAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~-~Gy---R~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |||+|..++|++||++.|||..+. .|.   .+.+|. ..++.  .+.|.+.+.|
T Consensus        77 V~d~d~~~~d~~iG~~~i~L~~l~~~~~~~~~~~~l~-~~~~~--~G~i~l~l~~  128 (136)
T d1wfja_          77 IFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEEY--KGEIWVALSF  128 (136)
T ss_dssp             ECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTEE--EEEEEEEEEE
T ss_pred             EEEecCCCCCCEEEEEEEEhHHhcccCCcCcEEEEec-CCCcc--CEEEEEEEEE
Confidence            999998888999999999999874 333   344443 22332  2477777776

>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=1.1e-15  Score=128.09  Aligned_cols=104  Identities=23%  Similarity=0.266  Sum_probs=84.6

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|+.|++|+.      .+..+.+||||+|.+.+.  ...+++|++++++.||+|||+|.|.+..+++  ..|+|
T Consensus        33 ~~~L~V~V~~a~~L~~------~~~~g~~dpyV~v~l~~~--~~~~~kT~~~~~t~~P~wne~f~f~i~~~~l~~~~L~i  104 (143)
T d1rsya_          33 NNQLLVGIIQAAELPA------LDMGGTSDPYVKVFLLPD--KKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM  104 (143)
T ss_dssp             TTEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETT--CCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred             CCEEEEEEEEccCCCC------CCCCCCCCeEEEEEEcCC--CCeeEEEEEeccccCcceeeeeEEEEEeeccCCceEEE
Confidence            3579999999999963      234456899999999743  3456799999999999999999999865543  57999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccCcce---EEEcc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLH  355 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~GyR---~vpL~  355 (374)
                      .|||++..+++++||++.|+|..+..|..   |.+|.
T Consensus       105 ~V~d~d~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L~  141 (143)
T d1rsya_         105 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ  141 (143)
T ss_dssp             EEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred             EEEEcCCCCCCcEEEEEEEEchhccCCCCCccEEeCC
Confidence            99999988889999999999999977653   45554

>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2b-domain of rabphilin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.59  E-value=4.9e-16  Score=128.98  Aligned_cols=111  Identities=21%  Similarity=0.268  Sum_probs=87.8

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|+.|++|+.      .+..+.+||||+|.+........++||++++++.||+|||+|.|.+...++  ..|.|.
T Consensus        15 ~~L~V~v~~a~nL~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~v~   88 (137)
T d2cm5a1          15 GGLIVGIIRCVHLAA------MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDIS   88 (137)
T ss_dssp             TEEEEEEEEEESCCC------CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred             CEEEEEEEEEECCCC------CCCCCCcCeEEEEEEEcCCccceeecCEeEcCCCCCccceEEEEEeEHHHccccEEEEE
Confidence            579999999999964      133456899999999754444567899999999999999999999876654  579999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcce-EEEccCCCCCc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGER  361 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR-~vpL~d~~g~~  361 (374)
                      |||++..+++++||++.+++..+..+.. |.+|.+..+++
T Consensus        89 v~~~~~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~  128 (137)
T d2cm5a1          89 VWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKK  128 (137)
T ss_dssp             EEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCC
T ss_pred             eeeCCCCCCCCEEEEEEeCccccCcchhhhhhHhhCCCCe
Confidence            9999988889999999999998766643 34666655554

>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin IV
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.59  E-value=7.8e-16  Score=128.23  Aligned_cols=111  Identities=19%  Similarity=0.159  Sum_probs=84.8

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|+.|++|+.      .+..+.+||||+|.+........++||++++++.||.|||+|.|.+...++  ..|.|.
T Consensus        15 ~~L~V~v~~a~~L~~------~~~~~~~dpyvkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~i~   88 (138)
T d1w15a_          15 NTLTVVVLKARHLPK------SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFL   88 (138)
T ss_dssp             TEEEEEEEEEESCC------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEE
T ss_pred             CEEEEEEEEeECCCC------CCCCCCcCEEEEEEEeCCcccCccccceeECCCCCCeECcEEEEEecHHHhCccEEEEE
Confidence            469999999999963      233456899999999754444556789999999999999999999876554  469999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCcceE-EEccCCCCCc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGER  361 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~GyR~-vpL~d~~g~~  361 (374)
                      |||+|..+++++||++.|++.+...|.+| ..|++..+++
T Consensus        89 v~d~~~~~~~~~iG~~~i~l~~~~~~~~hW~~ll~~~~k~  128 (138)
T d1w15a_          89 VLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQ  128 (138)
T ss_dssp             EEECCTTSCCEEEEEEEESTTCCSHHHHHHHHHHHSTTCC
T ss_pred             EEeCCCCCCCCEEEEEEEcchhCCchHHHHHHHHhCCCCe
Confidence            99999888899999999999987666553 3444444443

>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Piccolo
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=1.3e-15  Score=127.07  Aligned_cols=108  Identities=19%  Similarity=0.259  Sum_probs=85.1

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCC---------ceeeeeeeccCCCCCccCcEEEEEeec-C
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD---------TVMKKTKTLEDNWIPSWNEEFEFPLSV-P  314 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d---------~~k~kTk~v~~~~nP~Wne~f~F~v~~-p  314 (374)
                      ..|.|+|+.|++|+.      .+..+.+||||+|.+......         ..++||++++++.||.|||+|.|.+.. .
T Consensus        18 ~~L~V~V~~A~~L~~------~d~~g~~DpyV~v~l~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~   91 (142)
T d1rh8a_          18 GNLIIHILQARNLVP------RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISME   91 (142)
T ss_dssp             TEEEEEEEEEESCCC------CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHH
T ss_pred             CEEEEEEEEeECCCC------cCCCCCCCcCEEEEEecCcccccccccCCCceeeeccCCcCCCCceeEEEEEEeeeccc
Confidence            469999999999964      234567899999998543222         234689999999999999999997432 2


Q ss_pred             --CccEEEEEEEeeCCCCCCCccEEEEEECccccCcc---eEEEccCCC
Q 017257          315 --ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK  358 (374)
Q Consensus       315 --ela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~Gy---R~vpL~d~~  358 (374)
                        ....|.|.|||+|..+++++||++.|+|..+..+-   .|.+|.++.
T Consensus        92 ~~~~~~L~i~V~d~d~~~~~~~lG~~~i~L~~l~~~~~~~~W~~L~~~~  140 (142)
T d1rh8a_          92 QLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT  140 (142)
T ss_dssp             HHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred             ccCCCEEEEEEEEecCCCCCeeeEEEEEEhHHcCCCCCceEEEECcCcC
Confidence              23579999999998888999999999999987653   578988764

>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin XIII
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9.2e-15  Score=121.69  Aligned_cols=105  Identities=19%  Similarity=0.176  Sum_probs=85.8

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|+.|.+|+.         .+.+||||+|.+.+. ....+++|++++++.||+|||+|.|.+...++  ..|+|+
T Consensus        26 ~~L~V~v~~a~~L~~---------~g~~dpyVkv~l~~~-~~~~~~kT~v~~~~~~P~wne~f~f~v~~~~l~~~~L~~~   95 (138)
T d1wfma_          26 AELFVTRLEAVTSNH---------DGGCDCYVQGSVANR-TGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLT   95 (138)
T ss_dssp             TEEEEEEEEEECCCC---------SSCCCEEEEEEEEET-TEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEE
T ss_pred             CEEEEEEEEcCCCCC---------CCCcCcEEEEEECCC-CCccceeeeEECCCCCceEeeeEEEEeeehhccceEEEEE
Confidence            579999999998742         234799999999753 23456789999999999999999999876654  679999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCc---ceEEEccCCCC
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKG  359 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~G---yR~vpL~d~~g  359 (374)
                      |||++..+++++||++.|+|..+..+   -.|..|.....
T Consensus        96 V~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~W~~L~~~~~  135 (138)
T d1wfma_          96 LRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSGP  135 (138)
T ss_dssp             EEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCSC
T ss_pred             EeeecccccceeeeEEEEEhHHccCCCCceEeEeCCCCCC
Confidence            99999888899999999999998644   35788876543

>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin III
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.57  E-value=3.4e-15  Score=123.07  Aligned_cols=105  Identities=21%  Similarity=0.223  Sum_probs=82.0

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|+.|++|+.      .+..+.+||||+|.+.+  ....++||++++++.||+|||+|.|.+..+++  ..|+|
T Consensus        17 ~~~L~V~V~~a~~L~~------~~~~g~~dpyv~v~l~~--~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~~~~~~L~v   88 (130)
T d1dqva1          17 SDQLVVRILQALDLPA------KDSNGFSDPYVKIYLLP--DRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHF   88 (130)
T ss_dssp             SCEEEEEEEEEECCCC------CSTTSCCCEEEEEECTT--STTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEE
T ss_pred             CCEEEEEEEeeeCCcc------ccCCCCcceEEEEEEcc--CCCceEeceeEcCCCCeeeeeEEEEEEchHHcCCCeEEE
Confidence            3579999999999963      23346689999999864  23456899999999999999999999876553  46999


Q ss_pred             EEEeeCCCCCCCccEEEEEECcc-ccCc----ceEEEccC
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSE-LKQG----IRAVPLHD  356 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~-L~~G----yR~vpL~d  356 (374)
                      +|||++..+++++||++.|++.. +...    -.|.+|.+
T Consensus        89 ~V~d~~~~~~d~~iG~~~i~~~~~l~~~~~~~~~W~~L~~  128 (130)
T d1dqva1          89 SVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILE  128 (130)
T ss_dssp             EEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBC
T ss_pred             EEEEcCCCCCCceEEEEEECchhhhhcCCCCCcEEEeccc
Confidence            99999988889999999998643 3221    23667765

>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptogamin I
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.56  E-value=2.4e-15  Score=128.06  Aligned_cols=98  Identities=19%  Similarity=0.262  Sum_probs=80.2

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE  322 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf~  322 (374)
                      ..|.|+|+.|++|+.      .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+++  ..|+|+
T Consensus        25 ~~L~V~V~~a~~L~~------~~~~~~~dpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~F~v~~~~l~~~~l~i~   98 (157)
T d1uowa_          25 GKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVT   98 (157)
T ss_dssp             TEEEEEEEEEESCCC------CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEE
T ss_pred             CEEEEEEEEEEEccc------ccCCCCCCeeEEEEEecCCccccceecccccCCCCcccCCeEEEEecHHHcCccEEEEE
Confidence            579999999999963      133457899999998753333345689999999999999999999877664  479999


Q ss_pred             EEeeCCCCCCCccEEEEEECccccCc
Q 017257          323 VHEYDMSEKDDFGGQTCLPVSELKQG  348 (374)
Q Consensus       323 V~D~d~~~~dd~iG~~~ipl~~L~~G  348 (374)
                      |||++..+++++||++.|++.+...+
T Consensus        99 v~d~~~~~~~~~iG~~~i~l~~~~~~  124 (157)
T d1uowa_          99 VLDYDKIGKNDAIGKVFVGYNSTGAE  124 (157)
T ss_dssp             EEECCSSSCCCEEEEEEEETTCCHHH
T ss_pred             EcccCCCCCCceeEEEEEecccCChh
Confidence            99999988899999999999876433

>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from protein kinase C epsilon
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.55  E-value=1.8e-14  Score=119.74  Aligned_cols=117  Identities=16%  Similarity=0.163  Sum_probs=88.0

Q ss_pred             ceEEEEEEEeccccccCC-----CCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccE
Q 017257          244 KKTLKVTVYMGEGWYYDF-----PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELAL  318 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~-----~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~  318 (374)
                      ...|+|+|+.|++|+...     ........+.+||||+|.+.+    ....+|+++.++.||+|||+|.|.+..+  ..
T Consensus         5 ~G~L~v~I~~A~~L~~~~~~~~~~~~~~~~~~~~DPYv~v~l~~----~~~~~T~~~~~t~~P~Wne~f~f~v~~~--~~   78 (136)
T d1gmia_           5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD----SRIGQTATKQKTNSPAWHDEFVTDVCNG--RK   78 (136)
T ss_dssp             EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT----EEEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred             EEEEEEEEEEeECCCcccccccccccccCCCCCcCcEEEEEeCC----CcCcEeeEEcCCCCccCccEEEEEEecC--Cc
Confidence            467999999999996310     000011235689999999953    3456899999999999999999998654  57


Q ss_pred             EEEEEEeeCCCCCCCccEEEEEECccccCc-----ceEEEccCCCCCccCCeEEEEEEEE
Q 017257          319 LRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF  373 (374)
Q Consensus       319 Lrf~V~D~d~~~~dd~iG~~~ipl~~L~~G-----yR~vpL~d~~g~~~~~~~L~v~i~f  373 (374)
                      |.|.|||++..+++++||.+.++|+.|..+     .+|++|.       +.+++.+.++|
T Consensus        79 l~i~V~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------p~G~v~l~v~~  131 (136)
T d1gmia_          79 IELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE-------PEGKVYVIIDL  131 (136)
T ss_dssp             EEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB-------SSCEEEEEEEE
T ss_pred             eEEEEEEecCCCCceeEEEEEEEHHHhhhcCCcceeEEEeCC-------CCcEEEEEEEE
Confidence            999999999888899999999999998432     2577884       23567777765

>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Regulating synaptic membrane exocytosis protein, rim2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=9.2e-15  Score=119.48  Aligned_cols=105  Identities=19%  Similarity=0.279  Sum_probs=78.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~pel--a~Lr  320 (374)
                      ...|.|+|+.|++|+.      .+..+.+||||+|.+........++||++++++.||.|||+|.|. +...++  ..|.
T Consensus        13 ~~~L~V~V~~a~~L~~------~~~~~~~dpyVkv~l~~~~~~~~~~kT~~~~~t~~P~wne~f~f~~~~~~~l~~~~L~   86 (125)
T d2bwqa1          13 GHQLIVTILGAKDLPS------REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLE   86 (125)
T ss_dssp             TTEEEEEEEEEESCCC------CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEE
T ss_pred             CCEEEEEEEEeECCCC------cCCCCCCCEEEEEEEeCCCCCccccccCEEcCCCCCEEccEEEEeeeChhhcCCCEEE
Confidence            3579999999999963      233467899999999754455667899999999999999999997 544443  4799


Q ss_pred             EEEEeeCCC--CCCCccEEEEEECccccCc-c-eEEEc
Q 017257          321 IEVHEYDMS--EKDDFGGQTCLPVSELKQG-I-RAVPL  354 (374)
Q Consensus       321 f~V~D~d~~--~~dd~iG~~~ipl~~L~~G-y-R~vpL  354 (374)
                      |.|||++..  .++++||++.++++.+... . .|.+|
T Consensus        87 i~v~d~~~~~~~~~~~iG~~~i~l~~~~~~~~~~Wy~L  124 (125)
T d2bwqa1          87 ITLWDQARVREEESEFLGEILIELETALLDDEPHWYKL  124 (125)
T ss_dssp             EEEEEC-------CEEEEEEEEEGGGCCCSSCEEEEEC
T ss_pred             EEEEECCCCCCCCCeeEEEEEEEchhcCCCCCCEEEeC
Confidence            999998864  3456999999999988633 2 35555

>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin IV
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.8e-14  Score=117.87  Aligned_cols=96  Identities=21%  Similarity=0.362  Sum_probs=76.9

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEE-eecCCc--cEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR  320 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~-v~~pel--a~Lr  320 (374)
                      ...|.|+|+.|++|+..    . .....+||||+|.+.+  ....++||++++++.||.|||+|.|. +...++  ..|+
T Consensus        21 ~~~L~V~V~~a~~L~~~----d-~~~~~~dpyV~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~L~   93 (138)
T d1ugka_          21 RKAFVVNIKEARGLPAM----D-EQSMTSDPYIKMTILP--EKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALH   93 (138)
T ss_dssp             GTEEEEEEEEEESCCCC----B-TTTTBCEEEEEEEEET--TTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEE
T ss_pred             CCEEEEEEEEecCCCCC----C-CCCCccceEEEEEEcC--CCCEeEeCeeEeCCCCCceeeEEEEeeeCHHHcccceEE
Confidence            35799999999999641    1 1123469999999974  33456899999999999999999996 443343  4799


Q ss_pred             EEEEeeCCCCCCCccEEEEEECcccc
Q 017257          321 IEVHEYDMSEKDDFGGQTCLPVSELK  346 (374)
Q Consensus       321 f~V~D~d~~~~dd~iG~~~ipl~~L~  346 (374)
                      |+|||+|..+++++||++.|+|+.+.
T Consensus        94 ~~V~d~d~~~~~~~iG~~~i~L~~~~  119 (138)
T d1ugka_          94 FTILSFDRFSRDDIIGEVLIPLSGIE  119 (138)
T ss_dssp             EEEEEECSSCCCCCCEEEEEECTTCC
T ss_pred             EEEEECCCCCCCcEEEEEEEEccccc
Confidence            99999998888999999999999974

>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Unc-13 homolog A
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.48  E-value=1.4e-13  Score=113.14  Aligned_cols=113  Identities=20%  Similarity=0.266  Sum_probs=84.5

Q ss_pred             eEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEE
Q 017257          245 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH  324 (374)
Q Consensus       245 ~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~  324 (374)
                      ..|.|+|..|+++..      .+   ..||||.|.+.+     .+.+|+++++ .||+|||+|.|.+..++ ..|.|+||
T Consensus         2 ~~L~V~v~~a~~l~~------~~---~~dpYv~l~~~~-----~k~~T~~~k~-~nP~Wne~f~f~v~~~~-~~L~v~V~   65 (128)
T d2cjta1           2 SLLCVGVKKAKFDGA------QE---KFNTYVTLKVQN-----VKSTTIAVRG-SQPSWEQDFMFEINRLD-LGLTVEVW   65 (128)
T ss_dssp             EEEEEEEEEEECSSC------GG---GCEEEEEEEETT-----EEEECCCEES-SSCEEEEEEEEEECCCS-SEEEEEEE
T ss_pred             eEEEEEEEEEECCCC------CC---CcCeEEEEEeCC-----EEEEEEEecC-CCCeEEEEEEEeecccc-ceEEEEEE
Confidence            368999999998853      12   369999999853     5788888764 59999999999998776 45889999


Q ss_pred             eeCCCCCCCccEEEEEECccccC----cc-eEEEccC----CCCCcc-----CCeEEEEEEEEC
Q 017257          325 EYDMSEKDDFGGQTCLPVSELKQ----GI-RAVPLHD----RKGERY-----KSVKLLMHFEFI  374 (374)
Q Consensus       325 D~d~~~~dd~iG~~~ipl~~L~~----Gy-R~vpL~d----~~g~~~-----~~~~L~v~i~f~  374 (374)
                      |++.. .|++||++.|||+.+..    |. .|.+|..    ..|+..     .+.+|++...|.
T Consensus        66 d~~~~-~d~~lG~~~I~L~~l~~~~~~~~~~W~~L~~~~~~~~gei~gt~~~~~~~~ll~~~~~  128 (128)
T d2cjta1          66 NKGLI-WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE  128 (128)
T ss_dssp             ECCSS-CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEEC
T ss_pred             eCCCc-CCcceEEEEEEehhhccCCCCCCCeeEECCccccCCCCEEEeeecCCCcEEEEEEEcC
Confidence            99876 58999999999999863    22 5888853    224432     246788887763

>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: Synaptotagmin III
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.45  E-value=9.9e-15  Score=122.37  Aligned_cols=112  Identities=17%  Similarity=0.192  Sum_probs=86.7

Q ss_pred             ceEEEEEEEeccccccCCCCCcccCCCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCc--cEEEE
Q 017257          244 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI  321 (374)
Q Consensus       244 ~~~L~V~Visa~~l~~~~~~~~~~~~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pel--a~Lrf  321 (374)
                      ...|.|+|+.|++|+.      .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++  ..|.|
T Consensus        19 ~~~L~V~V~~a~nL~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~~~~~t~~P~wne~f~F~v~~~~~~~~~l~v   92 (145)
T d1dqva2          19 AGLLTVTIIKASNLKA------MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSI   92 (145)
T ss_dssp             TTEEEEEEEEEESCCC------CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCC
T ss_pred             CCEEEEEEEEEeCCCC------cCCCCCcCceEEEEEccCCccceeecCEEEeCCCCceecceEEEEEehhhcCCCEEEE
Confidence            3579999999999963      233456799999999865555557899999999999999999998865433  56999


Q ss_pred             EEEeeCCCCCCCccEEEEEECccccC-cce-EEEccCCCCCc
Q 017257          322 EVHEYDMSEKDDFGGQTCLPVSELKQ-GIR-AVPLHDRKGER  361 (374)
Q Consensus       322 ~V~D~d~~~~dd~iG~~~ipl~~L~~-GyR-~vpL~d~~g~~  361 (374)
                      .|||++..+++++||++.|++..+.. |.. |..|.+.-+++
T Consensus        93 ~v~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~l~~~p~~~  134 (145)
T d1dqva2          93 AVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKP  134 (145)
T ss_dssp             EEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSC
T ss_pred             EEEecCCCCCCcEEEEEEECchHcCchhhHHHHHHHhCCCCe
Confidence            99999988889999999999988742 433 33555544444

>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from protein kinase C delta
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.36  E-value=2.9e-12  Score=104.38  Aligned_cols=93  Identities=15%  Similarity=0.178  Sum_probs=73.3

Q ss_pred             CCCCCceEEEEEecCCCCceeeeeeeccCCCCCccCcEEEEEeecCCccEEEEEEEeeCCCCCCCccEEEEEECcccc--
Q 017257          269 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK--  346 (374)
Q Consensus       269 ~s~~DpyV~V~i~g~~~d~~k~kTk~v~~~~nP~Wne~f~F~v~~pela~Lrf~V~D~d~~~~dd~iG~~~ipl~~L~--  346 (374)
                      .+..||||+|.+.+......+++|++++++.||+|||+|+|.+..  ...|.|.|||+|    ++++|.+.+++..|.  
T Consensus        21 ~~~~dPY~~v~l~~~~~~~~~~~t~~~kkT~nP~WnE~F~~~v~~--~~~l~i~V~d~d----d~~~g~~~i~l~~l~~~   94 (123)
T d1bdya_          21 DDASQPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA----EDPMSEVTVGVSVLAER   94 (123)
T ss_dssp             CCSCCCEEEEEEEEECCGGGTTBEEECSCCBCCCTTCEEEEECCT--TCEEEEEEEEET----TEEEEEEEEEHHHHHHH
T ss_pred             CCCCCCEEEEEEcCccccccceEEEEeCCCCCcccceEEEEEEcc--ccEEEEEEEEcc----ccccCccEEehhheeec
Confidence            466899999999765444455678999999999999999998864  357999999976    689999999998873  


Q ss_pred             ---Ccc---eEEEccCCCCCccCCeEEEEEEEEC
Q 017257          347 ---QGI---RAVPLHDRKGERYKSVKLLMHFEFI  374 (374)
Q Consensus       347 ---~Gy---R~vpL~d~~g~~~~~~~L~v~i~f~  374 (374)
                         .|-   .|++|.       +.+.|.+.++||
T Consensus        95 ~~~~~~~~~~W~~L~-------~~Gkl~l~v~~f  121 (123)
T d1bdya_          95 CKKNNGKAEFWLDLQ-------PQAKVLMCVQYF  121 (123)
T ss_dssp             HHTTTTEEEEEEECB-------SSCEEEEEEEEE
T ss_pred             cccCCCcccEEEeCC-------CCEEEEEEEEEe
Confidence               233   466773       245788888885