Citrus Sinensis ID: 017289

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
Protein Sequence
MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHcccccccccccccccHHHHccccccccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHccccccccccEEEEccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccEEEEEEEccccccccccHHHHcccccccccccccccccccccHHHHHHHHHccHHHHHHccccccEEEEEEEEccccccccccccccHHHHHHHHccccccccccEEHHccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHccccccccccccccccccccccccHHHHccccccccEEEEEEEEcccEEccccccccccHHHHHHHHHHHHHHHccccHHHHcHEEEcHHcHcccccHHHHHHHHHHccccccccEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEEEEEEHHHHcccccccccccccHHHcHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEccEEEcccccccccccEEEEcccccccccccHHHHccccEccccccccEcccEcccEEEEEEEEEEEHHHHHHccccccEEEEEEEEEEccHHHHHHcHHHHHHHHHHHHcccHHHccEEEEccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MEKALHRQRILLQhlqpsssqtsdspaisASICSageaagyhrkpafdddVVIVAAYRTAICKAkrggfkdtladDLLAPVLKAVIEKtrlnpsevgdivvgtvlapgstRAMECRMAAfyagfpetvplrtvnrqCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISvvgqvnpkveiftqardcllpmgitsenvaqrfgvtrqeqDLAAVESHRRAAAAtasgkfkdeiipvntkivdpktgveKRVTISvddgirpnttiADLAKlkpafkkdgtttagnasqvsdgAGAVLLMKRSLAvqkglpilgvfrsfsavgvdpsvmgigpavAIPAAVksaglqiddinlfEINEVLVPIIAANIMVN
Flexible Loop (DISEMBL)
MEKALHRQRILLqhlqpsssqtsdsPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKakrggfkdtlaDDLLAPVLKAVIEktrlnpsevgdivvGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAaatasgkfkdeiipvntkivdpktgvekrvtisvddgirpnttiadlaklkpafkkdgtttagnasqvsdGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN
Low Complexity Region (SEG)
MEKAlhrqrillqhlqPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLaaveshrraaaatasGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN
Disordered region (IsUnstruct)
*******************************ICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT**********************KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK*******************GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIM**
Disordered Region (DISOPRED)
*****HR*RILL**********************************FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI****QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN
Disordered Region (DISEMBL)
********RILLQHL*************SASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ*******************GKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN
Disordered Region (DISPRO)
****LHR******HL******************************AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	374	2.2.26 [Sep-21-2011]
Q56WD9	462	3-ketoacyl-CoA thiolase 2	yes	no	0.970	0.785	0.766	1e-160
Q8LF48	443	3-ketoacyl-CoA thiolase 1	no	no	0.951	0.803	0.743	1e-152
Q570C8	457	3-ketoacyl-CoA thiolase 5	no	no	0.962	0.787	0.701	1e-147
P07871	424	3-ketoacyl-CoA thiolase B	yes	no	0.930	0.820	0.540	1e-102
Q921H8	424	3-ketoacyl-CoA thiolase A	yes	no	0.927	0.818	0.538	1e-101
Q8VCH0	424	3-ketoacyl-CoA thiolase B	yes	no	0.930	0.820	0.540	1e-101
P21775	424	3-ketoacyl-CoA thiolase A	yes	no	0.930	0.820	0.532	1e-100
P09110	424	3-ketoacyl-CoA thiolase,	yes	no	0.930	0.820	0.512	6e-98
Q05493	414	3-ketoacyl-CoA thiolase,	yes	no	0.828	0.748	0.523	3e-79
P33291	408	3-ketoacyl-CoA thiolase B	N/A	no	0.826	0.757	0.495	6e-77

>sp|Q56WD9|THIK2_ARATH 3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2

 Score =  565 bits (1456), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 279/364 (76%), Positives = 321/364 (88%), Gaps = 1/364 (0%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
           MEKA+ RQR+LL+HL+PSSS + +  A +SAS C AG++A Y R   + DDVVIVAA+RT
Sbjct: 1   MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60

Query: 60  AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
            +CK+KRG FKDT  DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAA
Sbjct: 61  PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120

Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
           FYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++  G VN
Sbjct: 121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180

Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
           P V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD AAV+SHR+AAAATA+GKFKDEIIP
Sbjct: 181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240

Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
           V TK+VDPKTG EK +T+SVDDGIRP TT+A L KLKP FKKDGTTTAGN+SQVSDGAGA
Sbjct: 241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300

Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
           VLLMKRS+A+QKGLP+LGVFR+F+AVGVDP++MGIGPAVAIPAAVK+AGL++DDI+LFEI
Sbjct: 301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360

Query: 360 NEVL 363
           NE  
Sbjct: 361 NEAF 364

Involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Confers sensitivity to 2,4-dichlorophenoxybutiric acid (2,4-DB). Required for local and systemic induction of jasmonic acid (JA) biosynthesis after wounding. Seems to be involved in JA biosynthesis during senescence.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 6

>sp|Q8LF48|THIK1_ARATH 3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2

 Score =  536 bits (1382), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 270/363 (74%), Positives = 312/363 (85%), Gaps = 7/363 (1%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKA  RQRILL+HLQPSSS  +   ++SAS C + ++A Y     + DDVVIVAA RTA
Sbjct: 1   MEKATERQRILLRHLQPSSSSDA---SLSASACLSKDSAAYQ----YGDDVVIVAAQRTA 53

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           +CKAKRG FKDT  D+LLA VL+A+IEKT +NPSEVGDIVVGTVL PGS RA ECRMAAF
Sbjct: 54  LCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAF 113

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N     G VNP
Sbjct: 114 YAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVNP 173

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
            V+ F QA +CLLPMGITSENVA RF V+R+EQD AAV+SHR+AA+ATASGKFKDEI PV
Sbjct: 174 NVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITPV 233

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
            TKIVDPKTG EK +T+SVDDGIRPNTT++ LAKLKP FK+DGTTTAGN+SQ+SDGAGAV
Sbjct: 234 KTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGAV 293

Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
           LLM+R++A+QKGLPILGVFR+FSAVGVDP++MG+GPAVAIPAAVK+AGL+++D++LFEIN
Sbjct: 294 LLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEIN 353

Query: 361 EVL 363
           E  
Sbjct: 354 EAF 356

Involved in fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Implicated in jasmonic acid (JA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|Q570C8|THIK5_ARATH 3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2

 Score =  520 bits (1340), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/368 (70%), Positives = 307/368 (83%), Gaps = 8/368 (2%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSD---SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
           ME+A+ RQ+ILL+HL P SS  S     P++ + +    E +      AF DD+VIVAAY
Sbjct: 1   MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSPM---AAFGDDIVIVAAY 57

Query: 58  RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
           RTAICKA+RGGFKDTL DDLLA VLKAV+E+T L+PSEVGDIVVGTV+APGS RAMECR+
Sbjct: 58  RTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRV 117

Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG- 176
           AA++AGFP++VP+RTVNRQCSSGLQAVADVA +I+AG YDIGI AG+ESM+ + I   G 
Sbjct: 118 AAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGGF 177

Query: 177 -QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKD 235
              NP+ + F +ARDCLLPMGITSENVA+RFGVTR+EQD+AAVESH+RAAAA ASGK KD
Sbjct: 178 HGSNPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKLKD 237

Query: 236 EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 295
           EIIPV TKIVDP+T  EK + +SVDDG+RPN+ +ADLAKLK  FK++G+TTAGNASQ+SD
Sbjct: 238 EIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQISD 297

Query: 296 GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355
           GAGAVLLMKRSLA++KGLPILGVFRSF+  GV+PSVMGIGPAVAIPAA K AGL + DI+
Sbjct: 298 GAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDID 357

Query: 356 LFEINEVL 363
           LFEINE  
Sbjct: 358 LFEINEAF 365

Probably involved in long chain fatty-acid beta-oxidation prior to gluconeogenesis during germination and subsequent seedling growth. Involved in systemic jasmonic acid (JA) biosynthesis after wounding and may be during senescence.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 259/359 (72%), Gaps = 11/359 (3%)

Query: 5   LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
           +HR +++L HL   + ++  S A+ A+ CSAG         A   DVV+V   RT I +A
Sbjct: 1   MHRLQVVLGHL---AGRSESSSALQAAPCSAG------FPQASASDVVVVHGRRTPIGRA 51

Query: 65  KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
            RGGFKDT  D+LL+ VL AV++  +L P  +GDI VG VL PG+  AM  R+A F +G 
Sbjct: 52  GRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAM-ARIAQFLSGI 110

Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
           PETVPL  VNRQCSSGLQAVA++A  I+ G YDIG+A G+ESMT++     G ++ ++  
Sbjct: 111 PETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLLE 170

Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
             +ARDCL+PMGITSENVA+RFG++RQ+QD  A+ S ++AA+A + G F+ EI+PV T +
Sbjct: 171 NEKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTV 230

Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
           +D K G  K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +
Sbjct: 231 LDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLAR 289

Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           RS A + GLPILGV RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINE  
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAF 348

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|Q921H8|THIKA_MOUSE 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1

 Score =  370 bits (950), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/360 (53%), Positives = 261/360 (72%), Gaps = 13/360 (3%)

Query: 5   LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKP-AFDDDVVIVAAYRTAICK 63
           +HR +++L HL   + +   S A+ A+ CSA       R P A   DVV+V   RT I +
Sbjct: 1   MHRLQVVLGHL---AGRPESSSALQAAPCSA-------RFPQASASDVVVVHGRRTPIGR 50

Query: 64  AKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG 123
           A RGGFK+T  D+LL+ VL AV++  RL P ++GDI VG VL PG+   M  R+A F +G
Sbjct: 51  ASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVM-ARIAQFLSG 109

Query: 124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVE 183
            PETVPL TVNRQCSSGLQAVA++A  I+ G YDIG+A G+ESM+++ +   G ++ ++ 
Sbjct: 110 IPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSRLL 169

Query: 184 IFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTK 243
              +ARDCL PMG+TSENVA+RFG++RQ+QD  A+ S ++AA+A + G F+ EI+PV T 
Sbjct: 170 ESEKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTT 229

Query: 244 IVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLM 303
           ++D K G +K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL 
Sbjct: 230 VLDDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLA 288

Query: 304 KRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           +RS A + GLPILGV RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINE  
Sbjct: 289 RRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAF 348

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|Q8VCH0|THIKB_MOUSE 3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1

 Score =  368 bits (944), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/359 (54%), Positives = 259/359 (72%), Gaps = 11/359 (3%)

Query: 5   LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
           +HR +++L HL   + +   S A+ A+ CSAG         A   DVV+V   RT I +A
Sbjct: 1   MHRLQVVLGHL---AGRPESSSALQAAPCSAGFLQ------ASASDVVVVHGRRTPIGRA 51

Query: 65  KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
            RG FKDT  D+LL+ VL AV++  +L P ++GDI VG VL PG+  A+  R+A F +G 
Sbjct: 52  SRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAG-AIMARIAQFLSGI 110

Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
           PETVPL TVNRQCSSGLQAVA++A  I+ G YDIG+A G+ESMT++     G ++ ++  
Sbjct: 111 PETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSRLLE 170

Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
             +ARDCL+PMGITSENVA+RFGV+RQ+QD  A+ S ++AA+A + G F  EI+PV T +
Sbjct: 171 NEKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVTTTV 230

Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
           ++ K G +K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +
Sbjct: 231 LNDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLAR 289

Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           RS A + GLPILGV RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINE  
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAF 348

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2

 Score =  364 bits (935), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/359 (53%), Positives = 257/359 (71%), Gaps = 11/359 (3%)

Query: 5   LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
           +HR +++L HL   + +   S A+ A+ CSA          A   DVV+V   RT I +A
Sbjct: 1   MHRLQVVLGHL---AGRPESSSALQAAPCSA------TFPQASASDVVVVHGRRTPIGRA 51

Query: 65  KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
            RGGFKDT  D+LL+ VL AV++  +L P  +GDI VG VL PG+   M  R+A F +G 
Sbjct: 52  GRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVM-ARIAQFLSGI 110

Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
           PETVPL  VNRQCSSGLQAVA++A  I+ G YDIG+A G+ESM++++    G ++ ++  
Sbjct: 111 PETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSNRGNPGNISSRLLE 170

Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
             +ARDCL+PMGITSENVA+RFG++RQ+QD  A+ S ++AA+A + G F+ EI+PV T +
Sbjct: 171 SDKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTV 230

Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
           +D K G  K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +
Sbjct: 231 LDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLAR 289

Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           RS A + GLPILGV RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINE  
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAF 348

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|P09110|THIK_HUMAN 3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2

 Score =  357 bits (917), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 184/359 (51%), Positives = 253/359 (70%), Gaps = 11/359 (3%)

Query: 5   LHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKA 64
           + R +++L HL+   + +   P  +  +  A +A+          DVV+V   RTAIC+A
Sbjct: 1   MQRLQVVLGHLR-GPADSGWMPQAAPCLSGAPQASAA--------DVVVVHGRRTAICRA 51

Query: 65  KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF 124
            RGGFKDT  D+LL+ V+ AV++   L P ++GDI VG VL PG+  A+  R+A F +  
Sbjct: 52  GRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAG-AIMARIAQFLSDI 110

Query: 125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEI 184
           PETVPL TVNRQCSSGLQAVA +A  I+ G YDIG+A G+ESM++      G +  ++  
Sbjct: 111 PETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLME 170

Query: 185 FTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI 244
             +ARDCL+PMGITSENVA+RFG++R++QD  A+ S ++AA A + G F+ EI+PV T +
Sbjct: 171 KEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTV 230

Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
            D K G ++ +T++ D+GIRP+TT+  LAKLKPAFKKDG+TTAGN+SQVSDGA A+LL +
Sbjct: 231 HDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLAR 289

Query: 305 RSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           RS A + GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL + D+++FEINE  
Sbjct: 290 RSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAF 348

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|Q05493|THIK_YARLI 3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=POT1 PE=3 SV=1

 Score =  295 bits (756), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 167/319 (52%), Positives = 221/319 (69%), Gaps = 9/319 (2%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
           DDVVI AAYRTA  K  +G FKDT + +LLA +L+ ++++++++P  +GD+V G VLA G
Sbjct: 28  DDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAG 87

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
           +  A E R A   AG PETVP   +NRQCSSGL AV DVA  I+AG  DIGI  G+ESM+
Sbjct: 88  AG-ATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMS 146

Query: 169 V----NSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRA 224
                NS++     + K +   +A+ CL+PMGITSENVA ++ V+R+ QD  A +S+ +A
Sbjct: 147 NQYGPNSVT---PFSNKFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQDAFAAKSYEKA 203

Query: 225 AAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284
           AAA A+GKF  EI+P+ T ++D     EK VT++ DDGIRP  T   L KLKPAF  +GT
Sbjct: 204 AAAQAAGKFDQEILPIKTTVLDDDDN-EKEVTVNKDDGIRPGVTAEKLGKLKPAFSAEGT 262

Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
           T AGNASQ+SDGAGAVLLM+RS+A + G PIL  F     VGV P +MGIGPA AIPA +
Sbjct: 263 THAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPAVL 322

Query: 345 KSAGLQIDDINLFEINEVL 363
           +  GL ++D+++FEINE  
Sbjct: 323 EDLGLTVNDVDVFEINEAF 341

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

>sp|P33291|THIKB_CANTR 3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1

 Score =  288 bits (736), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 158/319 (49%), Positives = 206/319 (64%), Gaps = 10/319 (3%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--A 106
           DDVVIVAAYRTAI K  +G F++  ++ +L   LK  I+KT ++PS + D+ +G VL  A
Sbjct: 25  DDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQA 84

Query: 107 PGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166
            G+T   E R A   AG P T     VNR CSSGL A++D+A  IK G  + G+A G ES
Sbjct: 85  AGAT---EHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAES 141

Query: 167 MTVN--SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRA 224
           M+ N     V  +++P +    Q   CL+PMGIT+ENVA +F ++R+ QD  A +S+ +A
Sbjct: 142 MSTNYRDPRVAPRIDPHLADDAQMEKCLIPMGITNENVANQFNISRERQDEFAAKSYNKA 201

Query: 225 AAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT 284
           A A ASG FK EI+P+ + I+    G EK + +  D+G R   T   L KL+PAF  DGT
Sbjct: 202 AKAVASGAFKSEILPIRS-IIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAF--DGT 258

Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
           TTAGNASQVSDGA AVLLMKRSLA  KG PI+G +   S  GV P +MG+GPA AIP  +
Sbjct: 259 TTAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAFAIPEVL 318

Query: 345 KSAGLQIDDINLFEINEVL 363
           K  GL +DDI++FEINE  
Sbjct: 319 KRTGLTVDDIDVFEINEAF 337

Candida tropicalis (taxid: 5482)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
440808089	464	3-ketoacyl-CoA thiolase 2 [Rehmannia glu	0.970	0.782	0.797	1e-168
442569925	464	3-ketoacyl-CoA thiolase 1 [Rehmannia glu	0.970	0.782	0.795	1e-167
225433424	461	PREDICTED: 3-ketoacyl-CoA thiolase 2, pe	0.970	0.787	0.801	1e-167
147866537	461	hypothetical protein VITISV_023191 [Viti	0.970	0.787	0.801	1e-166
326493512	401	predicted protein [Hordeum vulgare subsp	0.970	0.905	0.776	1e-166
449432452	462	PREDICTED: 3-ketoacyl-CoA thiolase 2, pe	0.970	0.785	0.776	1e-165
257815407	462	3-ketoacyl CoA thiolase 1 [Petunia x hyb	0.970	0.785	0.799	1e-165
356575164	461	PREDICTED: 3-ketoacyl-CoA thiolase 2, pe	0.970	0.787	0.774	1e-164
242039477	462	hypothetical protein SORBIDRAFT_01g02015	0.970	0.785	0.788	1e-163
223950105	461	unknown [Zea mays] gi|413934107|gb|AFW68	0.970	0.787	0.782	1e-163

>gi|440808089|gb|AGC24176.1| 3-ketoacyl-CoA thiolase 2 [Rehmannia glutinosa]

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/366 (79%), Positives = 326/366 (89%), Gaps = 3/366 (0%)

Query: 1   MEKALHRQRILLQHLQPS--SSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
           MEKA  RQR+LLQHL+PS  SS   D   ++SASICSAG++A YHR   F DDVVIVAAY
Sbjct: 1   MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60

Query: 58  RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
           RTA+CK+KRGGFKDT  DDLLAPVL+AV+EKT +NP+EVGDIVVGTVLAPGS RA ECRM
Sbjct: 61  RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120

Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ 177
           AAFYAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMTVN ++  G 
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180

Query: 178 VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEI 237
           VNP+V+   QA+DCLLPMGITSENVA RFGVTRQEQD AAV+SHR+AAAATASGKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240

Query: 238 IPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297
           IPV TKIVDPK+G EK VTISVDDGIRPNT++ADL KLKP FKKDG+TTAGN+SQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300

Query: 298 GAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357
           GAVLLMKRS+A+QKGLPILGVFRSF+AVGVDP++MG+GPAVAIPAAVKSAGL++ DI+LF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360

Query: 358 EINEVL 363
           EINE  
Sbjct: 361 EINEAF 366

Source: Rehmannia glutinosa

Species: Rehmannia glutinosa

Genus: Rehmannia

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|442569925|gb|AGC59769.1| 3-ketoacyl-CoA thiolase 1 [Rehmannia glutinosa]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/366 (79%), Positives = 326/366 (89%), Gaps = 3/366 (0%)

Query: 1   MEKALHRQRILLQHLQPS--SSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
           MEKA  RQR+LLQHL+PS  SS   D   ++SASICSAG++A YHR   F DDVVIVAAY
Sbjct: 1   MEKATERQRVLLQHLRPSFTSSSLEDIESSVSASICSAGDSAAYHRSSVFGDDVVIVAAY 60

Query: 58  RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
           RTA+CK+KRGGFKDT  DDLLAPVL+AV+EKT +NP+EVGDIVVGTVLAPGS RA ECRM
Sbjct: 61  RTALCKSKRGGFKDTYPDDLLAPVLRAVVEKTNVNPNEVGDIVVGTVLAPGSQRASECRM 120

Query: 118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ 177
           AAFYAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMTVN ++  G 
Sbjct: 121 AAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTVNPMAWEGS 180

Query: 178 VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEI 237
           VNP+V+   QA+DCLLPMGITSENVA RFGVTRQEQD AAV+SHR+AAAATASGKFKDEI
Sbjct: 181 VNPRVKSMAQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVDSHRKAAAATASGKFKDEI 240

Query: 238 IPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGA 297
           IPV TKIVDPK+G EK VTISVDDGIRPNT++ADL KLKP FKKDG+TTAGN+SQVSDGA
Sbjct: 241 IPVKTKIVDPKSGDEKPVTISVDDGIRPNTSVADLGKLKPVFKKDGSTTAGNSSQVSDGA 300

Query: 298 GAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF 357
           GAVLLMKRS+A+QKGLPILGVFRSF+AVGVDP++MG+GPAVAIPAAVKSAGL++ DI+LF
Sbjct: 301 GAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPAIMGVGPAVAIPAAVKSAGLELGDIDLF 360

Query: 358 EINEVL 363
           E+NE  
Sbjct: 361 EVNEAF 366

Source: Rehmannia glutinosa

Species: Rehmannia glutinosa

Genus: Rehmannia

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433424|ref|XP_002285653.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal isoform 1 [Vitis vinifera] gi|297741919|emb|CBI33354.3| unnamed protein product [Vitis vinifera]

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/363 (80%), Positives = 327/363 (90%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKA++RQR+LLQHL PSSS   D  ++SAS+C AG++A Y R   F DDVVIVAAYRTA
Sbjct: 1   MEKAINRQRVLLQHLSPSSSAAEDESSLSASVCVAGDSAAYQRTSVFGDDVVIVAAYRTA 60

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           +CK+KRGGFKDT  DDLLAPVL+A++EKT LNP+EVGDIVVGTVLAPGS RA ECRMAAF
Sbjct: 61  LCKSKRGGFKDTYPDDLLAPVLRALLEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAAF 120

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++  G +NP
Sbjct: 121 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSINP 180

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
           KV+ F QA+DCLLPMGITSENVA RFGVTRQEQD AAVESH+RAAAATA+GKFKDEIIPV
Sbjct: 181 KVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIPV 240

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
           +TKIVDPKTG EK VTISVDDGIRPN T++DLAKLKP FKK+GTTTAGN+SQVSDGAGAV
Sbjct: 241 STKIVDPKTGDEKLVTISVDDGIRPNATMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 300

Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
           LLMKRS+A++KGLPILGVFR+F+AVGVDP+VMGIGPAVAIPAAVKSAGL++DDI+LFEIN
Sbjct: 301 LLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 360

Query: 361 EVL 363
           E  
Sbjct: 361 EAF 363

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866537|emb|CAN81585.1| hypothetical protein VITISV_023191 [Vitis vinifera]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 291/363 (80%), Positives = 326/363 (89%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKA++RQR+LLQHL PSSS   D  ++SAS+C AG++A Y R   F DDVVIVAAYRTA
Sbjct: 1   MEKAINRQRVLLQHLSPSSSAAEDESSLSASVCVAGDSAAYQRTSVFGDDVVIVAAYRTA 60

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           +CK+KRGGFKDT  DDLLAPVL+A+IEKT LNP+EVGDIVVGTVLAPGS RA ECRMAAF
Sbjct: 61  LCKSKRGGFKDTYPDDLLAPVLRALIEKTNLNPNEVGDIVVGTVLAPGSQRASECRMAAF 120

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++  G +NP
Sbjct: 121 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSINP 180

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
           KV+ F QA+DCLLPMGITSENVA RFGVTRQEQD AAVESH+RAAAATA+GKFKDEIIPV
Sbjct: 181 KVKEFVQAQDCLLPMGITSENVAHRFGVTRQEQDQAAVESHKRAAAATATGKFKDEIIPV 240

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
           +TKIVDPKTG EK VTISVDDGIRPN  ++DLAKLKP FKK+GTTTAGN+SQVSDGAGAV
Sbjct: 241 STKIVDPKTGDEKPVTISVDDGIRPNAIMSDLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 300

Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
           LLMKRS+A++KGLPILGVFR+F+AVGVDP+VMGIGPAVAIPAAVKSAGL++DDI+LFEIN
Sbjct: 301 LLMKRSVAMRKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKSAGLELDDIDLFEIN 360

Query: 361 EVL 363
           E  
Sbjct: 361 EAF 363

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326493512|dbj|BAJ85217.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326515882|dbj|BAJ87964.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 282/363 (77%), Positives = 328/363 (90%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKAL RQRILL+HL+P++     + A+SAS+C+AG++A YHR P F DD+VIVAAYRTA
Sbjct: 1   MEKALDRQRILLRHLEPAAGANPTASAVSASVCAAGDSAAYHRGPCFADDIVIVAAYRTA 60

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           ICKAKRG FKDTL +DLL PV KA++EKT+LNPSEVGDIVVGTVLAPGS RA+ECRMAA 
Sbjct: 61  ICKAKRGSFKDTLPEDLLVPVFKALVEKTKLNPSEVGDIVVGTVLAPGSQRAIECRMAAL 120

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFP+TVPL+TVNRQCSSGLQAVADVA AIKAG+YDIGIAAG+ESMTVN + +VG+VNP
Sbjct: 121 YAGFPDTVPLKTVNRQCSSGLQAVADVAAAIKAGMYDIGIAAGVESMTVNKVDLVGKVNP 180

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
           KVE+F QARDCLLPMG+TSENVAQRFG+TR EQD AAVESHR+AAAA A+GKFK+EI+PV
Sbjct: 181 KVELFAQARDCLLPMGLTSENVAQRFGITRMEQDQAAVESHRKAAAAVAAGKFKEEIVPV 240

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
           +TKIVDPKTG EK + +S DDGIR NTT+A L+KLKPAF KDGTTTAGNASQVSDGAGAV
Sbjct: 241 HTKIVDPKTGEEKEIVVSADDGIRSNTTLAVLSKLKPAFSKDGTTTAGNASQVSDGAGAV 300

Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
           LLM+R +A QKGLPILG++RSF+AVGVDP+VMG+GPAVAIPAAVK+AGLQI+D++LFEIN
Sbjct: 301 LLMRRDVATQKGLPILGIYRSFAAVGVDPAVMGVGPAVAIPAAVKAAGLQINDVDLFEIN 360

Query: 361 EVL 363
           E  
Sbjct: 361 EAF 363

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432452|ref|XP_004134013.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|449487514|ref|XP_004157664.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Cucumis sativus] gi|393707|emb|CAA47926.1| 3-ketoacyl-CoA thiolase [Cucumis sativus]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 282/363 (77%), Positives = 325/363 (89%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKA++RQ ILL HL+PSSS  ++  ++SAS+C+AG++A Y R   F DDVVIVAAYRTA
Sbjct: 1   MEKAINRQSILLHHLRPSSSAYTNESSLSASVCAAGDSASYQRTSVFGDDVVIVAAYRTA 60

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           ICK+KRGGFKDT  DDLLAPVLKA+IEKT LNPSEVGDIVVG+VLAPGS RA ECRMAAF
Sbjct: 61  ICKSKRGGFKDTYPDDLLAPVLKALIEKTNLNPSEVGDIVVGSVLAPGSQRASECRMAAF 120

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFPETVP+RTVNRQCSSGLQAVADVA AI+AG YDIGI AGLESMT N ++  G VNP
Sbjct: 121 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMAWEGSVNP 180

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
           +V+    A++CLLPMG+TSENVAQRFGV+R++QD AA+ESHR+AAAATASGKFKDEIIPV
Sbjct: 181 RVKSIENAQNCLLPMGVTSENVAQRFGVSREKQDQAAIESHRKAAAATASGKFKDEIIPV 240

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
           +TKI+DPKTG EK VTISVDDGIRPNTT ADL KLK  FKKDGTTTAGN+SQVSDGAGAV
Sbjct: 241 STKIIDPKTGQEKPVTISVDDGIRPNTTQADLGKLKAVFKKDGTTTAGNSSQVSDGAGAV 300

Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
           LLMKRS+A++KGLPILGVFR+FSAVGVDP++MG+GPAVAIPAAVK+AGL+++DI+LFEIN
Sbjct: 301 LLMKRSVAMRKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDIDLFEIN 360

Query: 361 EVL 363
           E  
Sbjct: 361 EAF 363

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|257815407|gb|ACV70032.1| 3-ketoacyl CoA thiolase 1 [Petunia x hybrida]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 291/364 (79%), Positives = 319/364 (87%), Gaps = 1/364 (0%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
           MEKA+ RQR+LL+HLQP    T D S +++ SIC+AG++A Y R  AF DDVVIVAAYRT
Sbjct: 1   MEKAIQRQRVLLEHLQPIRHHTHDHSSSLTTSICAAGDSAAYQRTAAFGDDVVIVAAYRT 60

Query: 60  AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
           AICK+KRGGFKDTL+DDLLAPVLKAVIEKT L+P EVGDIVVGTVLAPGS RAMECRMAA
Sbjct: 61  AICKSKRGGFKDTLSDDLLAPVLKAVIEKTNLDPKEVGDIVVGTVLAPGSIRAMECRMAA 120

Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
           FYAGFPETVP+RTVNRQCSSGLQAVADVA +IKAG YDIGI AGLE MTV++I  V Q N
Sbjct: 121 FYAGFPETVPIRTVNRQCSSGLQAVADVAASIKAGFYDIGIGAGLELMTVDNIGRVQQRN 180

Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
            KV+ F QARDCLLPMGITSENVAQRFGVTR EQD AAV SH+RAAAATASGKFKDEIIP
Sbjct: 181 TKVDTFAQARDCLLPMGITSENVAQRFGVTRLEQDQAAVNSHQRAAAATASGKFKDEIIP 240

Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
           V TKIVDP+TG EK V ISVDDGIRPNT +  L KLKPAFK DGTTTAGNASQVSDGA A
Sbjct: 241 VLTKIVDPQTGKEKPVVISVDDGIRPNTNLTSLGKLKPAFKNDGTTTAGNASQVSDGAAA 300

Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
           VLLMKRS+A++KGLPILGVFRSF+AVGVDP+VMGIGPAVAIP AVKSAGL +DDI+L+EI
Sbjct: 301 VLLMKRSVAMKKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPPAVKSAGLDLDDIDLYEI 360

Query: 360 NEVL 363
           NE  
Sbjct: 361 NEAF 364

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575164|ref|XP_003555712.1| PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Glycine max]

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/364 (77%), Positives = 320/364 (87%), Gaps = 1/364 (0%)

Query: 1   MEKALHRQRILLQHLQPSSS-QTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
           MEKA+ RQ+ILL HL PSSS   ++S ++ AS C AG++A Y R   F DDVVIVAAYRT
Sbjct: 1   MEKAISRQKILLHHLNPSSSTHVNESSSLYASACVAGDSAAYQRTSTFRDDVVIVAAYRT 60

Query: 60  AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
           A CK KRGGFKDTL DDLLAPVLKAVIE+T +NPSEVGDIVVG+VLAPG+ RA ECRMAA
Sbjct: 61  AHCKGKRGGFKDTLPDDLLAPVLKAVIERTNVNPSEVGDIVVGSVLAPGAQRASECRMAA 120

Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
           FYAGFPETVP+RTVNRQCSSGLQAVADVA AI+AG YDIGI AGLESMT N +   G VN
Sbjct: 121 FYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMGWDGSVN 180

Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
           PKV++F QA++CLLPMGITSENVAQRFGV+R+EQD AAVESHRRAAAATASGKFKDEI+P
Sbjct: 181 PKVKMFEQAQNCLLPMGITSENVAQRFGVSRKEQDQAAVESHRRAAAATASGKFKDEIVP 240

Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
           V TKIVDPKTG EK VTISVDDGIRP TT++DL +LKP FKKDG+TTAGN+SQVSDGA A
Sbjct: 241 VTTKIVDPKTGEEKSVTISVDDGIRPGTTVSDLGRLKPVFKKDGSTTAGNSSQVSDGAAA 300

Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
           VLLMKRS+A+QKGLPILGVFR+F+AVGVDP++MG+GPA AIP AVK+AGL++DDI+LFEI
Sbjct: 301 VLLMKRSVALQKGLPILGVFRTFAAVGVDPAIMGVGPAAAIPVAVKAAGLELDDIDLFEI 360

Query: 360 NEVL 363
           NE  
Sbjct: 361 NEAF 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242039477|ref|XP_002467133.1| hypothetical protein SORBIDRAFT_01g020150 [Sorghum bicolor] gi|241920987|gb|EER94131.1| hypothetical protein SORBIDRAFT_01g020150 [Sorghum bicolor]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 287/364 (78%), Positives = 334/364 (91%), Gaps = 1/364 (0%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
           MEKA+ RQR+LL+HL P+++  S +P  ISAS C+AG++A YHR PAF DDVVIVAAYRT
Sbjct: 1   MEKAIDRQRVLLRHLSPAAAAESPAPPAISASACAAGDSAAYHRTPAFADDVVIVAAYRT 60

Query: 60  AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
           AICKAKRGGFKDT A+DLL PV KA+++KT+L+PSEVGDIVVGTVLAPGS RA+ECRMAA
Sbjct: 61  AICKAKRGGFKDTFAEDLLVPVFKALVDKTKLDPSEVGDIVVGTVLAPGSQRAIECRMAA 120

Query: 120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
            YAGFP+TVPL+TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN +S+ GQVN
Sbjct: 121 LYAGFPDTVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNKVSLDGQVN 180

Query: 180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIP 239
           PKVE+F+QARDCLLPMG+TSENVA RFG+TR EQD AAVESHR+AAAA A+GKFK+EI+P
Sbjct: 181 PKVELFSQARDCLLPMGLTSENVAHRFGITRLEQDQAAVESHRKAAAAAAAGKFKEEIVP 240

Query: 240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
           V+TKIVDPKTG EK++ +S DDGIRP+T++A L+KLKPAF KDGTTTAGNASQVSDGAGA
Sbjct: 241 VHTKIVDPKTGEEKKIVVSADDGIRPDTSLAVLSKLKPAFSKDGTTTAGNASQVSDGAGA 300

Query: 300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
           VLLM+R +A++KGLPILGVFR+F+AVGVDP+VMGIGPAVAIPAAVK+AGLQ+DDI+LFEI
Sbjct: 301 VLLMRRDVAMKKGLPILGVFRTFAAVGVDPAVMGIGPAVAIPAAVKAAGLQMDDIDLFEI 360

Query: 360 NEVL 363
           NE  
Sbjct: 361 NEAF 364

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223950105|gb|ACN29136.1| unknown [Zea mays] gi|413934107|gb|AFW68658.1| hypothetical protein ZEAMMB73_512974 [Zea mays]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/363 (78%), Positives = 333/363 (91%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKA+ RQR+LL+HL P+++ +   PAISAS C+AG++A YHR+PAF DDVVIVAAYRTA
Sbjct: 1   MEKAVDRQRVLLRHLNPAAAGSPAPPAISASACAAGDSAAYHRRPAFADDVVIVAAYRTA 60

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           ICKAKRGGFKDT A+DLL PV KA+++KT+L+PSEVGDIVVGTVLAPGS RA+ECRMAA 
Sbjct: 61  ICKAKRGGFKDTFAEDLLVPVFKALVDKTKLDPSEVGDIVVGTVLAPGSQRAIECRMAAL 120

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFP+TVPL+TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN +S+ GQ NP
Sbjct: 121 YAGFPDTVPLKTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNKVSLDGQANP 180

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
           KVE+F+QARDCLLPMG+TSENVA RFG+TR EQD AAVESHR+AAAA A+GKFK+EI+PV
Sbjct: 181 KVELFSQARDCLLPMGLTSENVAHRFGITRLEQDQAAVESHRKAAAAAAAGKFKEEIVPV 240

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
           +TKIVDPKTG EK++ IS DDGIR +T++A L+KLKPAF KDG+TTAGNASQVSDGAGAV
Sbjct: 241 HTKIVDPKTGEEKKIVISADDGIRVDTSLAVLSKLKPAFSKDGSTTAGNASQVSDGAGAV 300

Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
           LLM+R +A++KGLP+LGVFR+F+AVGVDP+VMGIGPAVAIPAAVK+AGLQ+DDI+LFEIN
Sbjct: 301 LLMRRDVAMKKGLPVLGVFRTFAAVGVDPAVMGIGPAVAIPAAVKAAGLQMDDIDLFEIN 360

Query: 361 EVL 363
           E  
Sbjct: 361 EAF 363

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
TAIR|locus:2046565	462	PKT3 "peroxisomal 3-ketoacyl-C	0.965	0.781	0.718	1.4e-133
TAIR|locus:2197778	443	PKT4 "peroxisomal 3-ketoacyl-C	0.946	0.799	0.695	8.7e-127
TAIR|locus:2156514	457	KAT5 "3-KETO-ACYL-COENZYME A T	0.957	0.783	0.650	2.3e-119
RGD|1562373	424	Acaa1b "acetyl-Coenzyme A acyl	0.895	0.790	0.536	1.2e-88
UNIPROTKB|F1RRB7	426	ACAA1 "Uncharacterized protein	0.887	0.779	0.530	2.5e-88
MGI|MGI:2148491	424	Acaa1a "acetyl-Coenzyme A acyl	0.893	0.787	0.534	5.3e-88
MGI|MGI:3605455	424	Acaa1b "acetyl-Coenzyme A acyl	0.895	0.790	0.536	1.4e-87
UNIPROTKB|F1NB64	425	ACAA1 "Uncharacterized protein	0.831	0.731	0.555	2.3e-87
UNIPROTKB|P09110	424	ACAA1 "3-ketoacyl-CoA thiolase	0.828	0.731	0.551	4.7e-87
RGD|67379	424	Acaa1a "acetyl-Coenzyme A acyl	0.895	0.790	0.527	6e-87

TAIR|locus:2046565 PKT3 "peroxisomal 3-ketoacyl-CoA thiolase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
 Identities = 260/362 (71%), Positives = 295/362 (81%)

Query:     1 MEKAXXXXXXXXXXXXPSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRT 59
             MEKA            PSSS + +  A +SAS C AG++A Y R   + DDVVIVAA+RT
Sbjct:     1 MEKAIERQRVLLEHLRPSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRT 60

Query:    60 AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA 119
              +CK+KRG FKDT  DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAA
Sbjct:    61 PLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAA 120

Query:   120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN 179
             FYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++  G VN
Sbjct:   121 FYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVN 180

Query:   180 PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIP 239
             P V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD                GKFKDEIIP
Sbjct:   181 PAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIP 240

Query:   240 VNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGA 299
             V TK+VDPKTG EK +T+SVDDGIRP TT+A L KLKP FKKDGTTTAGN+SQVSDGAGA
Sbjct:   241 VKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGA 300

Query:   300 VLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI 359
             VLLMKRS+A+QKGLP+LGVFR+F+AVGVDP++MGIGPAVAIPAAVK+AGL++DDI+LFEI
Sbjct:   301 VLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEI 360

Query:   360 NE 361
             NE
Sbjct:   361 NE 362

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0019395 "fatty acid oxidation" evidence=TAS

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=ISS;IMP;IDA

GO:0009611 "response to wounding" evidence=NAS

GO:0009695 "jasmonic acid biosynthetic process" evidence=NAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA;TAS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0043161 "proteasomal ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

GO:0010111 "glyoxysome organization" evidence=IMP

TAIR|locus:2197778 PKT4 "peroxisomal 3-ketoacyl-CoA thiolase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
 Identities = 251/361 (69%), Positives = 289/361 (80%)

Query:     1 MEKAXXXXXXXXXXXXPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
             MEKA            PSSS  SD+ ++SAS C + ++A Y     + DDVVIVAA RTA
Sbjct:     1 MEKATERQRILLRHLQPSSS--SDA-SLSASACLSKDSAAYQ----YGDDVVIVAAQRTA 53

Query:    61 ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
             +CKAKRG FKDT  D+LLA VL+A+IEKT +NPSEVGDIVVGTVL PGS RA ECRMAAF
Sbjct:    54 LCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAF 113

Query:   121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
             YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N     G VNP
Sbjct:   114 YAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVNP 173

Query:   181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPV 240
              V+ F QA +CLLPMGITSENVA RF V+R+EQD                GKFKDEI PV
Sbjct:   174 NVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITPV 233

Query:   241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
              TKIVDPKTG EK +T+SVDDGIRPNTT++ LAKLKP FK+DGTTTAGN+SQ+SDGAGAV
Sbjct:   234 KTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGAV 293

Query:   301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
             LLM+R++A+QKGLPILGVFR+FSAVGVDP++MG+GPAVAIPAAVK+AGL+++D++LFEIN
Sbjct:   294 LLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEIN 353

Query:   361 E 361
             E
Sbjct:   354 E 354

GO:0003824 "catalytic activity" evidence=IEA

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

TAIR|locus:2156514 KAT5 "3-KETO-ACYL-COENZYME A THIOLASE 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1175 (418.7 bits), Expect = 2.3e-119, P = 2.3e-119
 Identities = 238/366 (65%), Positives = 283/366 (77%)

Query:     1 MEKAXXXXXXXXXXXXPSSSQTSD---SPAISASICSAGEAAGYHRKPAFDDDVVIVAAY 57
             ME+A            P SS  S     P++ + +    E +      AF DD+VIVAAY
Sbjct:     1 MERAMERQKILLRHLNPVSSSNSSLKHEPSLLSPVNCVSEVSPM---AAFGDDIVIVAAY 57

Query:    58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM 117
             RTAICKA+RGGFKDTL DDLLA VLKAV+E+T L+PSEVGDIVVGTV+APGS RAMECR+
Sbjct:    58 RTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRV 117

Query:   118 AAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG- 176
             AA++AGFP++VP+RTVNRQCSSGLQAVADVA +I+AG YDIGI AG+ESM+ + I   G 
Sbjct:   118 AAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGGF 177

Query:   177 -QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKD 235
                NP+ + F +ARDCLLPMGITSENVA+RFGVTR+EQD+               GK KD
Sbjct:   178 HGSNPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDMAAVESHKRAAAAIASGKLKD 237

Query:   236 EIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSD 295
             EIIPV TKIVDP+T  EK + +SVDDG+RPN+ +ADLAKLK  FK++G+TTAGNASQ+SD
Sbjct:   238 EIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQISD 297

Query:   296 GAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN 355
             GAGAVLLMKRSLA++KGLPILGVFRSF+  GV+PSVMGIGPAVAIPAA K AGL + DI+
Sbjct:   298 GAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDID 357

Query:   356 LFEINE 361
             LFEINE
Sbjct:   358 LFEINE 363

GO:0003824 "catalytic activity" evidence=IEA

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0019395 "fatty acid oxidation" evidence=TAS

GO:0005777 "peroxisome" evidence=IDA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

RGD|1562373 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Rattus norvegicus (taxid:10116)]

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 184/343 (53%), Positives = 242/343 (70%)

Query:    19 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLL 78
             + ++  S A+ A+ CSAG    + +  A   DVV+V   RT I +A RGGFKDT  D+LL
Sbjct:    12 AGRSESSSALQAAPCSAG----FPQASA--SDVVVVHGRRTPIGRAGRGGFKDTTPDELL 65

Query:    79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS 138
             + VL AV++  +L P  +GDI VG VL PG+  AM  R+A F +G PETVPL  VNRQCS
Sbjct:    66 SAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAM-ARIAQFLSGIPETVPLSAVNRQCS 124

Query:   139 SGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198
             SGLQAVA++A  I+ G YDIG+A G+ESMT++     G ++ ++    +ARDCL+PMGIT
Sbjct:   125 SGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLLENEKARDCLIPMGIT 184

Query:   199 SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
             SENVA+RFG++RQ+QD                G F+ EI+PV T ++D K G  K +T+S
Sbjct:   185 SENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDK-GDRKTITVS 243

Query:   259 VDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV 318
              D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV
Sbjct:   244 QDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGV 303

Query:   319 FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
              RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINE
Sbjct:   304 LRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005777 "peroxisome" evidence=IDA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

UNIPROTKB|F1RRB7 ACAA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
 Identities = 181/341 (53%), Positives = 241/341 (70%)

Query:    22 TSD-SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAP 80
             TSD +PA  A  CS+          A  +D+V+V   RTAI ++ RGGFKDT  D+LL+ 
Sbjct:    16 TSDLAPAPQAEPCSSSHPL------ASAEDIVVVHGRRTAIGRSGRGGFKDTTPDELLSA 69

Query:    81 VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG 140
             V+ AV++  +L+P+++GDI VG VL PG+   M  R+A F +  PETVPL TVNRQCSSG
Sbjct:    70 VMTAVLQDVKLSPAQLGDICVGNVLQPGAGAVM-ARIAQFLSDIPETVPLSTVNRQCSSG 128

Query:   141 LQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE 200
             LQAVA++A  I+ G YDIG+A G+ESMT+      G ++ ++    +ARDCL+PMGITSE
Sbjct:   129 LQAVANIAGGIRNGSYDIGMACGVESMTLGDRGNPGNISSRLVEKEKARDCLIPMGITSE 188

Query:   201 NVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVD 260
             NVA+RFG++R++QD                G F+ EI+PV T + D K G EK +T++ D
Sbjct:   189 NVAKRFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVYDDK-GNEKSITVAQD 247

Query:   261 DGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320
             +GIRPNTT+  LAKLKPAFK+ G+TTAGN+SQVSDGA A+LL +RS A + GLPILG+ R
Sbjct:   248 EGIRPNTTMEGLAKLKPAFKQGGSTTAGNSSQVSDGAAALLLARRSKAKELGLPILGILR 307

Query:   321 SFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
             S++ VGV P +MGIGPA AIP A++ AGL +DDI++FEINE
Sbjct:   308 SYAVVGVPPDIMGIGPAYAIPVALEKAGLTVDDIDIFEINE 348

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

MGI|MGI:2148491 Acaa1a "acetyl-Coenzyme A acyltransferase 1A" [Mus musculus (taxid:10090)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 184/344 (53%), Positives = 242/344 (70%)

Query:    19 SSQTSDSPAISASICSAGEAAGYHRKP-AFDDDVVIVAAYRTAICKAKRGGFKDTLADDL 77
             + +   S A+ A+ CSA       R P A   DVV+V   RT I +A RGGFK+T  D+L
Sbjct:    12 AGRPESSSALQAAPCSA-------RFPQASASDVVVVHGRRTPIGRASRGGFKNTTPDEL 64

Query:    78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC 137
             L+ VL AV++  RL P ++GDI VG VL PG+   M  R+A F +G PETVPL TVNRQC
Sbjct:    65 LSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVM-ARIAQFLSGIPETVPLSTVNRQC 123

Query:   138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGI 197
             SSGLQAVA++A  I+ G YDIG+A G+ESM+++ +   G ++ ++    +ARDCL PMG+
Sbjct:   124 SSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSRLLESEKARDCLTPMGM 183

Query:   198 TSENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTI 257
             TSENVA+RFG++RQ+QD                G F+ EI+PV T ++D K G +K +T+
Sbjct:   184 TSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTTVLDDK-GDKKTITV 242

Query:   258 SVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILG 317
             S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILG
Sbjct:   243 SQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILG 302

Query:   318 VFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
             V RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINE
Sbjct:   303 VLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISO

GO:0003824 "catalytic activity" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=TAS

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO;IDA;TAS

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=ISO

GO:0007584 "response to nutrient" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0008206 "bile acid metabolic process" evidence=ISO

GO:0016401 "palmitoyl-CoA oxidase activity" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0048545 "response to steroid hormone stimulus" evidence=ISO

MGI|MGI:3605455 Acaa1b "acetyl-Coenzyme A acyltransferase 1B" [Mus musculus (taxid:10090)]

 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 184/343 (53%), Positives = 241/343 (70%)

Query:    19 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLL 78
             + +   S A+ A+ CSAG    + +  A   DVV+V   RT I +A RG FKDT  D+LL
Sbjct:    12 AGRPESSSALQAAPCSAG----FLQASA--SDVVVVHGRRTPIGRASRGCFKDTTPDELL 65

Query:    79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS 138
             + VL AV++  +L P ++GDI VG VL PG+   M  R+A F +G PETVPL TVNRQCS
Sbjct:    66 SAVLTAVLQDVKLKPEQLGDISVGNVLQPGAGAIM-ARIAQFLSGIPETVPLSTVNRQCS 124

Query:   139 SGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198
             SGLQAVA++A  I+ G YDIG+A G+ESMT++     G ++ ++    +ARDCL+PMGIT
Sbjct:   125 SGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSRLLENEKARDCLIPMGIT 184

Query:   199 SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
             SENVA+RFGV+RQ+QD                G F  EI+PV T +++ K G +K +T+S
Sbjct:   185 SENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVTTTVLNDK-GDKKTITVS 243

Query:   259 VDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV 318
              D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV
Sbjct:   244 QDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGV 303

Query:   319 FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
              RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINE
Sbjct:   304 LRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346

GO:0003824 "catalytic activity" evidence=IEA

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

UNIPROTKB|F1NB64 ACAA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
 Identities = 174/313 (55%), Positives = 232/313 (74%)

Query:    49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
             +DVV+V   RTAI +AKRGGFKDT  D+LL+ V+ AV++  RL P  +GDI VG VL PG
Sbjct:    37 EDVVVVHGRRTAIGRAKRGGFKDTTPDELLSAVMTAVLQDVRLRPEVLGDICVGNVLQPG 96

Query:   109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
             +  A+  R+A F +G PETVP  +VNRQCSSGLQA+ ++A  I+ G YDIG+A G+E+M+
Sbjct:    97 AG-ALIARVAQFLSGIPETVPCSSVNRQCSSGLQAIINIAGGIRNGSYDIGMACGVETMS 155

Query:   169 VNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXX 228
             + S +  G ++  +   ++ARDCL+PMGITSENVA++FG++R++QD              
Sbjct:   156 LRSGNNPGDISSSMMENSKARDCLIPMGITSENVAEKFGISRKKQDAFALASQQKAAKAQ 215

Query:   229 XXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAG 288
               G FK EI+PV T ++D + G +K +T+  D+G+RP+TT+  LAKLKPAFK++G+TTAG
Sbjct:   216 QMGLFKAEIVPVKTTVLDNE-GNQKTITVHQDEGVRPSTTLEGLAKLKPAFKENGSTTAG 274

Query:   289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAG 348
             NASQVSDGA AVLL KRS A+Q GLPILGV RSF+ VGV P VMGIGPA AIP AV+ AG
Sbjct:   275 NASQVSDGAAAVLLAKRSKAMQLGLPILGVLRSFAVVGVPPDVMGIGPAYAIPVAVQKAG 334

Query:   349 LQIDDINLFEINE 361
             L ++DI+++EINE
Sbjct:   335 LTLNDIDIYEINE 347

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0006635 "fatty acid beta-oxidation" evidence=IEA

GO:0008206 "bile acid metabolic process" evidence=IEA

GO:0016401 "palmitoyl-CoA oxidase activity" evidence=IEA

UNIPROTKB|P09110 ACAA1 "3-ketoacyl-CoA thiolase, peroxisomal" [Homo sapiens (taxid:9606)]

 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 172/312 (55%), Positives = 225/312 (72%)

Query:    50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
             DVV+V   RTAIC+A RGGFKDT  D+LL+ V+ AV++   L P ++GDI VG VL PG+
Sbjct:    37 DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA 96

Query:   110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
                M  R+A F +  PETVPL TVNRQCSSGLQAVA +A  I+ G YDIG+A G+ESM++
Sbjct:    97 GAIM-ARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 155

Query:   170 NSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXX 229
                   G +  ++    +ARDCL+PMGITSENVA+RFG++R++QD               
Sbjct:   156 ADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQS 215

Query:   230 XGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGN 289
              G F+ EI+PV T + D K G ++ +T++ D+GIRP+TT+  LAKLKPAFKKDG+TTAGN
Sbjct:   216 KGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGN 274

Query:   290 ASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGL 349
             +SQVSDGA A+LL +RS A + GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL
Sbjct:   275 SSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGL 334

Query:   350 QIDDINLFEINE 361
              + D+++FEINE
Sbjct:   335 TVSDVDIFEINE 346

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0008206 "bile acid metabolic process" evidence=IMP

GO:0000038 "very long-chain fatty acid metabolic process" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0006635 "fatty acid beta-oxidation" evidence=IMP

GO:0016401 "palmitoyl-CoA oxidase activity" evidence=IMP

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0033540 "fatty acid beta-oxidation using acyl-CoA oxidase" evidence=TAS

GO:0033559 "unsaturated fatty acid metabolic process" evidence=TAS

GO:0036109 "alpha-linolenic acid metabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

RGD|67379 Acaa1a "acetyl-Coenzyme A acyltransferase 1A" [Rattus norvegicus (taxid:10116)]

 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 181/343 (52%), Positives = 240/343 (69%)

Query:    19 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLL 78
             + +   S A+ A+ CSA     + +  A   DVV+V   RT I +A RGGFKDT  D+LL
Sbjct:    12 AGRPESSSALQAAPCSAT----FPQASA--SDVVVVHGRRTPIGRAGRGGFKDTTPDELL 65

Query:    79 APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS 138
             + VL AV++  +L P  +GDI VG VL PG+   M  R+A F +G PETVPL  VNRQCS
Sbjct:    66 SAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVM-ARIAQFLSGIPETVPLSAVNRQCS 124

Query:   139 SGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198
             SGLQAVA++A  I+ G YDIG+A G+ESM++++    G ++ ++    +ARDCL+PMGIT
Sbjct:   125 SGLQAVANIAGGIRNGSYDIGMACGVESMSLSNRGNPGNISSRLLESDKARDCLIPMGIT 184

Query:   199 SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
             SENVA+RFG++RQ+QD                G F+ EI+PV T ++D K G  K +T+S
Sbjct:   185 SENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDK-GDRKTITVS 243

Query:   259 VDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV 318
              D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV
Sbjct:   244 QDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGV 303

Query:   319 FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
              RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINE
Sbjct:   304 LRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINE 346

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISO

GO:0003988 "acetyl-CoA C-acyltransferase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0006635 "fatty acid beta-oxidation" evidence=ISO;IGI

GO:0007584 "response to nutrient" evidence=IDA

GO:0008206 "bile acid metabolic process" evidence=ISO

GO:0016401 "palmitoyl-CoA oxidase activity" evidence=ISO;IGI

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0042493 "response to drug" evidence=IEP

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0048545 "response to steroid hormone stimulus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P09110	THIK_HUMAN	2, ., 3, ., 1, ., 1, 6	0.5125	0.9304	0.8207	yes	no
Q8VCH0	THIKB_MOUSE	2, ., 3, ., 1, ., 1, 6	0.5403	0.9304	0.8207	yes	no
Q8LF48	THIK1_ARATH	2, ., 3, ., 1, ., 1, 6	0.7438	0.9518	0.8036	no	no
Q05493	THIK_YARLI	2, ., 3, ., 1, ., 1, 6	0.5235	0.8288	0.7487	yes	no
Q921H8	THIKA_MOUSE	2, ., 3, ., 1, ., 1, 6	0.5388	0.9278	0.8183	yes	no
P07871	THIKB_RAT	2, ., 3, ., 1, ., 1, 6	0.5403	0.9304	0.8207	yes	no
Q56WD9	THIK2_ARATH	2, ., 3, ., 1, ., 1, 6	0.7664	0.9705	0.7857	yes	no
P21775	THIKA_RAT	2, ., 3, ., 1, ., 1, 6	0.5320	0.9304	0.8207	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	0.976
3rd Layer	2.3.1.16	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00020472001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (461 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00038876001	SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (448 aa)	•			•		•	•		0.955
	GSVIVG00018681001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (691 aa)				•		•	•		0.924
	GSVIVG00027718001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (296 aa)	•		•			•	•		0.924
	GSVIVG00023263001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (304 aa)	•					•	•		0.916
	GSVIVG00029076001	SubName- Full=Chromosome chr12 scaffold_47, whole genome shotgun sequence; (381 aa)	•		•	•		•	•	•	0.912
	GSVIVG00017259001	SubName- Full=Chromosome chr6 scaffold_15, whole genome shotgun sequence; (432 aa)						•	•		0.908
	GSVIVG00033040001	SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (428 aa)	•					•			0.906
	GSVIVG00032013001	SubName- Full=Chromosome chr18 scaffold_61, whole genome shotgun sequence; (82 aa)			•			•		•	0.905
	GSVIVG00005784001	SubName- Full=Chromosome chr3 scaffold_158, whole genome shotgun sequence; (539 aa)						•	•		0.900
	GSVIVG00017784001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (111 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	374
PLN02287	452	PLN02287, PLN02287, 3-ketoacyl-CoA thiolase	0.0
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	1e-130
TIGR01930	386	TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans	1e-118
PRK05790	393	PRK05790, PRK05790, putative acyltransferase; Prov	1e-103
PRK07661	391	PRK07661, PRK07661, acetyl-CoA acetyltransferase;	4e-96
PRK09052	399	PRK09052, PRK09052, acetyl-CoA acetyltransferase;	7e-96
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	1e-94
PRK07108	392	PRK07108, PRK07108, acetyl-CoA acetyltransferase;	3e-82
PRK09051	394	PRK09051, PRK09051, beta-ketothiolase; Provisional	2e-81
PRK08947	387	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed	6e-79
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	3e-75
PRK06445	394	PRK06445, PRK06445, acetyl-CoA acetyltransferase;	1e-70
PRK06205	404	PRK06205, PRK06205, acetyl-CoA acetyltransferase;	6e-69
PRK05656	393	PRK05656, PRK05656, acetyl-CoA acetyltransferase;	8e-69
TIGR02445	385	TIGR02445, fadA, fatty oxidation complex, beta sub	6e-67
TIGR02430	400	TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase	8e-63
PRK09050	401	PRK09050, PRK09050, beta-ketoadipyl CoA thiolase;	3e-62
PRK07851	406	PRK07851, PRK07851, acetyl-CoA acetyltransferase;	7e-62
PRK08235	393	PRK08235, PRK08235, acetyl-CoA acetyltransferase;	1e-59
PLN02644	394	PLN02644, PLN02644, acetyl-CoA C-acetyltransferase	1e-59
PRK08963	428	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed	4e-57
PRK06633	392	PRK06633, PRK06633, acetyl-CoA acetyltransferase;	3e-55
PRK13359	400	PRK13359, PRK13359, beta-ketoadipyl CoA thiolase;	4e-54
PRK08131	401	PRK08131, PRK08131, acetyl-CoA acetyltransferase;	2e-53
PRK07801	382	PRK07801, PRK07801, acetyl-CoA acetyltransferase;	2e-52
PRK08242	402	PRK08242, PRK08242, acetyl-CoA acetyltransferase;	2e-52
PRK07850	387	PRK07850, PRK07850, acetyl-CoA acetyltransferase;	1e-51
PRK06504	390	PRK06504, PRK06504, acetyl-CoA acetyltransferase;	1e-51
PRK06690	361	PRK06690, PRK06690, acetyl-CoA acetyltransferase;	1e-50
PRK08170	426	PRK08170, PRK08170, acetyl-CoA acetyltransferase;	3e-50
PRK06954	397	PRK06954, PRK06954, acetyl-CoA acetyltransferase;	9e-46
PRK06366	388	PRK06366, PRK06366, acetyl-CoA acetyltransferase;	4e-45
TIGR02446	430	TIGR02446, FadI, fatty oxidation complex, beta sub	7e-42
PRK06025	417	PRK06025, PRK06025, acetyl-CoA acetyltransferase;	2e-39
PRK09268	427	PRK09268, PRK09268, acetyl-CoA acetyltransferase;	1e-38
cd00826	393	cd00826, nondecarbox_cond_enzymes, nondecarboxylat	2e-31
pfam02803	123	pfam02803, Thiolase_C, Thiolase, C-terminal domain	2e-16
cd00829	375	cd00829, SCP-x_thiolase, Thiolase domain associate	5e-09
PRK12578	385	PRK12578, PRK12578, acetyl-CoA acetyltransferase;	1e-06
PRK06064	389	PRK06064, PRK06064, acetyl-CoA acetyltransferase;	3e-05
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	3e-04
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	7e-04

>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase

 Score =  654 bits (1690), Expect = 0.0
 Identities = 295/361 (81%), Positives = 331/361 (91%), Gaps = 3/361 (0%)

Query: 1   MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTA 60
           MEKA++RQR+LL+HL+PSSS   +  ++SAS C+AG++A YHR  AF DDVVIVAAYRT 
Sbjct: 1   MEKAINRQRVLLRHLRPSSS---EPSSLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTP 57

Query: 61  ICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAF 120
           ICKAKRGGFKDT  DDLLAPVLKAV+EKT LNPSEVGDIVVGTVLAPGS RA ECRMAAF
Sbjct: 58  ICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAF 117

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNP 180
           YAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AG+ESMT N ++  G VNP
Sbjct: 118 YAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNP 177

Query: 181 KVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV 240
           +VE F+QA+DCLLPMGITSENVA+RFGVTR+EQD AAVESHR+AAAATASGKFKDEI+PV
Sbjct: 178 RVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPV 237

Query: 241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAV 300
           +TKIVDPKTG EK + ISVDDGIRPNTT+ADLAKLKP FKK+GTTTAGN+SQVSDGAGAV
Sbjct: 238 HTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAV 297

Query: 301 LLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN 360
           LLMKRS+A+QKGLPILGVFRSF+AVGVDP+VMGIGPAVAIPAAVK+AGL++DDI+LFEIN
Sbjct: 298 LLMKRSVAMQKGLPILGVFRSFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEIN 357

Query: 361 E 361
           E
Sbjct: 358 E 358

Length = 452

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score =  377 bits (970), Expect = e-130
 Identities = 153/320 (47%), Positives = 203/320 (63%), Gaps = 18/320 (5%)

Query: 52  VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
           VIV+A RT I +   G  KD  ADDL A V+KA++E+  L+P EV D+++G VL  G  +
Sbjct: 1   VIVSAVRTPIGRFG-GALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQ 59

Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
               R AA  AG PE+VP  TVNR C SGLQAVA  A +I AG  D+ +A G+ESM+   
Sbjct: 60  NP-ARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAP 118

Query: 172 ISV----------VGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESH 221
             +          +  ++  ++         L MGIT+ENVA+++G++R+EQD  A+ SH
Sbjct: 119 YLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178

Query: 222 RRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
           +RAAAA  +G+FKDEI+PV         G +  V +  D+G RP+TT+  LAKLKPAFKK
Sbjct: 179 QRAAAAQEAGRFKDEIVPVEVP------GRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKK 232

Query: 282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIP 341
           DGT TAGNAS ++DGA AVLLM    A + GL  L     ++  GVDP++MGIGP  AIP
Sbjct: 233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIP 292

Query: 342 AAVKSAGLQIDDINLFEINE 361
            A+K AGL +DDI+L EINE
Sbjct: 293 KALKRAGLTLDDIDLIEINE 312

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases

 Score =  348 bits (896), Expect = e-118
 Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 20/321 (6%)

Query: 53  IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA 112
           IVAA RT I K   G  KD  A+DL A V+K ++E+  L+P  + D++ G VL  G    
Sbjct: 1   IVAAARTPIGKFG-GSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQ-Q 58

Query: 113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI 172
              R AA  AG PE+VP  TVNRQC+SGLQAV   A  I+AG  D+ +A G+ESM+    
Sbjct: 59  NIARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPY 118

Query: 173 SV----VGQVNPKVEIFTQARDCL--------LPMGITSENVAQRFGVTRQEQDLAAVES 220
           SV       V P                    L MG+T+EN+A+++G++R+EQD  A+ S
Sbjct: 119 SVPRSRRWGVKPGNAELEDQILKDGLDDPLNGLSMGLTAENLAKKYGISREEQDEYALRS 178

Query: 221 HRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
           H+RAA A   G FKDEI+PV   +   K  V     +S D+GIRPNTT+  LAKLKPAF 
Sbjct: 179 HQRAAKAWEEGLFKDEIVPV--SVKGRKGPV----VVSSDEGIRPNTTLEKLAKLKPAFD 232

Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
            +GT TAGN+S ++DGA A+LLM    A + GL  L    S++  GVDP +MG+GP  AI
Sbjct: 233 PNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDPEIMGLGPVPAI 292

Query: 341 PAAVKSAGLQIDDINLFEINE 361
           P A+K AGL I DI+LFEINE
Sbjct: 293 PKALKKAGLSISDIDLFEINE 313

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386

>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional

 Score =  309 bits (795), Expect = e-103
 Identities = 145/324 (44%), Positives = 197/324 (60%), Gaps = 18/324 (5%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
            DVVIV+A RT I K   G  KD  A +L A V+KA +E+  + P +V ++++G VL  G
Sbjct: 2   KDVVIVSAARTPIGKFG-GALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAG 60

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
           + +    R AA  AG P  VP  T+N+ C SGL+AVA  A AI+AG  DI +A G ESM+
Sbjct: 61  AGQ-NPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMS 119

Query: 169 ----VNSISVVGQVNPKVEIF-TQARDCL------LPMGITSENVAQRFGVTRQEQDLAA 217
               V   S  GQ    VE+  T   D L        MGIT+EN+A+++G+TR+EQD  A
Sbjct: 120 QAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFA 179

Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
           + S ++A AA  +G+FKDEI+PV  K           V +  D+  RP+TT   LAKL+P
Sbjct: 180 LASQQKAEAAIKAGRFKDEIVPVTIK-----QRKGDPVVVDTDEHPRPDTTAESLAKLRP 234

Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
           AF KDGT TAGNAS ++DGA AV++M  + A + GL  L    S++  GVDP++MGIGP 
Sbjct: 235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPV 294

Query: 338 VAIPAAVKSAGLQIDDINLFEINE 361
            AI  A++ AG  + D++L EINE
Sbjct: 295 PAIRKALEKAGWSLADLDLIEINE 318

Length = 393

>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional

 Score =  291 bits (746), Expect = 4e-96
 Identities = 140/315 (44%), Positives = 193/315 (61%), Gaps = 8/315 (2%)

Query: 52  VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
           VIVA  RT + KAK+G  K    DDL A V+K  +++       + D+++G  + P + +
Sbjct: 5   VIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAM-PEAEQ 63

Query: 112 AME-CRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
            +   R     AG P TVP  T+NR CSSGLQ++A  A  I  G  +  IA G ESM++ 
Sbjct: 64  GLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSL- 122

Query: 171 SISVVGQV-NPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATA 229
            + ++G V  P   +   A +  + MG T+E VA ++G++R++QD  AV SH+RAA A A
Sbjct: 123 -VPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALA 181

Query: 230 SGKFKDEIIPVN---TKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTT 286
            GKF DEI+PV+     + +     E+ +T S D+G+R +TT+  L KL+PAF   G+ T
Sbjct: 182 EGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVT 241

Query: 287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKS 346
           AGN+SQ+SDGA AVLLM R  A   GL  L  FRSF+  GV P VMGIGP  AIP A+K 
Sbjct: 242 AGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKL 301

Query: 347 AGLQIDDINLFEINE 361
           AGL++ DI LFE+NE
Sbjct: 302 AGLELSDIGLFELNE 316

Length = 391

>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional

 Score =  291 bits (746), Expect = 7e-96
 Identities = 143/324 (44%), Positives = 198/324 (61%), Gaps = 18/324 (5%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPG 108
           D  IVAA RT + KA RG FK+T  DDLLA VL++ + +   L+P  + D +VG  +   
Sbjct: 7   DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  R+ A  AG P +V   TVNR C+SGLQAVA  A  I+ G  D+ IAAG+ESM+
Sbjct: 67  EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMS 126

Query: 169 V-----NSISVVGQVNPKVEIFTQARDCLLP--MGITSENVAQRFGVTRQEQDLAAVESH 221
           +     N  S+    +P   IF +  +  +   MG+T+E VA+++ V+R++QD  A+ESH
Sbjct: 127 MVPMMGNKPSM----SP--AIFARDENVGIAYGMGLTAEKVAEQWKVSREDQDAFALESH 180

Query: 222 RRAAAATASGKFKDEIIP--VNTKIVDPKTG--VEKRVTISVDDGIRPNTTIADLAKLKP 277
           ++A AA  +G+FKDEI P  +  +  D  TG    K  T+ +D+G R +T++  LAKLKP
Sbjct: 181 QKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240

Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
            F   G+ TAGN+SQ SDGAGAV+L+      Q  L  L  F SF+  GV P +MGIGP 
Sbjct: 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPI 300

Query: 338 VAIPAAVKSAGLQIDDINLFEINE 361
            AIPAA+K AGL+ DD++  E+NE
Sbjct: 301 EAIPAALKQAGLKQDDLDWIELNE 324

Length = 399

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score =  282 bits (724), Expect = 1e-94
 Identities = 121/269 (44%), Positives = 167/269 (62%), Gaps = 19/269 (7%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           DVVIV+A RT I  +  G  KD  A DL A  +KA +E+  + P +V ++++G VL  G 
Sbjct: 1   DVVIVSAARTPI-GSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGE 59

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT- 168
                 R AA  AG P++VP  T+N+ C SGL+AVA  A AI+AG  DI +A G+ESM+ 
Sbjct: 60  G-QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSN 118

Query: 169 ----VNSISVVGQVNPKVEIFTQARD------CLLPMGITSENVAQRFGVTRQEQDLAAV 218
               + +  V  ++     + T  +D       L+ MGIT+ENVA+++G++R+EQD  A+
Sbjct: 119 APYVLPASRVGARMGDAKLVDTMLKDGLTDAFNLIHMGITAENVAKKYGISREEQDEFAL 178

Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
            S ++AAAA  +GKFKDEI+PV  K         K + +  D+GIRP TT+  LAKLKPA
Sbjct: 179 RSQQKAAAAQKAGKFKDEIVPVTIKGRK-----GKPLVVDKDEGIRPGTTLESLAKLKPA 233

Query: 279 FKKD-GTTTAGNASQVSDGAGAVLLMKRS 306
           F K+ GT TAGNAS ++DGA AVLLM  S
Sbjct: 234 FDKENGTVTAGNASGLNDGAAAVLLMSES 262

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional

 Score =  255 bits (654), Expect = 3e-82
 Identities = 139/328 (42%), Positives = 196/328 (59%), Gaps = 29/328 (8%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           + VIV+  RT + K+ RG F  T    L   V++  +E+ +L+P+EV D+++G     G+
Sbjct: 3   EAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGA 62

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
           T A   R  A  AG P TVP  TVNR CSSGLQ +A  A  + AG  D+ +A G+ES   
Sbjct: 63  TGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVES--- 119

Query: 170 NSISVVGQ------------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAA 217
             IS V              V  K EI+         M  T+ENVA+R+G++++ QD   
Sbjct: 120 --ISCVQNEMNRHMLREGWLVEHKPEIY-------WSMLQTAENVAKRYGISKERQDEYG 170

Query: 218 VESHRRAAAATASGKFKDEIIP--VNTKIVDPKTG--VEKRVTISVDDGIRPNTTIADLA 273
           V+S +RAAAA A+G+F DEI+P  V   + D  TG    K VT+S D+GIRP+TT+  ++
Sbjct: 171 VQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVS 230

Query: 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG 333
           K++ A    G  TAGNASQ SDGA A ++M   +A ++GL  LG+FR F+  G +P  MG
Sbjct: 231 KIRSALP-GGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMG 289

Query: 334 IGPAVAIPAAVKSAGLQIDDINLFEINE 361
           IGP  A+P  +K AGL++DDI+L+E+NE
Sbjct: 290 IGPVFAVPKLLKQAGLKVDDIDLWELNE 317

Length = 392

>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional

 Score =  254 bits (650), Expect = 2e-81
 Identities = 130/327 (39%), Positives = 182/327 (55%), Gaps = 26/327 (7%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKTRLNPSEVGDIVVGTVL 105
           +VV+V+  RTAI     G F  +L D    DL A V++  + +  ++P +VG +V G V+
Sbjct: 4   EVVVVSGVRTAI-----GTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVI 58

Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
                     R+AA  AG P+  P   VNR C SGLQA+   A AI  G  D+ I  G E
Sbjct: 59  PTEPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAE 118

Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLL----------PMGITSENVAQRFGVTRQEQDL 215
           SM+     +            +  D ++           MG+T+ENVA ++G++R+ QD 
Sbjct: 119 SMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVAAKYGISREAQDA 178

Query: 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275
            A+ESHRRAAAA A+G FKD+I+PV  K    + G    V    D+ +R +TT+ DLAKL
Sbjct: 179 LALESHRRAAAAIAAGYFKDQIVPVEIKT---RKGE---VVFDTDEHVRADTTLEDLAKL 232

Query: 276 KPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI 334
           KP FKK+ GT TAGNAS ++DGA AV+L +   A  +GL  L     ++  GVDP  MGI
Sbjct: 233 KPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGI 292

Query: 335 GPAVAIPAAVKSAGLQIDDINLFEINE 361
           GP  A   A++ AGL + D+++ E NE
Sbjct: 293 GPVPATQKALERAGLTVADLDVIEANE 319

Length = 394

>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed

 Score =  247 bits (632), Expect = 6e-79
 Identities = 130/317 (41%), Positives = 183/317 (57%), Gaps = 15/317 (4%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTV---L 105
           DVVIV A RT + ++K G F++  A+DL A ++++++ +   L+P+E+ DI+ G V   L
Sbjct: 3   DVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTL 62

Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
             G   A   R AA  AG P +VP  TVNR C S +QA+ D A AI  G  D+ +  G+E
Sbjct: 63  EQGFNIA---RNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVE 119

Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAA 225
            M    + +   V+    +          MG+T+E + +  G++R++QD  A  SH+RA 
Sbjct: 120 HM--GHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHQRAW 177

Query: 226 AATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGT 284
           AAT  G+FK+EIIP      D   GV K      D+ IRP TT+  LA L+PAF   +GT
Sbjct: 178 AATQEGRFKNEIIPTEGHDAD---GVLKLFDY--DEVIRPETTVEALAALRPAFDPVNGT 232

Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
            TAG +S +SDGA A+L+M  S A + GL      RS +  G DPS+MG GP  A   A+
Sbjct: 233 VTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKAL 292

Query: 345 KSAGLQIDDINLFEINE 361
           K AGL I DI++FE+NE
Sbjct: 293 KRAGLSISDIDVFELNE 309

Length = 387

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score =  237 bits (607), Expect = 3e-75
 Identities = 121/326 (37%), Positives = 172/326 (52%), Gaps = 24/326 (7%)

Query: 48  DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR--LNPSEVGDIVVGTVL 105
             DV IV A RT   K   G   +  A+ L A ++ A +E+    ++ ++V D+++G VL
Sbjct: 1   MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60

Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
             G       R AA  AG P +VP  TVNR C+SGL AV   A AI +G  D+ +A G+E
Sbjct: 61  QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVE 120

Query: 166 SMTVNSISVVGQ------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVE 219
            M+   +   G       V+P  E           MG+T+E  A+R+G++R++QD  AV+
Sbjct: 121 KMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAERYAKRYGISREDQDEVAVK 180

Query: 220 SHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPN--TTIADLAKLKP 277
           SH+ AAA   +G F DEI P +         V     +  D   R +   T    A L P
Sbjct: 181 SHKNAAANPKAGFF-DEITPED---------VLNSP-VVADPLRRLDCSPTSDGAAALVP 229

Query: 278 AFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGP 336
           AF++  GT TAGNAS ++DGA A+LLM  S A + GL  L   R+++  GVDPS+M  GP
Sbjct: 230 AFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGP 288

Query: 337 AVAIPAAVKSAGLQ-IDDINLFEINE 361
             A+  A+  AGL  ++D+ L E  E
Sbjct: 289 VAAVHDALTIAGLLALEDLGLAEKGE 314

Length = 392

>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional

 Score =  225 bits (576), Expect = 1e-70
 Identities = 117/324 (36%), Positives = 174/324 (53%), Gaps = 17/324 (5%)

Query: 49  DDVVIVAAYRTAICKAK-----RGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGT 103
           +DV +V   RTA  + +     +  F +   ++L A ++  +IEKT + P E+ DI+ G 
Sbjct: 2   EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61

Query: 104 VLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163
            L  G       R   F A  P  +P   V+RQC+S L  V+  A  I  G+ DI IA G
Sbjct: 62  ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121

Query: 164 LESMTVNSISVVGQVNPKVEIFTQAR------DCLLPMGITSENVAQRFGVTRQEQDLAA 217
           +E MT   +     + P  ++ T  +           MG+T+E +A+  G+ R+E D  +
Sbjct: 122 VEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWS 181

Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
           + SH+ AA A   G FKDEI+P+  ++        K+  + VD  +RP+T++  LAKL P
Sbjct: 182 LRSHQLAAKAIQEGYFKDEILPIEVEVEG------KKKVVDVDQSVRPDTSLEKLAKLPP 235

Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
           AFK DG  TAGN+S ++ GA  VLLM +    + GL  +   RSF   GV P++MG GP 
Sbjct: 236 AFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPV 295

Query: 338 VAIPAAVKSAGLQIDDINLFEINE 361
            A   A++ AGL + DI+L+EINE
Sbjct: 296 PASKKALEKAGLSVKDIDLWEINE 319

Length = 394

>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional

 Score =  221 bits (566), Expect = 6e-69
 Identities = 126/344 (36%), Positives = 181/344 (52%), Gaps = 53/344 (15%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           D VI    RT + +   G FKD  A++L A V++A++E+T ++P+ + D++ G     G 
Sbjct: 3   DAVICEPVRTPVGRFG-GAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE 61

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
             A+  R+AA  AG P TVP   ++R+C SGLQAV   A  ++ G  D+ IA G ESM+ 
Sbjct: 62  APAIG-RVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMS- 119

Query: 170 NSISVVGQVNPKVEIFT------------QARDCL-------------LPMGI--TSENV 202
                       VE +T            Q  D L             +P G+  T+EN+
Sbjct: 120 -----------NVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIETAENL 168

Query: 203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVN--TKIVDPKTGVEKRVTISVD 260
            + +G++R+EQD  AV SH+RA AA  +G+F DEI+PV    +  DP         +  D
Sbjct: 169 RREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDP-------TVVDRD 221

Query: 261 DGIRPNTTIADLAKLKP---AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILG 317
           +  R +TT+  LAKL+P       + T TAGNAS  +D A A L+     A + GL  L 
Sbjct: 222 EHPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLA 281

Query: 318 VFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
              S++  GV+PS MGIGP  A   A+  AGL +DDI+L E+NE
Sbjct: 282 RLVSWAVAGVEPSRMGIGPVPATEKALARAGLTLDDIDLIELNE 325

Length = 404

>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional

 Score =  221 bits (564), Expect = 8e-69
 Identities = 127/327 (38%), Positives = 194/327 (59%), Gaps = 26/327 (7%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKTRLNPSEVGDIVVGTVL 105
           DVVIVAA RTAI     G F+ +LA+    +L A V++ ++E+T L+P++V ++++G VL
Sbjct: 3   DVVIVAATRTAI-----GSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVL 57

Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
             G+ +    R AA  AG P +VP  T+N+ C SGL+A+   A AI+ G  ++ IA G E
Sbjct: 58  TAGAGQN-PARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQE 116

Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLLP-----------MGITSENVAQRFGVTRQEQD 214
           +M++    + G          Q  D ++            MGIT+EN+ +++G++R+ QD
Sbjct: 117 NMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQD 176

Query: 215 LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274
             A  S ++A AA  +G+F DEI P+   ++  + G  + +  + D+  R  TT   LAK
Sbjct: 177 AFAAASQQKAVAAIEAGRFDDEITPI---LIPQRKG--EPLAFATDEQPRAGTTAESLAK 231

Query: 275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI 334
           LKPAFKKDG+ TAGNAS ++DGA AVLLM  + A   GLP+L    +++  GVDP++MGI
Sbjct: 232 LKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGI 291

Query: 335 GPAVAIPAAVKSAGLQIDDINLFEINE 361
           GP  A    +  AG  + +++L E NE
Sbjct: 292 GPVSATRRCLDKAGWSLAELDLIEANE 318

Length = 393

>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA

 Score =  216 bits (551), Expect = 6e-67
 Identities = 128/317 (40%), Positives = 177/317 (55%), Gaps = 15/317 (4%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTV---L 105
           DVVIV   RT + ++K G F++T A+DL A ++  ++ +  +++P+EV DI  G V   L
Sbjct: 1   DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60

Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
             G   A   R AA  A  P T    TVNR C S +QA+ D A AI  G  D+ +  G+E
Sbjct: 61  EQGFNIA---RNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVE 117

Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAA 225
            M    + ++  V+    +          MG+T+E + +  G++R++QD  A  SH RA 
Sbjct: 118 HM--GHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQDAFAARSHARAH 175

Query: 226 AATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGT 284
           AAT  GKFK+EIIP      D   G  K      D+ IRP TT+  LA L+PAF  K+GT
Sbjct: 176 AATQEGKFKNEIIPTQGHDAD---GFLK--QFDYDEVIRPETTVESLAALRPAFDPKNGT 230

Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
            TAG +S +SDGA A+L+M    A + GL      RS +  G DPS+MG GP  A   A+
Sbjct: 231 VTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKAL 290

Query: 345 KSAGLQIDDINLFEINE 361
           K AGL I DI++FE+NE
Sbjct: 291 KRAGLSISDIDVFELNE 307

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385

>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase

 Score =  205 bits (524), Expect = 8e-63
 Identities = 126/333 (37%), Positives = 177/333 (53%), Gaps = 32/333 (9%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
           +  I  A RT I +   G      ADDL A  +KA++ +  +L+ + + D++ G     G
Sbjct: 2   EAYICDAIRTPIGRYG-GSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  RMAA  AG P +VP  TVNR C SGL A+   A AIKAG  D+ IA G+ESM+
Sbjct: 61  EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMS 120

Query: 169 VNSISVVGQ--------------------VNPKVEIFTQARDCLLPMGITSENVAQRFGV 208
             +  V+G+                    +NP +    +A   +  M  T+ENVA+ FG+
Sbjct: 121 -RAPFVMGKADSAFSRSAKIEDTTIGWRFINPLM----KALYGVDSMPETAENVAEEFGI 175

Query: 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTT 268
           +R++QD  A+ S +R AAA ASG F +EI+PV   ++  K G      +  D+  RP TT
Sbjct: 176 SREDQDAFALRSQQRTAAAQASGFFAEEIVPV---VIPQKKGEP--TVVDQDEHPRPETT 230

Query: 269 IADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD 328
           +  LAKLKP  + DGT TAGNAS V+DGA A+LL       + GL       + +  GV+
Sbjct: 231 LEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVE 290

Query: 329 PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
           P +MGIGP  A    +  AGL ID  ++ E+NE
Sbjct: 291 PRIMGIGPVPATQKLLARAGLSIDQFDVIELNE 323

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400

>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated

 Score =  204 bits (521), Expect = 3e-62
 Identities = 128/337 (37%), Positives = 178/337 (52%), Gaps = 40/337 (11%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
           +  I  A RT I +   G      ADDL A  LKA++ +   ++   V D++ G     G
Sbjct: 3   EAFICDAIRTPIGRYG-GALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAG 61

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  RM+A  AG P +VP  T+NR C SG+ AV   A AIKAG  ++ IA G+ESM+
Sbjct: 62  EDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMS 121

Query: 169 VNSISVVGQ--------------------VNPKVEIFTQARDCLLPMGITSENVAQRFGV 208
             +  V+G+                    VNP +    +A+  +  M  T+ENVA+ + +
Sbjct: 122 -RAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLM----KAQYGVDSMPETAENVAEDYNI 176

Query: 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTT 268
           +R +QD  A+ S +RAAAA A+G   +EI+PV   I   K      V +  D+  RP TT
Sbjct: 177 SRADQDAFALRSQQRAAAAQAAGFLAEEIVPV--TIPQKKGDP---VVVDRDEHPRPETT 231

Query: 269 IADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLP----ILGVFRSFSA 324
           +  LAKLKP F+ DGT TAGNAS V+DGA A+LL   + A + GL     ILG     + 
Sbjct: 232 LEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILG----MAT 287

Query: 325 VGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
            GV+P +MGIGPA A    +   GL ID  ++ E+NE
Sbjct: 288 AGVEPRIMGIGPAPATRKLLARLGLTIDQFDVIELNE 324

Length = 401

>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional

 Score =  203 bits (519), Expect = 7e-62
 Identities = 131/338 (38%), Positives = 182/338 (53%), Gaps = 36/338 (10%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
           + VIV+  R+ I +A +G  KD   DDL A +++A ++K   L+P+++ D+++G  L  G
Sbjct: 3   EAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGG 62

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  R+ A   G+   +P  TVNR CSS LQ       AIKAG  D+ I+AG+E+++
Sbjct: 63  EQGFNMARVVAVLLGYD-FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVS 121

Query: 169 V----NSISVVGQVNPK---------------VEIFTQAR-DCLLP-----MGITSENVA 203
                NS S+    NP                 E +   R D LLP     MG T+ENVA
Sbjct: 122 RFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLLPDVYIAMGQTAENVA 181

Query: 204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGI 263
           Q  G++R+EQD   V S  RA  A A+G F+ EI PV      P   V     +S DDG 
Sbjct: 182 QLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTL----PDGTV-----VSTDDGP 232

Query: 264 RPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFS 323
           R  TT   +++LKP F+ DGT TAGNA  ++DGA AV++M  + A + GL  L    S  
Sbjct: 233 RAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTG 292

Query: 324 AVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
             G+ P +MG+GP  A   A+  AG+ IDDI+L EINE
Sbjct: 293 VSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINE 330

Length = 406

>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional

 Score =  197 bits (503), Expect = 1e-59
 Identities = 113/322 (35%), Positives = 173/322 (53%), Gaps = 20/322 (6%)

Query: 52  VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
           VIV+A RT   K   G  KD  A +L    +K  +E+  ++  +V ++++GTVL  G  +
Sbjct: 5   VIVSAARTPFGKFG-GSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQ 63

Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
            +  R AA  AG P  V   TVN+ C+SGL+AV      I+AG   + +A G+ESM+ N+
Sbjct: 64  -IPSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMS-NA 121

Query: 172 ISVVGQVNPKVEI-FTQARDCLL-----------PMGITSENVAQRFGVTRQEQDLAAVE 219
             ++        +   +  D ++            MG+    VA+  G++R+ QD  A  
Sbjct: 122 PYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYR 181

Query: 220 SHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 279
           SH+RA +A   G+F++EI+PV    +  + G    + ++ D+  R +TTI  LAKLKP F
Sbjct: 182 SHQRAVSAHEEGRFEEEIVPVT---IPQRKG--DPIVVAKDEAPRKDTTIEKLAKLKPVF 236

Query: 280 KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVA 339
            K GT TAGNA  V+DGA A++LM    A Q+G   L    + +A+ V+       P  A
Sbjct: 237 DKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYA 296

Query: 340 IPAAVKSAGLQIDDINLFEINE 361
           I A ++  G  ++DI+LFEINE
Sbjct: 297 INALLEKTGKTVEDIDLFEINE 318

Length = 393

>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase

 Score =  197 bits (502), Expect = 1e-59
 Identities = 113/338 (33%), Positives = 181/338 (53%), Gaps = 29/338 (8%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL 105
           DV IV   RT I     GGF  +L    A +L +  ++A +E+  ++P+ V ++  G VL
Sbjct: 2   DVCIVGVARTPI-----GGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVL 56

Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
           +    +A   R AA  AG P +    TVN+ C+SG++AV   A +I+ G+ D+ +A G+E
Sbjct: 57  SANLGQA-PARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGME 115

Query: 166 SMTVNSISVVGQVNPKVEI-FTQARDCLL-----------PMGITSENVAQRFGVTRQEQ 213
           SM+ N+   + +      +      D +L            MG+ +E  A ++ ++R+EQ
Sbjct: 116 SMS-NAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQ 174

Query: 214 DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273
           D  A++S+ RA AA  +G F  EI+PV      P       V +  D+G+      A L 
Sbjct: 175 DAYAIQSYERAIAAQEAGAFAWEIVPVEV----PGGRGRPSVIVDKDEGLG-KFDPAKLR 229

Query: 274 KLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM 332
           KL+P+FK+D G+ TAGNAS +SDGA A++L+    A++ GL ++   R ++     P + 
Sbjct: 230 KLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELF 289

Query: 333 GIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAAN 370
              PA+AIP A+K AGL+   ++ +EINE    +  AN
Sbjct: 290 TTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALAN 327

Length = 394

>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed

 Score =  191 bits (488), Expect = 4e-57
 Identities = 123/360 (34%), Positives = 183/360 (50%), Gaps = 55/360 (15%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--- 105
           D + IV+  RT   K     F    A DL   V+  ++ ++ ++P  +  +V G V+   
Sbjct: 5   DRIAIVSGLRTPFAKQ-ATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMP 63

Query: 106 -APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
            AP   R +         G        +V+R C++  QAVA+VA +I AG  DIGIA G 
Sbjct: 64  EAPNIAREI-----VLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGA 118

Query: 165 ESMTVNSISV----------------VGQVNPKVEIFTQ--ARDCLLP------------ 194
           +S +V  I V                +GQ   ++++F++   RD LLP            
Sbjct: 119 DSSSVLPIGVSKKLARALVDLNKARTLGQ---RLKLFSRLRLRD-LLPVPPAVAEYSTGL 174

Query: 195 -MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEK 253
            MG T+E +A+ +G++R+EQD  A  SH+ AA A A GK  DE   V T  V P      
Sbjct: 175 RMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDE---VMTAHVPP-----Y 226

Query: 254 RVTISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312
           +  +  D+ IR ++T+ D AKL+PAF +K GT TA N++ ++DGA AVLLM  S A   G
Sbjct: 227 KQPLEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALG 286

Query: 313 LPILGVFRSFSAVGVDP-SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
           L  LG  RS++   +D    M +GPA A P A++ AGL + D+ L +++E       AN+
Sbjct: 287 LTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANL 346

Length = 428

>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional

 Score =  186 bits (472), Expect = 3e-55
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 35/341 (10%)

Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           V I  A RTA   +  G    T A  L A ++K +++ ++++P+ V ++++G V+  GS 
Sbjct: 5   VYITHAKRTAF-GSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSG 63

Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV- 169
           +    R    +AG P+ VP  T+N+ C SGL++VA  A +I  G  +I IA G E+M++ 
Sbjct: 64  QN-PARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG 122

Query: 170 ------------NSISVVG--QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDL 215
                         I +V   Q +   ++F+      + MGIT+EN++++F ++RQEQD 
Sbjct: 123 MHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSG-----VFMGITAENISKQFNISRQEQDE 177

Query: 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT--ISVDDGIRPNTTIADLA 273
            A+ SH++AA A  +G FKDEI+P+   I        K+ T     D+ +RP+T++  L+
Sbjct: 178 FALSSHKKAAKAQLAGIFKDEILPIEVTI--------KKTTSLFDHDETVRPDTSLEILS 229

Query: 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG 333
           KL+PAF K+G  TAGNAS ++DGA  ++++      +  L  L    S+++ GVDPS+MG
Sbjct: 230 KLRPAFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMG 289

Query: 334 IGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMVN 374
             P  A   A+  AG  ++D+ + E+NE      A +I VN
Sbjct: 290 TAPVPASQKALSKAGWSVNDLEVIEVNEAFA---AQSIYVN 327

Length = 392

>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional

 Score =  183 bits (465), Expect = 4e-54
 Identities = 117/333 (35%), Positives = 166/333 (49%), Gaps = 33/333 (9%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLAPG 108
           +  I  A RT I +   G      ADDL A  LKA++E+   ++ + + D++ G     G
Sbjct: 3   EAFICDAIRTPIGRYG-GALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAG 61

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  RM+   AG P  VP  T+NR C SG+ AV   A AIK+G   + IA G+ESM+
Sbjct: 62  EDNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMS 121

Query: 169 VNSISVVGQ--------------------VNPKVEIFTQARDCLLPMGITSENVAQRFGV 208
             +  V+G+                    VNP +    +    +  M  T+ENVA  + V
Sbjct: 122 -RAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLM----KQLYGVDSMPETAENVATDYNV 176

Query: 209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTT 268
           +R +QD  A+ S ++AA A A G    EI+PV    +  K G    V+   D+  R  TT
Sbjct: 177 SRADQDAFALRSQQKAARAQADGTLAQEIVPVT---IPQKKGDPLVVS--RDEHPRE-TT 230

Query: 269 IADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD 328
           +  LAKLK   + DGT TAGNAS V+DGA A+LL   + A + GL         +  GV+
Sbjct: 231 LEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE 290

Query: 329 PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
           P VMGIGPA A    +   G+ +D  ++ E+NE
Sbjct: 291 PRVMGIGPAPATQKLLARLGMTLDQFDVIELNE 323

Length = 400

>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional

 Score =  181 bits (461), Expect = 2e-53
 Identities = 115/333 (34%), Positives = 169/333 (50%), Gaps = 25/333 (7%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           D  I    R+   +   G       DDL A V++ ++EK+     ++ D+++G     G 
Sbjct: 3   DAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGE 61

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
                 R A   AG P TVP +TVNR C+SGL AV D A AI  G  D+ +A G+ESM+ 
Sbjct: 62  DSRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSR 121

Query: 170 NSI-----------------SVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212
                               + +G   P  +I  Q  +  +P   T +NVA  FG++R++
Sbjct: 122 APFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPE--TGDNVAAEFGISRED 179

Query: 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272
            D  A +S  +  AA   G F DEI P+  ++   +    K V    D+  RP++T+  L
Sbjct: 180 ADRFAAQSQAKYQAAKEEGFFADEITPI--EVPQGRKLPPKLVA--EDEHPRPSSTVEAL 235

Query: 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM 332
            KLKP F+  G  TAGNAS ++DGA A+L+  R+   + GL  +    S +A GV+P +M
Sbjct: 236 TKLKPLFE-GGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIM 294

Query: 333 GIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP 365
           GIGP  AI  A+  AGL +DD+++ EINE    
Sbjct: 295 GIGPVEAIKKALARAGLTLDDMDIIEINEAFAS 327

Length = 401

>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional

 Score =  178 bits (453), Expect = 2e-52
 Identities = 116/327 (35%), Positives = 170/327 (51%), Gaps = 27/327 (8%)

Query: 53  IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA 112
           IV A RT + K ++GG       DL A VLK ++++T ++P+ V D++ G V   G    
Sbjct: 6   IVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAG 64

Query: 113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI 172
              R +   AG PE VP  TV+RQC S  QA+   A A+ +G  D+ +A G+++M+   I
Sbjct: 65  NIARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPI 124

Query: 173 S---VVGQVNPKVEIFTQARDCLLPMG-------ITSENVAQRFGVTRQEQDLAAVESHR 222
           S     G+       F +++  L   G         +E +A+++G++R+E +  A+ESHR
Sbjct: 125 SSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESHR 184

Query: 223 RAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD 282
           RA AA  +G+F +EI+PV         GV       VD+G R  T++  +A LKP   + 
Sbjct: 185 RAFAAIRAGRFDNEIVPVG--------GVT------VDEGPR-ETSLEKMAGLKP-LVEG 228

Query: 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPA 342
           G  TA  ASQ+SDGA AVLL       + GL         S  G DP  M   P  A   
Sbjct: 229 GRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRY 288

Query: 343 AVKSAGLQIDDINLFEINEVLVPIIAA 369
           A++  GL IDDI++ EINE   P++ A
Sbjct: 289 ALEKTGLSIDDIDVVEINEAFAPVVLA 315

Length = 382

>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated

 Score =  178 bits (454), Expect = 2e-52
 Identities = 116/342 (33%), Positives = 170/342 (49%), Gaps = 47/342 (13%)

Query: 50  DVVIVAAYRTAICKAKRGG-FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
           +  I  A RT   K K+ G   +     L A +L+A+ ++  L+ + V D+V+G V   G
Sbjct: 3   EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
              A   R A   AG PETVP   +NR C+SGL+AV   A  +++G  D+ IA G+ESM 
Sbjct: 63  DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESM- 121

Query: 169 VNSISVVGQ--------VNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVES 220
               S V          ++P     T      +P GI+++ +A ++G +R++ D  AVES
Sbjct: 122 ----SRVPMGSDGGAWAMDPSTNFPTY----FVPQGISADLIATKYGFSREDVDAYAVES 173

Query: 221 HRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
            +RAAAA A G F   ++PV  K  +  T ++       D+ +RP TT+  LAKLKP+F 
Sbjct: 174 QQRAAAAWAEGYFAKSVVPV--KDQNGLTILDH------DEHMRPGTTMESLAKLKPSFA 225

Query: 281 KDGTT---------------------TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVF 319
             G                        AGN+S + DGA AVL+         GL      
Sbjct: 226 MMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARI 285

Query: 320 RSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
            + + +G DP++M  GP  A   A+  AGL +DDI+LFE+NE
Sbjct: 286 VATATIGSDPTIMLTGPVPATRKALAKAGLTVDDIDLFELNE 327

Length = 402

>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional

 Score =  176 bits (448), Expect = 1e-51
 Identities = 113/314 (35%), Positives = 162/314 (51%), Gaps = 10/314 (3%)

Query: 52  VIVAAYRTAICKAKRGGFKDTL-ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           VIV A RT I   KR G+   L A +LL  V +AV+++  ++P +V  ++ G V   G  
Sbjct: 5   VIVEAVRTPI--GKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQ 62

Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R A  +AG P  V   T++ QC S  QA   VA  I AG  D+GIA G+E+M+  
Sbjct: 63  SNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMS-- 120

Query: 171 SISVVGQVNPKV-EIFTQARDCLLPMGITS-ENVAQRFGVTRQEQDLAAVESHRRAAAAT 228
            + +     P        + D  +P    + E +A+R G+TR++ D   + S RRAA A 
Sbjct: 121 RVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAW 180

Query: 229 ASGKFKDEIIPVNTKIVDP-KTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA 287
           A G+F  EI PV   ++D       +   ++ D G+R +TT+  LA LKP   + G  TA
Sbjct: 181 AEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLR-DTTMEGLAGLKPVL-EGGIHTA 238

Query: 288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSA 347
           G +SQ+SDGA AVL M    A   GL       + + VG +P     GP  A    ++ A
Sbjct: 239 GTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKA 298

Query: 348 GLQIDDINLFEINE 361
           G++I DI+L EINE
Sbjct: 299 GMKIGDIDLVEINE 312

Length = 387

>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional

 Score =  176 bits (448), Expect = 1e-51
 Identities = 114/342 (33%), Positives = 179/342 (52%), Gaps = 49/342 (14%)

Query: 53  IVAAYRTAICKAKRGGFKDTLAD----DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
           IVAA RTA    ++GG    LA     DL A VL A+++++  +P+ + D+++G V   G
Sbjct: 6   IVAAARTA--GGRKGG---RLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVG 60

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  R A   +  PE+VP  +++RQC S  QA+   A A+ +G  DI IAAG+ESMT
Sbjct: 61  EQATNVARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMT 120

Query: 169 VNSISVVGQV----------NPKVE------IFTQARDCLLPMGITSENVAQRFGVTRQE 212
              +     +          +P +E       F+Q        G  +E +A+++G+++ +
Sbjct: 121 RVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQF------TG--AEMMAKKYGLSKDQ 172

Query: 213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272
            D  A++SH+RA AAT +GKFK EI+P+     D    +       VD+GIR + T+  +
Sbjct: 173 LDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHT-----VDEGIRFDATLEGI 227

Query: 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV-----FRSFSAVGV 327
           A +K    + G  TA  ASQ+ DGA  V+++      ++GL  LGV         + +G 
Sbjct: 228 AGVKL-IAEGGRLTAATASQICDGASGVMVVN-----ERGLKALGVKPLARIHHMTVIGG 281

Query: 328 DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAA 369
           DP +M   P  A   A+K AG++IDDI+L+E+NE    +  A
Sbjct: 282 DPVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLA 323

Length = 390

>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional

 Score =  173 bits (439), Expect = 1e-50
 Identities = 106/320 (33%), Positives = 163/320 (50%), Gaps = 32/320 (10%)

Query: 52  VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
           VIV A RT I K K G  KD     L AP+L  +   ++    E+ D+++G V+ PG   
Sbjct: 4   VIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFL---SKGMEREIDDVILGNVVGPGGNV 59

Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
           A   R++A  AG    +P  T++RQC +GL+A+      I+ G     IA G+ES + + 
Sbjct: 60  A---RLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP 116

Query: 172 ISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231
                + +P+  I          MG+ +E VA+R+ +TR+ QD  A  S++R   A   G
Sbjct: 117 FQNRARFSPET-IGDPD------MGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKG 169

Query: 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL-AKLKPAFKKDGTTTAGNA 290
              +EI+  N        G+        D+ I+       +  + KPAF  +GT TAGN+
Sbjct: 170 YIHEEILSFN--------GLL-------DESIKKEMNYERIIKRTKPAFLHNGTVTAGNS 214

Query: 291 SQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGL 349
             V+DGA AVL+M+   A + G  P+L   RS + VGVDP++ G GP  A+   +    +
Sbjct: 215 CGVNDGACAVLVMEEGQARKLGYKPVLRFVRS-AVVGVDPNLPGTGPIFAVNKLLNEMNM 273

Query: 350 QIDDINLFEINEVLVPIIAA 369
           +++DI+ FEINE     + A
Sbjct: 274 KVEDIDYFEINEAFASKVVA 293

Length = 361

>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional

 Score =  173 bits (441), Expect = 3e-50
 Identities = 117/347 (33%), Positives = 170/347 (48%), Gaps = 51/347 (14%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
            V IV   RT   KA RGG     A DL     +A++ +    P ++ ++++G    P  
Sbjct: 4   PVYIVDGARTPFLKA-RGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCA-MPSP 61

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT- 168
             A   R+ A   G  E VP  TV R C+SG+QA+   A  I  G  D+ +A G+E+M+ 
Sbjct: 62  DEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121

Query: 169 ---------------VNSISVVGQVNPKVEIFTQARD-----------------CLLPMG 196
                            +   +GQ   K+    + R                    L MG
Sbjct: 122 APLLFSEKMVRWLAGWYAAKSIGQ---KLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMG 178

Query: 197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT 256
            T+E +A RFG+TR++ D  A  SH+R AAA A G+ K E++P    + D          
Sbjct: 179 QTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVP----LFDRDGKFYDH-- 231

Query: 257 ISVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK-GLP 314
              DDG+RP++++  LAKLKP F +  G  TAGN+SQ++DGA   LL+    AV+K GLP
Sbjct: 232 ---DDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGA-CWLLLASEEAVKKYGLP 287

Query: 315 ILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
            LG         +DPS MG+GP  A    ++  GL ++D++L+EINE
Sbjct: 288 PLGRIVDSQWAALDPSQMGLGPVHAATPLLQRHGLTLEDLDLWEINE 334

Length = 426

>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional

 Score =  161 bits (408), Expect = 9e-46
 Identities = 115/335 (34%), Positives = 161/335 (48%), Gaps = 25/335 (7%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
           D +VI +A RT +  A +G F    A  L A  + A +E+  L P ++ ++V+G VL  G
Sbjct: 7   DPIVIASAARTPMA-AFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAG 65

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
             +A   R AA  AG P +V   TVN+ C SG++A       + AG  D+ +A G+ESMT
Sbjct: 66  QGQA-PARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMT 124

Query: 169 VNSISVV-----------GQVNPKVEI--FTQARDCLLPMGITSENVAQRFGVTRQEQDL 215
            N+  ++           GQV   + +     A D    MG  +E  A  +G TR+ QD 
Sbjct: 125 -NAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEECAGEYGFTREAQDA 183

Query: 216 AAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL 275
            A+ES  RA  A   G F  EI PV    V  K G      I  D+          +  L
Sbjct: 184 FAIESLARAKRANEDGSFAWEIAPVT---VAGKKG---DTVIDRDEQPF-KANPEKIPTL 236

Query: 276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIG 335
           KPAF K GT TA N+S +SDGA A+++M+ S A + GL  L      S     PS     
Sbjct: 237 KPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTA 296

Query: 336 PAVAIPAAVKSAGLQIDDINLFEINE--VLVPIIA 368
           P  AI    +  G +  +++LFEINE   +V + A
Sbjct: 297 PVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAA 331

Length = 397

>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional

 Score =  159 bits (402), Expect = 4e-45
 Identities = 109/327 (33%), Positives = 167/327 (51%), Gaps = 32/327 (9%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           DV IV+A RTAI K  R  F    A  L    +KAVI+  +L+P+ V ++++G V+  G 
Sbjct: 3   DVYIVSAKRTAIGKFGRS-FSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
            +      AA++AG P  V   TVN  C+SG+ AV   A  I  G  D+ IA G+E+M+ 
Sbjct: 62  GQN-PAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSN 120

Query: 170 NSISVVGQV--NPKVEIFTQAR--DCLLP-----------MGITSENVAQRFGVTRQEQD 214
               +   +   PK  +    +  D +L            MG+++E  A+++G+TR+  D
Sbjct: 121 APFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVSAERTARKYGITREMAD 180

Query: 215 LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274
             +V+S+ RA  AT SG+F++EI+P N               +  D+GIR  TT+ DLAK
Sbjct: 181 EYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDLAK 225

Query: 275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI 334
           L PAF K+G  TAGN++Q+SDG  A+++       + GL  +     + +  +DP     
Sbjct: 226 LPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVE 285

Query: 335 GPAVAIPAAVKSAGLQIDDINLFEINE 361
            P  A    ++     ID  +L E NE
Sbjct: 286 APIPATRKLLEKQNKSIDYYDLVEHNE 312

Length = 388

>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI

 Score =  151 bits (383), Expect = 7e-42
 Identities = 110/357 (30%), Positives = 178/357 (49%), Gaps = 49/357 (13%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--- 105
           + + IVA  RT   + +   F    A DL   V+  ++ ++ ++P  +  +V G V+   
Sbjct: 7   ERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMP 65

Query: 106 -APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
            AP   R +         G        +V R C++  Q+  +VA +I AG  DIGIA G 
Sbjct: 66  EAPNIAREI-----VLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGA 120

Query: 165 ESMTVNSISVVGQV-------------NPKVEIFTQ--ARDCL------------LPMGI 197
           +S +V  I V  ++               K+++F++   +D +            L MG 
Sbjct: 121 DSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQ 180

Query: 198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTI 257
           T+E +A+ +G+TR EQD  A  SH  A+ A   GK   E++   T    P      +  I
Sbjct: 181 TAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVM---TAFPPP-----YKQWI 232

Query: 258 SVDDGIRPNTTIADLAKLKPAF-KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL 316
           + D+ IR N+T+A  AKL+PAF +K G+ TA N++ ++DGA AV+LM+   A + G+  L
Sbjct: 233 AEDNNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPL 292

Query: 317 GVFRS--FSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
           G  RS  F+A+ V    M +GP+ A P A++ AGL + D+ L +++E       AN+
Sbjct: 293 GYIRSYAFTAIDVW-QDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANV 348

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430

>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional

 Score =  144 bits (366), Expect = 2e-39
 Identities = 105/348 (30%), Positives = 151/348 (43%), Gaps = 44/348 (12%)

Query: 50  DVVIVAAYRT--AICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAP 107
           +  I+ A RT   I K  +G         L A VLKA+ E+  LN ++V DI+  T    
Sbjct: 3   EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62

Query: 108 GSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167
           G       RMAA  AG+       T++R C  G+ +V   A  I +G+ D+ IA G E M
Sbjct: 63  GKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMM 122

Query: 168 TVNSISVVGQVNPKVEIFT--------QARDCLLPMGITSENVAQRFGVTRQEQDLAAVE 219
           +  +      +                +A       G+  + +A   G+TR+  D   +E
Sbjct: 123 SYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALDALGLE 182

Query: 220 SHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF 279
           S RRAA A   G+F   ++PV           +  V +  ++  RP TT   LA LKPAF
Sbjct: 183 SQRRAARAIKEGRFDKSLVPV----YRD----DGSVALDHEEFPRPQTTAEGLAALKPAF 234

Query: 280 KK-------DGTTT-------------------AGNASQVSDGAGAVLLMKRSLAVQKGL 313
                    D  TT                   AGN+S V DGA A+LL  ++ A + GL
Sbjct: 235 TAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGL 294

Query: 314 PILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
                  + + +G DP++M   P  A    +  AGL  DDI+L+EINE
Sbjct: 295 KPRARIVAMANMGDDPTLMLNAPVPAAKKVLAKAGLTKDDIDLWEINE 342

Length = 417

>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional

 Score =  142 bits (360), Expect = 1e-38
 Identities = 100/350 (28%), Positives = 156/350 (44%), Gaps = 59/350 (16%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
            V I+   R    ++  G + D    D+L   L  ++++  L    +G++V G VL    
Sbjct: 8   RVAILGGNRIPFARSN-GAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR 66

Query: 110 ----TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
               TR  EC + +  +  P T P   + + C +GL+A   VA  I  G  D GIA G++
Sbjct: 67  DFNLTR--ECVLGSALS--PYT-PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVD 121

Query: 166 SM-----------------------TVNSISVVGQVNPKVEIFTQARD----CLLPMGIT 198
           +                        T + +  +G++ PK       R+      L MG  
Sbjct: 122 TTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEH 181

Query: 199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
           +   A+ +G++R+ QD  A  SH+  AAA   G F D I P          G+ +     
Sbjct: 182 AAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFL--------GLTR----- 228

Query: 259 VDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL 316
            D+ +RP++++  LAKLKP F K    T TAGN++ ++DGA  VLL     A + GLP+L
Sbjct: 229 -DNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVL 287

Query: 317 GVFRSFSAVGVDPSVMG-----IGPAVAIPAAVKSAGLQIDDINLFEINE 361
                     VD  V G     + PA A+P  +   GL + D + +EI+E
Sbjct: 288 AYLVDAETAAVD-FVHGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHE 336

Length = 427

>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score =  122 bits (306), Expect = 2e-31
 Identities = 85/323 (26%), Positives = 132/323 (40%), Gaps = 42/323 (13%)

Query: 54  VAAYRTAICK--AKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTR 111
             A  TA  K   + G   + LA +  A  + A +E   +    V +  +G VL      
Sbjct: 1   AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVL-GAGEG 59

Query: 112 AMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNS 171
               + AA +AG  +  P   +N  C SGL+A+A     I  G  +  +A G E M  ++
Sbjct: 60  QNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSA 119

Query: 172 ISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASG 231
            +   + +  V I                         R   D  A+     A AA   G
Sbjct: 120 ENNAKEKHIDVLINKYG--------------------MRACPDAFALAGQAGAEAAEKDG 159

Query: 232 KFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIR--PNTTIADLAKLKPAFKKDGTTTAGN 289
           +FKDE      K      G +  +    D+ I+     ++ ++AKL+PAF K+   TAGN
Sbjct: 160 RFKDEFAKFGVK------GRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGN 213

Query: 290 ASQVSDGAGAVLLMKRSLAVQKGLPI-------LGVFRSFSAVGVDPS----VMGIGPAV 338
           A  ++DGA A +LM  + A + GL         L +    ++   D      V G GP  
Sbjct: 214 ACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIE 273

Query: 339 AIPAAVKSAGLQIDDINLFEINE 361
           A   A++ AGL I D++L E ++
Sbjct: 274 AARKALEKAGLGIGDLDLIEAHD 296

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393

>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain

 Score = 74.2 bits (183), Expect = 2e-16
 Identities = 32/59 (54%), Positives = 40/59 (67%)

Query: 313 LPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
           L  L   RS++ VGVDP++MGIGPA AIP A+K AGL ++DI+LFEINE       A  
Sbjct: 1   LKPLARIRSYATVGVDPAIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVA 59

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 123

>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

 Score = 56.9 bits (138), Expect = 5e-09
 Identities = 72/303 (23%), Positives = 109/303 (35%), Gaps = 63/303 (20%)

Query: 76  DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR 135
           +L A   +A ++   L P+++  +VVG     G  ++    + A Y G       R V  
Sbjct: 18  ELAAEAARAALDDAGLEPADIDAVVVGNAAG-GRFQSFPGALIAEYLGLLGKPATR-VEA 75

Query: 136 QCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV--NSISVVGQVNPKVEIFTQARDCLL 193
             +SG  AV   A AI +GL D+ +  G E M+         G+ +       +    L 
Sbjct: 76  AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLT 135

Query: 194 PMGITSENVAQR----FGVTRQEQDLAAV-ESHRRAAAATASGKFKDEIIPV----NTKI 244
           P  + +   A+R    +G TR  +DLA V   + R AA     +F+  I       +  I
Sbjct: 136 PPALYA-LAARRYMHRYGTTR--EDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMI 192

Query: 245 VDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMK 304
            DP                                         +   VSDGA AV+L  
Sbjct: 193 ADP-------------------------------------LRLLDCCPVSDGAAAVVLAS 215

Query: 305 RSLAVQKGLP---ILGV-----FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL 356
              A +       ILGV       S S      S+      +A   A K AG+  DDI++
Sbjct: 216 EERARELTDRPVWILGVGAASDTPSLSERDDFLSLDAA--RLAARRAYKMAGITPDDIDV 273

Query: 357 FEI 359
            E+
Sbjct: 274 AEL 276

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375

>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 29/178 (16%)

Query: 64  AKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMA---AF 120
           +K G   D    +L    +K  +    ++ +++  +VVG+     + R +E   A   A 
Sbjct: 11  SKFGRRDDVSVQELAWESIKEALNDAGVSQTDIELVVVGST----AYRGIELYPAPIVAE 66

Query: 121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM----TVNSISVVG 176
           Y+G    VPLR V   C++GL A     TA+ +GL D+ IA G++ M    T  S+++ G
Sbjct: 67  YSGLTGKVPLR-VEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGG 125

Query: 177 QVNPKVEIFTQARDCLLPMGIT---------SENVAQRFGVTRQEQDLAAVESHRRAA 225
           +       +          G T         + ++A  +G T ++  L +V++H+  A
Sbjct: 126 RGGNYQWEYHF-------YGTTFPTYYALYATRHMA-VYGTTEEQMALVSVKAHKYGA 175

Length = 385

>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG- 108
           DV I+   +T     K G   D    DL        +E   ++  ++  + VG + A   
Sbjct: 3   DVAIIGVGQT-----KFGELWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLF 57

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
            ++     + A YAG    +P   V   C+SG  A+     A+ +G  D+ +AAG+E MT
Sbjct: 58  VSQEHIAALIADYAGLAP-IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMT 116

Length = 389

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS----VMGIGPAVAIPA 342
                   DGA A ++     A+++G        S +A     S    V G G A A   
Sbjct: 94  GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153

Query: 343 AVKSAGLQIDDINLFEINEVLVPIIAA 369
           A++ AGL   DI+  E +    PI  A
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDA 180

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 72  TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR 131
             A +L     +  I    L+   +  ++VGT    G       +  A++ G     P  
Sbjct: 5   ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQ-LAYHLGISG-GPAY 62

Query: 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES 166
           +VN+ C++GL A+A     ++ G  DI +A G E 
Sbjct: 63  SVNQACATGLTALALAVQQVQNGKADIVLAGGSEE 97

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	374
PLN02287	452	3-ketoacyl-CoA thiolase	100.0
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	100.0
PRK08242	402	acetyl-CoA acetyltransferase; Validated	100.0
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	100.0
PRK09051	394	beta-ketothiolase; Provisional	100.0
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	100.0
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	100.0
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	100.0
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	100.0
KOG1389	435	consensus 3-oxoacyl CoA thiolase [Lipid transport	100.0
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	100.0
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	100.0
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	100.0
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	100.0
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	100.0
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	100.0
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	100.0
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	100.0
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	100.0
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	100.0
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	100.0
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	100.0
PRK05790	393	putative acyltransferase; Provisional	100.0
KOG1390	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	100.0
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	100.0
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	100.0
KOG1391	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	100.0
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	100.0
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	100.0
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	100.0
PLN02644	394	acetyl-CoA C-acetyltransferase	100.0
PRK06157	398	acetyl-CoA acetyltransferase; Validated	100.0
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	100.0
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06158	384	thiolase; Provisional	100.0
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	100.0
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	100.0
PRK06059	399	lipid-transfer protein; Provisional	100.0
PRK08256	391	lipid-transfer protein; Provisional	100.0
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	100.0
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	100.0
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	100.0
PRK07855	386	lipid-transfer protein; Provisional	100.0
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	100.0
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	100.0
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	100.0
PRK07937	352	lipid-transfer protein; Provisional	100.0
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	100.0
PRK08257	498	acetyl-CoA acetyltransferase; Validated	100.0
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	100.0
KOG1392	465	consensus Acetyl-CoA acetyltransferase [Lipid tran	100.0
KOG1406	408	consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44	100.0
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	99.88
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	99.88
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.88
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	99.87
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.86
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.86
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	99.85
KOG1394	440	consensus 3-oxoacyl-(acyl-carrier-protein) synthas	99.84
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.84
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.83
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	99.83
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	99.82
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	99.82
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	99.81
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.8
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	99.8
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.79
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	99.79
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	99.78
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.78
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.77
cd00832	399	CLF Chain-length factor (CLF) is a factor required	99.77
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.77
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.75
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.71
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.7
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.68
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	99.65
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.63
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.61
COG3321	1061	Polyketide synthase modules and related proteins [	99.61
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	99.58
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	99.57
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	99.56
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.55
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.55
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	99.55
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.55
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	99.55
PRK08304	337	stage V sporulation protein AD; Validated	99.54
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.52
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	99.52
PRK04262	347	hypothetical protein; Provisional	99.49
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	99.48
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.46
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.43
PRK06840	339	hypothetical protein; Validated	99.42
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	99.4
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.38
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	99.38
PRK12404	334	stage V sporulation protein AD; Provisional	99.36
PLN03169	391	chalcone synthase family protein; Provisional	99.24
PLN03173	391	chalcone synthase; Provisional	99.23
PLN03170	401	chalcone synthase; Provisional	99.21
PLN03172	393	chalcone synthase family protein; Provisional	99.2
PLN02577	459	hydroxymethylglutaryl-CoA synthase	99.2
PLN03171	399	chalcone synthase-like protein; Provisional	99.19
PLN02854	521	3-ketoacyl-CoA synthase	99.18
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	99.17
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	99.16
PLN02932	478	3-ketoacyl-CoA synthase	99.11
PLN02377	502	3-ketoacyl-CoA synthase	99.05
PLN02192	511	3-ketoacyl-CoA synthase	99.0
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	98.97
PLN03168	389	chalcone synthase; Provisional	98.92
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.87
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	98.68
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	98.57
PLN00415	466	3-ketoacyl-CoA synthase	98.44
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	98.44
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	98.43
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	98.26
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	98.18
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	98.14
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	96.77
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	96.43
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	93.23
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	90.4
PRK08257	498	acetyl-CoA acetyltransferase; Validated	88.85
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	87.51
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	86.6
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	86.51
KOG1393	462	consensus Hydroxymethylglutaryl-CoA synthase [Lipi	85.84
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	85.71
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	84.97
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	84.83
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	84.74
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	83.71
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	83.39
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	82.6
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	82.34
COG1214	220	Inactive homolog of metal-dependent proteases, put	82.0
PRK07937	352	lipid-transfer protein; Provisional	81.48
PRK04262	347	hypothetical protein; Provisional	81.44
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	80.42
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	80.3

>PLN02287 3-ketoacyl-CoA thiolase

Probab=100.00  E-value=5.8e-69  Score=536.05  Aligned_cols=368  Identities=80%  Similarity=1.184  Sum_probs=317.3

Q ss_pred             ChHHhHHHHHHHhccCCCCCCCCCCccccccccccccccccCCCCCCCCceEEEeeecccccccCCCCCCCCCHHHHHHH
Q 017289            1 MEKALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAP   80 (374)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~   80 (374)
                      |||++.|||.||.||.||||..|   ..|++-|.+|..+.||+.+.+.++|+|||+++|||+|...+.+.+.++.+|+.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~e   77 (452)
T PLN02287          1 MEKAINRQRVLLRHLRPSSSEPS---SLSASACAAGDSAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAP   77 (452)
T ss_pred             CchHHHHHHHHHhhccCCCCCcc---ccccccccccchhhhccccCCCCCEEEEEeecCCCccCCCCCcCCCCHHHHHHH
Confidence            89999999999999999998776   478999999999999999989999999999999999743466778999999999


Q ss_pred             HHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEE
Q 017289           81 VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGI  160 (374)
Q Consensus        81 A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vL  160 (374)
                      |+++||+|+|++++|||.+++|+..+......+.++.++.++|++...|+++|+++|+||..++..|+++|++|.+|+||
T Consensus        78 A~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvL  157 (452)
T PLN02287         78 VLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGI  157 (452)
T ss_pred             HHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEE
Confidence            99999999999999999999998866544345677888899999755899999999999999999999999999999999


Q ss_pred             EEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceee
Q 017289          161 AAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPV  240 (374)
Q Consensus       161 v~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~  240 (374)
                      |+|+|+|+..|..+.....+.+...........+|++.+++||++||+|+|++++|+++||+||.+|+.+|+|++||+|+
T Consensus       158 v~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv  237 (452)
T PLN02287        158 GAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPV  237 (452)
T ss_pred             EEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeee
Confidence            99999999877533222221111101001123459999999999999999999999999999999999999999999999


Q ss_pred             eccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEE
Q 017289          241 NTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR  320 (374)
Q Consensus       241 ~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~  320 (374)
                      +++..+++-+..++++++.|+.+|+++++|++.++||+|+++++||++|||+++|||+|+||+|++.|++++.+|++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~  317 (452)
T PLN02287        238 HTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFR  317 (452)
T ss_pred             eccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEE
Confidence            87532121111123468999999999999999999999988899999999999999999999999999999999999999


Q ss_pred             EEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          321 SFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       321 g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      +++....+|..++.+++.++++||++|||+++|||++|+||+|++++++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~l~~~  368 (452)
T PLN02287        318 SFAAVGVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCC  368 (452)
T ss_pred             EEeeccCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHHHHHH
Confidence            988766677766677889999999999999999999999999999999974

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.9e-60  Score=468.48  Aligned_cols=314  Identities=35%  Similarity=0.489  Sum_probs=275.5

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|||||++||||+| +.|.++++++.||+.++++++|+|+|+++++||.+++|++.+.+.++.++++.+++.+|++.++
T Consensus         2 ~~V~Ivg~~rTpfgk-~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~   80 (387)
T PRK07850          2 GNPVIVEAVRTPIGK-RNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV   80 (387)
T ss_pred             CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence            479999999999998 4678889999999999999999999999999999999998755433467899999999997679


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc-C-cC-ChhhhhhcccccCCCchHHHHHHHHHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-G-QV-NPKVEIFTQARDCLLPMGITSENVAQR  205 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~  205 (374)
                      |+++|+++|+||+.|+..|++.|++|++|++|++|+|+||+.|+... . .. .....+  ... ....|+..+++|+++
T Consensus        81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~--~~~-~~~~m~~~ae~~~~~  157 (387)
T PRK07850         81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDS--WDI-DMPNQFEAAERIAKR  157 (387)
T ss_pred             ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccc--ccc-CcchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999885211 1 01 011000  011 123567889999999


Q ss_pred             hCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccc---c-CCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC
Q 017289          206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKI---V-DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK  281 (374)
Q Consensus       206 ~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~---~-nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~  281 (374)
                      ||+|||++|+|+++||+||.+++.+|+|++||+|++++.   + ||+++++   +++.|+.+| ++|+|+|++++|+| +
T Consensus       158 ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~---~~~~D~~~r-~~t~e~l~~l~p~~-~  232 (387)
T PRK07850        158 RGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETR---LVTRDQGLR-DTTMEGLAGLKPVL-E  232 (387)
T ss_pred             hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCce---EeecCCCcc-cCCHHHhccCCCCC-C
Confidence            999999999999999999999999999999999998764   2 9999875   489999999 89999999999998 5


Q ss_pred             CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecC
Q 017289          282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE  361 (374)
Q Consensus       282 ~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d  361 (374)
                      ++.+|.+|||+++|||+|+||+|+++|++++.+|.+||+|++....+|.....++..++++||+++||+++|||++|+||
T Consensus       233 ~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d  312 (387)
T PRK07850        233 GGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINE  312 (387)
T ss_pred             CCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchhhcchHHHHHHHHHHHcCCCHHHcCeeeecc
Confidence            56679999999999999999999999999999898899999987777777777889999999999999999999999999


Q ss_pred             cchhHHHHhh
Q 017289          362 VLVPIIAANI  371 (374)
Q Consensus       362 ~Fa~~~l~~~  371 (374)
                      ||++++++++
T Consensus       313 ~F~~~~l~~~  322 (387)
T PRK07850        313 AFASVVLSWA  322 (387)
T ss_pred             cchHHHHHHH
Confidence            9999999875

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=3.2e-59  Score=459.50  Aligned_cols=315  Identities=33%  Similarity=0.464  Sum_probs=272.2

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|||||++||||+| +.|.++++++.||+.++++++|+|+|+++++||.+++|++.+...++.+++|.+....||+.++
T Consensus         2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v   80 (390)
T PRK06504          2 AEAYIVAAARTAGGR-KGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV   80 (390)
T ss_pred             CceEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence            479999999999998 5688899999999999999999999999999999999998754433468899888888997789


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC------cCCh-hhhhhccccc-CCCchHHHHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG------QVNP-KVEIFTQARD-CLLPMGITSE  200 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~------~~~~-~~~~~~~~~~-~~~~~~~~a~  200 (374)
                      |+++|+++|+||+.|+..|++.|++|++|++|++|+|+|++.|+....      .... .+......+. ...+|+..++
T Consensus        81 P~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae  160 (390)
T PRK06504         81 PGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAE  160 (390)
T ss_pred             ceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHH
Confidence            999999999999999999999999999999999999999987752111      0100 1100001111 1346788899


Q ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeecccc--CCCCCcccceEEeccCCCCCCCCHHHHhcCCCc
Q 017289          201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIV--DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA  278 (374)
Q Consensus       201 ~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~--nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi  278 (374)
                      +|+++||+|||++|+|+++||+||.+|+.+|+|++||+|+++...  ||       ..++.||.+|+++|+|+|+++||+
T Consensus       161 ~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~-------~~~~~De~~r~~~t~e~l~~~~~~  233 (390)
T PRK06504        161 MMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSG-------EMHTVDEGIRFDATLEGIAGVKLI  233 (390)
T ss_pred             HHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCc-------eEEccCCCCCCCCCHHHHhcCCCC
Confidence            999999999999999999999999999999999999999976532  34       357889999999999999999999


Q ss_pred             ccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       279 ~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                      + +++++|++|||+++|||+|+||+|+++|++++++|++||.+++....+|..+..++..|++++|+++||+++|||++|
T Consensus       234 ~-~~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~Did~~E  312 (390)
T PRK06504        234 A-EGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVIMLEAPLPATERALKKAGMKIDDIDLYE  312 (390)
T ss_pred             C-CCCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchhhhccHHHHHHHHHHHcCCCHHHCCEEE
Confidence            6 348999999999999999999999999999999999899998877777766777889999999999999999999999


Q ss_pred             ecCcchhHHHHhhh
Q 017289          359 INEVLVPIIAANIM  372 (374)
Q Consensus       359 i~d~Fa~~~l~~~~  372 (374)
                      +||||++++++++-
T Consensus       313 i~d~Fa~~~l~~~e  326 (390)
T PRK06504        313 VNEAFASVPLAWLK  326 (390)
T ss_pred             ecccchHHHHHHHH
Confidence            99999999999863

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=100.00  E-value=4.3e-59  Score=459.17  Aligned_cols=313  Identities=35%  Similarity=0.532  Sum_probs=274.3

Q ss_pred             CceEEEeeeccccccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKA-KRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~-~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+||++.||||+|. ++|.+++.++.+|+.+|++++|+++|+++++||.|++|+..+.+..+.++++.++..+|++.+
T Consensus         2 ~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~   81 (402)
T PRK08242          2 TEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPET   81 (402)
T ss_pred             CcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCC
Confidence            4799999999999983 478999999999999999999999999999999999999887544346889999999999767


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhccc-ccCCCchHHHHHHHHHHh
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQA-RDCLLPMGITSENVAQRF  206 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~  206 (374)
                      +|+++|+++|+||+.+|..|++.|++|.+|++|++|+|+||+.|+.....  ..+.+.... ......|++++++|+++|
T Consensus        82 ~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~--~~~~~~~~~~~~~~~~mg~~Ae~~a~~~  159 (402)
T PRK08242         82 VPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGG--AWAMDPSTNFPTYFVPQGISADLIATKY  159 (402)
T ss_pred             CCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCc--ccccCcccccccccCCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999988632111  001010001 111346899999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC----C
Q 017289          207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK----D  282 (374)
Q Consensus       207 G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~----~  282 (374)
                      |+|||++|+|+++||+||.+++.+|+|++||+|++.    ++    ...++++|+.+|+++|+|+|.++||+|.+    +
T Consensus       160 gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~----~~----~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~  231 (402)
T PRK08242        160 GFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKD----QN----GLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMG  231 (402)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeec----CC----CCEeeCCCCCCCCCCCHHHHhCCCCCccCccccC
Confidence            999999999999999999999999999999999972    11    12358899999999999999999999976    3


Q ss_pred             C-----------------ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHH
Q 017289          283 G-----------------TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVK  345 (374)
Q Consensus       283 ~-----------------~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~  345 (374)
                      |                 ++|.+|||+++|||+|+||+|+++|+++|++|.++|+|++..+.+|..+..++..++++||+
T Consensus       232 g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~  311 (402)
T PRK08242        232 GFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIMLTGPVPATRKALA  311 (402)
T ss_pred             cccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhcccHHHHHHHHHH
Confidence            4                 69999999999999999999999999999999999999999887887777889999999999


Q ss_pred             HcCCCCCCccEEEecCcchhHHHHhh
Q 017289          346 SAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       346 ~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ++||+++|||++|+||||++++++++
T Consensus       312 ~AGl~~~DID~~ei~daFa~~~l~~~  337 (402)
T PRK08242        312 KAGLTVDDIDLFELNEAFASVVLRFM  337 (402)
T ss_pred             HcCCCHHHCCEEEecchhhHHHHHHH
Confidence            99999999999999999999999876

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=5.4e-59  Score=459.47  Aligned_cols=326  Identities=43%  Similarity=0.592  Sum_probs=278.1

Q ss_pred             CCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCCCcccHHHHHHHHcC
Q 017289           45 PAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG  123 (374)
Q Consensus        45 ~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dA-Gl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~G  123 (374)
                      +..+++|+|||++||||+|.++|.+++.++.||+.+|+++||+|+ |+++++||.+++|+..+....+.+.++.+...+|
T Consensus         2 ~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~G   81 (399)
T PRK09052          2 SKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAG   81 (399)
T ss_pred             CCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcC
Confidence            333468999999999999733678889999999999999999997 9999999999999877654434677888888889


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC-cCCh-hhhhhcccccCCCchHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNP-KVEIFTQARDCLLPMGITSEN  201 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~a~~  201 (374)
                      ++..+|+++|+++|+||+.++..|++.|++|++|+|||+|+|+|++.|+.... .... .+.... .......|++.+++
T Consensus        82 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~  160 (399)
T PRK09052         82 LPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDE-NVGIAYGMGLTAEK  160 (399)
T ss_pred             CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCC-cccccchHHHHHHH
Confidence            97458999999999999999999999999999999999999999988742110 1111 111111 11122479999999


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCC----CCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPK----TGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       202 ~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~----A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      |+++||+|||++|+|+++||+||.+|+.+|+|++||+|+++....|.    ...+++.++..|+.+|+++|+|.|.++||
T Consensus       161 ~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p  240 (399)
T PRK09052        161 VAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP  240 (399)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCC
Confidence            99999999999999999999999999999999999999987632121    00012236789999999999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      +|.++++||.+|||+++|||+++||+|++.|+++|.+|+++|+|++..+.+|..++.+++.|+++||++|||+++|||++
T Consensus       241 ~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~did~~  320 (399)
T PRK09052        241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWI  320 (399)
T ss_pred             ccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCCccchhHHHHHHHHHHHcCCCHHHcCEE
Confidence            99888999999999999999999999999999999999999999999888888777888999999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |+||+|++++++++
T Consensus       321 ei~D~f~~~~l~~~  334 (399)
T PRK09052        321 ELNEAFAAQSLAVI  334 (399)
T ss_pred             EeCcHHHHHHHHHH
Confidence            99999999999875

>PRK09051 beta-ketothiolase; Provisional

Probab=100.00  E-value=6.9e-59  Score=458.32  Aligned_cols=316  Identities=41%  Similarity=0.631  Sum_probs=272.5

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|||||++||||+| ++|.+.+.++.+|+.+|+++||+|+|+++++||.+++|+..+...+..+.++.++..+|++.++
T Consensus         3 ~~v~Ivg~~rtp~g~-~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~   81 (394)
T PRK09051          3 REVVVVSGVRTAIGT-FGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET   81 (394)
T ss_pred             CcEEEEecccCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC
Confidence            589999999999998 4678899999999999999999999999999999999988765432357888888999996568


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc-cc----CcC-Ch-hhhhh---cccccCCCchHHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-VV----GQV-NP-KVEIF---TQARDCLLPMGIT  198 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~-~~----~~~-~~-~~~~~---~~~~~~~~~~~~~  198 (374)
                      |+++|+++|+||+.++..|++.|++|.+|++||+|+|+|++.|+. ..    ... +. .+...   .........|++.
T Consensus        82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (394)
T PRK09051         82 PAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVT  161 (394)
T ss_pred             ceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHH
Confidence            999999999999999999999999999999999999999987741 11    000 10 11100   0010112358999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCc
Q 017289          199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA  278 (374)
Q Consensus       199 a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi  278 (374)
                      +++|+++||+|||++|+|+++||+||.+|+.+|+|++||+|++++.  ++    ..+++++|+.+|+++|+|+|+++||+
T Consensus       162 a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~--~~----~~~~~~~da~~r~~~t~e~v~~~~~v  235 (394)
T PRK09051        162 AENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKT--RK----GEVVFDTDEHVRADTTLEDLAKLKPV  235 (394)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecC--CC----CCeEECCCCCCCCCCCHHHHcCCCCc
Confidence            9999999999999999999999999999999999999999997653  11    12457788888888999999999999


Q ss_pred             ccCC-CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          279 FKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       279 ~~~~-~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      |.++ +|||++|||+++|||+++||+|++.|+++|.+|++||+|++..+.+|.....++..|+++||++|||+++|||++
T Consensus       236 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~~  315 (394)
T PRK09051        236 FKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPEYMGIGPVPATQKALERAGLTVADLDVI  315 (394)
T ss_pred             ccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCCcccccHHHHHHHHHHHcCCCHHHcCEE
Confidence            9765 899999999999999999999999999999999999999999888887777788999999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |+||+|++++++++
T Consensus       316 ei~d~f~~~~~~~~  329 (394)
T PRK09051        316 EANEAFAAQACAVT  329 (394)
T ss_pred             EecCccHHHHHHHH
Confidence            99999999999875

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.5e-59  Score=461.45  Aligned_cols=307  Identities=35%  Similarity=0.484  Sum_probs=267.3

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| +.|.++++++.+|+.+|+++||+|+||++++||.+++|+..+.+. +.++++.++..+|++.++
T Consensus         2 ~~v~Ivg~~rTp~gr-~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~-~~~~a~~~~~~~Gl~~~~   79 (388)
T PRK06366          2 KDVYIVSAKRTAIGK-FGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV-GQNPAGQAAYHAGLPFGV   79 (388)
T ss_pred             CcEEEEEcccCCccc-CCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCc-cCcHHHHHHHHCCCCCCC
Confidence            479999999999998 457788899999999999999999999999999999998865543 457788999999997568


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc--C--c--C----Chhhhhhc--ccc-cC--CC
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G--Q--V----NPKVEIFT--QAR-DC--LL  193 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~--~--~--~----~~~~~~~~--~~~-~~--~~  193 (374)
                      |.++++++|+||+.++..|+++|++|++|+||++|+|+|++.|....  .  .  .    ...+.+..  .+. .+  +.
T Consensus        80 p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  159 (388)
T PRK06366         80 TKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFE  159 (388)
T ss_pred             cceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCc
Confidence            99999999999999999999999999999999999999997664211  0  0  0    00111110  111 11  34


Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHh
Q 017289          194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA  273 (374)
Q Consensus       194 ~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~  273 (374)
                      .|++.+++||++||+|||++++|+++||+||.+|+.+|+|++||+|++.              ++.||.+| ++|+|+|+
T Consensus       160 ~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~--------------~~~d~~~r-~~t~e~~~  224 (388)
T PRK06366        160 HMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFND--------------LDRDEGIR-KTTMEDLA  224 (388)
T ss_pred             cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccc--------------cccccCcc-cCCHHHHh
Confidence            5799999999999999999999999999999999999999999998740              57899999 69999999


Q ss_pred             cCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 017289          274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDD  353 (374)
Q Consensus       274 ~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~D  353 (374)
                      ++||+|+|++++|++|||+++|||+|+||+|+++|++++.+|++||+|++..+.+|.++..+++.|++++|++|||+++|
T Consensus       225 ~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~~~~~~A~~~al~~Agl~~~D  304 (388)
T PRK06366        225 KLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFVEAPIPATRKLLEKQNKSIDY  304 (388)
T ss_pred             hCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhcccHHHHHHHHHHHcCCCHHH
Confidence            99999987788999999999999999999999999999999999999999988888777778899999999999999999


Q ss_pred             ccEEEecCcchhHHHHhhh
Q 017289          354 INLFEINEVLVPIIAANIM  372 (374)
Q Consensus       354 ID~~ei~d~Fa~~~l~~~~  372 (374)
                      ||++|+||+|++++++++-
T Consensus       305 iDv~Ei~daFa~~~l~~le  323 (388)
T PRK06366        305 YDLVEHNEAFSIASIIVRD  323 (388)
T ss_pred             cceeeccchhHHHHHHHHH
Confidence            9999999999999999863

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=100.00  E-value=4.3e-59  Score=458.47  Aligned_cols=316  Identities=39%  Similarity=0.547  Sum_probs=274.5

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      +|+|||++||||+|.++|.+++.++.||+.++++++|++ +|+++++||.+++|++.+.+.++.++++.++...|++..+
T Consensus         1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~   80 (385)
T TIGR02445         1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS   80 (385)
T ss_pred             CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence            489999999999985578899999999999999999995 6999999999999988654433467899988899998779


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCC
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGV  208 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~  208 (374)
                      |+++|+++|+||+.++..|+++|++|++|++|++|+|+|+..|........+.+.+..  ......|++.+++|+++||+
T Consensus        81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~ygi  158 (385)
T TIGR02445        81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHV--AKAAGMMGLTAEMLGKMHGI  158 (385)
T ss_pred             chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhh--ccccchHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999999887532222222222211  11124799999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-CCcccc
Q 017289          209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTTA  287 (374)
Q Consensus       209 t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-~~~lt~  287 (374)
                      |||++|+|+++||+||.+++++|+|++||+|++++..+     .+++++++|+.+|+++|+|+|+++||+|+| ++.||+
T Consensus       159 tre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~-----~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~  233 (385)
T TIGR02445       159 SREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDAD-----GFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTA  233 (385)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCC-----CCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceec
Confidence            99999999999999999999999999999999876321     122467889999999999999999999965 566999


Q ss_pred             CCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHH
Q 017289          288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPII  367 (374)
Q Consensus       288 ~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~  367 (374)
                      +|||+++|||+++||+++++|++++.+|+++|.|++..+.+|..+..++..+++++|+++||+++|||++|+||||++++
T Consensus       234 ~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~~  313 (385)
T TIGR02445       234 GTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQA  313 (385)
T ss_pred             ccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHHH
Confidence            99999999999999999999999999998999999988777766666788999999999999999999999999999999


Q ss_pred             HHhhh
Q 017289          368 AANIM  372 (374)
Q Consensus       368 l~~~~  372 (374)
                      ++++.
T Consensus       314 l~~~e  318 (385)
T TIGR02445       314 LPCLK  318 (385)
T ss_pred             HHHHH
Confidence            99753

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=100.00  E-value=4.8e-59  Score=463.28  Aligned_cols=314  Identities=32%  Similarity=0.504  Sum_probs=274.0

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      .++|||||++||||+| ++|.+.++++.+|+.+++++||+|+||++++||.+++|++.+... +.++++.+++.+|++..
T Consensus         6 ~~~V~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~-~~~~ar~~~l~aGl~~~   83 (430)
T TIGR02446         6 GERIAIVAGLRTPFAR-QATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH   83 (430)
T ss_pred             CCCEEEEecccCcccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCc-cchHHHHHHHhCCCCCC
Confidence            4589999999999998 468889999999999999999999999999999999999876543 46899999999999768


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc-------------CChh--------hhh-h
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VNPK--------VEI-F  185 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-------------~~~~--------~~~-~  185 (374)
                      +|+++|+++|+||+.++..|+++|++|++|++|++|+|+||+.|+.....             ....        +.+ .
T Consensus        84 ~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (430)
T TIGR02446        84 TDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLM  163 (430)
T ss_pred             CchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhc
Confidence            99999999999999999999999999999999999999999877422110             0000        000 0


Q ss_pred             ccc-----ccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEecc
Q 017289          186 TQA-----RDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD  260 (374)
Q Consensus       186 ~~~-----~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d  260 (374)
                      ...     +.....|++.+++|+++||+|||++|+|+++||+|+.+++.+|+|++||+|+++   ||+++     +++.|
T Consensus       164 ~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~---np~a~-----~~~~D  235 (430)
T TIGR02446       164 PVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFP---PPYKQ-----WIAED  235 (430)
T ss_pred             ccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeee---cCCce-----Eeccc
Confidence            000     001235999999999999999999999999999999999999999999999864   78764     48999


Q ss_pred             CCCCCCCCHHHHhcCCCcccC-CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCC-CCCCCCHHH
Q 017289          261 DGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-SVMGIGPAV  338 (374)
Q Consensus       261 ~~~r~~~t~e~~~~~~pi~~~-~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p-~~~~~~~~~  338 (374)
                      |.+|+++|+|+|+++||||+| .++||++|||+++|||+|+||+|+++|++++.+|+++|.+++....++ ..+..++..
T Consensus       236 ~~~r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~~~~~~~  315 (430)
T TIGR02446       236 NNIRHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDMLMGPSY  315 (430)
T ss_pred             CCCCCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhhcccHHH
Confidence            999999999999999999986 589999999999999999999999999999999989999999876666 345667789


Q ss_pred             HHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          339 AIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       339 A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ++++||++|||+++|||++|+||||++++++++
T Consensus       316 a~~~al~~Agl~~~Did~~Ei~daFa~~~l~~~  348 (430)
T TIGR02446       316 ATPLALQRAGLALSDLTLIDMHEAFAAQTLANV  348 (430)
T ss_pred             HHHHHHHHcCCCHHHCCEEEeccccHHHHHHHH
Confidence            999999999999999999999999999999986

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=100.00  E-value=8.3e-59  Score=457.05  Aligned_cols=316  Identities=39%  Similarity=0.568  Sum_probs=274.0

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+|||+++|||+|.+.|.+++..+.+|+.++++++|++ +|+++++||.+++|+..+...++.++++.++..+|++.+
T Consensus         2 ~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~   81 (387)
T PRK08947          2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHS   81 (387)
T ss_pred             CcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCC
Confidence            5799999999999985568889999999999999999995 799999999999998865443346789999999999756


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      +|+++|+++|+||+.++..|+++|++|++|++|++|+|+|+..|........+.+.+..  ......|++.+++||++||
T Consensus        82 ~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~yg  159 (387)
T PRK08947         82 VPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNV--AKAAGMMGLTAEMLGKMHG  159 (387)
T ss_pred             CcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhc--cccchHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999877532222222222211  1112478999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-CCccc
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTT  286 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-~~~lt  286 (374)
                      +|||++++|+++||+||.+|+.+|+|++||+|++++.  .+   ..+.++++|+.+|+++|+|+|+++||+|+| .+.+|
T Consensus       160 isre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~--~~---~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt  234 (387)
T PRK08947        160 ISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHD--AD---GVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVT  234 (387)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecC--CC---CCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEE
Confidence            9999999999999999999999999999999998763  11   112457889999999999999999999965 55699


Q ss_pred             cCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhH
Q 017289          287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPI  366 (374)
Q Consensus       287 ~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~  366 (374)
                      ++|||+++|||+|+||+|++.|++++.+|++||.|++..+.++..+..++..++++||+++||+++|||++|+||||+++
T Consensus       235 ~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~  314 (387)
T PRK08947        235 AGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ  314 (387)
T ss_pred             ccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchHH
Confidence            99999999999999999999999999999889999998877776666678899999999999999999999999999999


Q ss_pred             HHHhh
Q 017289          367 IAANI  371 (374)
Q Consensus       367 ~l~~~  371 (374)
                      +++++
T Consensus       315 ~l~~~  319 (387)
T PRK08947        315 SLPCL  319 (387)
T ss_pred             HHHHH
Confidence            99975

>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]

Probab=100.00  E-value=9.2e-60  Score=428.49  Aligned_cols=356  Identities=72%  Similarity=1.100  Sum_probs=327.5

Q ss_pred             HhHHHHHHHhccCCCCCCCCCCccccccccccccccccCCCCCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHH
Q 017289            4 ALHRQRILLQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLK   83 (374)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~   83 (374)
                      +..||++||.||+||||.    ...+++-|-.+..+.|+      .+|+||++-||+++|.++|.|++..+.+|...+.+
T Consensus         1 ~~er~~~ll~hl~~~s~s----~~~~a~~c~s~~~~~~~------~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~   70 (435)
T KOG1389|consen    1 AMERQQVLLRHLRPSSSS----ASLSASACLSGDSAASA------EDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLR   70 (435)
T ss_pred             CchHHHHHHHhcCCcccc----cccccccccccCccccc------cCEEEEeeccchhhhcccCCcccCChHHHHHHHHH
Confidence            357999999999999876    34567788887776666      58999999999999988899999999999999999


Q ss_pred             HHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEe
Q 017289           84 AVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG  163 (374)
Q Consensus        84 ~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G  163 (374)
                      ..+++.+++|+.|..|++|++...+. +..-.|..+.+.|+|...|..++++.|+||++++..-+..|++|.+|+-|.+|
T Consensus        71 a~ie~t~~dp~~igdi~vG~vL~pg~-ga~e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~G  149 (435)
T KOG1389|consen   71 AVIEKTNLDPSLIGDIVVGTVLAPGS-GASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAG  149 (435)
T ss_pred             HHHhhcCCCHHHhcceeeeeccCCCc-chHHHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccc
Confidence            99999999999999999999987765 44567888899999999999999999999999999999999999999999999


Q ss_pred             eccCCCC-cccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeec
Q 017289          164 LESMTVN-SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNT  242 (374)
Q Consensus       164 ~E~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~  242 (374)
                      +|+|++. |..|.....+....+....+...+||.+.|+.+++||+||+++|++|+.||++|..+...|.|++||+|++.
T Consensus       150 vESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~t  229 (435)
T KOG1389|consen  150 VESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKT  229 (435)
T ss_pred             hhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeee
Confidence            9999986 566666666655555556677889999999999999999999999999999999999999999999999988


Q ss_pred             cccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEE
Q 017289          243 KIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSF  322 (374)
Q Consensus       243 ~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~  322 (374)
                      +..+|+ +-.++++.+.||.+||.+|++.+.+++|+|.++|..|.+|++.++|||+||+|+....|.++|++.+.+...|
T Consensus       230 kv~D~~-g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f  308 (435)
T KOG1389|consen  230 KVVDPK-GDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDF  308 (435)
T ss_pred             eccCCc-CCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeee
Confidence            888998 6778888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          323 SAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       323 ~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ...+.+|..++.+|+.|+.++++.+||..+|||+|||+|+|+.|.+-|.
T Consensus       309 ~~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FEINEAFAsQ~~yc~  357 (435)
T KOG1389|consen  309 AAVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEINEAFASQALYCR  357 (435)
T ss_pred             eeecCCHHHcCCCchhhhHHHHHHcCCcccccceeehhHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999875

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=100.00  E-value=9.1e-59  Score=457.34  Aligned_cols=316  Identities=35%  Similarity=0.492  Sum_probs=275.8

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+|+|++||||+| ++|.+++.++.+|+.++++++|++ +|+++++||.+++|++.+.+.++.++++.+++.+||+.+
T Consensus         2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~   80 (400)
T PRK13359          2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG   80 (400)
T ss_pred             CcEEEEeccCCCccC-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence            379999999999998 678899999999999999999995 699999999999999886654357899999999999867


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc--C-cC--Chh-hhhh-------c--ccccCC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G-QV--NPK-VEIF-------T--QARDCL  192 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~--~-~~--~~~-~~~~-------~--~~~~~~  192 (374)
                      +|+++|+++|+||++|+..|++.|++|++|++|++|+|+||+.|+...  + .+  ... +...       +  .+....
T Consensus        81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (400)
T PRK13359         81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGV  160 (400)
T ss_pred             CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccccccc
Confidence            999999999999999999999999999999999999999999885211  1 11  111 1100       0  011123


Q ss_pred             CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH
Q 017289          193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL  272 (374)
Q Consensus       193 ~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~  272 (374)
                      ..|++++++++++||+|||++|+|+++||+++..+..+|+|++||+|+++..  ++   ...++++.||.+|+ +|+|+|
T Consensus       161 ~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~--~~---~~~~~~~~De~~r~-~t~e~l  234 (400)
T PRK13359        161 DSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQ--KK---GDPLVVSRDEHPRE-TTLEAL  234 (400)
T ss_pred             CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeecc--CC---CCceeecCCCCCCC-CCHHHH
Confidence            4789999999999999999999999999999999999999999999998752  11   11246899999997 999999


Q ss_pred             hcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCC
Q 017289          273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID  352 (374)
Q Consensus       273 ~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~  352 (374)
                      .+++|+|++++++|.+|||+++|||+++||+|+++|+++|.+|++||+|++..+.+|..++.++..++++||+++||+++
T Consensus       235 ~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~al~~AGl~~~  314 (400)
T PRK13359        235 AKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPRVMGIGPAPATQKLLARLGMTLD  314 (400)
T ss_pred             hcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCCccchhHHHHHHHHHHHhCCCHH
Confidence            99999998888999999999999999999999999999999998999999988778887878889999999999999999


Q ss_pred             CccEEEecCcchhHHHHhh
Q 017289          353 DINLFEINEVLVPIIAANI  371 (374)
Q Consensus       353 DID~~ei~d~Fa~~~l~~~  371 (374)
                      |||++|+||+|++++++++
T Consensus       315 DID~iei~dafa~~~l~~~  333 (400)
T PRK13359        315 QFDVIELNEAFASQGLAVL  333 (400)
T ss_pred             HcCcCccCcHhHHHHHHHH
Confidence            9999999999999998875

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.7e-58  Score=457.83  Aligned_cols=316  Identities=37%  Similarity=0.538  Sum_probs=272.3

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||++||||+| +.|.+++.++.||+.+|+++||+|+|+++++||.+++|+..+... ++++++.++..+|++.++
T Consensus         2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~-~~~~a~~va~~~Gl~~~~   79 (404)
T PRK06205          2 RDAVICEPVRTPVGR-FGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE-APAIGRVAALDAGLPVTV   79 (404)
T ss_pred             CceEEEEeecCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCC
Confidence            479999999999998 568889999999999999999999999999999999998876654 467888999999996568


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc-----ccCcC-Ch-hhhhh-----cc---cccCCC
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-----VVGQV-NP-KVEIF-----TQ---ARDCLL  193 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~-----~~~~~-~~-~~~~~-----~~---~~~~~~  193 (374)
                      |+++|+++|+||+.++.+|+++|++|.+|+|||+|+|+|++.+..     ++... .+ .+..+     ..   .+....
T Consensus        80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (404)
T PRK06205         80 PGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPG  159 (404)
T ss_pred             ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCC
Confidence            999999999999999999999999999999999999999976631     11111 11 11110     00   011134


Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHh
Q 017289          194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA  273 (374)
Q Consensus       194 ~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~  273 (374)
                      .|+.++++|+++||+|||++|+|+++||+||.++++.|+|++||+|+++..+     .++++++++|+.+|+++|+|+|+
T Consensus       160 ~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~-----~~~~~~~~~da~~r~~~t~e~~~  234 (404)
T PRK06205        160 GMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQR-----KGDPTVVDRDEHPRADTTLESLA  234 (404)
T ss_pred             CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCC-----CCCceEeccCCCCCCCCCHHHHh
Confidence            5666799999999999999999999999999999999999999999987531     11224678889999999999999


Q ss_pred             cCCCcc---cCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCC
Q 017289          274 KLKPAF---KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQ  350 (374)
Q Consensus       274 ~~~pi~---~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~  350 (374)
                      ++||+|   +|.+++|++|||+++|||+|+||+|+++|++++.+|+++|.|++....+|..+..+++.|+++||++|||+
T Consensus       235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~  314 (404)
T PRK06205        235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSRMGIGPVPATEKALARAGLT  314 (404)
T ss_pred             cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCccccccHHHHHHHHHHHcCCC
Confidence            999999   46689999999999999999999999999999999999999999887777767778899999999999999


Q ss_pred             CCCccEEEecCcchhHHHHhh
Q 017289          351 IDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       351 ~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ++|||++|+||||++++++++
T Consensus       315 ~~Did~~ei~d~f~~~~l~~~  335 (404)
T PRK06205        315 LDDIDLIELNEAFAAQVLAVL  335 (404)
T ss_pred             HHHCCEeeeccHHHHHHHHHH
Confidence            999999999999999999975

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=6.8e-59  Score=456.77  Aligned_cols=316  Identities=34%  Similarity=0.521  Sum_probs=276.0

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      .++|+|||..||||+| ++|.+++.++.+|+.++++++|+|+|+++++||.+++|++.+.+. +.++++.+++.+|++.+
T Consensus         2 ~~~~~iv~~~Rtp~~~-~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~-g~~~~r~~~~~~Gl~~~   79 (392)
T PRK06633          2 TKPVYITHAKRTAFGS-FMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS-GQNPARQTLIHAGIPKE   79 (392)
T ss_pred             CCCEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCcccc-ccHHHHHHHHHCCCCCC
Confidence            4589999999999998 579999999999999999999999999999999999999886653 67889999999999767


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc-c-cC--cC-Chhhhh-----hcccccCCCchHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-V-VG--QV-NPKVEI-----FTQARDCLLPMGI  197 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~-~-~~--~~-~~~~~~-----~~~~~~~~~~~~~  197 (374)
                      +|+++|+++|+||+.++..|++.|++|++|++|++|+|+|+..|.. . ..  .. .....+     ..........|++
T Consensus        80 ~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  159 (392)
T PRK06633         80 VPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGI  159 (392)
T ss_pred             ccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHH
Confidence            9999999999999999999999999999999999999999976531 1 10  00 100000     0101111236899


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      .+++||++||+|||++|+|+++||+||.+|+.+++|++||+|++++..+      ...+++.|+.+|+.+++|.+.+++|
T Consensus       160 ~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~------~~~~~~~d~~~rp~~~~e~l~~l~p  233 (392)
T PRK06633        160 TAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKK------TTSLFDHDETVRPDTSLEILSKLRP  233 (392)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCC------CceeeccCCCCCCCCCHHHHccCCC
Confidence            9999999999999999999999999999999999999999999865211      1146899999999999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      +|++.+|+|++|||+++|||+++||+|+++|++++.+|++||+|++....+|..++.+++.++++||+++||+++|||++
T Consensus       234 ~~~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~  313 (392)
T PRK06633        234 AFDKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPSIMGTAPVPASQKALSKAGWSVNDLEVI  313 (392)
T ss_pred             ccCCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcchhchHHHHHHHHHHHHcCCCHHHcCee
Confidence            99888999999999999999999999999999999999999999999887887777788899999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |+||+|+++++++.
T Consensus       314 ei~dafa~~~l~~~  327 (392)
T PRK06633        314 EVNEAFAAQSIYVN  327 (392)
T ss_pred             ehhhHHHHHHHHHH
Confidence            99999999999875

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=100.00  E-value=9.5e-59  Score=457.22  Aligned_cols=317  Identities=38%  Similarity=0.534  Sum_probs=272.6

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIE-KTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~-dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|||||++||||+| +.|.++++++.+|+.++++++|+ ++|+++++||.+++|++.+.+..+.++++.+++.+|++.+
T Consensus         1 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~   79 (400)
T TIGR02430         1 REAYICDAIRTPIGR-YGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVS   79 (400)
T ss_pred             CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence            369999999999998 46788899999999999999999 5899999999999999875443346899999999999767


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc--C-c---CChhhhhh-------c--ccccCC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G-Q---VNPKVEIF-------T--QARDCL  192 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~--~-~---~~~~~~~~-------~--~~~~~~  192 (374)
                      +|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+...  . .   ....+...       +  .+....
T Consensus        80 ~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (400)
T TIGR02430        80 VPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGV  159 (400)
T ss_pred             CceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccccccccc
Confidence            999999999999999999999999999999999999999998874110  0 0   00001100       0  011123


Q ss_pred             CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH
Q 017289          193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL  272 (374)
Q Consensus       193 ~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~  272 (374)
                      ..|++.+++|+++||+|||++|+|+++||++|.+++.+|+|++||+|+.++.  . .  .+...+++|+.+|+++|+|++
T Consensus       160 ~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~--~-~--~~~~~~n~da~~r~~~t~e~l  234 (400)
T TIGR02430       160 DSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQ--K-K--GEPTVVDQDEHPRPETTLEGL  234 (400)
T ss_pred             CcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEecc--C-C--CCceeeCCCCccCCCCCHHHH
Confidence            4688999999999999999999999999999999999999999999998773  1 1  111246788888888999999


Q ss_pred             hcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCC
Q 017289          273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID  352 (374)
Q Consensus       273 ~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~  352 (374)
                      +++||+|+|++++|++|||+++|||+++||+|+++|++++.+|.+||+|++..+.+|.....++..++++||++|||+++
T Consensus       235 ~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~  314 (400)
T TIGR02430       235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPRIMGIGPVPATQKLLARAGLSID  314 (400)
T ss_pred             hcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccchHHHHHHHHHHHhCCCHH
Confidence            99999998878999999999999999999999999999999888899999987767776777888999999999999999


Q ss_pred             CccEEEecCcchhHHHHhh
Q 017289          353 DINLFEINEVLVPIIAANI  371 (374)
Q Consensus       353 DID~~ei~d~Fa~~~l~~~  371 (374)
                      |||++|+||||++++++++
T Consensus       315 DID~~ei~D~f~~~~l~~~  333 (400)
T TIGR02430       315 QFDVIELNEAFAAQALAVL  333 (400)
T ss_pred             HCCCcccCcHHHHHHHHHH
Confidence            9999999999999999875

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=100.00  E-value=8.7e-59  Score=462.50  Aligned_cols=314  Identities=35%  Similarity=0.521  Sum_probs=271.6

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      .++|||||++||||+| ++|.++++++.||+.+|+++||+|+||++++||.+++|++.+... +.++++.+++.+|++.+
T Consensus         4 ~~~v~Ivg~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~-~~~~ar~~a~~aGl~~~   81 (428)
T PRK08963          4 GDRIAIVSGLRTPFAK-QATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPE-APNIAREIVLGTGMNVH   81 (428)
T ss_pred             CCeEEEEecccCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCC-ccHHHHHHHHHCCCCCC
Confidence            3579999999999998 468889999999999999999999999999999999999765443 57889999999999756


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc-------------CC---hh-----hhh-h
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VN---PK-----VEI-F  185 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-------------~~---~~-----~~~-~  185 (374)
                      +|+++|+++|+||+.++..|+++|++|++|+|||+|+|+||+.|+.+...             ..   +.     +.. .
T Consensus        82 ~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (428)
T PRK08963         82 TDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLL  161 (428)
T ss_pred             CcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhcc
Confidence            99999999999999999999999999999999999999999877421110             00   00     000 0


Q ss_pred             c--c---cccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEecc
Q 017289          186 T--Q---ARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVD  260 (374)
Q Consensus       186 ~--~---~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d  260 (374)
                      +  .   .+.....|++.+++|+++||+|||++++|+++||+||.+|.++|+|++||+|+++   ||+++     +++.|
T Consensus       162 ~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~---~p~a~-----~~~~D  233 (428)
T PRK08963        162 PVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHV---PPYKQ-----PLEED  233 (428)
T ss_pred             ccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEe---cCCce-----eeCCC
Confidence            0  0   0111236899999999999999999999999999999999999999999999986   47663     48899


Q ss_pred             CCCCCCCCHHHHhcCCCcccC-CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC-CCCCCHHH
Q 017289          261 DGIRPNTTIADLAKLKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-VMGIGPAV  338 (374)
Q Consensus       261 ~~~r~~~t~e~~~~~~pi~~~-~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~-~~~~~~~~  338 (374)
                      |.+|+++|+|+|+++||+|+| +++||++|||+++|||+|+||+|+++|++++.+|++||.+++..+.+|. .+..++..
T Consensus       234 ~~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~~~~~~~~~  313 (428)
T PRK08963        234 NNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAY  313 (428)
T ss_pred             CCCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchhhhhhHHHH
Confidence            999999999999999999974 5889999999999999999999999999999999999999998766653 34556789


Q ss_pred             HHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          339 AIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       339 A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ++++||+++||+++|||++|+||||++++++++
T Consensus       314 a~~~al~~AGl~~~DiD~~Ei~d~Fa~~~l~~~  346 (428)
T PRK08963        314 ATPLALERAGLTLADLTLIDMHEAFAAQTLANL  346 (428)
T ss_pred             HHHHHHHHcCCCHHHCCEEEEccccHHHHHHHH
Confidence            999999999999999999999999999999875

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=100.00  E-value=1.3e-58  Score=456.63  Aligned_cols=317  Identities=38%  Similarity=0.540  Sum_probs=274.9

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHH-HcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIE-KTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~-dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+|||++||||+| +.|.+++.++.+|+.++++++|+ ++|+++++||.+++|++.+.+..+.++++.+++.+|++.+
T Consensus         2 ~~V~Ivg~~rTpfgk-~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~   80 (401)
T PRK09050          2 TEAFICDAIRTPIGR-YGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVS   80 (401)
T ss_pred             CcEEEEecccCCccc-CCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence            479999999999998 46788899999999999999999 5899999999999999876543347899999999999767


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc--C-cC--Chh-hhhh-------c--ccccCC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--G-QV--NPK-VEIF-------T--QARDCL  192 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~--~-~~--~~~-~~~~-------~--~~~~~~  192 (374)
                      +|+++|+++|+||+.|+..|+++|++|++|++|++|+|+||+.|+...  . .+  ... +...       +  ......
T Consensus        81 vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (401)
T PRK09050         81 VPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGV  160 (401)
T ss_pred             CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCcccccccc
Confidence            999999999999999999999999999999999999999998874110  0 00  000 1100       0  011123


Q ss_pred             CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH
Q 017289          193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL  272 (374)
Q Consensus       193 ~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~  272 (374)
                      ..|++.+++|+++||+|||++|+||..||+|+.++..+|+|++||+|+++..  ++   .+++++++|+.+|+++|+|+|
T Consensus       161 ~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~--~~---~~~~~~~~da~~r~~~t~e~l  235 (401)
T PRK09050        161 DSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQ--KK---GDPVVVDRDEHPRPETTLEAL  235 (401)
T ss_pred             ccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecc--CC---CCceeeCCCCCCCCCCCHHHH
Confidence            4688999999999999999999999999999999999999999999998763  21   122468889999999999999


Q ss_pred             hcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCC
Q 017289          273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID  352 (374)
Q Consensus       273 ~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~  352 (374)
                      +++||+|.+++++|++|||+++|||+|+||+|+++|++++.+|++||+|++..+.+|.....++..++++||++|||+++
T Consensus       236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~  315 (401)
T PRK09050        236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPRIMGIGPAPATRKLLARLGLTID  315 (401)
T ss_pred             hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHH
Confidence            99999998888999999999999999999999999999999999999999988777776777889999999999999999


Q ss_pred             CccEEEecCcchhHHHHhh
Q 017289          353 DINLFEINEVLVPIIAANI  371 (374)
Q Consensus       353 DID~~ei~d~Fa~~~l~~~  371 (374)
                      |||++|+||||++++++++
T Consensus       316 DId~~ei~D~f~~~~l~~~  334 (401)
T PRK09050        316 QFDVIELNEAFAAQGLAVL  334 (401)
T ss_pred             HCCccccCcHhHHHHHHHH
Confidence            9999999999999999865

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.1e-58  Score=454.54  Aligned_cols=320  Identities=43%  Similarity=0.629  Sum_probs=275.4

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|||||+++|||+|.+++.++++++.||+.+|+++||+|+|+.+++||.+++|++.+...++.++++.++..+|++.++
T Consensus         2 ~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~   81 (391)
T PRK07661          2 REAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV   81 (391)
T ss_pred             CcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc
Confidence            47999999999999854678889999999999999999999987899999999988765443467888899999996459


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC-cCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      |+++|+++|+||+.++..|++.|++|.+|++||+|+|+|++.|+.... .....+.+.  .......|++.+++|+++||
T Consensus        82 p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~--~~~~~~~m~~~a~~~~~~~g  159 (391)
T PRK07661         82 PAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEA--APEYYMGMGHTAEQVAVKYG  159 (391)
T ss_pred             ceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCcccccc--ccchhhhHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999987742110 001111110  11112347999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeecccc----CCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIV----DPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~----nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      +|||++++|+++||+||..|+.+|+|++||+|+++...    +++++. ...+++.||.+|+++|+|.+.+++|+|.+.+
T Consensus       160 ~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~-~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g  238 (391)
T PRK07661        160 ISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQE-ETITFSQDEGVRADTTLEILGKLRPAFNVKG  238 (391)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccc-cceeEecCCCCCCCCCHHHHhcCCCCcCCCC
Confidence            99999999999999999999999999999999987631    122221 1257899999999999999999999997789


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcc
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL  363 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~F  363 (374)
                      |||++|||+++|||+|+||+|+++|+++|.+|++||+|++..+.+|..+..++..++++||++|||+++|||++|+||+|
T Consensus       239 ~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f  318 (391)
T PRK07661        239 SVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAF  318 (391)
T ss_pred             CEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHH
Confidence            99999999999999999999999999999999999999999888887777788899999999999999999999999999


Q ss_pred             hhHHHHhh
Q 017289          364 VPIIAANI  371 (374)
Q Consensus       364 a~~~l~~~  371 (374)
                      ++++++++
T Consensus       319 ~~~~l~~~  326 (391)
T PRK07661        319 ASQSIQVI  326 (391)
T ss_pred             HHHHHHHH
Confidence            99999975

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.4e-58  Score=456.24  Aligned_cols=316  Identities=36%  Similarity=0.504  Sum_probs=271.7

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||++||||+| ++|.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+.+. +.++++.++..+|++.++
T Consensus         2 ~~v~Ivg~~rTpfg~-~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~Gl~~~~   79 (393)
T PRK08235          2 SKTVIVSAARTPFGK-FGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQ-GQIPSRQAARAAGIPWEV   79 (393)
T ss_pred             CcEEEEecCcCCccC-CCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCC-CCCHHHHHHHHcCCCCCc
Confidence            479999999999998 567888999999999999999999999999999999998876432 567888889999996579


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc-----CcC-Chhhhh----hc-ccccCCCchHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQV-NPKVEI----FT-QARDCLLPMGI  197 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~-----~~~-~~~~~~----~~-~~~~~~~~~~~  197 (374)
                      |+++|+++|+||..++..|++.|++|.+|+|||+|+|+|++.|+...     ... ++.+.+    .. ........|++
T Consensus        80 p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (393)
T PRK08235         80 QTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGV  159 (393)
T ss_pred             ceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHH
Confidence            99999999999999999999999999999999999999998774211     001 110110    00 01011246899


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      ++++|+++||+|||++|+|+++||+||.+|+.+|+|++||+|+++..+  +   .+++++++|+.+|+++|+|+|+++||
T Consensus       160 ~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~--~---~~~~~~~~da~~r~~~t~e~~~~~~~  234 (393)
T PRK08235        160 YGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQR--K---GDPIVVAKDEAPRKDTTIEKLAKLKP  234 (393)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCC--C---CCceEeCCCCCCCCCCCHHHHhcCCC
Confidence            999999999999999999999999999999999999999999987531  1   11245778888898999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      +|+|+|++|++|||+++|||+|+||+|++.|++++.+|+++|.|++....++..+..++..++++||+++||+++|||++
T Consensus       235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~  314 (393)
T PRK08235        235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKDFPRTPGYAINALLEKTGKTVEDIDLF  314 (393)
T ss_pred             cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhhhcchHHHHHHHHHHHhCCCHHHCCee
Confidence            99888899999999999999999999999999999999999999887666666666677899999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |+||||++++++++
T Consensus       315 e~~d~f~~~~l~~~  328 (393)
T PRK08235        315 EINEAFAAVALAST  328 (393)
T ss_pred             hhcchhHHHHHHHH
Confidence            99999999999875

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4.2e-58  Score=452.50  Aligned_cols=321  Identities=41%  Similarity=0.643  Sum_probs=282.3

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|||||+++|||+|++.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+....+.++++.++..+|++.++
T Consensus         2 ~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~   81 (392)
T PRK07108          2 TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV   81 (392)
T ss_pred             CcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC
Confidence            47999999999999865677889999999999999999999999999999999998876543457999999999997569


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcC-ChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-NPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      |+++|+++|+||+.++..|+++|++|++|++|++|+|+||+.|....... ...+.. ......+..|+.+++.++.+|+
T Consensus        82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~-~~~~~~~~~m~~~ae~~a~~~~  160 (392)
T PRK07108         82 PGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLV-EHKPEIYWSMLQTAENVAKRYG  160 (392)
T ss_pred             ceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhh-ccCCccccCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999998775322110 011110 0001112357888899999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeecc--ccCCCCC--cccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTK--IVDPKTG--VEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~--~~nP~A~--~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      ++||++++|+..+|++|..+.++|+|++||+|++..  ..||+++  ++++++++.||.+|+++|+|+|.+++|+| +.+
T Consensus       161 i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~-~~g  239 (392)
T PRK07108        161 ISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL-PGG  239 (392)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC-CCC
Confidence            999999999999999999999999999999999754  4589887  67778899999999999999999999998 569


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcc
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL  363 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~F  363 (374)
                      |+|.+|||+++|||+|+||+|+++|++++.+|+++|+|++..+.+|..+..+++.|+++||+++||+++|||++|+||+|
T Consensus       240 ~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eaf  319 (392)
T PRK07108        240 VITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAF  319 (392)
T ss_pred             CCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHH
Confidence            99999999999999999999999999999999999999999888888777788999999999999999999999999999


Q ss_pred             hhHHHHhh
Q 017289          364 VPIIAANI  371 (374)
Q Consensus       364 a~~~l~~~  371 (374)
                      ++++++++
T Consensus       320 a~~~l~~~  327 (392)
T PRK07108        320 AVQVLYCR  327 (392)
T ss_pred             HHHHHHHH
Confidence            99999875

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=5.7e-58  Score=452.15  Aligned_cols=317  Identities=35%  Similarity=0.514  Sum_probs=273.5

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|||||++||||+| +.|.++++++.+|+.+|+++||+|+|+++++||.+++|++.+.+..+.++++.++..+|++.++
T Consensus         2 ~~v~Iv~~~rTpfgk-~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~   80 (401)
T PRK08131          2 LDAYIYDGLRSPFGR-HAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV   80 (401)
T ss_pred             CcEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence            379999999999998 4678889999999999999999999999999999999998765543568899999999997679


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc---Cc--CC-hhhhhhc-----cc-c---cCCC
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV---GQ--VN-PKVEIFT-----QA-R---DCLL  193 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~---~~--~~-~~~~~~~-----~~-~---~~~~  193 (374)
                      |+++|+++|+||+.++..|+++|++|++|++|++|+|+|+..|....   ..  .. ..|....     .. .   ....
T Consensus        81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  160 (401)
T PRK08131         81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGND  160 (401)
T ss_pred             ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccC
Confidence            99999999999999999999999999999999999999998775210   00  01 1122110     00 0   1234


Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHh
Q 017289          194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA  273 (374)
Q Consensus       194 ~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~  273 (374)
                      .|++.+++|+++||+|||++|+|+++||+++..+..+++|++|++|+++... ++.   +...+..||.+|+++|+|.|.
T Consensus       161 ~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~-~~~---~~~~v~~De~~r~~~~~e~L~  236 (401)
T PRK08131        161 SMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQG-RKL---PPKLVAEDEHPRPSSTVEALT  236 (401)
T ss_pred             CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccc-cCC---CceEEecCCCCCCCCCHHHHh
Confidence            6889999999999999999999999999999999999999999999976420 110   012588999999999999999


Q ss_pred             cCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 017289          274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDD  353 (374)
Q Consensus       274 ~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~D  353 (374)
                      ++||+| +++++|++|||+++|||+|+||+|+++|++++.+|+++|+|++..+.+|..+..++..++++||+++||+++|
T Consensus       237 ~l~p~f-~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~d  315 (401)
T PRK08131        237 KLKPLF-EGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPRIMGIGPVEAIKKALARAGLTLDD  315 (401)
T ss_pred             cCCCCC-CCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCccccchHHHHHHHHHHHcCCCHHH
Confidence            999999 5589999999999999999999999999999999999999999988777777778899999999999999999


Q ss_pred             ccEEEecCcchhHHHHhh
Q 017289          354 INLFEINEVLVPIIAANI  371 (374)
Q Consensus       354 ID~~ei~d~Fa~~~l~~~  371 (374)
                      ||++|+||||++++++++
T Consensus       316 id~~ei~d~Fa~~~l~~~  333 (401)
T PRK08131        316 MDIIEINEAFASQVLGCL  333 (401)
T ss_pred             CCeehhccHHHHHHHHHH
Confidence            999999999999999864

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.5e-57  Score=453.72  Aligned_cols=314  Identities=35%  Similarity=0.535  Sum_probs=267.8

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      |+++|+|||+++|||+| +.|.++++++.+|+.+|+++||+|+|+++++||.+++|+..+... ..++++.++..+|++.
T Consensus         1 ~~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~~   78 (426)
T PRK08170          1 MARPVYIVDGARTPFLK-ARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPD-EANIARVVALRLGCGE   78 (426)
T ss_pred             CCCcEEEEecCCCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cChHHHHHHHHhCcCC
Confidence            35689999999999998 356677899999999999999999999999999999998765432 3578899999999964


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC-------c----------CC------hhhh
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-------Q----------VN------PKVE  183 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~-------~----------~~------~~~~  183 (374)
                      ++|+++++++|+||..++..|+++|++|.+|+||++|+|+|+..|+....       .          ..      ..+.
T Consensus        79 ~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (426)
T PRK08170         79 KVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYL  158 (426)
T ss_pred             CceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccccc
Confidence            68999999999999999999999999999999999999999886641100       0          00      0011


Q ss_pred             hhc----ccc-cC--CCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceE
Q 017289          184 IFT----QAR-DC--LLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT  256 (374)
Q Consensus       184 ~~~----~~~-~~--~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~  256 (374)
                      .+.    .+. .+  ...|++.+++||++||+|||++++|+++||+||..+.+.|+|+ ||+|++.+..||         
T Consensus       159 ~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~-~i~pv~~~~~np---------  228 (426)
T PRK08170        159 APVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLK-EVVPLFDRDGKF---------  228 (426)
T ss_pred             ccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcc-eEeeeecCCCCe---------
Confidence            100    111 11  1379999999999999999999999999999999998889998 999997432244         


Q ss_pred             EeccCCCCCCCCHHHHhcCCCccc-CCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCC
Q 017289          257 ISVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIG  335 (374)
Q Consensus       257 ~~~d~~~r~~~t~e~~~~~~pi~~-~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~  335 (374)
                      +..||.+|+++|+|+|+++||+|+ |.+++|++|||+++|||+|+||+|+++|++++.+|+++|.+++....+|..+..+
T Consensus       229 ~a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~~~~~~  308 (426)
T PRK08170        229 YDHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPSQMGLG  308 (426)
T ss_pred             eccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCchhhccc
Confidence            456889998999999999999997 5678999999999999999999999999999999999999999887788777778


Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhhh
Q 017289          336 PAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIM  372 (374)
Q Consensus       336 ~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~~  372 (374)
                      ++.|+++||++|||+++|||++|+||||+++++++++
T Consensus       309 ~~~a~~~al~~aGl~~~did~~ei~daFa~~~l~~l~  345 (426)
T PRK08170        309 PVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLA  345 (426)
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEecchhHHHHHHHHH
Confidence            8899999999999999999999999999999998764

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4e-57  Score=443.51  Aligned_cols=315  Identities=33%  Similarity=0.445  Sum_probs=277.9

Q ss_pred             CceEEEeeeccccc--ccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           49 DDVVIVAAYRTAIC--KAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        49 ~~v~IvG~g~tpf~--~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      ++||||+..||||+  |.++|.+++.++.+|+..+++++|+++|+++++||.|++|++.+.+.++.|++|++++..|||.
T Consensus         2 ~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~   81 (417)
T PRK06025          2 AEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDI   81 (417)
T ss_pred             CceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCC
Confidence            37999999999998  7447999999999999999999999999999999999999998766546799999999999999


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc---C-cCChhhhhh----cccccCCCchHHH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV---G-QVNPKVEIF----TQARDCLLPMGIT  198 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~---~-~~~~~~~~~----~~~~~~~~~~~~~  198 (374)
                      .+|+++|++.|+||+++|..|+++|++|++|++|++|+|+||+.|+...   . .....+.+.    .........|+.+
T Consensus        82 ~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~  161 (417)
T PRK06025         82 KASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVC  161 (417)
T ss_pred             CCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHH
Confidence            9999999999999999999999999999999999999999999996211   1 111111111    0111123579999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCc
Q 017289          199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA  278 (374)
Q Consensus       199 a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi  278 (374)
                      +|+++++||+|||++|+||++||++|.+++.+|+|++||+|++.    ++    ...+++.||.+|+++|+|.|.++||+
T Consensus       162 ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~----~~----~~~~~~~De~~R~~~t~e~la~L~p~  233 (417)
T PRK06025        162 GDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYR----DD----GSVALDHEEFPRPQTTAEGLAALKPA  233 (417)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEc----CC----CCEEecCCCCCCCCCCHHHHcCCCCC
Confidence            99999999999999999999999999999999999999999972    11    12468999999999999999999999


Q ss_pred             cc--------CCCc------------------cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCC
Q 017289          279 FK--------KDGT------------------TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM  332 (374)
Q Consensus       279 ~~--------~~~~------------------lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~  332 (374)
                      |.        ++|.                  +|.+|||+++|||+|+||+|+++|++++.+|.++|.|++..+.+|..+
T Consensus       234 F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~  313 (417)
T PRK06025        234 FTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLM  313 (417)
T ss_pred             ccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhh
Confidence            96        3677                  899999999999999999999999999999999999999988888877


Q ss_pred             CCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          333 GIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       333 ~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ..++..+++++|+++|++++|||+||+||+|+.+++.++
T Consensus       314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~l~~~  352 (417)
T PRK06025        314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVAEKFI  352 (417)
T ss_pred             cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHHHHHH
Confidence            788899999999999999999999999999999988764

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.5e-57  Score=448.22  Aligned_cols=315  Identities=38%  Similarity=0.591  Sum_probs=268.3

Q ss_pred             CceEEEeeecccccccC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcC
Q 017289           49 DDVVIVAAYRTAICKAK-----RGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG  123 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~-----~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~G  123 (374)
                      ++|+|||+++|||+|..     +|.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+......+.++......+
T Consensus         2 ~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~   81 (394)
T PRK06445          2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLAR   81 (394)
T ss_pred             CcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcC
Confidence            47999999999999843     4889999999999999999999999999999999999887643223456776666667


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC------cC--ChhhhhhcccccCCCch
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG------QV--NPKVEIFTQARDCLLPM  195 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~------~~--~~~~~~~~~~~~~~~~~  195 (374)
                      ++.++|+++|+++|+||..++.+|+++|++|.+|++|++|+|+|++.|+....      ..  ++.+..  ........|
T Consensus        82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  159 (394)
T PRK06445         82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIE--YDLTTGYVM  159 (394)
T ss_pred             CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCc--ccccCCCCH
Confidence            76578999999999999999999999999999999999999999977642100      00  111110  111122359


Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcC
Q 017289          196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL  275 (374)
Q Consensus       196 ~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~  275 (374)
                      ++.+++||++||+|||++++|+++||+||.+++.+|+|++||+|+++.    +.+  .+.++++|+.+|+++|+|+|+++
T Consensus       160 a~~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~----~~~--~~~~~npda~~r~~~t~e~~~~~  233 (394)
T PRK06445        160 GLTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVE----VEG--KKKVVDVDQSVRPDTSLEKLAKL  233 (394)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEec----CCC--CceeeCCCCCCCCCCCHHHHhcC
Confidence            999999999999999999999999999999999999999999999763    111  11345677777888999999999


Q ss_pred             CCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 017289          276 KPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN  355 (374)
Q Consensus       276 ~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID  355 (374)
                      +|+|+++||||++|||+++|||+++||+|++.|++++.+|++||.|++....+|...+.++..++++||+++||+++|||
T Consensus       234 ~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId  313 (394)
T PRK06445        234 PPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPAIMGKGPVPASKKALEKAGLSVKDID  313 (394)
T ss_pred             CCccCCCCcEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCchhcchHHHHHHHHHHHcCCCHHHcC
Confidence            99998778999999999999999999999999999999999999999998877777777889999999999999999999


Q ss_pred             EEEecCcchhHHHHhh
Q 017289          356 LFEINEVLVPIIAANI  371 (374)
Q Consensus       356 ~~ei~d~Fa~~~l~~~  371 (374)
                      ++|+||||++++++++
T Consensus       314 ~~e~~d~f~~~~l~~~  329 (394)
T PRK06445        314 LWEINEAFAVVVLYAI  329 (394)
T ss_pred             EEEecccchHHHHHHH
Confidence            9999999999999875

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4.8e-57  Score=445.85  Aligned_cols=316  Identities=39%  Similarity=0.600  Sum_probs=273.8

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| ++|.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... +.++++.++..+|++..+
T Consensus         2 ~~v~Ivg~~rTpfgk-~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~-~~~~a~~va~~lGl~~~~   79 (393)
T PRK05656          2 QDVVIVAATRTAIGS-FQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA-GQNPARQAAIKAGLPHSV   79 (393)
T ss_pred             CcEEEEEcccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCC-CCcHHHHHHHHcCCCCCc
Confidence            479999999999998 467889999999999999999999999999999999998875433 567889999999997448


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC-----cC-Ch-hhhhh----cccccCCCchHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-----QV-NP-KVEIF----TQARDCLLPMGI  197 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~-----~~-~~-~~~~~----~~~~~~~~~~~~  197 (374)
                      |+++|+++|+||+.++..|++.|++|.+|++||+|+|+|+..|+....     .+ .. .+...    .........|++
T Consensus        80 p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  159 (393)
T PRK05656         80 PAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGI  159 (393)
T ss_pred             ceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHH
Confidence            999999999999999999999999999999999999999987752110     00 00 01000    001011246999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      .+++||++||+|||++|+|+++||+|+.+|+.+++|++||+|+++....     .++.+++.||.+|+++|+|.+.++||
T Consensus       160 ~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~-----~~~~~~~~D~~~r~~~~~e~l~~l~p  234 (393)
T PRK05656        160 TAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRK-----GEPLAFATDEQPRAGTTAESLAKLKP  234 (393)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCC-----CCceEeccCCCCCCCCCHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999765211     22346889999999999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      +|.+++++|++|||+++|||+++||+|+++|+++|.+|++||+|++....+|...+.++..++++||+++||+++|||++
T Consensus       235 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~~  314 (393)
T PRK05656        235 AFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGVDPAIMGIGPVSATRRCLDKAGWSLAELDLI  314 (393)
T ss_pred             CcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCCcccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence            99777889999999999999999999999999999999999999998887887777788999999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |+||+|++++++++
T Consensus       315 e~~d~f~~~~~~~~  328 (393)
T PRK05656        315 EANEAFAAQSLAVG  328 (393)
T ss_pred             EecCccHHHHHHHH
Confidence            99999999998875

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.5e-56  Score=445.38  Aligned_cols=311  Identities=30%  Similarity=0.501  Sum_probs=262.1

Q ss_pred             CCCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcC
Q 017289           44 KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG  123 (374)
Q Consensus        44 m~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~G  123 (374)
                      |+.| ++|+|||+++|||+| +.|.+.+.++.||+.+|++++|+|+|+++++||.+++|++.+... +.++++.++...|
T Consensus         3 ~~~m-~~V~Ivg~~rTpfg~-~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~-~~~~~r~~~l~~g   79 (427)
T PRK09268          3 MPTV-RRVAILGGNRIPFAR-SNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSR-DFNLTRECVLGSA   79 (427)
T ss_pred             CCCC-CCEEEEecCcCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCc-cccHHHHHHHHcC
Confidence            4544 679999999999998 467788999999999999999999999999999999999876432 4678999888888


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc-------------CC----------h
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-------------VN----------P  180 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-------------~~----------~  180 (374)
                      ++..+|+++|+++|+||+.++..|++.|++|.+|++||+|+|+||+.|+.....             ..          +
T Consensus        80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (427)
T PRK09268         80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRP  159 (427)
T ss_pred             CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccc
Confidence            865799999999999999999999999999999999999999999877532110             00          0


Q ss_pred             hhhhh--cccc--cCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceE
Q 017289          181 KVEIF--TQAR--DCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVT  256 (374)
Q Consensus       181 ~~~~~--~~~~--~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~  256 (374)
                      .+...  +...  .....|+.++++||++||+|||++|+|+++||+||.+++.+|+|++||        ||+++      
T Consensus       160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~ei--------nP~~~------  225 (427)
T PRK09268        160 KHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLI--------TPFLG------  225 (427)
T ss_pred             ccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccc--------cCccC------
Confidence            00000  0110  112359999999999999999999999999999999999999999999        55532      


Q ss_pred             EeccCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCC----C
Q 017289          257 ISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP----S  330 (374)
Q Consensus       257 ~~~d~~~r~~~t~e~~~~~~pi~~~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p----~  330 (374)
                      ++.|+.+|+++|+|+|+++||+|+|  +|+||++|||+++|||+|+||+|+++|++++.+|+++|..+.....+|    .
T Consensus       226 ~~~D~~~r~~~t~e~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~~  305 (427)
T PRK09268        226 LTRDNNLRPDSSLEKLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKE  305 (427)
T ss_pred             cccCCCCCCCCCHHHHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccccc
Confidence            6789999999999999999999976  577999999999999999999999999999999986764444334444    3


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          331 VMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       331 ~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ++..++..++++||++|||+++|||++|+||||++++++++
T Consensus       306 ~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~~l~~l  346 (427)
T PRK09268        306 GLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATL  346 (427)
T ss_pred             hhhccHHHHHHHHHHHcCCCHHHCCEEEeccccHHHHHHHH
Confidence            35567789999999999999999999999999999988876

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=9.6e-56  Score=436.91  Aligned_cols=317  Identities=33%  Similarity=0.447  Sum_probs=271.3

Q ss_pred             CCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCC
Q 017289           46 AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP  125 (374)
Q Consensus        46 ~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~  125 (374)
                      .+.++|+|||+++|||+| ++|.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+.+. +.++++..++.+|++
T Consensus         4 ~~~~~V~Ivg~~rTpf~k-~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~-~~~~~~~~~l~ag~~   81 (397)
T PRK06954          4 VDQDPIVIASAARTPMAA-FQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQ-GQAPARQAALGAGLP   81 (397)
T ss_pred             CCCCCEEEEecccCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCcc-chHHHHHHHHcCCCC
Confidence            366789999999999998 467889999999999999999999999999999999998875543 557778888889997


Q ss_pred             CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC---c--C-Chh-hh----hhc-ccccCCC
Q 017289          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG---Q--V-NPK-VE----IFT-QARDCLL  193 (374)
Q Consensus       126 ~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~---~--~-~~~-~~----~~~-~~~~~~~  193 (374)
                      .++|+++|+++|+||+.++..|+++|++|++|++|++|+|+|++.|+....   .  + ... +.    +.. ..+....
T Consensus        82 ~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (397)
T PRK06954         82 LSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGR  161 (397)
T ss_pred             CCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCC
Confidence            669999999999999999999999999999999999999999976642110   0  0 000 11    110 1111235


Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHh
Q 017289          194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA  273 (374)
Q Consensus       194 ~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~  273 (374)
                      .|++++++|+++||+|||++|+|+++||+|+.++...++|+++++|+++..  ..    +..+++.||.+| ++++|.+.
T Consensus       162 ~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~--~~----~~~~v~~D~~pr-~~~~~~l~  234 (397)
T PRK06954        162 LMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAG--KK----GDTVIDRDEQPF-KANPEKIP  234 (397)
T ss_pred             CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEecc--CC----CCeEeccCCCcC-CCCHHHHh
Confidence            789999999999999999999999999999999878889999999997652  11    113588999999 49999999


Q ss_pred             cCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 017289          274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDD  353 (374)
Q Consensus       274 ~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~D  353 (374)
                      +++|+|+++|+||++|||+++|||+|+||+|+++|++++.+|+++|+|++....+|..+..++..++++||+++||+++|
T Consensus       235 ~l~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~D  314 (397)
T PRK06954        235 TLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSKFTTAPVGAIRKLFEKNGWRAAE  314 (397)
T ss_pred             CCCCccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcccccchHHHHHHHHHHHcCCCHHH
Confidence            99999998899999999999999999999999999999999999999988776677667778899999999999999999


Q ss_pred             ccEEEecCcchhHHHHhh
Q 017289          354 INLFEINEVLVPIIAANI  371 (374)
Q Consensus       354 ID~~ei~d~Fa~~~l~~~  371 (374)
                      ||++|+||+|++++++++
T Consensus       315 id~~ei~d~fa~~~l~~~  332 (397)
T PRK06954        315 VDLFEINEAFAVVTMAAM  332 (397)
T ss_pred             CCEEehhhHHHHHHHHHH
Confidence            999999999999999875

>PRK05790 putative acyltransferase; Provisional

Probab=100.00  E-value=2.6e-55  Score=434.44  Aligned_cols=316  Identities=43%  Similarity=0.611  Sum_probs=270.2

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| ..|.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... +.++++.+...+|++.+.
T Consensus         2 ~~v~IvG~~~tp~~r-~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~-~~~~~~~~~~~~gl~~~~   79 (393)
T PRK05790          2 KDVVIVSAARTPIGK-FGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA-GQNPARQAALKAGLPVEV   79 (393)
T ss_pred             CceEEEeeecCCccC-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCC-CCcHHHHHHHHcCCCCCC
Confidence            479999999999998 356778899999999999999999999999999999998765432 456777788888996457


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc-----cCcCC-hhhhh---h--cccccCCCchHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVN-PKVEI---F--TQARDCLLPMGI  197 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~-~~~~~---~--~~~~~~~~~~~~  197 (374)
                      |+++++++|+||..++..|+++|++|.+|+|||+|+|+|+..|...     +.... +...+   .  .........|++
T Consensus        80 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  159 (393)
T PRK05790         80 PALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGI  159 (393)
T ss_pred             ceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHH
Confidence            9999999999999999999999999999999999999998876421     10110 00100   0  011111346999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      .+++||++||+|||++++|++++|+||.+|+++|+|++||+|+.+..     ..+++++++.|+.+|+++++|+|.+++|
T Consensus       160 ~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~-----~~~~~~~~~~d~~~~~~~~~e~l~~~~~  234 (393)
T PRK05790        160 TAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQ-----RKGDPVVVDTDEHPRPDTTAESLAKLRP  234 (393)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecC-----CCCCceEecCCCCCCCCCCHHHHhCCCC
Confidence            99999999999999999999999999999999999999999986542     1133456799999999999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      +|++.+++|++|||+++|||+++||+|+++|++++.+|+++|.|++....+|.....++..++++||++||++++|||++
T Consensus       235 v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~  314 (393)
T PRK05790        235 AFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPAIMGIGPVPAIRKALEKAGWSLADLDLI  314 (393)
T ss_pred             ccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCCccchhHHHHHHHHHHHcCCCHHHCCEE
Confidence            99888999999999999999999999999999999999999999998877776666677899999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |+||+|++++++++
T Consensus       315 e~~d~f~~~~l~~~  328 (393)
T PRK05790        315 EINEAFAAQALAVE  328 (393)
T ss_pred             EeCcHHHHHHHHHH
Confidence            99999999998875

>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=100.00  E-value=4.5e-56  Score=405.82  Aligned_cols=320  Identities=37%  Similarity=0.526  Sum_probs=288.3

Q ss_pred             CCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCC
Q 017289           45 PAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF  124 (374)
Q Consensus        45 ~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl  124 (374)
                      ..++++|+||++.|||+|- |+|.+..++..+|+.-|++.||+++++++.+++.+++|++.+... +.+++|+.++..||
T Consensus         2 ~~~~k~V~IVsaARTPIGs-F~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl-GQapaRQaalgAGl   79 (396)
T KOG1390|consen    2 SLSSKDVFIVSAARTPIGS-FRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL-GQAPARQAALGAGL   79 (396)
T ss_pred             CCCCCceEEEeeccccccc-cccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc-CcchHHHHHhhcCC
Confidence            4456799999999999995 789999999999999999999999999999999999999988775 78999999999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc----cCcC------ChhhhhhcccccCCCc
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV----VGQV------NPKVEIFTQARDCLLP  194 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~----~~~~------~~~~~~~~~~~~~~~~  194 (374)
                      |...++++|+..|+||+.++..|++.|+.|..|+|+++|.|+||..|+..    +..+      +....|-..+......
T Consensus        80 p~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~  159 (396)
T KOG1390|consen   80 PYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDKCH  159 (396)
T ss_pred             CcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhccCC
Confidence            99999999999999999999999999999999999999999999999521    1111      1111111122223468


Q ss_pred             hHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhc
Q 017289          195 MGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK  274 (374)
Q Consensus       195 ~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~  274 (374)
                      ||.++|+.+++|+||||++|.||+.|++++..++++|.|.+||+|++++.      .|...+++.||.+++..+.+++.+
T Consensus       160 MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~------~rg~~~v~~DEe~~k~~~~~~~~~  233 (396)
T KOG1390|consen  160 MGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKT------KRGETVVKKDEEPKKGSNIEKLSK  233 (396)
T ss_pred             cchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEec------CCCcEEeccchhhhcccchhhhcc
Confidence            99999999999999999999999999999999999999999999999984      333568999999998899999999


Q ss_pred             CCCcccC-CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 017289          275 LKPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDD  353 (374)
Q Consensus       275 ~~pi~~~-~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~D  353 (374)
                      +||+|.. .+++|..|.+.++|||+|+||+|++.++++|++|+++|++|+.++.+|.++..+|..+++++|++||+..+|
T Consensus       234 l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP~laipk~lk~aG~~~sd  313 (396)
T KOG1390|consen  234 LRPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAPALAIPKALKKAGLEQSD  313 (396)
T ss_pred             ccceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccchHHHHHHHHHHcCcchhh
Confidence            9999965 478999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccEEEecCcchhHHHHhhh
Q 017289          354 INLFEINEVLVPIIAANIM  372 (374)
Q Consensus       354 ID~~ei~d~Fa~~~l~~~~  372 (374)
                      ||+||++|+|+.++|++++
T Consensus       314 Vd~~EiNEAFs~v~lA~iK  332 (396)
T KOG1390|consen  314 VDYWEINEAFSVVVLANIK  332 (396)
T ss_pred             hhHHhhhhhhhHHHHHHHH
Confidence            9999999999999999864

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=100.00  E-value=6e-54  Score=423.73  Aligned_cols=312  Identities=49%  Similarity=0.701  Sum_probs=265.0

Q ss_pred             EEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce
Q 017289           52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR  131 (374)
Q Consensus        52 ~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~  131 (374)
                      +|+|+++|||+|. .+.+++.++.+|+.+|+++||+|+|++++|||.+++|+..+... .+++++.++..+|++.++|++
T Consensus         1 ~Ivg~~~Tpf~r~-~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~-~~~~a~~v~~~lGl~~~~~~~   78 (386)
T cd00751           1 VIVSAVRTPIGRF-GGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGE-GQNPARQAALLAGLPESVPAT   78 (386)
T ss_pred             CEEEeecCCccCC-CCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCCchh
Confidence            6999999999983 46677899999999999999999999999999999987765543 456788899999996347999


Q ss_pred             eecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcC-----C---hhhhhhcc--cccCCCchHHHHHH
Q 017289          132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-----N---PKVEIFTQ--ARDCLLPMGITSEN  201 (374)
Q Consensus       132 ~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~-----~---~~~~~~~~--~~~~~~~~~~~a~~  201 (374)
                      +++++|+|+..++..|+++|++|.+|+|||+|+|+++..+.......     .   ..+..+..  .......|++.+++
T Consensus        79 ~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~  158 (386)
T cd00751          79 TVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAEN  158 (386)
T ss_pred             hhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHH
Confidence            99999999999999999999999999999999999987664321111     0   11111111  11123458999999


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC
Q 017289          202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK  281 (374)
Q Consensus       202 ~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~  281 (374)
                      ||++||+|+|++++|++++|+|+..|++.+.+.++|+|+++..+      ++..++++|+.+|+++|+|+|+++|||++|
T Consensus       159 ~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p  232 (386)
T cd00751         159 VAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGR------KGPVVVDRDEGPRPDTTLEKLAKLKPAFKK  232 (386)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccC------CCCeEeCCCCCCCCCCCHHHHhCCCCCcCC
Confidence            99999999999999999999999999999999999999975421      123456777788888999999999999977


Q ss_pred             CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecC
Q 017289          282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE  361 (374)
Q Consensus       282 ~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d  361 (374)
                      .+|||++|||+++|||+++||+|+++|++++.+|+++|+|++....++.....++..++++||++|||+++|||++|+||
T Consensus       233 ~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d  312 (386)
T cd00751         233 DGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPAIMGIGPVPAIPKALKRAGLTLDDIDLIEINE  312 (386)
T ss_pred             CCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCcccchhHHHHHHHHHHHcCCCHHHcCEEEeec
Confidence            67899999999999999999999999999999998999999988777766667788999999999999999999999999


Q ss_pred             cchhHHHHhh
Q 017289          362 VLVPIIAANI  371 (374)
Q Consensus       362 ~Fa~~~l~~~  371 (374)
                      +|++++++++
T Consensus       313 ~f~~~~~~~~  322 (386)
T cd00751         313 AFAAQALACL  322 (386)
T ss_pred             hhHHHHHHHH
Confidence            9999999875

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.3e-53  Score=422.62  Aligned_cols=313  Identities=38%  Similarity=0.553  Sum_probs=265.3

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dA-Gl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+|||+++|||+|.++|.++++++.+|+.+|+++||+|+ ||++++||.+++|+..+....+.++++.++..+|++ +
T Consensus         2 ~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~   80 (406)
T PRK07851          2 PEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-F   80 (406)
T ss_pred             CcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-C
Confidence            47999999999999855677889999999999999999997 999999999999976544333457788999999995 6


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc--------C--------------Chhhhhh
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ--------V--------------NPKVEIF  185 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~--------~--------------~~~~~~~  185 (374)
                      +|+++|+++|+||..++..|++.|++|.+|+|||+|+|+|+..+......        .              ++.|..+
T Consensus        81 ~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (406)
T PRK07851         81 LPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDP  160 (406)
T ss_pred             CCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccccccc
Confidence            89999999999999999999999999999999999999998765210000        0              1122221


Q ss_pred             ccc-c--cCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCC
Q 017289          186 TQA-R--DCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDG  262 (374)
Q Consensus       186 ~~~-~--~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~  262 (374)
                      ... .  .....|+..+++|+++||+++|++++|++++|+++..+.+++.|..+++|+++    |++     +.+++|+.
T Consensus       161 ~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~----p~~-----~~~~~d~~  231 (406)
T PRK07851        161 REDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTL----PDG-----TVVSTDDG  231 (406)
T ss_pred             ccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeec----CCC-----ceeCCCCC
Confidence            110 1  11345688999999999999999999999999999999999999999999864    433     24677888


Q ss_pred             CCCCCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHH
Q 017289          263 IRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPA  342 (374)
Q Consensus       263 ~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~  342 (374)
                      +|+++|+|+|+++|||++|.+.||++|||+++|||+|+||+|+++|++++.+|++||+|++.....|.....++..++++
T Consensus       232 ~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~  311 (406)
T PRK07851        232 PRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSPEIMGLGPVEASKQ  311 (406)
T ss_pred             ccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCCCccchhHHHHHHH
Confidence            88889999999999999555559999999999999999999999999999999899999998776666556678899999


Q ss_pred             HHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          343 AVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       343 Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ||++|||+++|||++|+||||++++++++
T Consensus       312 al~~Agi~~~did~~ei~d~f~~~~l~~l  340 (406)
T PRK07851        312 ALARAGMSIDDIDLVEINEAFAAQVLPSA  340 (406)
T ss_pred             HHHHhCCCHHHCCeehhhhHHHHHHHHHH
Confidence            99999999999999999999999999864

>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=100.00  E-value=1.9e-54  Score=385.36  Aligned_cols=316  Identities=37%  Similarity=0.542  Sum_probs=289.4

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      +-||||++.||+|+. |+|.+++++..+|..-|++.||+.+++.++.||.||+|++..++.++.+++|++.+..|+|.+.
T Consensus         4 kgvfiVaAKRTaFGt-fGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~   82 (396)
T KOG1391|consen    4 KGVFIVAAKRTAFGT-FGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET   82 (396)
T ss_pred             ceEEEEEeccccccc-ccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence            469999999999996 7899999999999999999999999999999999999999877777889999999999999999


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc-----ccCcC--Chhhhhhcc----cccCCCchHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS-----VVGQV--NPKVEIFTQ----ARDCLLPMGI  197 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~-----~~~~~--~~~~~~~~~----~~~~~~~~~~  197 (374)
                      |+.++++.|+||.++|..+++.|.-|++++||++|+|.||..|+-     .++.+  +..+++..+    +...-.+|++
T Consensus        83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~  162 (396)
T KOG1391|consen   83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM  162 (396)
T ss_pred             CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence            999999999999999999999999999999999999999999983     23222  222333221    2233468999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      ++|++..+|.+|||+.|+|+..|.++|.++..+|+|++||+||+++.+      +++..+..||++||.+|+|.|.++||
T Consensus       163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~k------kge~~f~vDEHpRp~TT~E~L~KLpp  236 (396)
T KOG1391|consen  163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTK------KGEQTFQVDEHPRPQTTLEQLQKLPP  236 (396)
T ss_pred             hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeec------cCceeeEecCCCCccchHHHHhhCCc
Confidence            999999999999999999999999999999999999999999998842      33457899999999999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      +|.++|.+|.+|.+.++|||+|+|++|||..++++++|+++|++|...+++|..++.+|..|++.+|+.+|++++|||++
T Consensus       237 vFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~  316 (396)
T KOG1391|consen  237 VFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLV  316 (396)
T ss_pred             hhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccCcHHHHHHHHHcCCcccccceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |++|+|+++.|++.
T Consensus       317 EvNEAFApQ~LAv~  330 (396)
T KOG1391|consen  317 EVNEAFAPQYLAVE  330 (396)
T ss_pred             EechhhchHHHHHH
Confidence            99999999999864

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=4e-53  Score=417.06  Aligned_cols=304  Identities=36%  Similarity=0.529  Sum_probs=254.6

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| +.+.++++++.+|+.+|+++||+|+|+++++||.+++|+.........++++......|++...
T Consensus         2 ~~v~Ivg~~~Tpf~~-~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~   80 (382)
T PRK07801          2 AEAYIVDAVRTPVGK-RKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV   80 (382)
T ss_pred             CceEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence            479999999999998 4566778999999999999999999999999999999976433222345777777788886568


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcc--c--ccC--c----C--ChhhhhhcccccCCCchH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI--S--VVG--Q----V--NPKVEIFTQARDCLLPMG  196 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~--~--~~~--~----~--~~~~~~~~~~~~~~~~~~  196 (374)
                      |.++++++|+||..++..|+++|++|++|+|||+|+|+|+..|+  .  ...  .    .  ...|.++ .+.. ...+.
T Consensus        81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~~~~~  158 (382)
T PRK07801         81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHR-YGDQ-EVSQF  158 (382)
T ss_pred             ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhh-ccCC-CCCHH
Confidence            99999999999999999999999999999999999999987663  1  110  0    0  0112221 1111 22444


Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCC
Q 017289          197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK  276 (374)
Q Consensus       197 ~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~  276 (374)
                      ..+++||++||+|||++++|++++|+||..|+.+|+|.++++|+.        +      ++.|+.+| ++|+|+|+++|
T Consensus       159 ~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~--------~------~~~d~~~~-~~t~e~~~~~~  223 (382)
T PRK07801        159 RGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVG--------G------VTVDEGPR-ETSLEKMAGLK  223 (382)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccc--------C------ccccCCcC-cCCHHHHhcCC
Confidence            569999999999999999999999999999999999998887763        1      46788888 69999999999


Q ss_pred             CcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 017289          277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL  356 (374)
Q Consensus       277 pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~  356 (374)
                      ||++ .+|||++|||+++|||+|+||+|+|+|++++.+|.+||.+++....++.....++..++++||++|||+++|||+
T Consensus       224 ~i~~-~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~a~~~agi~~~did~  302 (382)
T PRK07801        224 PLVE-GGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLTAPIPATRYALEKTGLSIDDIDV  302 (382)
T ss_pred             CCCC-CCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhhccChHHHHHHHHHHcCCCHHHcCE
Confidence            9983 379999999999999999999999999999998888999988765555445567789999999999999999999


Q ss_pred             EEecCcchhHHHHhh
Q 017289          357 FEINEVLVPIIAANI  371 (374)
Q Consensus       357 ~ei~d~Fa~~~l~~~  371 (374)
                      +|+||||++++++++
T Consensus       303 ~e~~d~Fa~~~~~~~  317 (382)
T PRK07801        303 VEINEAFAPVVLAWL  317 (382)
T ss_pred             eeecccchHHHHHHH
Confidence            999999999999986

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=100.00  E-value=3.8e-53  Score=417.57  Aligned_cols=310  Identities=49%  Similarity=0.710  Sum_probs=262.1

Q ss_pred             EEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee
Q 017289           53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT  132 (374)
Q Consensus        53 IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~  132 (374)
                      |||+++|||+| +.|.+.+.+..+|+.+|+++||+|+|++++|||.+++++..+... .+++++.++..+|++.+.|+++
T Consensus         1 IvG~~~tp~~~-~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~-~~~~a~~va~~lGl~~~~~~~~   78 (386)
T TIGR01930         1 IVAAARTPIGK-FGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGE-QQNIARQAALLAGLPESVPAYT   78 (386)
T ss_pred             CcceecCCccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CChHHHHHHHHcCCCCCceeee
Confidence            78999999998 456678899999999999999999999999999999987765443 3567788999999964589999


Q ss_pred             ecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC------cC-C---hhhhhhcccc-c--CCCchHHHH
Q 017289          133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG------QV-N---PKVEIFTQAR-D--CLLPMGITS  199 (374)
Q Consensus       133 v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~------~~-~---~~~~~~~~~~-~--~~~~~~~~a  199 (374)
                      ++++|+||..++..|+++|++|.+|+|||+|+|+++..+.....      .. .   ..|..+ .+. .  ....|++.+
T Consensus        79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~a~~a  157 (386)
T TIGR01930        79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILK-DGLTDPLNGLSMGLTA  157 (386)
T ss_pred             ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcC-ccccccccCCCHHHHH
Confidence            99999999999999999999999999999999998876532110      01 0   112111 111 1  135689999


Q ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcc
Q 017289          200 ENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF  279 (374)
Q Consensus       200 ~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~  279 (374)
                      ++||++||+|+|++++|++++|+||.+|+++|.|++||+|+.+..  +    ++.++++.|+.+|+++|+|+|+++|||+
T Consensus       158 ~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~--~----~~~~~~~~da~~r~~~t~e~v~~s~~i~  231 (386)
T TIGR01930       158 ENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKG--R----KGPVTVSTDEGIRPNTTLEKLAKLKPAF  231 (386)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEecc--C----CCCeEeCCCCCCCCCCCHHHHhCCCCCc
Confidence            999999999999999999999999999999999999998874431  1    1234677888899999999999999999


Q ss_pred             cCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          280 KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       280 ~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                      +|.+.||++|||+++|||+|+||+|+++|++++.+|+++|.|++....+|.....+...++++||++|||+++|||++|+
T Consensus       232 ~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~  311 (386)
T TIGR01930       232 DPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDPEIMGLGPVPAIPKALKKAGLSISDIDLFEI  311 (386)
T ss_pred             CCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCCccccccHHHHHHHHHHHcCCCHHHCCeeeh
Confidence            44344999999999999999999999999999999989999999887666666667789999999999999999999999


Q ss_pred             cCcchhHHHHhh
Q 017289          360 NEVLVPIIAANI  371 (374)
Q Consensus       360 ~d~Fa~~~l~~~  371 (374)
                      ||||++.+++++
T Consensus       312 ~d~fa~~~~~~~  323 (386)
T TIGR01930       312 NEAFAAQVLACI  323 (386)
T ss_pred             cchhHHHHHHHH
Confidence            999999999875

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=5.4e-53  Score=410.50  Aligned_cols=293  Identities=34%  Similarity=0.521  Sum_probs=258.0

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP  129 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p  129 (374)
                      +|+|||++||||+| +.|.+++.++.+|+..+++++++  |++ ++||.+++|++.+.   +.++++.++..+|++.++|
T Consensus         2 ~v~Ivg~~rTpfg~-~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~---~~~~~r~~~~~~Gl~~~~p   74 (361)
T PRK06690          2 RAVIVEAKRTPIGK-KNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP---GGNVARLSALEAGLGLHIP   74 (361)
T ss_pred             cEEEEecccCCccC-CCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC---cchHHHHHHHHcCCCCCCC
Confidence            59999999999998 57889999999999999999854  996 89999999988644   3578888999999976799


Q ss_pred             ceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCC
Q 017289          130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT  209 (374)
Q Consensus       130 ~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t  209 (374)
                      +++|+++|+||+.++..|++.|++|++|++|++|+|+||+.|+.......+.+      ... ..|++.+++|+++||+|
T Consensus        75 ~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~------~~~-~~~~~~a~~~~~~ygit  147 (361)
T PRK06690         75 GVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPET------IGD-PDMGVAAEYVAERYNIT  147 (361)
T ss_pred             ceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCccc------ccC-ccHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999987753111110000      111 23999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH-hcCCCcccCCCccccC
Q 017289          210 RQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL-AKLKPAFKKDGTTTAG  288 (374)
Q Consensus       210 ~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~-~~~~pi~~~~~~lt~~  288 (374)
                      ||++|.||..+|+|+.++..+++|++||+|++.              ++ |+.+|+++|+|++ .+++|+|.+++++|++
T Consensus       148 re~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~--------------~~-d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~  212 (361)
T PRK06690        148 REMQDEYACLSYKRTLQALEKGYIHEEILSFNG--------------LL-DESIKKEMNYERIIKRTKPAFLHNGTVTAG  212 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCceecccC--------------cc-ccccCCCCCHHHHhhcCCCcccCCCceecc
Confidence            999999999999999999999999999999851              35 7888888999999 4569999877899999


Q ss_pred             CCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHH
Q 017289          289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIA  368 (374)
Q Consensus       289 ~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l  368 (374)
                      |||+++|||+|+||+|++.|++++.+|+++|++++..+.+|..+..++..+++++|+++|++++|||++|+||+|+++++
T Consensus       213 ~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~~  292 (361)
T PRK06690        213 NSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVV  292 (361)
T ss_pred             ccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHHH
Confidence            99999999999999999999999999998999999877777766778889999999999999999999999999999999


Q ss_pred             Hhh
Q 017289          369 ANI  371 (374)
Q Consensus       369 ~~~  371 (374)
                      +++
T Consensus       293 ~~~  295 (361)
T PRK06690        293 ACA  295 (361)
T ss_pred             HHH
Confidence            875

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=100.00  E-value=6.1e-52  Score=409.65  Aligned_cols=314  Identities=33%  Similarity=0.499  Sum_probs=263.6

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP  129 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p  129 (374)
                      +|+|||+++|||+| +.+.++++++.+|+.+++++||+|+|+++++||.+++|++...+. +.++++.++..+|++.+.|
T Consensus         2 ~v~IvG~~~Tp~g~-~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~-~~~~~~~~~~~~Gl~~~~p   79 (394)
T PLN02644          2 DVCIVGVARTPIGG-FLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANL-GQAPARQAALGAGLPPSTI   79 (394)
T ss_pred             cEEEEeeccCCccC-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCc-CCcHHHHHHHhcCCCCCCc
Confidence            69999999999998 356778899999999999999999999999999999998764332 4467788999999975689


Q ss_pred             ceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc-----CcCC--hh---h-hhhcccccCCCchHHH
Q 017289          130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQVN--PK---V-EIFTQARDCLLPMGIT  198 (374)
Q Consensus       130 ~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~-----~~~~--~~---~-~~~~~~~~~~~~~~~~  198 (374)
                      +++|+++|+||..++.+|+++|++|++|+||++|+|+|++.|....     ....  ..   + ............|++.
T Consensus        80 ~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (394)
T PLN02644         80 CTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVC  159 (394)
T ss_pred             eEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHH
Confidence            9999999999999999999999999999999999999987653111     0000  00   0 0000011112358899


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCccc-ceEEeccCCCCCCCCHHHHhcCCC
Q 017289          199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEK-RVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       199 a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~-~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      +++||++||+|+|++++|++++|+|+.+|++.+.|++||+|+++...+     ++ ..+++.|+.++ +.+.+.+..++|
T Consensus       160 A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~-----~~~~~~~~~de~~~-~~~~~~l~~l~p  233 (394)
T PLN02644        160 AELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGR-----GRPSVIVDKDEGLG-KFDPAKLRKLRP  233 (394)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCC-----CCCceEeecCCCcC-CCCHHHHhCCCC
Confidence            999999999999999999999999999999999999999999865211     11 13477899987 688999999999


Q ss_pred             cccC-CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 017289          278 AFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL  356 (374)
Q Consensus       278 i~~~-~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~  356 (374)
                      +|.+ ++.+|.+|||+++||++++||+|++.|++++.+|+++|+|++.....+.....++..++++||+++|++++|||+
T Consensus       234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~Did~  313 (394)
T PLN02644        234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELFTTAPALAIPKALKHAGLEASQVDY  313 (394)
T ss_pred             cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcccchhHHHHHHHHHHHcCCCHHHCCE
Confidence            9976 589999999999999999999999999999999989999999876555555567788999999999999999999


Q ss_pred             EEecCcchhHHHHhh
Q 017289          357 FEINEVLVPIIAANI  371 (374)
Q Consensus       357 ~ei~d~Fa~~~l~~~  371 (374)
                      +|+||||++++++++
T Consensus       314 ~Ei~d~f~~~~l~~~  328 (394)
T PLN02644        314 YEINEAFSVVALANQ  328 (394)
T ss_pred             EEeCcHHHHHHHHHH
Confidence            999999999999875

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=100.00  E-value=9.2e-51  Score=401.76  Aligned_cols=282  Identities=19%  Similarity=0.257  Sum_probs=230.9

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      .++|+|||+++|||+|.     .+.++.+|+.+++++||+|+||++++||.+++|+...... ....+..++..+|++ .
T Consensus         6 ~~~v~IvG~g~tp~~~~-----~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~-~~~~~~~~a~~lGl~-~   78 (398)
T PRK06157          6 KDKVAILGMGCTKFGER-----WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIG-SGKSGTPLSRALRLP-N   78 (398)
T ss_pred             CCCeEEEEecccccccc-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-ccchhHHHHHHcCCC-C
Confidence            36899999999999973     6789999999999999999999999999999998653211 111234577899997 5


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc-C-cCChhhhhhcccccCCCchHHHHHHHHHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-G-QVNPKVEIFTQARDCLLPMGITSENVAQR  205 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  205 (374)
                      +|.++++++|+||..+|.+|++.|++|++|+|||+|+|+++..++... . .....+..+.........+++.+++||++
T Consensus        79 ~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~  158 (398)
T PRK06157         79 IPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAK  158 (398)
T ss_pred             CCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999987654211 0 01112222211122234578999999999


Q ss_pred             hCCCHHHH----HHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC
Q 017289          206 FGVTRQEQ----DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK  281 (374)
Q Consensus       206 ~G~t~e~~----~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~  281 (374)
                      ||+|+|++    ++|++++|+||.+                   ||++++++            ++|+|+|+++|||+  
T Consensus       159 yG~t~e~~~~~~a~vav~~~~~A~~-------------------np~A~~r~------------~~t~e~v~~s~~v~--  205 (398)
T PRK06157        159 YGVSREDLKRAMAHVSVKSHANGAR-------------------NPKAHLRK------------AVTEEQVLKAPMIA--  205 (398)
T ss_pred             hCCCHHHHcccccHHHHHHHHHHhc-------------------CChhhcCC------------CCCHHHHhcCCccc--
Confidence            99999999    7999999999997                   78887754            48999999999999  


Q ss_pred             CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC----------CCCCCCCHHHHHHHHHHHcCCC-
Q 017289          282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD----------PSVMGIGPAVAIPAAVKSAGLQ-  350 (374)
Q Consensus       282 ~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~----------p~~~~~~~~~A~~~Al~~AGl~-  350 (374)
                       +|++++|||+++|||+|+||+|+++||+++.++.+||+|++.....          +..+. .+..++++||++|||+ 
T Consensus       206 -~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~a~~~AGl~~  283 (398)
T PRK06157        206 -GPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFP-TTRIAARKAYREAGITD  283 (398)
T ss_pred             -CCCchhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccH-HHHHHHHHHHHHcCCCC
Confidence             7999999999999999999999999999997455699999876321          11111 2568999999999998 


Q ss_pred             -CCCccEEEecCcchhHHHHhh
Q 017289          351 -IDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       351 -~~DID~~ei~d~Fa~~~l~~~  371 (374)
                       ++|||++|+||||++++++++
T Consensus       284 ~~~Did~~Ei~D~Fs~~~l~~~  305 (398)
T PRK06157        284 PREELSMAEVHDCFSITELVTM  305 (398)
T ss_pred             chhcCCEEEEecCChHHHHHHH
Confidence             799999999999999999975

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.1e-50  Score=397.71  Aligned_cols=283  Identities=16%  Similarity=0.122  Sum_probs=235.1

Q ss_pred             CCCceEEEeeecccc-cccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CcccHHHHHHHHcCC
Q 017289           47 FDDDVVIVAAYRTAI-CKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS-TRAMECRMAAFYAGF  124 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf-~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~-~~~~~a~~va~~~Gl  124 (374)
                      |+++|+|||+|+||| +|.     .+.++.+|+.+|+++||+|+||+++|||.+++++. +... ...+++..++..+|+
T Consensus         1 ~~~~v~IvG~g~t~~~~~~-----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~~~~~~va~~LGl   74 (386)
T PRK08313          1 MKRLAAVLGTGQTKYVAKR-----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGKA-PDFFEGVMMPELFLADALGA   74 (386)
T ss_pred             CCCcEEEEEeecCCcCccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-ccccccccCchHHHHHhcCC
Confidence            345899999999999 653     57889999999999999999999999999999863 2211 112455788899999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                      . ..|++.++++|++|..++..|+++|++|.+|+|||+|+|+++.....+....++.|..+.. ......+++.+++||+
T Consensus        75 ~-~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g-~~~~~~~al~a~~ym~  152 (386)
T PRK08313         75 T-GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVG-AGAGGYFAPHVRAYIR  152 (386)
T ss_pred             C-CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccc-cchHHHHHHHHHHHHH
Confidence            5 6899999999999999999999999999999999999999876432222222223333221 2223467899999999


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      +||.++|++++|++++|+||.+                   ||+|+++++           ++|+|+|+++|||+   +|
T Consensus       153 ~~G~~~e~la~vav~~~~~A~~-------------------NP~A~~r~~-----------~~t~e~v~~s~~ia---~P  199 (386)
T PRK08313        153 RSGAPEHIGAMVAVKDRLNGAK-------------------NPYAHLHQP-----------DITLEKVMASQMLW---DP  199 (386)
T ss_pred             HHCcCHHHHHHHHHHHHHHHcc-------------------CcHHhcCCC-----------CCCHHHHhcCCccc---CC
Confidence            9999999999999999999998                   899988642           38999999999998   78


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC-------CCCCCHHHHHHHHHHHcCCC--CCCcc
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-------VMGIGPAVAIPAAVKSAGLQ--IDDIN  355 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~-------~~~~~~~~A~~~Al~~AGl~--~~DID  355 (374)
                      +|++|||+++|||+|+||+|+++|++++.+|.+||.|++... ++.       ....+.+.++++||++||++  ++|||
T Consensus       200 l~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did  278 (386)
T PRK08313        200 IRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRT-EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEID  278 (386)
T ss_pred             CchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEe-cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCC
Confidence            999999999999999999999999999988888999998763 332       12234568999999999998  69999


Q ss_pred             EEEecCcchhHHHHhh
Q 017289          356 LFEINEVLVPIIAANI  371 (374)
Q Consensus       356 ~~ei~d~Fa~~~l~~~  371 (374)
                      ++|+||||++++++++
T Consensus       279 ~~el~d~F~~~~~~~~  294 (386)
T PRK08313        279 VAEIYVPFSWFEPMWL  294 (386)
T ss_pred             EEEeccCChHHHHHHH
Confidence            9999999999999975

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.1e-50  Score=397.24  Aligned_cols=281  Identities=17%  Similarity=0.154  Sum_probs=231.2

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      .++|+|||+|.|||+|.     .+.+..+|+.+|+++||+|+|+++++||.+++++...........+..++..+|+. +
T Consensus         8 ~~~vaIvG~g~t~~~~~-----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~   81 (392)
T PRK06065          8 NKRVAVIGAGLTLFRRR-----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-R   81 (392)
T ss_pred             cCceEEEEecccCCcCC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-C
Confidence            35899999999999974     57889999999999999999999999999999863221111234677788999985 6


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc----CcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV----GQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +|.+.|+++|+||..++..|+++|++|.+|+|||+|+|+++.......    ...++.|.. +.+......+++.+++||
T Consensus        82 ~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~-p~g~~~~~~~Al~a~rym  160 (392)
T PRK06065         82 KPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEK-PLNPNLIWIFAMEMHRYM  160 (392)
T ss_pred             CCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhcc-CCCccHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999864311100    011222222 122222235799999999


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      ++||+|+|++++|++++|+||.+                   ||+|+++++            +|+|+|+++|||.   +
T Consensus       161 ~~yG~~~e~lA~vav~~~~~A~~-------------------NP~A~~r~~------------lt~e~vl~s~~ia---~  206 (392)
T PRK06065        161 ATYGIKKEEIALVSVKNKRNALN-------------------NPYAQLGSK------------ITVEDVLKSEVLV---W  206 (392)
T ss_pred             HHHCcCHHHHHHHHHHHHHhhcc-------------------CchhhhcCC------------CCHHHHhcCCccc---C
Confidence            99999999999999999999998                   899998653            8999999999998   8


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC-------CCCCCHHHHHHHHHHHcCCCC--CCc
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-------VMGIGPAVAIPAAVKSAGLQI--DDI  354 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~-------~~~~~~~~A~~~Al~~AGl~~--~DI  354 (374)
                      |||++|||+++|||+|+||+|+++|++++.+|+ ||.|++... ++.       ....+++.++++||+++|+++  +||
T Consensus       207 Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~di  284 (392)
T PRK06065        207 PVQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTL-DNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEI  284 (392)
T ss_pred             CCchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEec-CccccccccccccHHHHHHHHHHHHHcCCCCchhhC
Confidence            999999999999999999999999999998886 899998753 321       112234689999999999985  999


Q ss_pred             cEEEecCcchhHHHHhh
Q 017289          355 NLFEINEVLVPIIAANI  371 (374)
Q Consensus       355 D~~ei~d~Fa~~~l~~~  371 (374)
                      |++|+||||++++++++
T Consensus       285 D~~ei~D~Fs~~~l~~~  301 (392)
T PRK06065        285 DVAEPYDPFDYKELHHL  301 (392)
T ss_pred             cEEEecCCChHHHHHHH
Confidence            99999999999999875

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.6e-50  Score=397.71  Aligned_cols=282  Identities=17%  Similarity=0.229  Sum_probs=234.7

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      |+|+|||+|.|||+|.     .+.++.+|+.+|+++||+|+||++++||.+++|+..+... ..++++.++..+|++ ..
T Consensus         1 ~~v~IvG~g~t~~~~~-----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~-~~~~a~~v~~~lGl~-~~   73 (385)
T PRK12578          1 RRVAVIGVGNSKFGRR-----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGI-ELYPAPIVAEYSGLT-GK   73 (385)
T ss_pred             CceEEEeecccceeec-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccc-cCChHHHHHHHhCCC-CC
Confidence            5799999999999984     6889999999999999999999999999999998654322 346788899999996 57


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC-----cCChhhhhhcccccCCCchHHHHHHHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-----QVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +.++++++|+||..+|..|+..|++|.+|+|||+|+|+|+..+.....     ..+..|...+.+......+++.+++||
T Consensus        74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m  153 (385)
T PRK12578         74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHM  153 (385)
T ss_pred             CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999876532110     011122211111111234678899999


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      ++||+|+|++++|++++|+||.+                   ||++++++            ++|+|+|+++|+|+   +
T Consensus       154 ~~~g~t~e~~a~va~~~~~~A~~-------------------np~a~~~~------------~i~~e~v~~s~~i~---~  199 (385)
T PRK12578        154 AVYGTTEEQMALVSVKAHKYGAM-------------------NPKAHFQK------------PVTVEEVLKSRAIS---W  199 (385)
T ss_pred             HHhCcCHHHHHHHHHHHHHHHhc-------------------CChhhcCC------------CCCHHHHhcCCccC---C
Confidence            99999999999999999999998                   77777654            38999999999998   7


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc------CCCCCCC-CHHHHHHHHHHHcCCCCCCccE
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV------DPSVMGI-GPAVAIPAAVKSAGLQIDDINL  356 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~------~p~~~~~-~~~~A~~~Al~~AGl~~~DID~  356 (374)
                      |+|++|||+++|||+|+||+|+++|++++.+|.+||+|++....      +|+.... ++..++++||++|||+++|||+
T Consensus       200 Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~  279 (385)
T PRK12578        200 PIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEV  279 (385)
T ss_pred             CccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCE
Confidence            99999999999999999999999999999777789999997632      2222222 4568999999999999999999


Q ss_pred             EEecCcchhHHHHhh
Q 017289          357 FEINEVLVPIIAANI  371 (374)
Q Consensus       357 ~ei~d~Fa~~~l~~~  371 (374)
                      +|+||||++++++++
T Consensus       280 ~ei~d~ft~~~l~~l  294 (385)
T PRK12578        280 ATVHDAFTIAEIMGY  294 (385)
T ss_pred             EEecCcChHHHHHHH
Confidence            999999999999875

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.6e-50  Score=401.30  Aligned_cols=281  Identities=16%  Similarity=0.140  Sum_probs=230.8

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHH-HHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~-va~~~Gl~~~  127 (374)
                      ++|+|||+++|||+|.    ..+.+..+|+.+|+++||+|+|+++++||.+++++...... +.++++. ++..+|++ .
T Consensus        16 ~~VaIvG~g~Tpfgr~----~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~-g~~~~~~~~~~~lGl~-~   89 (430)
T PRK06365         16 RDVYMVAAGVTKFDKA----SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQ-RQLLAGIMVQDYLGLV-P   89 (430)
T ss_pred             cCEEEEEeeecCcccc----CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccccccc-ccchhhHHHHHhcCCC-C
Confidence            6899999999999973    34678899999999999999999999999998886543332 3455554 47899997 5


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc-----CChhhhhhcccccCCCchHHHHHHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-----VNPKVEIFTQARDCLLPMGITSENV  202 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~  202 (374)
                      +|+++++++|+||..+|.+|+++|++|.+|+|||+|+|+++..++.....     .+..|..+. +......|++.+++|
T Consensus        90 ~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~-g~~~~~~~al~a~ry  168 (430)
T PRK06365         90 KPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPL-GGFYTGYYAMMAVRH  168 (430)
T ss_pred             CceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccc-cCccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998866421111     122333221 111123589999999


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD  282 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~  282 (374)
                      +++||+|+|++++|++++|+||.+                   ||+|++++            ++|+|+|+++|+|+   
T Consensus       169 ~~~yG~t~e~la~vav~~~~~A~~-------------------NP~A~~~~------------~~t~e~v~~s~~i~---  214 (430)
T PRK06365        169 MYEFGTTVEQLAKVSVKNHGNAIH-------------------NPFAQSPM------------KITVEDVRKSPMVS---  214 (430)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHhh-------------------CcHhhcCC------------CCCHHHHhcCCccc---
Confidence            999999999999999999999998                   88888754            38999999999988   


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEec--cCCCCC------------------------CC--
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG--VDPSVM------------------------GI--  334 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~--~~p~~~------------------------~~--  334 (374)
                      +|||++|||+++|||+|+||+|+++|++++.+|+ +|.+++...  .++...                        ..  
T Consensus       215 ~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (430)
T PRK06365        215 YPLTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFR  293 (430)
T ss_pred             cCcchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEEeccccccccccccccccccccccccccccccccccccH
Confidence            7999999999999999999999999999998886 777766543  222111                        01  


Q ss_pred             CHHHHHHHHHHHcCCC--CCCccEEEecCcchhHHHHhh
Q 017289          335 GPAVAIPAAVKSAGLQ--IDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       335 ~~~~A~~~Al~~AGl~--~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ....++++||++|||+  ++|||++|+||||++++++++
T Consensus       294 ~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~~l~~l  332 (430)
T PRK06365        294 AGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTY  332 (430)
T ss_pred             HHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHHHHHHH
Confidence            1247999999999998  899999999999999999975

>PRK06158 thiolase; Provisional

Probab=100.00  E-value=6.5e-50  Score=394.14  Aligned_cols=279  Identities=20%  Similarity=0.195  Sum_probs=229.3

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      +.++|+|||+|+|||+|.     .+.++.+|+.+|+++||+|+|+++++||.+++++...     ..++..++..+|++ 
T Consensus         6 ~~~~vaIvG~g~t~~~~~-----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~-----~~~~~~la~~lGl~-   74 (384)
T PRK06158          6 LRGRTAIVGAATAGLGEA-----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD-----ALWGLSVAEYLGIR-   74 (384)
T ss_pred             CCCCEEEEEeeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC-----CCcHHHHHHHcCCC-
Confidence            347899999999999873     5789999999999999999999999999999986421     22345688899996 


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEE-eeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAA-GLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR  205 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~-G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  205 (374)
                      ..|...++.+|+|+..++..|+++|++|.+|+|||+ |.|+++.............|..+.....+...|++.+++||++
T Consensus        75 ~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~  154 (384)
T PRK06158         75 PRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQ  154 (384)
T ss_pred             CeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHH
Confidence            678888999999999999999999999999999986 7776653211111011122332222222344689999999999


Q ss_pred             hCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCcc
Q 017289          206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTT  285 (374)
Q Consensus       206 ~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~l  285 (374)
                      ||+|+|++++|++++|+||..                   ||+|++++            ++|+|+|+++|||.   +|+
T Consensus       155 yG~t~e~~a~vav~~~~~a~~-------------------NP~A~~~~------------~~t~e~vl~s~~ia---~Pl  200 (384)
T PRK06158        155 YGTTREQLAEVAVAARQWAQL-------------------NPEAFMRD------------PLTIDDVLAARMVS---DPL  200 (384)
T ss_pred             HCcCHHHHHHHHHHHHHHHhc-------------------CchhhhCC------------CCCHHHHhcCCccC---CCC
Confidence            999999999999999999997                   89998865            38999999999998   799


Q ss_pred             ccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC------CCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD------PSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       286 t~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~------p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                      |++|||+++|||+|+||+|+++|++++.+|+ +|.|++.....      ++....+...++++||++|||+++|||++|+
T Consensus       201 ~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~v-~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~El  279 (384)
T PRK06158        201 SVRDCCLVTDGAGAVVMVRADRARDLPRPPV-YVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVEL  279 (384)
T ss_pred             chhhcCCccCCeEEEEEecHHHHhhcCCCcE-EEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEe
Confidence            9999999999999999999999999988875 99998865321      2222234468999999999999999999999


Q ss_pred             cCcchhHHHHhh
Q 017289          360 NEVLVPIIAANI  371 (374)
Q Consensus       360 ~d~Fa~~~l~~~  371 (374)
                      ||||++++++++
T Consensus       280 yD~Fs~~~l~~~  291 (384)
T PRK06158        280 YDAFTINTILFL  291 (384)
T ss_pred             cCCchHHHHHHH
Confidence            999999999975

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.3e-49  Score=389.83  Aligned_cols=281  Identities=16%  Similarity=0.161  Sum_probs=224.3

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcC-CCc-cccCeEEEEeecCCCCCcccHHHHHHHHcCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR-LNP-SEVGDIVVGTVLAPGSTRAMECRMAAFYAGF  124 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAG-l~~-~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl  124 (374)
                      ++++|+|||+|+|||+|.    ..+++..+|+.+|+++||+||| |++ +|||++++++. ............++..+|+
T Consensus         2 ~~~~vaIvG~g~t~~~~~----~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~   76 (385)
T PRK06066          2 FLNRVAIVGIGWYGFRPT----TPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGG   76 (385)
T ss_pred             CCCcEEEEEeeecCCcCC----CCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHccc
Confidence            355899999999999852    2478999999999999999999 987 79999988642 1111011122345678898


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc---ccCcCChhhhhhcccccCCCchHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS---VVGQVNPKVEIFTQARDCLLPMGITSEN  201 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~  201 (374)
                      . .+|.+++   |+||..++..|+++|++|.+|+|||+|+|+++.....   .....++.|+.+.....+...+++.+++
T Consensus        77 ~-~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~r  152 (385)
T PRK06066         77 A-MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVK  152 (385)
T ss_pred             C-CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHH
Confidence            4 5788876   8999999999999999999999999999998652110   0111122333221111122246999999


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC
Q 017289          202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK  281 (374)
Q Consensus       202 ~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~  281 (374)
                      ||++||+|+|++++|++++|+||.+                   ||+|+++++            +|+|||+++|+|.  
T Consensus       153 ym~~yG~t~E~lA~Vavk~r~nA~~-------------------NP~A~~r~~------------~t~edvl~S~~ia--  199 (385)
T PRK06066        153 FMSRKGITREDLALVVEKNKKAGLS-------------------NPRASYASN------------ISLEDVLSSEYVV--  199 (385)
T ss_pred             HHHHHCcCHHHHHHHHHHHHHHHhc-------------------CChhhcCCC------------CCHHHHhcCCccc--
Confidence            9999999999999999999999998                   899998653            8999999999998  


Q ss_pred             CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc----CCCCCCCCH--HHHHHHHHHHcCCC--CCC
Q 017289          282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV----DPSVMGIGP--AVAIPAAVKSAGLQ--IDD  353 (374)
Q Consensus       282 ~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~----~p~~~~~~~--~~A~~~Al~~AGl~--~~D  353 (374)
                       +|||++|||+++|||+|+||+|+++|++++.+|+ ||.|++....    .+..+...+  ..++++||++|||+  ++|
T Consensus       200 -~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~D  277 (385)
T PRK06066        200 -YPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKE  277 (385)
T ss_pred             -CCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHH
Confidence             8999999999999999999999999999999997 9999987532    233333344  37999999999998  799


Q ss_pred             ccEEEecCcchhHHHHhh
Q 017289          354 INLFEINEVLVPIIAANI  371 (374)
Q Consensus       354 ID~~ei~d~Fa~~~l~~~  371 (374)
                      ||++|+||||++++++++
T Consensus       278 iD~~ei~D~Ft~~~l~~~  295 (385)
T PRK06066        278 VDAAEVDDRYSYKELQHI  295 (385)
T ss_pred             CcEEEEecCChHHHHHHH
Confidence            999999999999999975

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.7e-49  Score=390.35  Aligned_cols=278  Identities=18%  Similarity=0.169  Sum_probs=228.1

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      +..+|+|||+|+|||+|+     .++++.+|+.+|+++||+||||+++|||+++.+... .   ... ...++..+|+. 
T Consensus         3 ~~~~vaIvG~g~t~~~~~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~-~---~~~-~~~~~~~lGl~-   71 (388)
T PRK08142          3 IKGKAYIVGAYEHPTRKA-----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDA-P---GLG-PASMVDYLGLK-   71 (388)
T ss_pred             CCCCEEEEEEeeccceeC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC-C---Ccc-HHHHHHhCCCC-
Confidence            346899999999999984     578899999999999999999999999997652111 1   111 23578999995 


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc------ccC-cCChhhhhhcccccCCCchHHHH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS------VVG-QVNPKVEIFTQARDCLLPMGITS  199 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~a  199 (374)
                      ..|...++.+|+|+..++.+|+.+|++|.+|+|||+|+|++......      +.. ..+..|+.+. +......+++.+
T Consensus        72 ~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~Al~a  150 (388)
T PRK08142         72 LRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPY-GPTTHNLYAMCA  150 (388)
T ss_pred             CeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhccc-ccccHHHHHHHH
Confidence            67888999999999999999999999999999999999997643211      110 0112233321 222334688999


Q ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcc
Q 017289          200 ENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF  279 (374)
Q Consensus       200 ~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~  279 (374)
                      ++||++||+|+|++++|++++|+||.+                   ||+|+++++            +|+|+|+++|+|+
T Consensus       151 ~~ym~~yG~t~e~la~vav~~~~~A~~-------------------NP~A~~r~~------------~t~e~vl~s~~Ia  199 (388)
T PRK08142        151 MRHMHEYGTTSEQLAWIKVAASHHAQH-------------------NPHAMLRDV------------VTVEDVLNSPMIA  199 (388)
T ss_pred             HHHHHHHCcCHHHHHHHHHHHHHHhcc-------------------CChhhcCCC------------CCHHHHhcCCccc
Confidence            999999999999999999999999998                   899998754            8999999999998


Q ss_pred             cCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 017289          280 KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDI  354 (374)
Q Consensus       280 ~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DI  354 (374)
                         +|+|++|||+++|||+|+||+|+++||+++.+| +||.|++....     .++......+.++++||++||++++||
T Consensus       200 ---~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~di  275 (388)
T PRK08142        200 ---DPLHRLDCCVVTDGGGALVVVRPEIARSLKRPL-VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADI  275 (388)
T ss_pred             ---CCchhhccCcccCceEEEEEecHHHHhhcCCCC-EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHC
Confidence               899999999999999999999999999998655 59999987632     222233345689999999999999999


Q ss_pred             cEEEecCcchhHHHHhh
Q 017289          355 NLFEINEVLVPIIAANI  371 (374)
Q Consensus       355 D~~ei~d~Fa~~~l~~~  371 (374)
                      |++|+||||++++++++
T Consensus       276 d~~elyD~Fs~~~~~~~  292 (388)
T PRK08142        276 KYASIYDSFTITVLMQL  292 (388)
T ss_pred             CEEEEeccchHHHHHHH
Confidence            99999999999999975

>PRK06059 lipid-transfer protein; Provisional

Probab=100.00  E-value=4.5e-49  Score=390.48  Aligned_cols=284  Identities=19%  Similarity=0.218  Sum_probs=231.2

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      |+++|+|||+++|||+|.      +.++.+|+.+|+++||+|+||++++||.+++++...........++.++..+|++ 
T Consensus         2 ~~~~v~Ivg~~~t~~~r~------~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-   74 (399)
T PRK06059          2 MPEPVYILGAGMHPWGKW------GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-   74 (399)
T ss_pred             CCCcEEEEEecccccCCC------CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-
Confidence            336899999999999972      4577999999999999999999999999999876544322234568899999995 


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc-cC-c-CChhhhhh-cccccCCCchHHHHHHH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-VG-Q-VNPKVEIF-TQARDCLLPMGITSENV  202 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~-~~-~-~~~~~~~~-~~~~~~~~~~~~~a~~~  202 (374)
                      +.|.++++.+|+||+.+|.+|+++|++|++|+|||+|+|+++...... .. . .++.|..+ +.+......|++.+++|
T Consensus        75 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~  154 (399)
T PRK06059         75 GAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRR  154 (399)
T ss_pred             CCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999988521111 11 1 12233321 11222224689999999


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD  282 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~  282 (374)
                      |++||+|+|+++.|++++|+|+..                   ||++++|+            ++|+|+|+++|||+   
T Consensus       155 ~~~yg~s~e~~a~v~~~~~~~a~~-------------------Np~A~~r~------------~~t~e~v~~s~~i~---  200 (399)
T PRK06059        155 MDLYGATVEDFAQVKVKNARHGLL-------------------NPNARYRK------------EVTVEDVLASPVVS---  200 (399)
T ss_pred             HHHhCCCHHHHHHHHHHHHHHHcc-------------------CcHhhcCC------------CCCHHHHhcCCccc---
Confidence            999999999999999999999876                   88888764            48999999999999   


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHc--CCCceEEEEEEEEecc-CC----CCCCCC--------------HHHHHH
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQK--GLPILGVFRSFSAVGV-DP----SVMGIG--------------PAVAIP  341 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~--g~~p~a~i~g~~~~~~-~p----~~~~~~--------------~~~A~~  341 (374)
                      +|+|++|||+++|||+|+||+|+++|+++  +.++.+||.|++.... .+    ......              .+.+++
T Consensus       201 ~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~  280 (399)
T PRK06059        201 DPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILD  280 (399)
T ss_pred             CCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHH
Confidence            79999999999999999999999999999  6666679999987642 21    111111              147899


Q ss_pred             HHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          342 AAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       342 ~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      +||+++||+++|||++|+||||++++++++
T Consensus       281 ~a~~~agl~~~Did~~El~d~f~~~~l~~~  310 (399)
T PRK06059        281 AAYAEAGIGPEDLSLAEVYDLSTALELDWY  310 (399)
T ss_pred             HHHHHcCCCHHHCcEEeecccChHHHHHHH
Confidence            999999999999999999999999999874

>PRK08256 lipid-transfer protein; Provisional

Probab=100.00  E-value=5.6e-49  Score=388.87  Aligned_cols=280  Identities=20%  Similarity=0.264  Sum_probs=229.6

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP  129 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p  129 (374)
                      +|+|||+++|||+|.  +  ++.+..+|+.+|+++||+|+|+++++||.+++|+..+...    ....+...+|+. +.|
T Consensus         2 ~v~IvG~~~t~~~~~--~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~----~~~~~~~~lGl~-~~~   72 (391)
T PRK08256          2 KVFVAGVGMTPFEKP--G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST----SGQRALYEVGMT-GIP   72 (391)
T ss_pred             cEEEEeccccccccC--C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc----hhHHHHHHcCCC-CCC
Confidence            599999999999863  1  4678899999999999999999999999999997765432    123456788995 579


Q ss_pred             ceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc--cCc---CCh------hhhhhcccccCCCchHHH
Q 017289          130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV--VGQ---VNP------KVEIFTQARDCLLPMGIT  198 (374)
Q Consensus       130 ~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~--~~~---~~~------~~~~~~~~~~~~~~~~~~  198 (374)
                      +++++++|+||..+|..|+++|++|++|+||++|+|+++..+...  ...   ...      .|..+.....+...|++.
T Consensus        73 ~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  152 (391)
T PRK08256         73 IVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGA  152 (391)
T ss_pred             CcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHH
Confidence            999999999999999999999999999999999999998654311  000   000      011100001112368999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCc
Q 017289          199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA  278 (374)
Q Consensus       199 a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi  278 (374)
                      +++||++||+|+|++++|++++|+||.+                   ||+|++++            ++|+|+|+++|||
T Consensus       153 a~~y~~~~G~t~e~~a~vav~~~~~A~~-------------------np~A~~~~------------~~t~e~~~~s~~i  201 (391)
T PRK08256        153 GREHMEKYGTTAETFAKIGVKARRHAAN-------------------NPYAQFRD------------EYTLEDVLASPMI  201 (391)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHhhhc-------------------CChhhcCC------------CCCHHHHhcCCcc
Confidence            9999999999999999999999999998                   78887654            4899999999999


Q ss_pred             ccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCC----------CHHHHHHHHHHHcC
Q 017289          279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI----------GPAVAIPAAVKSAG  348 (374)
Q Consensus       279 ~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~----------~~~~A~~~Al~~AG  348 (374)
                      +   +|||++|||+++|||+|+||+|+++|++++++|.++|.|++....+|..+..          +++.+++++|+++|
T Consensus       202 ~---~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag  278 (391)
T PRK08256        202 W---GPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAG  278 (391)
T ss_pred             c---CCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcC
Confidence            9   7899999999999999999999999999997777899999877655433211          24689999999999


Q ss_pred             CCCCCccEEEecCcchhHHHHhhh
Q 017289          349 LQIDDINLFEINEVLVPIIAANIM  372 (374)
Q Consensus       349 l~~~DID~~ei~d~Fa~~~l~~~~  372 (374)
                      ++++|||++|+||||++++++++-
T Consensus       279 ~~~~DiD~~ei~d~f~~~~l~~le  302 (391)
T PRK08256        279 IGPEDIDVVELHDCFSANELLTYE  302 (391)
T ss_pred             CCHHHCCEEeeccCCcHHHHHHHH
Confidence            999999999999999999999863

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=100.00  E-value=9e-49  Score=390.23  Aligned_cols=296  Identities=20%  Similarity=0.209  Sum_probs=230.8

Q ss_pred             CceEEEeeecccc-ccc---C-------CCCCCCCCHHHHHHHHHHHHHHHcCCCccc--cCeEEEEeecCCCC-CcccH
Q 017289           49 DDVVIVAAYRTAI-CKA---K-------RGGFKDTLADDLLAPVLKAVIEKTRLNPSE--VGDIVVGTVLAPGS-TRAME  114 (374)
Q Consensus        49 ~~v~IvG~g~tpf-~~~---~-------~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~--ID~vi~g~~~~~~~-~~~~~  114 (374)
                      ++|||||++|||| +|.   +       .|.+.+.++.||+.+|+++||+|+||++++  ||.+++|+..+... .+.++
T Consensus        12 ~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~   91 (438)
T PTZ00455         12 KRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHL   91 (438)
T ss_pred             CceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccch
Confidence            4799999999999 872   1       366688999999999999999999999999  99999998865431 24678


Q ss_pred             HHHHHHHcCCC------CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc---CChhhhh-
Q 017289          115 CRMAAFYAGFP------ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ---VNPKVEI-  184 (374)
Q Consensus       115 a~~va~~~Gl~------~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~---~~~~~~~-  184 (374)
                      ++.++..+|++      ..+|+++|+++|+||+.+|..|+++|++|++|+|||+|+|+|++.|...+..   ....+.. 
T Consensus        92 a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~  171 (438)
T PTZ00455         92 GPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQ  171 (438)
T ss_pred             HHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhcccc
Confidence            88888777665      4799999999999999999999999999999999999999999877542211   0000100 


Q ss_pred             -hcccccCCCchHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCc-ccceEE--ec
Q 017289          185 -FTQARDCLLPMGITSENVAQRFG-VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGV-EKRVTI--SV  259 (374)
Q Consensus       185 -~~~~~~~~~~~~~~a~~~~~~~G-~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~-~~~~~~--~~  259 (374)
                       ...+......+++. .+||++|| +|+|++++|++++|+|+..                   ||+|++ +++.++  ..
T Consensus       172 ~~~~~~~~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~-------------------nP~A~~~~~~~t~~~~~  231 (438)
T PTZ00455        172 RKLDDFTFPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNK-------------------NPLAHMHTRKLSLEFCT  231 (438)
T ss_pred             ccccCcchHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhc-------------------CCHhhccCCCCCceeec
Confidence             00011101124444 38999997 9999999999999999998                   777775 332111  12


Q ss_pred             cCCCCCCCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCc----eEEEEEEEEecc----CCCC
Q 017289          260 DDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPI----LGVFRSFSAVGV----DPSV  331 (374)
Q Consensus       260 d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p----~a~i~g~~~~~~----~p~~  331 (374)
                      |+.+|   + .++++++++.   .|++++|||+++|||+|+||+|+++|++++++|    .+||+|++..+.    +|.+
T Consensus       232 d~~~~---~-~e~l~s~~i~---~pl~~~d~s~~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~  304 (438)
T PTZ00455        232 GASDK---N-PKFLGNETYK---PFLRMTDCSQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPD  304 (438)
T ss_pred             ccccc---c-hhhhcCCccc---CcCchhcCCCccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccc
Confidence            33333   1 2456677776   789999999999999999999999999999887    579999998765    4422


Q ss_pred             CC--CCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          332 MG--IGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       332 ~~--~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ..  .....++++||++||++++|||++|+||||++++++++
T Consensus       305 ~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~~l~~~  346 (438)
T PTZ00455        305 ATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCFTIAELLMY  346 (438)
T ss_pred             cccchHHHHHHHHHHHHcCCCHHHCcEeeecccChHHHHHHH
Confidence            11  12368999999999999999999999999999999975

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=100.00  E-value=8.4e-49  Score=367.33  Aligned_cols=252  Identities=46%  Similarity=0.672  Sum_probs=205.4

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      +++||||++.||||++ ++|.+++.++.+|+.++++++|+++++++++||.+++|++.+... +.++++.+++.+|++..
T Consensus         1 M~~v~Iv~a~RTPfg~-~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~-g~~~ar~~~l~aGl~~~   78 (264)
T PF00108_consen    1 MRDVVIVGAVRTPFGK-FGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGE-GQNIARQAALAAGLPES   78 (264)
T ss_dssp             -TTEEEEEEEEE--EC-TTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTT-TCHHHHHHHHHTTS-TT
T ss_pred             CCCEEEEEeeeCcccc-CCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCccccccccc-chhhhhhhhhhcccccc
Confidence            4589999999999997 689999999999999999999999999999999999999988766 78999999999999888


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc-----CcCCh------hhhhhcccccCCCchH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQVNP------KVEIFTQARDCLLPMG  196 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~-----~~~~~------~~~~~~~~~~~~~~~~  196 (374)
                      +|+++|+++|+||+.||.+|+..|++|++|++|++|+|+||+.|+...     .....      .+............|+
T Consensus        79 vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~Mg  158 (264)
T PF00108_consen   79 VPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGLSSRRWGAPLGDAKLEDSLLRDGLYDPYAGQPMG  158 (264)
T ss_dssp             SEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEECCTTSTSSSSGEEEEEHHHHHTTCCTTTTSHHH
T ss_pred             cceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccccccccccccCccccccccccccccccccccccc
Confidence            999999999999999999999999999999999999999999987542     11111      1211122334457799


Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCC
Q 017289          197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK  276 (374)
Q Consensus       197 ~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~  276 (374)
                      .++++++++||+|||++|+||++||++|.+++.+|+|++||+|++++..+     .++.+++.||.+|+++|+|+|.++|
T Consensus       159 ~tAE~~a~~ygisRee~D~~A~~Sh~rA~~A~~~G~f~~eIvpv~~~~~~-----g~~~~~~~De~~r~~~~~e~l~~L~  233 (264)
T PF00108_consen  159 ITAENLAKKYGISREEQDEYAVRSHQRAAAAQDEGRFDDEIVPVEVPDKK-----GEEVTVDRDEGIRPDTTLEKLAKLK  233 (264)
T ss_dssp             HHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHTTTTTTTBE-EEEEETT-----SEEEEE-S-STCGTT--HHHHHTS-
T ss_pred             cccccccccCCcCHHHHhhhhhcCHHHHHHhccccchhhheeeEeeeccc-----cceeeeeccchhhcchhHHHHhccc
Confidence            99999999999999999999999999999999999999999999886311     1235799999999999999999999


Q ss_pred             CcccCC-CccccCCCCCcCCcceeEEEcCHH
Q 017289          277 PAFKKD-GTTTAGNASQVSDGAGAVLLMKRS  306 (374)
Q Consensus       277 pi~~~~-~~lt~~~~~~~~DGAaAvVL~s~~  306 (374)
                      |+|.++ |.+|.+|+|+++|||+++||+|+|
T Consensus       234 p~f~~~~G~vTagnss~~~DGAaa~~l~see  264 (264)
T PF00108_consen  234 PAFRKDGGTVTAGNSSPLNDGAAAVLLMSEE  264 (264)
T ss_dssp             BSSSTTTSS-BTTTB--BEEEEEEEEEEEHH
T ss_pred             ccccccccccccccCCCccchhheEEEeecC
Confidence            999986 999999999999999999999986

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=1.2e-48  Score=387.72  Aligned_cols=290  Identities=18%  Similarity=0.225  Sum_probs=226.8

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCC-ccc-HHHHHHHHcCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-RAM-ECRMAAFYAGFPE  126 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~-~~~-~a~~va~~~Gl~~  126 (374)
                      ++|+|||+++|||+|+  +...++++.+|+.+|+++||+|+|+++++||.+++|+..+.... ... .........++. 
T Consensus         3 ~~v~Ivg~~~t~~~r~--~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~-   79 (403)
T PRK06289          3 DDVWVLGGYQSDFARN--WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW-   79 (403)
T ss_pred             CcEEEEeCCcCccccc--cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-
Confidence            5799999999999974  33468899999999999999999999999999999876443110 011 111112334552 


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccC-cC-Chhhhhh-c--ccccCCCchHHHHHH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG-QV-NPKVEIF-T--QARDCLLPMGITSEN  201 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~-~~-~~~~~~~-~--~~~~~~~~~~~~a~~  201 (374)
                      +.|+++++++|+||..+|..|+.+|++|++|+|||+|+|+++..+..... .. ...|.+. .  .++.....|++.+++
T Consensus        80 g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~  159 (403)
T PRK06289         80 GVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADE  159 (403)
T ss_pred             CCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999876532111 00 0111110 0  011112347899999


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC
Q 017289          202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK  281 (374)
Q Consensus       202 ~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~  281 (374)
                      ||++||+|+|++++|++++|+||.+                   ||+|++++..  +.     ++++.||++++|+|.  
T Consensus       160 y~~~yG~t~e~la~va~~~~~~A~~-------------------NP~A~~~~~~--~~-----~~~~~~d~~~s~~i~--  211 (403)
T PRK06289        160 YDRRYGLDEEHLRAIAEINFANARR-------------------NPNAQTRGWA--FP-----DEATNDDDATNPVVE--  211 (403)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHcc-------------------CcHhhcCccc--cc-----cccchhhhhcCCccc--
Confidence            9999999999999999999999998                   7888876531  11     247889999999876  


Q ss_pred             CCccccCCCCCcCCcceeEEEcCHHHHHHcCC-CceEEEEEEEEeccC-------------CCCCCCCHHHHHHHHHHHc
Q 017289          282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVD-------------PSVMGIGPAVAIPAAVKSA  347 (374)
Q Consensus       282 ~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~-~p~a~i~g~~~~~~~-------------p~~~~~~~~~A~~~Al~~A  347 (374)
                       +|||++|||+++|||+|+||+|+++|++++. +|.+||+|++..+..             +..+ ..+..|+++||++|
T Consensus       212 -~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~a~~~A  289 (403)
T PRK06289        212 -GRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVL-PHVRQAVLDAYRRA  289 (403)
T ss_pred             -CCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEecccccccccccccccccccc-HHHHHHHHHHHHHc
Confidence             8999999999999999999999999999986 676799999976322             1111 12468999999999


Q ss_pred             CCCCCCccEEEecCcchhHHHHhh
Q 017289          348 GLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       348 Gl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ||+++|||++|+||||++++++++
T Consensus       290 gi~~~Didv~el~D~fa~~~l~~l  313 (403)
T PRK06289        290 GVGLDDLDGFEVHDCFTPSEYLAI  313 (403)
T ss_pred             CCCHHHCeEEeeeccchHHHHHHH
Confidence            999999999999999999999976

>PRK07855 lipid-transfer protein; Provisional

Probab=100.00  E-value=2.7e-48  Score=382.35  Aligned_cols=274  Identities=16%  Similarity=0.130  Sum_probs=222.0

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      .+|+|||+|+|+|+|.     .++++.+|+.||+++||+||||+++|||++++++. ..     .....++..+|++...
T Consensus         4 ~~v~IvG~g~t~~~r~-----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~~-----~~~~~l~~~lGl~~~~   72 (386)
T PRK07855          4 GKAAIVGIGATEFSKN-----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTM-DT-----NPEIAVARALGIGELK   72 (386)
T ss_pred             CCEEEEEeeecccccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-cc-----ccHHHHHHHCCCCCCc
Confidence            6899999999999873     57899999999999999999999999999987432 11     1224688899995225


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEee--ccCCCCcccc----------cCcCChhhhhhcccc-cCCCch
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL--ESMTVNSISV----------VGQVNPKVEIFTQAR-DCLLPM  195 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~--E~~s~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~  195 (374)
                      |..+++++|+||..++.+|+.+|++|.+|+|||+|+  ++... ...+          ....++.|+.+ .+. .+...+
T Consensus        73 ~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~  150 (386)
T PRK07855         73 FFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGM-RFGQGQTGLAENPTSTGVDYGWSYP-HGLLTPAAWV  150 (386)
T ss_pred             ceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeeccccccc-ccccccccccccccccccchhhhhh-cCCCChHHHH
Confidence            667899999999999999999999999999999998  33211 1100          00112233332 121 222358


Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcc-cceEEeccCCCCCCCCHHHHhc
Q 017289          196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVE-KRVTISVDDGIRPNTTIADLAK  274 (374)
Q Consensus       196 ~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~-~~~~~~~d~~~r~~~t~e~~~~  274 (374)
                      ++.+++||++||.|+|++++|++++|+||.+                   ||+|+++ +            ++|+|+|++
T Consensus       151 al~a~~ym~~~G~t~e~lA~vavk~~~~A~~-------------------NP~A~~~~~------------~~t~e~vl~  199 (386)
T PRK07855        151 AMLARRYMHEYGATSEDFGRVAVADRKHAAT-------------------NPKAWFYGR------------PITLEDHQN  199 (386)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHHhc-------------------ChHhhhcCC------------CCCHHHHhc
Confidence            9999999999999999999999999999998                   8999874 4            389999999


Q ss_pred             CCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC----------CCCC--CHHHHHHH
Q 017289          275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS----------VMGI--GPAVAIPA  342 (374)
Q Consensus       275 ~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~----------~~~~--~~~~A~~~  342 (374)
                      +|+|+   +|+|++|||+++|||+|+||+|+++|++++.+|+ ||.|++... ++.          +...  +.+.++++
T Consensus       200 s~~Ia---~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~pv-~I~g~~~~~-~~~~~~~~~~~~~d~~~~~~~~~aa~~  274 (386)
T PRK07855        200 SRWIA---EPLRLLDCCQESDGAVALVVTSAERARDLKQRPA-VIKAAAQGS-GADQYMMTSYYRDDITGLPEMGLVARQ  274 (386)
T ss_pred             CCccc---CCchhhhcCCcCCceEEEEEecHHHHhhCCCCCE-EEEEEEEec-CCccccccccccccccccchHHHHHHH
Confidence            99998   8999999999999999999999999999998886 999998753 221          1111  22479999


Q ss_pred             HHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          343 AVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       343 Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ||++|||+++|||++|+||||++++++++
T Consensus       275 a~~~AGi~~~DiDv~El~D~Ft~~~l~~~  303 (386)
T PRK07855        275 LWAQSGLGPADIDTAILYDHFTPFVLMQL  303 (386)
T ss_pred             HHHHcCCCHHHCcEEEeccCCcHHHHHHH
Confidence            99999999999999999999999999975

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.2e-48  Score=384.57  Aligned_cols=281  Identities=21%  Similarity=0.252  Sum_probs=235.6

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS-TRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~-~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+|||+++|||++     +.+.++.+|+.+|+++||+|+|+++++||.+++|+..+... ...++++.++..+|++ .
T Consensus         2 ~~v~IvG~~~tp~~~-----~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~   75 (389)
T PRK06064          2 RDVAIIGVGQTKFGE-----LWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-P   75 (389)
T ss_pred             CcEEEEEccccccee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-C
Confidence            479999999999987     36789999999999999999999999999999987654332 1346788899999996 6


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc-----CcCChhhhhhcccccCCCchHHHHHHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQVNPKVEIFTQARDCLLPMGITSENV  202 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~  202 (374)
                      +|.++++++|+||..+|..|+++|++|++|+|||+|.|+++..+....     ....+.|..+ .+......|++.+++|
T Consensus        76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~al~a~~~  154 (389)
T PRK06064         76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEF-FGATFPGLYALIARRY  154 (389)
T ss_pred             CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccc-cCCchHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999887653110     0111223322 1222223689999999


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD  282 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~  282 (374)
                      +++||+|+|++++|++++|+||.+                   ||++++++            ++|+|+|+++||++   
T Consensus       155 ~~~yG~s~e~~a~~a~~~~~~A~~-------------------np~a~~~~------------~~t~~~~~~s~~i~---  200 (389)
T PRK06064        155 MHKYGTTEEDLALVAVKNHYNGSK-------------------NPYAQFQK------------EITVEQVLNSPPVA---  200 (389)
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHhh-------------------CcHhhhCC------------CCCHHHHhcCCccc---
Confidence            999999999999999999999998                   78877754            38999999999998   


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCC------CC-CCCCHHHHHHHHHHHcCCCCCCcc
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP------SV-MGIGPAVAIPAAVKSAGLQIDDIN  355 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p------~~-~~~~~~~A~~~Al~~AGl~~~DID  355 (374)
                      +|+|++|||+++|||+++||+|+++|++++.+|+ +|.|++.....+      +. ...+...++++||+++||+++|||
T Consensus       201 ~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v-~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did  279 (389)
T PRK06064        201 DPLKLLDCSPITDGAAAVILASEEKAKEYTDTPV-WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDID  279 (389)
T ss_pred             CCCchhhcCCCCCcceEEEEecHHHHHHhcCCCe-EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCC
Confidence            7999999999999999999999999999987776 999999875433      11 123446899999999999999999


Q ss_pred             EEEecCcchhHHHHhh
Q 017289          356 LFEINEVLVPIIAANI  371 (374)
Q Consensus       356 ~~ei~d~Fa~~~l~~~  371 (374)
                      ++|+||+|++++++++
T Consensus       280 ~~e~~d~ft~~~~~~~  295 (389)
T PRK06064        280 VAEVHDCFTIAEILAY  295 (389)
T ss_pred             EEEecCCCcHHHHHHH
Confidence            9999999999998865

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=100.00  E-value=2.1e-48  Score=383.12  Aligned_cols=276  Identities=24%  Similarity=0.259  Sum_probs=234.4

Q ss_pred             EeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceee
Q 017289           54 VAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV  133 (374)
Q Consensus        54 vG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v  133 (374)
                      ||+|+|||+|.     .+.++.+|+.+|+++||+|+|+++++||.+++|+..+... ..++++.++..+|++ .+|.+++
T Consensus         1 vG~g~t~~~~~-----~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~-~~~~a~~va~~lGl~-~~~~~~v   73 (375)
T cd00829           1 VGVGMTPFGRR-----SDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRF-QSFPGALIAEYLGLL-GKPATRV   73 (375)
T ss_pred             CeeeecCcccC-----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccc-ccchHHHHHHHcCCC-CcceeeE
Confidence            68999999973     4789999999999999999999999999999998765432 357889999999996 7899999


Q ss_pred             cccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc--cC-cCChhhhh--hcccccCCCchHHHHHHHHHHhCC
Q 017289          134 NRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV--VG-QVNPKVEI--FTQARDCLLPMGITSENVAQRFGV  208 (374)
Q Consensus       134 ~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~--~~-~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~G~  208 (374)
                      +++|+||+.++..|+++|++|++|+||++|+|+++..+...  .. .....|..  ......+...|++.+++||++||+
T Consensus        74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~  153 (375)
T cd00829          74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT  153 (375)
T ss_pred             eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999998866311  00 11112211  111122234689999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccC
Q 017289          209 TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAG  288 (374)
Q Consensus       209 t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~  288 (374)
                      |+|++++|++++|+||.+                   ||++++++            ++|+|+++++|||+   +|+|++
T Consensus       154 t~e~~~~va~~~~~~A~~-------------------np~A~~~~------------~~t~d~~~~~~~i~---~pl~~~  199 (375)
T cd00829         154 TREDLAKVAVKNHRNAAR-------------------NPYAQFRK------------PITVEDVLNSRMIA---DPLRLL  199 (375)
T ss_pred             CHHHHHHHHHHHHHHHhc-------------------CChhhcCC------------CCCHHHHhcCCccc---CCCchh
Confidence            999999999999999998                   78887654            48999999999999   799999


Q ss_pred             CCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC-------CCCCHHHHHHHHHHHcCCCCCCccEEEecC
Q 017289          289 NASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV-------MGIGPAVAIPAAVKSAGLQIDDINLFEINE  361 (374)
Q Consensus       289 ~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~-------~~~~~~~A~~~Al~~AGl~~~DID~~ei~d  361 (374)
                      |||+++|||+|+||+|+++|+++ .++.++|+|++.....+..       ...+++.++++||++|||+++|||++|+||
T Consensus       200 ~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d  278 (375)
T cd00829         200 DCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYD  278 (375)
T ss_pred             hcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence            99999999999999999999999 5666799999987655432       344667999999999999999999999999


Q ss_pred             cchhHHHHhh
Q 017289          362 VLVPIIAANI  371 (374)
Q Consensus       362 ~Fa~~~l~~~  371 (374)
                      ||++++++++
T Consensus       279 ~F~~~~l~~~  288 (375)
T cd00829         279 CFTIAELLAL  288 (375)
T ss_pred             cChHHHHHHH
Confidence            9999999976

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=100.00  E-value=2.4e-47  Score=377.01  Aligned_cols=281  Identities=21%  Similarity=0.213  Sum_probs=223.2

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCC-CcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS-TRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~-~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+|||+++|||+|     +.+.++.+|+.+|+++||+|+|+++++||.+++|+..+... .....+..+...+|+. .
T Consensus         2 ~~v~Ivg~g~tpfgr-----~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~   75 (389)
T PRK07516          2 MTASIVGWAHTPFGK-----LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F   75 (389)
T ss_pred             CcEEEEeCCcceeee-----cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence            379999999999998     36789999999999999999999999999999998753321 1111222334566774 6


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc-C-Chhhhhh--cccccCCCchHHHHHHHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-V-NPKVEIF--TQARDCLLPMGITSENVA  203 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~~~~a~~~~  203 (374)
                      .|+++++++|+||..+|..|++.|++|++|+|||+|+|+++..+...... . ...+...  ..+......|++.+++||
T Consensus        76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~  155 (389)
T PRK07516         76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYF  155 (389)
T ss_pred             CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999998765422110 0 0011100  001111235899999999


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHH----HhcCCCcc
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIAD----LAKLKPAF  279 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~----~~~~~pi~  279 (374)
                      ++||+++|++++|++++|+||..                   ||+|+++++            +|+|+    +.++|+|.
T Consensus       156 ~~yg~~~e~~a~vav~~~~~A~~-------------------nP~A~~~~~------------~t~~~~~~~~~~~~~i~  204 (389)
T PRK07516        156 QRYGDQSDALAMIAAKNHANGVA-------------------NPYAQMRKD------------LGFEFCRTVSEKNPLVA  204 (389)
T ss_pred             HHHCCCHHHHHHHHHHHHHhhhc-------------------CChhhcCCc------------ccHHhhhhhhhcCCccc
Confidence            99999999999999999999998                   788887653            56654    66778877


Q ss_pred             cCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCC-----CC-CCCCHHHHHHHHHHHcCCCCCC
Q 017289          280 KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-----SV-MGIGPAVAIPAAVKSAGLQIDD  353 (374)
Q Consensus       280 ~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p-----~~-~~~~~~~A~~~Al~~AGl~~~D  353 (374)
                         +|+|++|||+++|||+|+||+|+++|++++ +| +||.|++......     +. ...++..++++||++|||+++|
T Consensus       205 ---~pl~~~d~~~~~DGAaa~il~s~~~a~~~~-~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~d  279 (389)
T PRK07516        205 ---GPLRRTDCSLVSDGAAALVLADAETARALQ-RA-VRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDD  279 (389)
T ss_pred             ---CCCchhhcCCcCcceEEEEEecHHHHHhcC-CC-EEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHH
Confidence               799999999999999999999999999995 44 5999998763211     11 1235578999999999999999


Q ss_pred             ccEEEecCcchhHHHHhh
Q 017289          354 INLFEINEVLVPIIAANI  371 (374)
Q Consensus       354 ID~~ei~d~Fa~~~l~~~  371 (374)
                      ||++|+||||++++++++
T Consensus       280 id~~e~~d~f~~~~~~~~  297 (389)
T PRK07516        280 LSFVETHDCFTIAELIEY  297 (389)
T ss_pred             CCEEEEecCCCHHHHHHH
Confidence            999999999999998875

>PRK07937 lipid-transfer protein; Provisional

Probab=100.00  E-value=3.4e-46  Score=362.25  Aligned_cols=275  Identities=14%  Similarity=0.121  Sum_probs=213.5

Q ss_pred             CceEEEeeecccccccCCCCCCCCCH-HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcc-cHHHHHHHHcCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLA-DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRA-MECRMAAFYAGFPE  126 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~-~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~-~~a~~va~~~Gl~~  126 (374)
                      ++|+|||+|+|||+|.    ..+++. .+|+.+|+++||+||||+++|||+++.+..  ....+. .........+|+..
T Consensus         2 ~~vaIvG~g~t~~~~~----~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~~~~~~~~~~~~~G~~~   75 (352)
T PRK07937          2 RDVAVVGFAQAPHVRR----TDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS--DYLAGRAFSFISAIDSIGAVP   75 (352)
T ss_pred             CcEEEEEeeccccccC----CCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc--ccccccccchhhHHhhccCCC
Confidence            6899999999999973    124555 899999999999999999999998865432  111111 11223456678733


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc--ccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--VVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                      ..|...++   ++|..++..|+.+|++|.+|+|||+|+|+++.....  .....++.|.. +.+......+++.+++||+
T Consensus        76 ~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~-p~G~~~~~~~Al~a~~ym~  151 (352)
T PRK07937         76 PINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVA-PLWPDSVSMAGLQARAGLD  151 (352)
T ss_pred             CCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceec-cCCCchHHHHHHHHHHHHH
Confidence            45566665   468889999999999999999999999998631111  11111222221 1122233468999999999


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      +||.|+|++++|++++|+||.+                   ||+|+++              +|+|||+++|+|.   +|
T Consensus       152 ~yG~t~e~lA~vavk~r~nA~~-------------------NP~A~~r--------------it~edvl~s~~ia---~P  195 (352)
T PRK07937        152 AGKWTEEQMAEVAARSRADARR-------------------NPSAEPS--------------ISVDELLARPYFA---DP  195 (352)
T ss_pred             HhCCCHHHHHHHHHHHHHHHhh-------------------Cchhhcc--------------CCHHHHhcCCccc---CC
Confidence            9999999999999999999998                   8998863              7999999999998   89


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCC---CCHHHHHHHHHHHc-CCCCCCccEEEec
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG---IGPAVAIPAAVKSA-GLQIDDINLFEIN  360 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~---~~~~~A~~~Al~~A-Gl~~~DID~~ei~  360 (374)
                      ||++|||+++|||+|+||+|+++|++++.+| ++|.|++... ++....   ..+..+++++++++ |++++|||++|+|
T Consensus       196 L~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~-~~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei~  273 (352)
T PRK07937        196 LRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRI-ESPSLGARDLTRSPSTALAAEAATGGDAGGVDVAELH  273 (352)
T ss_pred             chhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEee-CCccccccccccHHHHHHHHHHhcCCCHHHCCEEEEe
Confidence            9999999999999999999999999999888 6999998854 332221   34456667777775 9999999999999


Q ss_pred             CcchhHHHHhh
Q 017289          361 EVLVPIIAANI  371 (374)
Q Consensus       361 d~Fa~~~l~~~  371 (374)
                      |||++++++++
T Consensus       274 D~F~~~~l~~~  284 (352)
T PRK07937        274 APFTHQELILR  284 (352)
T ss_pred             CCChHHHHHHH
Confidence            99999999875

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=100.00  E-value=5.1e-46  Score=367.18  Aligned_cols=284  Identities=26%  Similarity=0.330  Sum_probs=216.8

Q ss_pred             EeeecccccccCC--CCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHH-HHHHcCCCCCCCc
Q 017289           54 VAAYRTAICKAKR--GGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFPETVPL  130 (374)
Q Consensus        54 vG~g~tpf~~~~~--g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~-va~~~Gl~~~~p~  130 (374)
                      +|+++|||+|...  |.+....+.+|+.+|+++||+++|+++++||.+++|+..+... +.++++. +...+|+. ++|+
T Consensus         1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~-g~~~~~~~~~~~lg~~-~~p~   78 (393)
T cd00826           1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGE-GQNCAQQAAMHAGGLQ-EAPA   78 (393)
T ss_pred             CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcc-cCcHHHHHHHHcCCCC-CCcE
Confidence            5899999998421  6667788999999999999999999999999999998876543 4567764 55667774 7899


Q ss_pred             eeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCC-hhhhhhccc---ccCCCchHHHHHHHHHHh
Q 017289          131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVN-PKVEIFTQA---RDCLLPMGITSENVAQRF  206 (374)
Q Consensus       131 ~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~a~~~~~~~  206 (374)
                      ++|+++|+||+.++..|++.|++|.+|++||+|+|+|+..+........ ..+......   .+.+..+++.+.+||++|
T Consensus        79 ~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~~  158 (393)
T cd00826          79 IGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKD  158 (393)
T ss_pred             EEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999876521100000 001100000   111123455556666666


Q ss_pred             CCCHHHHHHHHHHH---HHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          207 GVTRQEQDLAAVES---HRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       207 G~t~e~~~~vav~s---~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      |+++|++..|++++   |+|+.+                   ||++++++            ++|+|+|+++|||+.+++
T Consensus       159 G~~~e~~a~v~~~~~~~~~~a~~-------------------np~a~~~~------------~~t~e~~~~~~~i~~~~~  207 (393)
T cd00826         159 GRFKDEFAKFGVKGRKGDIHSDA-------------------DEYIQFGD------------EASLDEIAKLRPAFDKED  207 (393)
T ss_pred             CCCHHHEEEEEEecCCCCEEEec-------------------CCCCCCCC------------CCCHHHHhcCCCccCCCC
Confidence            66666666666655   333333                   78887654            489999999999986668


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCC--CceEEEEEEEEe------ccCCC----CCCCCHHHHHHHHHHHcCCCC
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGL--PILGVFRSFSAV------GVDPS----VMGIGPAVAIPAAVKSAGLQI  351 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~--~p~a~i~g~~~~------~~~p~----~~~~~~~~A~~~Al~~AGl~~  351 (374)
                      |+|++|||+++|||+|+||+|+++|+++++  ++ +||.+.+..      ..+|.    .+..+++.|+++||++|||++
T Consensus       208 pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~~-v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~  286 (393)
T cd00826         208 FLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKA-REIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGI  286 (393)
T ss_pred             CEechhcCCcCCCeEEEEEecHHHHHHcCCcccc-cccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCH
Confidence            999999999999999999999999999985  33 356555432      23444    345577899999999999999


Q ss_pred             CCccEEEecCcchhHHHHhh
Q 017289          352 DDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       352 ~DID~~ei~d~Fa~~~l~~~  371 (374)
                      +|||++|+||||++++++++
T Consensus       287 ~DID~~Ei~d~Fa~~~l~~~  306 (393)
T cd00826         287 GDLDLIEAHDAFAANACATN  306 (393)
T ss_pred             HHcCeeehhhhhHHHHHHHH
Confidence            99999999999999999875

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=100.00  E-value=5.1e-44  Score=361.40  Aligned_cols=286  Identities=17%  Similarity=0.101  Sum_probs=223.5

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC--ccccCeEEEEeecCCCCCcccHHHHHHHHcCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLN--PSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF  124 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~--~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl  124 (374)
                      +.++|+|||+|+|+|++.. . -..+++.+|+.+|+++||+|+|++  +++||.+++++.....  ..+++..++..+|+
T Consensus         2 ~~~~~~IVGvG~t~~~~~~-~-~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~--~~~~~~~la~~lGl   77 (498)
T PRK08257          2 DPRTPVIVGVGQVTERPDD-P-AYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR--YRDPPGLLAERLGA   77 (498)
T ss_pred             CCCcEEEEEeeecccccCC-c-ccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc--ccCHHHHHHHHcCC
Confidence            5688999999999998631 0 011489999999999999999999  9999999988765432  34667889999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc--------ccCc--------------CChhh
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS--------VVGQ--------------VNPKV  182 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~--------~~~~--------------~~~~~  182 (374)
                      . ..+......+|.++..++.+|+.+|++|++|+|||+|+|++++.+..        |...              ....|
T Consensus        78 ~-p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (498)
T PRK08257         78 D-PARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPA  156 (498)
T ss_pred             C-CcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchh
Confidence            5 45666677788899999999999999999999999999998764321        1100              01112


Q ss_pred             hhhcccccCCCchHHHHHHHHHHhCCCHHH-HH---HHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEe
Q 017289          183 EIFTQARDCLLPMGITSENVAQRFGVTRQE-QD---LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTIS  258 (374)
Q Consensus       183 ~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~-~~---~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~  258 (374)
                      ........+...|++.+++||++||+|+|+ ++   .+.+++|++|.+                   ||+|+++++    
T Consensus       157 e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~-------------------NP~A~~r~~----  213 (498)
T PRK08257        157 ELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAK-------------------NPHAWIPRE----  213 (498)
T ss_pred             hhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhh-------------------CHHHhhCCC----
Confidence            221111112346899999999999999998 34   444589999998                   899988653    


Q ss_pred             ccCCCCCCCCHHHHh----cCCCcccCCCccccCCCCC-cCCcceeEEEcCHHHHHHcCCC--ceEEEEEEEEeccCC--
Q 017289          259 VDDGIRPNTTIADLA----KLKPAFKKDGTTTAGNASQ-VSDGAGAVLLMKRSLAVQKGLP--ILGVFRSFSAVGVDP--  329 (374)
Q Consensus       259 ~d~~~r~~~t~e~~~----~~~pi~~~~~~lt~~~~~~-~~DGAaAvVL~s~~~A~~~g~~--p~a~i~g~~~~~~~p--  329 (374)
                              +|+|+|+    ++|+|.   +|+|+++||+ .+|||+|+||+|+++||+++++  ..++|.|++......  
T Consensus       214 --------~t~eevl~~~~~~rmIa---~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~  282 (498)
T PRK08257        214 --------RSAEEIVTPTPDNRMIA---WPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDI  282 (498)
T ss_pred             --------CCHHHHhcccCCCCeee---CCccHhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCcccc
Confidence                    8999999    789998   7999999996 8999999999999999999842  235899998764321  


Q ss_pred             ---CCCCCCH--HHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          330 ---SVMGIGP--AVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       330 ---~~~~~~~--~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                         .++...+  ..++++||++|||+++|||++|+||||++.+++++
T Consensus       283 ~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~~~~~~  329 (498)
T PRK08257        283 LERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSAVQVAA  329 (498)
T ss_pred             ccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHHHHHHH
Confidence               1222333  46999999999999999999999999999999875

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=100.00  E-value=1.1e-44  Score=357.01  Aligned_cols=312  Identities=38%  Similarity=0.530  Sum_probs=268.7

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHc--CCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT--RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dA--Gl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      ++|+|+|+++|||+|.+++.+.++.+++|.....+..+++.  ++++.+||.+++|++.+.+..+.++++.+++.+|++.
T Consensus         2 ~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~   81 (392)
T COG0183           2 RDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPG   81 (392)
T ss_pred             ceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCC
Confidence            57999999999999853466777777777776666666533  5777779999999888776456799999999999986


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcc-cccCcC-----ChhhhhhcccccCCCchHHHHH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI-SVVGQV-----NPKVEIFTQARDCLLPMGITSE  200 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~a~  200 (374)
                      ++|.++|+++|+||++++..|++.|++|.+|++|++|+|+||+.|+ .++...     ++.+.+......+...|+++++
T Consensus        82 ~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~g~~A~  161 (392)
T COG0183          82 SVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPMGREGVRVLDSAVDPMFEDPLGDATPGYLMGLTAE  161 (392)
T ss_pred             CCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCccccchhhhhhhhhhccccccccccchhHHHHHHH
Confidence            6999999999999999999999999999999999999999999987 333221     2223332222333467999999


Q ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCC--CCHHHHhcCCCc
Q 017289          201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPN--TTIADLAKLKPA  278 (374)
Q Consensus       201 ~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~--~t~e~~~~~~pi  278 (374)
                      +||++||+|||++|+|+++||+||.+|+.+++| +||+|+++..  .        .+..|+..|.+  .+.|.+..++|.
T Consensus       162 ~~~~~yGitre~~d~~Av~sh~~A~~np~a~~~-~eI~~~~v~~--~--------~~~~dp~~r~d~~~~~dg~a~l~~a  230 (392)
T COG0183         162 RYAKRYGISREDQDEVAVKSHKNAAANPKAGFF-DEITPEDVLN--S--------PVVADPLRRLDCSPTSDGAAALVPA  230 (392)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHhhHhcCCC-CceeeEEecC--C--------ceecCCcccCCCCCChhhhcCceec
Confidence            999999999999999999999999999999999 9999998863  1        26788999988  999999999999


Q ss_pred             ccCC-CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCC-CCCccE
Q 017289          279 FKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQ-IDDINL  356 (374)
Q Consensus       279 ~~~~-~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~-~~DID~  356 (374)
                      |++. +.+|..|.+.+.||++++++++++.+++++..|++++.++..++.+|..+ ..+..++.++|+.+|+. ++|||+
T Consensus       231 ~~~~~g~~tagnas~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~-~~~v~av~~~~~~~~l~~~edlgl  309 (392)
T COG0183         231 FEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIM-DGPVAAVHDALTIAGLLALEDLGL  309 (392)
T ss_pred             cccCCceEEEecccccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccc-cCCHHHHHHHHHHcCCchhhhcCc
Confidence            9765 69999999999999999999999999999999999999999999999887 88899999999999999 999999


Q ss_pred             EEecCcchhHHHHhhh
Q 017289          357 FEINEVLVPIIAANIM  372 (374)
Q Consensus       357 ~ei~d~Fa~~~l~~~~  372 (374)
                      +|++|+|..+.+.++.
T Consensus       310 ~e~nEafa~~~~~~~~  325 (392)
T COG0183         310 AEKGEAFAAVALGVTK  325 (392)
T ss_pred             eecChHHHHHHHhhHH
Confidence            9999999999887643

>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=100.00  E-value=4.5e-41  Score=303.87  Aligned_cols=331  Identities=35%  Similarity=0.468  Sum_probs=282.4

Q ss_pred             cccccccccccCC--CCCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC
Q 017289           31 SICSAGEAAGYHR--KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG  108 (374)
Q Consensus        31 ~~~~~~~~~~~~~--m~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~  108 (374)
                      ..||+-..+--++  .+.-++++++|...||||--. +..++++-+.||+.+++...|++..++.+.+|.||+|++++..
T Consensus        22 ~q~ra~~ta~a~~~~k~kn~~nivlvdgvrtpfl~s-gt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqev  100 (465)
T KOG1392|consen   22 VQCRAFGTARAASAVKKKNMPNIVLVDGVRTPFLVS-GTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEV  100 (465)
T ss_pred             HHHhHhhhhhccccccccCCCceEEEecccCceeec-ccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHH
Confidence            4566554443333  344567899999999999642 4558899999999999999999999999999999999988765


Q ss_pred             CCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcC-------C--
Q 017289          109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-------N--  179 (374)
Q Consensus       109 ~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~-------~--  179 (374)
                      - ..|++|..++..|++...|+++|..+|-|+..++..+...|++|.+|+++++|+|.||.+|++....+       +  
T Consensus       101 k-tsniareaal~agfsdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nka  179 (465)
T KOG1392|consen  101 K-TSNIAREAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKA  179 (465)
T ss_pred             h-cchHHHHHHHhcCCCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccc
Confidence            3 57899999999999999999999999999999999999999999999999999999999998643210       0  


Q ss_pred             ----------hhhhh----hcc----cccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeee
Q 017289          180 ----------PKVEI----FTQ----ARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVN  241 (374)
Q Consensus       180 ----------~~~~~----~~~----~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~  241 (374)
                                ..+..    +..    .+...-.||-.+.+.+..|.++|.++|+|+.++|..|..+.++|+|.+ ++|++
T Consensus       180 k~~gqrl~l~s~fr~nflapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftd-vvpfk  258 (465)
T KOG1392|consen  180 KDVGQRLKLGSQFRKNFLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTD-VVPFK  258 (465)
T ss_pred             cchhhhhhHHhhhhhhccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccc-eeeEe
Confidence                      01111    000    012234688889999999999999999999999999999999999987 56998


Q ss_pred             ccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCccc-CCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEE
Q 017289          242 TKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR  320 (374)
Q Consensus       242 ~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~-~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~  320 (374)
                      +..++|.        ...|+.+|. .|+|++.+++|.|- |+|++|..|++-++|||.|.++++||+|.+.|.+|-+++.
T Consensus       259 v~gkd~~--------t~kdngirv-ssle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylr  329 (465)
T KOG1392|consen  259 VDGKDPK--------TIKDNGIRV-SSLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLR  329 (465)
T ss_pred             cCCCCcc--------eecCCCccc-CCHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhh
Confidence            8876664        348999996 89999999999986 5899999999999999999999999999999999999999


Q ss_pred             EEEEeccCCC-CCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhhhc
Q 017289          321 SFSAVGVDPS-VMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIMV  373 (374)
Q Consensus       321 g~~~~~~~p~-~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~~~  373 (374)
                      .|-..+.||. +...+|..++.+.|++||++.+|||.||+||+|+.++++++.+
T Consensus       330 dflyvsqdpkdqlllgpay~ipkll~kagltlkdid~feiheafagqilanlka  383 (465)
T KOG1392|consen  330 DFLYVSQDPKDQLLLGPAYVIPKLLDKAGLTLKDIDVFEIHEAFAGQILANLKA  383 (465)
T ss_pred             hheeeccCchhheecccccccHHHHHHcCCcccccchhhhHHHHhHHHHhhhhh
Confidence            9988888885 5667999999999999999999999999999999999998753

>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]

Probab=100.00  E-value=1.2e-40  Score=297.99  Aligned_cols=286  Identities=19%  Similarity=0.257  Sum_probs=232.3

Q ss_pred             CCCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcC
Q 017289           44 KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG  123 (374)
Q Consensus        44 m~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~G  123 (374)
                      |+.+.-+|||||+|+|.|.|.  |...+....+++.||+..||+|+++..++|+..++|...+...    .+...-..+|
T Consensus         1 ms~t~~rvyvvgvgmtkf~kp--g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdst----cgqraiyevg   74 (408)
T KOG1406|consen    1 MTKTKPRVYVVGVGMTKFEKP--GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST----CGQRAIYEVG   74 (408)
T ss_pred             CCCCCceEEEEecceeeecCC--CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc----cchHHHHhcc
Confidence            455556899999999999874  7778889999999999999999999999999988888776543    3334445789


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc--Cc---CChhhh----hhccccc--CC
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV--GQ---VNPKVE----IFTQARD--CL  192 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~--~~---~~~~~~----~~~~~~~--~~  192 (374)
                      +. ++|.+.|++.|++|..++..|-+.|.+|.+|+||+.|+|+|.......-  .+   .+....    .......  ..
T Consensus        75 mt-gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaa  153 (408)
T KOG1406|consen   75 MT-GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAA  153 (408)
T ss_pred             cc-CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchH
Confidence            95 8999999999999999999999999999999999999999987543210  01   111111    0011111  12


Q ss_pred             CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH
Q 017289          193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL  272 (374)
Q Consensus       193 ~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~  272 (374)
                      ..||-...++|++||..+|++++++.++|++...                   ||+.|++++            +|+|++
T Consensus       154 qmfgnagkehmekygtk~ehfakiawknhkhsvn-------------------npysqf~de------------ysldqv  202 (408)
T KOG1406|consen  154 QMFGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVN-------------------NPYSQFRDE------------YSLDQV  202 (408)
T ss_pred             HHhhhhHHHHHHHhCCCHHHHhHhhhhccccccC-------------------ChhHhhhhh------------ccHHHH
Confidence            3467778899999999999999999999999876                   899998754            899999


Q ss_pred             hcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCce-EEEEEEEEeccCCCCCCC----------CHHHHHH
Q 017289          273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL-GVFRSFSAVGVDPSVMGI----------GPAVAIP  341 (374)
Q Consensus       273 ~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~-a~i~g~~~~~~~p~~~~~----------~~~~A~~  341 (374)
                      +++|-|+   +++|.+.|||.+||++|.||+||...+++|++-- ++|+|.-..++.|..+..          ..+.+++
T Consensus       203 m~s~~v~---dflt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~  279 (408)
T KOG1406|consen  203 MKSPQVV---DFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAK  279 (408)
T ss_pred             hcchHHH---HHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHH
Confidence            9999999   7999999999999999999999999999997632 378887665555543321          2368999


Q ss_pred             HHHHHcCCCCCCccEEEecCcchhHHHHh
Q 017289          342 AAVKSAGLQIDDINLFEINEVLVPIIAAN  370 (374)
Q Consensus       342 ~Al~~AGl~~~DID~~ei~d~Fa~~~l~~  370 (374)
                      ++|++.|++|.||+++|+||||+..+|+.
T Consensus       280 ~l~aksgltpndvqvielhdcfs~nelit  308 (408)
T KOG1406|consen  280 RLFAKSGLTPNDVQVIELHDCFSANELIT  308 (408)
T ss_pred             HHHHHcCCCcccceEEEeecccchhhhhh
Confidence            99999999999999999999999988763

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=99.88  E-value=3.7e-22  Score=198.60  Aligned_cols=201  Identities=22%  Similarity=0.335  Sum_probs=144.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~----vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ..+|+.+++++||+|+|++++++|.    +++|+..+...                         ....++..++..+|+
T Consensus        71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T TIGR03150        71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA  150 (407)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence            4679999999999999999999986    66664322100                         001245668889999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                        .+|.++++++|+||+.||..|+++|++|++|++||+|+|.+.. |..                    ..++...+++.
T Consensus       151 --~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~--------------------~~~~~~~~~ls  207 (407)
T TIGR03150       151 --KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAIT-PLG--------------------IAGFAAMKALS  207 (407)
T ss_pred             --CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCC-HHH--------------------HHHHHHhCccc
Confidence              5899999999999999999999999999999999999997543 110                    00111111110


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      +++.                                     +|.            .            ..+| |+.   
T Consensus       208 ~~~~-------------------------------------~~~------------~------------~~~p-fd~---  222 (407)
T TIGR03150       208 TRND-------------------------------------DPE------------K------------ASRP-FDK---  222 (407)
T ss_pred             CCCC-------------------------------------CCC------------c------------CCCC-CcC---
Confidence            0000                                     010            0            0112 221   


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                        ..++..++|||+++||++++.|+++|.+++++|.|++...+     .|...+.+...++++||+++|++++|||++|+
T Consensus       223 --~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~  300 (407)
T TIGR03150       223 --DRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINA  300 (407)
T ss_pred             --CCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeC
Confidence              12444589999999999999999999999999999997643     22223345679999999999999999999999


Q ss_pred             cCcch
Q 017289          360 NEVLV  364 (374)
Q Consensus       360 ~d~Fa  364 (374)
                      |++++
T Consensus       301 h~tgt  305 (407)
T TIGR03150       301 HGTST  305 (407)
T ss_pred             cCCCC
Confidence            99998

FabB sequences should fall well below the noise cutoff of this model.

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=99.88  E-value=1.2e-21  Score=189.83  Aligned_cols=201  Identities=16%  Similarity=0.302  Sum_probs=146.5

Q ss_pred             HHHHHHHHHHHHHHHcCCC--ccccCeEEEEeecCCCC-----------C--------------cccHHHHHHHHcCCCC
Q 017289           74 ADDLLAPVLKAVIEKTRLN--PSEVGDIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGFPE  126 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~--~~~ID~vi~g~~~~~~~-----------~--------------~~~~a~~va~~~Gl~~  126 (374)
                      ..+++..++++||+|||+.  ++.+ ++++|+..+...           .              ...++..++..+|+  
T Consensus         4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l--   80 (342)
T PRK14691          4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHF--   80 (342)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCC--
Confidence            4578889999999999975  2332 577776543310           0              01256778899999  


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHh
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF  206 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  206 (374)
                      ++|.+++.++|+||+.||..|++.|++|++|++||+|+|.... |..                    ..++....     
T Consensus        81 ~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~-~~~--------------------~~~f~~~~-----  134 (342)
T PRK14691         81 KGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVID-TVS--------------------LAGFAAAR-----  134 (342)
T ss_pred             CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHH--------------------HHHHHHhh-----
Confidence            5899999999999999999999999999999999999987533 100                    00110000     


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCc
Q 017289          207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGT  284 (374)
Q Consensus       207 G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~  284 (374)
                                       +..   . .+            |          .++++.+            || |++  +|+
T Consensus       135 -----------------~ls---~-~~------------~----------~~p~~~~------------rP-Fd~~r~G~  158 (342)
T PRK14691        135 -----------------ALS---T-HF------------N----------STPEKAS------------RP-FDTARDGF  158 (342)
T ss_pred             -----------------hhh---c-CC------------C----------CCCCcCC------------CC-CCCCCCCc
Confidence                             000   0 00            0          0111222            23 543  466


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                      +       ++|||+++||++++.|+++|.+++++|+|++..++.     |...+.++..++++||+++||+++|||++|.
T Consensus       159 v-------~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIea  231 (342)
T PRK14691        159 V-------MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNA  231 (342)
T ss_pred             c-------ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence            6       899999999999999999999999999999987654     3334456789999999999999999999999


Q ss_pred             cCcchhH
Q 017289          360 NEVLVPI  366 (374)
Q Consensus       360 ~d~Fa~~  366 (374)
                      |++++..
T Consensus       232 HgtgT~~  238 (342)
T PRK14691        232 HATSTPV  238 (342)
T ss_pred             cCCCCcC
Confidence            9999864

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.88  E-value=9.5e-22  Score=196.03  Aligned_cols=201  Identities=22%  Similarity=0.326  Sum_probs=147.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-------------------------CCcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPG-------------------------STRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~-------------------------~~~~~~a~~va~~~Gl  124 (374)
                      ..+|+.+++++||+|||++++++|    ++++|+..+..                         ......+..++..+|+
T Consensus        72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  151 (411)
T PRK07314         72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA  151 (411)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence            467899999999999999998888    57776543210                         0011245678899999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                        .+|.++++++|+||+.+|..|+++|++|++|++||+|+|.+.. |..                    ..++.+.+.+.
T Consensus       152 --~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~--------------------~~~~~~~~~ls  208 (411)
T PRK07314        152 --KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAIT-PLG--------------------IAGFAAARALS  208 (411)
T ss_pred             --CCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCC-HHH--------------------HHHHHHhcccc
Confidence              5899999999999999999999999999999999999987653 100                    01111000000


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      ++                                     ..||....                        +| |+.   
T Consensus       209 ~~-------------------------------------~~~p~~~~------------------------~p-fd~---  223 (411)
T PRK07314        209 TR-------------------------------------NDDPERAS------------------------RP-FDK---  223 (411)
T ss_pred             CC-------------------------------------CCCCCcCc------------------------CC-CcC---
Confidence            00                                     01333111                        12 321   


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                        ..|++.++|||+++||++++.|+++|.+++++|.|++...+     .|...+.+...++++||+++|++++|||++|.
T Consensus       224 --~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~  301 (411)
T PRK07314        224 --DRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINA  301 (411)
T ss_pred             --CCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEc
Confidence              13666799999999999999999999999999999998652     33334445679999999999999999999999


Q ss_pred             cCcch
Q 017289          360 NEVLV  364 (374)
Q Consensus       360 ~d~Fa  364 (374)
                      |+.++
T Consensus       302 hgtgt  306 (411)
T PRK07314        302 HGTST  306 (411)
T ss_pred             cccCC
Confidence            99887

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=99.87  E-value=3.2e-21  Score=192.69  Aligned_cols=203  Identities=22%  Similarity=0.366  Sum_probs=145.3

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCC-ccccCeEEEEeecCCCCC-----------------------------cccHHHHHHH
Q 017289           71 DTLADDLLAPVLKAVIEKTRLN-PSEVGDIVVGTVLAPGST-----------------------------RAMECRMAAF  120 (374)
Q Consensus        71 ~~s~~eLa~~A~~~AL~dAGl~-~~~ID~vi~g~~~~~~~~-----------------------------~~~~a~~va~  120 (374)
                      .....+|+..++++||+|+|++ +++++...+|...+.+..                             ...++..++.
T Consensus        74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~  153 (421)
T PTZ00050         74 ESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI  153 (421)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence            3446889999999999999998 677764333333322110                             0124567888


Q ss_pred             HcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHH
Q 017289          121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE  200 (374)
Q Consensus       121 ~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  200 (374)
                      .+|+  .+|.+++.++|+||+.||.+|+++|++|++|++||+|+|.+.. |..                    ..++   
T Consensus       154 ~~~l--~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~-p~~--------------------~~~f---  207 (421)
T PTZ00050        154 KHKL--KGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASIT-PVS--------------------FAGF---  207 (421)
T ss_pred             HhCC--CCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCC-HHH--------------------HHHH---
Confidence            9999  5899999999999999999999999999999999999998542 210                    0000   


Q ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCccc
Q 017289          201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK  280 (374)
Q Consensus       201 ~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~  280 (374)
                         .+.+.                        +....      ..+|.            ..+            +| |+
T Consensus       208 ---~~~~~------------------------l~~~~------~~~p~------------~~~------------~p-fd  229 (421)
T PTZ00050        208 ---SRMRA------------------------LCTKY------NDDPQ------------RAS------------RP-FD  229 (421)
T ss_pred             ---Hhhhc------------------------cccCc------CCCCC------------ccC------------CC-Cc
Confidence               00000                        00000      00111            111            22 32


Q ss_pred             C--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHH-cCCCCC
Q 017289          281 K--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKS-AGLQID  352 (374)
Q Consensus       281 ~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~-AGl~~~  352 (374)
                      +  +|.+       ++|||+++||++++.|+++|.+++++|+|++.+.+     .|...+.+..+++++||++ ||++++
T Consensus       230 ~~~~G~~-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~  302 (421)
T PTZ00050        230 KDRAGFV-------MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININ  302 (421)
T ss_pred             CCCCCEe-------eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChh
Confidence            2  2444       79999999999999999999999999999998754     2334445668999999999 999999


Q ss_pred             CccEEEecCcch
Q 017289          353 DINLFEINEVLV  364 (374)
Q Consensus       353 DID~~ei~d~Fa  364 (374)
                      |||++|+|.+++
T Consensus       303 dId~ie~hgtgt  314 (421)
T PTZ00050        303 DVDYVNAHATST  314 (421)
T ss_pred             hCCEEECCCccC
Confidence            999999999997

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.86  E-value=3.7e-21  Score=191.59  Aligned_cols=198  Identities=22%  Similarity=0.336  Sum_probs=144.7

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC--------------C-----------cccHHHHHHHHcCCC
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS--------------T-----------RAMECRMAAFYAGFP  125 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~--------------~-----------~~~~a~~va~~~Gl~  125 (374)
                      ..++..++++||+|+|++..+.+    ++++|+..+...              .           ...++..++..+|+ 
T Consensus        75 ~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl-  153 (414)
T PRK08722         75 IQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL-  153 (414)
T ss_pred             HHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC-
Confidence            46888999999999999765444    577876543210              0           01367788999999 


Q ss_pred             CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHH
Q 017289          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR  205 (374)
Q Consensus       126 ~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  205 (374)
                       .+|.++++++|+|++.||..|+++|++|++|++||+|+|...+ +..                    ..++..      
T Consensus       154 -~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------------~~~f~~------  205 (414)
T PRK08722        154 -RGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKAST-PLG--------------------MAGFGA------  205 (414)
T ss_pred             -CCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHH--------------------HHHHHH------
Confidence             5899999999999999999999999999999999999997543 100                    000000      


Q ss_pred             hCC-CHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 017289          206 FGV-TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D  282 (374)
Q Consensus       206 ~G~-t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~  282 (374)
                      .+. +..                                  |+          ++++.+            || |+.  +
T Consensus       206 ~~~ls~~----------------------------------~~----------~p~~~~------------rp-fd~~~~  228 (414)
T PRK08722        206 AKALSTR----------------------------------ND----------EPQKAS------------RP-WDKDRD  228 (414)
T ss_pred             cCCcccC----------------------------------CC----------CCcccc------------Cc-CcCCCC
Confidence            000 000                                  00          011122            23 442  4


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      |.+       ++||++++||++++.|+++|.+++++|.|++..++     .|...+.+...++++||+++||+++||||+
T Consensus       229 G~~-------~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~i  301 (414)
T PRK08722        229 GFV-------LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYV  301 (414)
T ss_pred             ceE-------eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEE
Confidence            665       89999999999999999999999999999998653     233233345789999999999999999999


Q ss_pred             EecCcchh
Q 017289          358 EINEVLVP  365 (374)
Q Consensus       358 ei~d~Fa~  365 (374)
                      |+|++++.
T Consensus       302 e~hgtgt~  309 (414)
T PRK08722        302 NAHGTSTP  309 (414)
T ss_pred             EccCccCC
Confidence            99999975

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.86  E-value=3.7e-21  Score=192.57  Aligned_cols=200  Identities=21%  Similarity=0.381  Sum_probs=144.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCcccc-C----eEEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEV-G----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~I-D----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      ...|+..++++||+|+|++++++ +    ++++|+..+...                         ....++..++..+|
T Consensus        82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g  161 (424)
T PRK06333         82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG  161 (424)
T ss_pred             HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence            35688999999999999988776 4    577776432210                         00124567888999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHH-HHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT-SENV  202 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~  202 (374)
                      +  ++|.++++++|+||+.||..|++.|++|++|++||+|+|.+.+ +..                    ..++. ...+
T Consensus       162 l--~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~~--------------------~~~f~~~~~l  218 (424)
T PRK06333        162 F--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAID-RVS--------------------LAGFAAARAL  218 (424)
T ss_pred             C--CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHH--------------------HHHHHHcccc
Confidence            9  5899999999999999999999999999999999999998543 110                    00000 0001


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-  281 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-  281 (374)
                      ..+|+.+.                                                 ++.            .+| |+. 
T Consensus       219 ~~~~~~~p-------------------------------------------------~~~------------~~P-fd~~  236 (424)
T PRK06333        219 STRFNDAP-------------------------------------------------EQA------------SRP-FDRD  236 (424)
T ss_pred             cccCCCCC-------------------------------------------------CcC------------CCC-CCCC
Confidence            11111111                                                 111            122 322 


Q ss_pred             -CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 017289          282 -DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDIN  355 (374)
Q Consensus       282 -~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID  355 (374)
                       +|.+       ++|||++|||++++.|+++|.+++++|.|++..++.     |...+.+..+++++||++||++++|||
T Consensus       237 ~~G~~-------~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId  309 (424)
T PRK06333        237 RDGFV-------MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQ  309 (424)
T ss_pred             CCCeE-------EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCC
Confidence             3554       799999999999999999999999999999986432     222233557999999999999999999


Q ss_pred             EEEecCcchh
Q 017289          356 LFEINEVLVP  365 (374)
Q Consensus       356 ~~ei~d~Fa~  365 (374)
                      ++|.|++++.
T Consensus       310 ~i~~hgtgt~  319 (424)
T PRK06333        310 HLNAHATSTP  319 (424)
T ss_pred             EEeccCCCCc
Confidence            9999999987

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=99.85  E-value=1e-20  Score=189.77  Aligned_cols=202  Identities=20%  Similarity=0.348  Sum_probs=143.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCc-----cccCeEEEEeecCCCC--------------C-----------cccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNP-----SEVGDIVVGTVLAPGS--------------T-----------RAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~-----~~ID~vi~g~~~~~~~--------------~-----------~~~~a~~va~~~G  123 (374)
                      ...|+.+|+++||+|||+++     .+..++++|+..+...              .           ...++..++..+|
T Consensus        93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g  172 (437)
T PLN02836         93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG  172 (437)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence            55789999999999999854     2456788886533210              0           0124567889999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHH-HH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE-NV  202 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~  202 (374)
                      +  .+|.++++++|+||..||..|+++|++|++|++||+|+|.+.. +..                    ..++... .+
T Consensus       173 l--~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~--------------------~~~~~~~~~l  229 (437)
T PLN02836        173 F--QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSID-ALS--------------------IAGFSRSRAL  229 (437)
T ss_pred             C--CCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHH--------------------HHHHHHhhhh
Confidence            9  5899999999999999999999999999999999999997432 100                    0011000 00


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD  282 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~  282 (374)
                      +.+++.                                     +|.            +.            .+| |+. 
T Consensus       230 ~~~~~~-------------------------------------~p~------------~~------------~~p-fd~-  246 (437)
T PLN02836        230 STKFNS-------------------------------------CPT------------EA------------SRP-FDC-  246 (437)
T ss_pred             hcccCC-------------------------------------Ccc------------cc------------cCC-ccc-
Confidence            111111                                     111            01            122 221 


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                          .-+...++|||+++||++++.|+++|.+++++|.|++..++.     |...+.+..+++++||++|||+++|||++
T Consensus       247 ----~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~v  322 (437)
T PLN02836        247 ----DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYV  322 (437)
T ss_pred             ----CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEE
Confidence                114445899999999999999999999999999999986532     22222334689999999999999999999


Q ss_pred             EecCcchh
Q 017289          358 EINEVLVP  365 (374)
Q Consensus       358 ei~d~Fa~  365 (374)
                      |+|+.++.
T Consensus       323 e~hgtgt~  330 (437)
T PLN02836        323 NAHATSTP  330 (437)
T ss_pred             EccCCcCc
Confidence            99999984

>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=5.7e-21  Score=178.23  Aligned_cols=200  Identities=24%  Similarity=0.400  Sum_probs=152.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCcc---ccC----eEEEEeecCCCC-----------C--------------cccHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPS---EVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFY  121 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~---~ID----~vi~g~~~~~~~-----------~--------------~~~~a~~va~~  121 (374)
                      +..|+..|.++||+|+|+.+.   +.|    +|.+|..++...           .              ....+.+++..
T Consensus        94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~  173 (440)
T KOG1394|consen   94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK  173 (440)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence            456899999999999998553   344    466665443321           0              01246788999


Q ss_pred             cCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHH
Q 017289          122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN  201 (374)
Q Consensus       122 ~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  201 (374)
                      +|+  .+|.+.+.++|++|..+|..+++.|+.|++|++|++|.|+.-. |..                    .-|+    
T Consensus       174 ~gl--~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~-Pls--------------------laGF----  226 (440)
T KOG1394|consen  174 YGL--RGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACIN-PLS--------------------LAGF----  226 (440)
T ss_pred             hcC--cCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeec-chh--------------------hhhH----
Confidence            999  5899999999999999999999999999999999999997533 211                    0111    


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC
Q 017289          202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK  281 (374)
Q Consensus       202 ~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~  281 (374)
                             +           +.+|...               ++.||+.                        .+|| |++
T Consensus       227 -------~-----------r~RALSt---------------~nd~P~~------------------------aSRP-fD~  248 (440)
T KOG1394|consen  227 -------S-----------RARALST---------------RNDNPQK------------------------ASRP-FDK  248 (440)
T ss_pred             -------H-----------HHHHhhh---------------cCCCccc------------------------cCCC-Ccc
Confidence                   1           1122210               0115542                        2345 654


Q ss_pred             --CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 017289          282 --DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDI  354 (374)
Q Consensus       282 --~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DI  354 (374)
                        +|++       +++|++.+||++.|+|+++|.+++++++||+.+++     .|+..+.+...++++||++|||.|+||
T Consensus       249 ~RdGFV-------mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i  321 (440)
T KOG1394|consen  249 KRDGFV-------MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDI  321 (440)
T ss_pred             CCCcee-------eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhc
Confidence              6888       99999999999999999999999999999998763     677788889999999999999999999


Q ss_pred             cEEEecCcchh
Q 017289          355 NLFEINEVLVP  365 (374)
Q Consensus       355 D~~ei~d~Fa~  365 (374)
                      ||++.|--.|.
T Consensus       322 ~YvNAHATST~  332 (440)
T KOG1394|consen  322 DYVNAHATSTP  332 (440)
T ss_pred             CeeecccccCc
Confidence            99999976543

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.84  E-value=1e-19  Score=169.20  Aligned_cols=171  Identities=27%  Similarity=0.315  Sum_probs=146.9

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      +..+|+.+|++++|+++|+++++||.|++++..+... .+..+..++..+|++ ++|.++++.+|+|+..++..|.+.|+
T Consensus         6 ~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~-~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~   83 (254)
T cd00327           6 TASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGE-FSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQ   83 (254)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCcc-ccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998766542 456788899999996 78999999999999999999999999


Q ss_pred             cCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 017289          153 AGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGK  232 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~  232 (374)
                      +|+++.+||+|+|.                                                                  
T Consensus        84 ~g~~~~~lv~~~e~------------------------------------------------------------------   97 (254)
T cd00327          84 NGKADIVLAGGSEE------------------------------------------------------------------   97 (254)
T ss_pred             CCCCCEEEEEecce------------------------------------------------------------------
Confidence            99999999999874                                                                  


Q ss_pred             CCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcC
Q 017289          233 FKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG  312 (374)
Q Consensus       233 ~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g  312 (374)
                                                                                +.++|||+|+||++++.+++++
T Consensus        98 ----------------------------------------------------------~~~gdGAaa~vL~~~~~a~~~~  119 (254)
T cd00327          98 ----------------------------------------------------------FVFGDGAAAAVVESEEHALRRG  119 (254)
T ss_pred             ----------------------------------------------------------eeecceEEEEEECcHHHHHHCC
Confidence                                                                      0046899999999999999999


Q ss_pred             CCceEEEEEEEEeccCCCC----CCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHH
Q 017289          313 LPILGVFRSFSAVGVDPSV----MGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAA  369 (374)
Q Consensus       313 ~~p~a~i~g~~~~~~~p~~----~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~  369 (374)
                      .+|+.+|.++......+..    ......++++++|+++|++++|||++++|+.++.....
T Consensus       120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~  180 (254)
T cd00327         120 AHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDA  180 (254)
T ss_pred             CceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccH
Confidence            9999999998865433321    22345799999999999999999999999999765443

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.83  E-value=1e-19  Score=175.83  Aligned_cols=206  Identities=23%  Similarity=0.239  Sum_probs=155.1

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCC----ccccCeEEEEeecCCCC----------------
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLN----PSEVGDIVVGTVLAPGS----------------  109 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~----~~~ID~vi~g~~~~~~~----------------  109 (374)
                      +++|+|+|.+              ..+|+.+|+++||+++|++    +++||+|++|+..+...                
T Consensus         1 ~~~i~g~g~~--------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~   66 (332)
T cd00825           1 RAVITGLGSY--------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYV   66 (332)
T ss_pred             CceEEcccHH--------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcch
Confidence            4789999987              4679999999999999999    89999999987654321                


Q ss_pred             ----CcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhh
Q 017289          110 ----TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIF  185 (374)
Q Consensus       110 ----~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~  185 (374)
                          ..+..+..++..+|+  ++|+++++.+|+|+..++..|.++|++|+++.+||+|+|.++.....            
T Consensus        67 ~~~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~------------  132 (332)
T cd00825          67 VTKAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDC------------  132 (332)
T ss_pred             hhcccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHH------------
Confidence                023356789999999  58999999999999999999999999999999999999976541000            


Q ss_pred             cccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCC
Q 017289          186 TQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRP  265 (374)
Q Consensus       186 ~~~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~  265 (374)
                                     .+....+..                                    +|..            ..  
T Consensus       133 ---------------~~~~~~~~~------------------------------------~~~~------------~~--  147 (332)
T cd00825         133 ---------------EFDAMGALS------------------------------------TPEK------------AS--  147 (332)
T ss_pred             ---------------HHHhhcccc------------------------------------CCCC------------CC--
Confidence                           000000000                                    1110            00  


Q ss_pred             CCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCC------CCCHHHH
Q 017289          266 NTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM------GIGPAVA  339 (374)
Q Consensus       266 ~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~------~~~~~~A  339 (374)
                                +| |+     ...+++.++||++|+||++++.|++++.++++++.+++... ++...      ......+
T Consensus       148 ----------~~-~~-----~~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~  210 (332)
T cd00825         148 ----------RT-FD-----AAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTAATI-DGAGMGAFAPSAEGLARA  210 (332)
T ss_pred             ----------CC-CC-----CCCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEcc-CCCCCCCCCcCHHHHHHH
Confidence                      11 21     12366778999999999999999999998888999988653 22211      1234688


Q ss_pred             HHHHHHHcCCCCCCccEEEecCcchh
Q 017289          340 IPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       340 ~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      ++++|+++|++++|||+++.|..+..
T Consensus       211 i~~al~~agl~~~did~~~~h~~~~~  236 (332)
T cd00825         211 AKEALAVAGLTVWDIDYLVAHGTGTP  236 (332)
T ss_pred             HHHHHHHcCCCHhHCCEEEccCCCCC
Confidence            99999999999999999999998854

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=99.83  E-value=3.8e-20  Score=185.17  Aligned_cols=197  Identities=25%  Similarity=0.386  Sum_probs=143.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC------------------CcccHHHHHHHHcCCCCCCCce
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLR  131 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~------------------~~~~~a~~va~~~Gl~~~~p~~  131 (374)
                      ...|+.+|+++||+|||+++++||    +|++|+......                  .....+..++..+|+  .+|.+
T Consensus        87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl--~g~~~  164 (424)
T smart00825       87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL--RGPSV  164 (424)
T ss_pred             HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC--CCCcc
Confidence            346899999999999999999999    788886532210                  012356678899999  47999


Q ss_pred             eecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHH
Q 017289          132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ  211 (374)
Q Consensus       132 ~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e  211 (374)
                      +++.+|+||..+|..|+++|++|++|++||+|+|.+.. +..                    ..++      ...+.   
T Consensus       165 ~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~-~~~--------------------~~~~------~~~~~---  214 (424)
T smart00825      165 TVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILS-PDT--------------------FVGF------SRAGM---  214 (424)
T ss_pred             ccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCC-HHH--------------------HHHH------hhcCC---
Confidence            99999999999999999999999999999999987543 000                    0000      00000   


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCC
Q 017289          212 EQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNAS  291 (374)
Q Consensus       212 ~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~  291 (374)
                                           +            .|            ++.+            +| |+.     ..++.
T Consensus       215 ---------------------l------------~~------------~~~~------------~p-f~~-----~~~g~  231 (424)
T smart00825      215 ---------------------L------------SP------------DGRC------------KT-FDA-----DADGY  231 (424)
T ss_pred             ---------------------C------------CC------------CCCC------------CC-CCC-----CCCcc
Confidence                                 0            00            0111            12 221     12344


Q ss_pred             CcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC-----CCCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          292 QVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV-----MGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       292 ~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~-----~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      .++|||+++||++++.|++.|.+++++|.|++........     ...+...++++||+++|++++|||+++.|++++.
T Consensus       232 ~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~  310 (424)
T smart00825      232 VRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTP  310 (424)
T ss_pred             cccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCC
Confidence            5899999999999999999999999999999976432211     1123368999999999999999999999988764

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=99.82  E-value=1.9e-19  Score=183.56  Aligned_cols=197  Identities=20%  Similarity=0.321  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHHHcCCCcc---ccC----eEEEEeecCCCC------------------------CcccHHHHHHHHcCC
Q 017289           76 DLLAPVLKAVIEKTRLNPS---EVG----DIVVGTVLAPGS------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~---~ID----~vi~g~~~~~~~------------------------~~~~~a~~va~~~Gl  124 (374)
                      .++..++++||+|+|++++   +++    +|++|+..+...                        .....+..++..+|+
T Consensus       201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl  280 (540)
T PLN02787        201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW  280 (540)
T ss_pred             HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence            4778899999999999754   233    688887543210                        001235678888999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                        .+|.++++++|+|+..||..|+++|++|++|++||+|+|.... |..                    ..++..-+.  
T Consensus       281 --~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~-p~~--------------------~~~f~~~~a--  335 (540)
T PLN02787        281 --MGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAII-PIG--------------------LGGFVACRA--  335 (540)
T ss_pred             --CCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccC-HHH--------------------HHHHHHHHH--
Confidence              5899999999999999999999999999999999999996432 110                    001100000  


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D  282 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~  282 (374)
                         ++.               +                   |.          ++++.            +|| |+.  +
T Consensus       336 ---LS~---------------~-------------------~~----------~p~~~------------~rP-FD~~rd  355 (540)
T PLN02787        336 ---LSQ---------------R-------------------ND----------DPTKA------------SRP-WDMNRD  355 (540)
T ss_pred             ---hhc---------------c-------------------CC----------Ccccc------------cCC-cccCCC
Confidence               000               0                   00          01111            233 543  4


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      |.+       ++||++++||++++.|+++|.+++++|.|++.+.+.     |...+.+...++++||++|||+++||||+
T Consensus       356 Gfv-------~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyI  428 (540)
T PLN02787        356 GFV-------MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYI  428 (540)
T ss_pred             Ccc-------cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEE
Confidence            666       899999999999999999999999999999976532     23333445789999999999999999999


Q ss_pred             EecCcch
Q 017289          358 EINEVLV  364 (374)
Q Consensus       358 ei~d~Fa  364 (374)
                      +.|-.-+
T Consensus       429 naHGTGT  435 (540)
T PLN02787        429 NAHATST  435 (540)
T ss_pred             EccCccC
Confidence            9997654

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=99.82  E-value=3.6e-19  Score=177.22  Aligned_cols=203  Identities=22%  Similarity=0.325  Sum_probs=145.7

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccc-cC----eEEEEeecCCCC---------------------Cc--ccHHHHHHHHcCC
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSE-VG----DIVVGTVLAPGS---------------------TR--AMECRMAAFYAGF  124 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~-ID----~vi~g~~~~~~~---------------------~~--~~~a~~va~~~Gl  124 (374)
                      ....|+.+++++||+|||+++++ ++    ++++|+..+...                     -.  ..++..++..+|+
T Consensus        71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T cd00828          71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS  150 (407)
T ss_pred             HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence            35678999999999999998877 65    466665422110                     00  3467788999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                      . ++|.++++++|+||+.||..|+++|++|++|++||+|+|.++  +...                    .++      .
T Consensus       151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~--~~~~--------------------~~f------~  201 (407)
T cd00828         151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL--EEGL--------------------SGF------A  201 (407)
T ss_pred             C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC--hHHH--------------------HHH------H
Confidence            3 589999999999999999999999999999999999999875  2110                    000      0


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      ..+.                        +..+       ...|.            ..            .+| |+    
T Consensus       202 ~~~~------------------------ls~~-------~~~~~------------~~------------~~p-fd----  221 (407)
T cd00828         202 NMGA------------------------LSTA-------EEEPE------------EM------------SRP-FD----  221 (407)
T ss_pred             HcCC------------------------CCCC-------CCCCC------------cc------------cCC-Cc----
Confidence            0000                        0000       00000            01            122 21    


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC----CCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV----MGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~----~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                       +..++..++|||+++||++++.|+++|.+++++|.|++...+....    ...+..+++++||++||++++|||++|.|
T Consensus       222 -~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~h  300 (407)
T cd00828         222 -ETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAH  300 (407)
T ss_pred             -CCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEecc
Confidence             2234455899999999999999999999999999999876543221    22355799999999999999999999999


Q ss_pred             Ccchh
Q 017289          361 EVLVP  365 (374)
Q Consensus       361 d~Fa~  365 (374)
                      ...+.
T Consensus       301 gtgt~  305 (407)
T cd00828         301 GTSTP  305 (407)
T ss_pred             cccCc
Confidence            99874

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.81  E-value=6.7e-19  Score=173.28  Aligned_cols=200  Identities=24%  Similarity=0.354  Sum_probs=147.9

Q ss_pred             CHHHHHHHHHHHHHHHcCCC-ccccC---eEEEEeecCCCCC--------------------------cccHHHHHHHHc
Q 017289           73 LADDLLAPVLKAVIEKTRLN-PSEVG---DIVVGTVLAPGST--------------------------RAMECRMAAFYA  122 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~-~~~ID---~vi~g~~~~~~~~--------------------------~~~~a~~va~~~  122 (374)
                      ....|+..|+.+||+|+|++ ..+.+   ++++|+..++...                          ....+..++..+
T Consensus        70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~  149 (412)
T COG0304          70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF  149 (412)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence            46789999999999999997 33443   3555554432210                          012467788999


Q ss_pred             CCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHH
Q 017289          123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENV  202 (374)
Q Consensus       123 Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  202 (374)
                      |+  .+|.+++.++|+||..+|..|++.|+.|++|++|++|+|..-+...                     ..++.+.+ 
T Consensus       150 g~--~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~---------------------i~gF~am~-  205 (412)
T COG0304         150 GL--KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLG---------------------IAGFEAMR-  205 (412)
T ss_pred             CC--CCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHH---------------------HHHHHHHH-
Confidence            99  5899999999999999999999999999999999999987322000                     01111111 


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-  281 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-  281 (374)
                                           |..   ..   +         -+|..                        .+|| |++ 
T Consensus       206 ---------------------Als---t~---n---------d~p~~------------------------asrP-fd~~  224 (412)
T COG0304         206 ---------------------ALS---TR---N---------DDPEK------------------------ASRP-FDKN  224 (412)
T ss_pred             ---------------------Hhc---cC---C---------CCccc------------------------cCCC-CCCC
Confidence                                 000   00   0         02221                        1234 543 


Q ss_pred             -CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 017289          282 -DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDIN  355 (374)
Q Consensus       282 -~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID  355 (374)
                       +|++       +++||+++||++.|+|+++|.+++++|.|++..++     .|.+.+.+..+++++||++||++++|||
T Consensus       225 RdGfv-------~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~id  297 (412)
T COG0304         225 RDGFV-------IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDID  297 (412)
T ss_pred             CCCEE-------EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCC
Confidence             5888       99999999999999999999999999999998753     4666678889999999999999999999


Q ss_pred             EEEecCcch
Q 017289          356 LFEINEVLV  364 (374)
Q Consensus       356 ~~ei~d~Fa  364 (374)
                      |++.|---|
T Consensus       298 YinaHgTsT  306 (412)
T COG0304         298 YINAHGTST  306 (412)
T ss_pred             EEeCCCccC
Confidence            999997654

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.80  E-value=1.4e-18  Score=173.18  Aligned_cols=200  Identities=20%  Similarity=0.256  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC--eEEEEeecCCCC-----------C--------------cccHHHHHHHHcCCCCC
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVG--DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGFPET  127 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID--~vi~g~~~~~~~-----------~--------------~~~~a~~va~~~Gl~~~  127 (374)
                      ..|+..++++||+|||++..+-+  ++++|+..+...           .              ...++..++..+|+  .
T Consensus        84 ~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~--~  161 (418)
T PRK07910         84 QRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA--K  161 (418)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC--C
Confidence            45888899999999997432212  466666433210           0              01245667888898  5


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      +|.+++.++|+|++.||.+|++.|++|++|++||+|+|.... +..                    ..++      .+.|
T Consensus       162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~-~~~--------------------~~~f------~~~~  214 (418)
T PRK07910        162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIE-AVP--------------------IAGF------AQMR  214 (418)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHH--------------------HHHH------HhcC
Confidence            899999999999999999999999999999999999987543 100                    0000      0111


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCcc
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTT  285 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~l  285 (374)
                      ..                       +..       .  |          .++++.+            || |++  +|.+
T Consensus       215 ~~-----------------------ls~-------~--~----------~~~~~~~------------rP-Fd~~~~G~v  239 (418)
T PRK07910        215 IV-----------------------MST-------N--N----------DDPAGAC------------RP-FDKDRDGFV  239 (418)
T ss_pred             Cc-----------------------ccc-------C--C----------CCCCCCc------------CC-CcCCCCCEe
Confidence            00                       000       0  0          0111222            23 543  4666


Q ss_pred             ccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       286 t~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                             ++||++++||++++.|+++|.+++++|+|++..++     .|...+.+...++++||+++|++++|||++|.|
T Consensus       240 -------~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h  312 (418)
T PRK07910        240 -------FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH  312 (418)
T ss_pred             -------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence                   89999999999999999999999999999998753     233333455799999999999999999999999


Q ss_pred             Ccchh
Q 017289          361 EVLVP  365 (374)
Q Consensus       361 d~Fa~  365 (374)
                      .+.+.
T Consensus       313 gtgt~  317 (418)
T PRK07910        313 ATGTS  317 (418)
T ss_pred             CcCCC
Confidence            98874

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=99.80  E-value=1.5e-18  Score=172.60  Aligned_cols=202  Identities=25%  Similarity=0.385  Sum_probs=143.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~----vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      ...+|+.+++++||+|+|++++++|.    +++|+..+...                         ....++..++..+|
T Consensus        70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  149 (406)
T cd00834          70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG  149 (406)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence            45679999999999999999888774    66665432210                         01235778999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +  .+|.++++.+|+|++.+|..|+++|++|++|.+||+|+|.++. |..                    ..++      
T Consensus       150 l--~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~-p~~--------------------~~~~------  200 (406)
T cd00834         150 L--RGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALIT-PLT--------------------LAGF------  200 (406)
T ss_pred             C--CCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccC-HHH--------------------HHHH------
Confidence            9  4799999999999999999999999999999999999997653 110                    0000      


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      ...+.                        +...       ...|..            .+            +| |+.  
T Consensus       201 ~~~~~------------------------l~~~-------~~~p~~------------~~------------~p-f~~--  222 (406)
T cd00834         201 AALRA------------------------LSTR-------NDDPEK------------AS------------RP-FDK--  222 (406)
T ss_pred             HhcCC------------------------cCCC-------CCCCcc------------CC------------CC-CCC--
Confidence            00000                        0000       000100            01            11 211  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                         ..++..++|||+++||++++.|+++|.+++++|.|++...+     .|.....+...+++++|+++|++++|||+++
T Consensus       223 ---~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~  299 (406)
T cd00834         223 ---DRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYIN  299 (406)
T ss_pred             ---CCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEe
Confidence               11334489999999999999999999999999999987642     1222234557899999999999999999999


Q ss_pred             ecCcch
Q 017289          359 INEVLV  364 (374)
Q Consensus       359 i~d~Fa  364 (374)
                      .|...+
T Consensus       300 ~h~tgt  305 (406)
T cd00834         300 AHGTST  305 (406)
T ss_pred             cccccC
Confidence            998775

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.79  E-value=3.4e-18  Score=168.30  Aligned_cols=191  Identities=23%  Similarity=0.347  Sum_probs=137.4

Q ss_pred             HHHHHHHHHHHHcCCCcccc-CeEEEEeecCCCC--------------C--------------cccHHHHHHHHcCCCCC
Q 017289           77 LLAPVLKAVIEKTRLNPSEV-GDIVVGTVLAPGS--------------T--------------RAMECRMAAFYAGFPET  127 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~I-D~vi~g~~~~~~~--------------~--------------~~~~a~~va~~~Gl~~~  127 (374)
                      ++..++++||+|+|++.+.- =++++|+..+...              .              ...++..++..+|+  +
T Consensus        59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~--~  136 (381)
T PRK05952         59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGT--Q  136 (381)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCC--C
Confidence            66789999999999965221 1577776433210              0              01246778899999  5


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      +|.+++.++|+||+.||..|++.|++|++|++||+|+|...+ |..                    ..++      ...+
T Consensus       137 Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~-~~~--------------------~~~~------~~~~  189 (381)
T PRK05952        137 GPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPIT-PLT--------------------LAGF------QQMG  189 (381)
T ss_pred             CccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCC-HHH--------------------HHHH------HhcC
Confidence            899999999999999999999999999999999999986322 100                    0000      0000


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCcc
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTT  285 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~l  285 (374)
                      .                                                +.. +            ..+| |++  +|.+
T Consensus       190 ~------------------------------------------------ls~-~------------~~rP-fd~~r~G~v  207 (381)
T PRK05952        190 A------------------------------------------------LAK-T------------GAYP-FDRQREGLV  207 (381)
T ss_pred             C------------------------------------------------cCC-C------------CCCC-CCCCCCCcc
Confidence            0                                                000 0            1123 432  3555


Q ss_pred             ccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       286 t~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                             ++||++++||++++.|+++|.+++++|.|++...+     .|...+.+..+++++||+++||+++|||++|.|
T Consensus       208 -------~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~h  280 (381)
T PRK05952        208 -------LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAH  280 (381)
T ss_pred             -------ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEcc
Confidence                   89999999999999999999999999999997643     222333456799999999999999999999988


Q ss_pred             Ccchh
Q 017289          361 EVLVP  365 (374)
Q Consensus       361 d~Fa~  365 (374)
                      ..-+.
T Consensus       281 gtgt~  285 (381)
T PRK05952        281 GTATR  285 (381)
T ss_pred             CCCCC
Confidence            76643

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=99.79  E-value=4.6e-18  Score=169.78  Aligned_cols=198  Identities=23%  Similarity=0.337  Sum_probs=142.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC------------------CcccHHHHHHHHcCCCCCCCce
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLR  131 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~----vi~g~~~~~~~------------------~~~~~a~~va~~~Gl~~~~p~~  131 (374)
                      ..+|+.+|+++||+|+|++++++|.    +++|+..+...                  .....+..++..+|+  .+|.+
T Consensus        87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl--~g~~~  164 (421)
T cd00833          87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL--RGPSL  164 (421)
T ss_pred             HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC--CCCce
Confidence            4789999999999999999888774    66665432100                  012356778999999  47999


Q ss_pred             eecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHH
Q 017289          132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ  211 (374)
Q Consensus       132 ~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e  211 (374)
                      +++++|+|+..+|..|+++|++|.+|++||+|+|.+.. +..                     +.     .....|.   
T Consensus       165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~-~~~---------------------~~-----~~~~~~~---  214 (421)
T cd00833         165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILS-PDM---------------------FV-----GFSKAGM---  214 (421)
T ss_pred             eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCC-HHH---------------------HH-----HHhhCCC---
Confidence            99999999999999999999999999999999997543 100                     00     0000010   


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCC
Q 017289          212 EQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNAS  291 (374)
Q Consensus       212 ~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~  291 (374)
                                           +            +|            +..            .+| |+     ...++.
T Consensus       215 ---------------------l------------~~------------~~~------------~~p-f~-----~~~~g~  231 (421)
T cd00833         215 ---------------------L------------SP------------DGR------------CRP-FD-----ADADGY  231 (421)
T ss_pred             ---------------------C------------CC------------CCC------------CCC-CC-----CCCCCe
Confidence                                 0            00            000            112 21     112333


Q ss_pred             CcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC-----CCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhH
Q 017289          292 QVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV-----MGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPI  366 (374)
Q Consensus       292 ~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~-----~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~  366 (374)
                      .++|||+++||++++.|++.|.+++++|.|++........     ...+...++++||+++|++++|||++|.|...+..
T Consensus       232 ~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~  311 (421)
T cd00833         232 VRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPL  311 (421)
T ss_pred             eeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCC
Confidence            4899999999999999999999999999999876432111     12234689999999999999999999999988653

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=99.78  E-value=4.3e-18  Score=169.63  Aligned_cols=204  Identities=20%  Similarity=0.206  Sum_probs=140.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC--eEEEEeecCC-------------CCC-----------cccHHHHHHHHcCCCCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG--DIVVGTVLAP-------------GST-----------RAMECRMAAFYAGFPET  127 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID--~vi~g~~~~~-------------~~~-----------~~~~a~~va~~~Gl~~~  127 (374)
                      ..+|+..++++||+|+|+++.+.+  ++++|.....             ...           ...++..++..+|+  +
T Consensus        80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl--~  157 (410)
T PRK07103         80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGI--R  157 (410)
T ss_pred             HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCC--C
Confidence            567999999999999999643222  4555543210             000           01246678899999  5


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      +|.+++.++|+|+..+|..|+++|++|++|.+||+|++...+ +..                    ..++.      ..|
T Consensus       158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~-~~~--------------------~~~~~------~~~  210 (410)
T PRK07103        158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLS-YWE--------------------CQALR------SLG  210 (410)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCC-HHH--------------------HHHHH------Hcc
Confidence            799999999999999999999999999999999999874221 000                    00100      000


Q ss_pred             C-CHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccc
Q 017289          208 V-TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTT  286 (374)
Q Consensus       208 ~-t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt  286 (374)
                      . +..                    .+          ..||...                        .+| |+.     
T Consensus       211 ~l~~~--------------------~~----------~~~p~~~------------------------~rP-fd~-----  230 (410)
T PRK07103        211 AMGSD--------------------RF----------ADEPEAA------------------------CRP-FDQ-----  230 (410)
T ss_pred             ccccC--------------------cc----------CCCcccC------------------------cCC-CCC-----
Confidence            0 000                    00          0023221                        123 332     


Q ss_pred             cCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC---CCCCCHHHHHHHHHHHcCCCCCCccEEEecCcc
Q 017289          287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL  363 (374)
Q Consensus       287 ~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~---~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~F  363 (374)
                      ..++..++||++++||++++.|+++|.+++++|.|++...+...   ....+...++++||++||++++|||++|.|..+
T Consensus       231 ~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtg  310 (410)
T PRK07103        231 DRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTG  310 (410)
T ss_pred             CCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCC
Confidence            13455589999999999999999999999999999998643211   112234689999999999999999999999999


Q ss_pred             hhH
Q 017289          364 VPI  366 (374)
Q Consensus       364 a~~  366 (374)
                      +..
T Consensus       311 t~~  313 (410)
T PRK07103        311 SPL  313 (410)
T ss_pred             CCC
Confidence            863

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.78  E-value=7.3e-18  Score=166.67  Aligned_cols=195  Identities=13%  Similarity=0.040  Sum_probs=136.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCCC-------------------------------------cc
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGST-------------------------------------RA  112 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~~-------------------------------------~~  112 (374)
                      ...|+..++++||+|||++..+.|    ++++|+..+....                                     ..
T Consensus        73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n  152 (398)
T PRK06519         73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN  152 (398)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence            456888999999999999654332    4677765432100                                     01


Q ss_pred             cHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCC
Q 017289          113 MECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCL  192 (374)
Q Consensus       113 ~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
                      .++..++..+|+  ++|.+++.++|+||..||..|+++|++|++|++||+|+|.... +.                    
T Consensus       153 ~~a~~is~~~gl--~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~-~~--------------------  209 (398)
T PRK06519        153 LLAGNISIVHKV--TGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAER-PD--------------------  209 (398)
T ss_pred             HHHHHHHHHhCC--CCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HH--------------------
Confidence            256778899999  5899999999999999999999999999999999999997433 10                    


Q ss_pred             CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH
Q 017289          193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL  272 (374)
Q Consensus       193 ~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~  272 (374)
                         .+..   ....|...                       .+..        .|.                        
T Consensus       210 ---~~~~---~~~~~~ls-----------------------~~~~--------~p~------------------------  228 (398)
T PRK06519        210 ---MLLL---YELGGLLL-----------------------KGGW--------APV------------------------  228 (398)
T ss_pred             ---HHHH---HHHcCccC-----------------------CCCC--------Cch------------------------
Confidence               0000   00001000                       0000        000                        


Q ss_pred             hcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCC
Q 017289          273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID  352 (374)
Q Consensus       273 ~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~  352 (374)
                      ...+| -+.+|.+       ++|||++|||++++.|+++|.+++++|.|++... ++. ...+..+++++||++||+ ++
T Consensus       229 ~d~~~-~~r~G~v-------~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~-~~~-~~~~~~~am~~AL~~Agl-~~  297 (398)
T PRK06519        229 WSRGG-EDGGGFI-------LGSGGAFLVLESREHAEARGARPYARISGVESDR-ARR-APGDLEASLERLLKPAGG-LA  297 (398)
T ss_pred             hccCc-cCCCCee-------eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC-CCC-ChHHHHHHHHHHHHHCCC-cc
Confidence            00011 1123666       8999999999999999999999999999997432 232 223557899999999999 89


Q ss_pred             CccEEEecCcc
Q 017289          353 DINLFEINEVL  363 (374)
Q Consensus       353 DID~~ei~d~F  363 (374)
                      ||||++.|-.=
T Consensus       298 ~IdyI~ahgtg  308 (398)
T PRK06519        298 APTAVISGATG  308 (398)
T ss_pred             cCCEEEeCCCC
Confidence            99999998543

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.77  E-value=9.6e-18  Score=166.68  Aligned_cols=198  Identities=19%  Similarity=0.273  Sum_probs=140.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCc-cccC----eEEEEeecCCCC--------------C-----------cccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNP-SEVG----DIVVGTVLAPGS--------------T-----------RAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~-~~ID----~vi~g~~~~~~~--------------~-----------~~~~a~~va~~~G  123 (374)
                      ...|+..++++||+|||+.. ..++    ++++|+..+...              .           ...++..++..+|
T Consensus        73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~  152 (405)
T PRK09116         73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG  152 (405)
T ss_pred             HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence            35688899999999999843 2222    677776443210              0           0124677889999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +  .+|.+++.++|+||..|+..|+++|++|++|++||+|+|..+...                      ..++..   +
T Consensus       153 ~--~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~----------------------~~~f~~---l  205 (405)
T PRK09116        153 L--KGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTE----------------------AAVFDT---L  205 (405)
T ss_pred             C--CCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHH----------------------HHHHHH---h
Confidence            9  589999999999999999999999999999999999998643200                      000000   0


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--  281 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--  281 (374)
                      ..  .+..           +                     ..|            +..            .+| |+.  
T Consensus       206 ~~--~~~~-----------~---------------------~~~------------~~~------------~rP-fd~~~  226 (405)
T PRK09116        206 FA--TSTR-----------N---------------------DAP------------ELT------------PRP-FDANR  226 (405)
T ss_pred             hh--hccC-----------C---------------------CCC------------CCC------------CCC-CcCCC
Confidence            00  0000           0                     011            111            123 432  


Q ss_pred             CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCC---CCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          282 DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM---GIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       282 ~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~---~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                      +|.+       ++||++++||++++.|+++|.+++++|.|++.+.+.....   ..+...+++++|+++|++++|||+++
T Consensus       227 ~G~v-------~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~  299 (405)
T PRK09116        227 DGLV-------IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVN  299 (405)
T ss_pred             CCEe-------eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEE
Confidence            4666       8999999999999999999999999999999865332211   12346899999999999999999999


Q ss_pred             ecCcch
Q 017289          359 INEVLV  364 (374)
Q Consensus       359 i~d~Fa  364 (374)
                      .|..-+
T Consensus       300 ~Hgtgt  305 (405)
T PRK09116        300 AHGTAT  305 (405)
T ss_pred             CcCccC
Confidence            998765

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=99.77  E-value=1.5e-17  Score=165.08  Aligned_cols=197  Identities=19%  Similarity=0.281  Sum_probs=141.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-----------Cc--------------ccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------TR--------------AMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-----------~~--------------~~~a~~va~~~Gl  124 (374)
                      ...|+..++++||+|+|++++.++    +|++|+..+...           .+              ..++..++..+|+
T Consensus        71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (399)
T cd00832          71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM  150 (399)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence            457889999999999999876554    577776543210           00              1245678899999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                        .+|++++.++|+||+.||..|++.|++|+ |++||+|+|...+ |.                       .+..   ..
T Consensus       151 --~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~-p~-----------------------~~~~---~~  200 (399)
T cd00832         151 --RGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALC-PW-----------------------GWVA---QL  200 (399)
T ss_pred             --CCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccC-HH-----------------------HHHH---HH
Confidence              58999999999999999999999999999 9999999987433 10                       0000   00


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D  282 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~  282 (374)
                      +.|.                        +...        .+|            ++.            .|| |+.  +
T Consensus       201 ~~~~------------------------ls~~--------~~p------------~~~------------~rP-Fd~~~~  223 (399)
T cd00832         201 SSGR------------------------LSTS--------DDP------------ARA------------YLP-FDAAAA  223 (399)
T ss_pred             hccc------------------------cCCC--------CCC------------CCC------------cCC-CcCCCC
Confidence            0010                        0000        011            111            233 443  4


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC--CCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV--MGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~--~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                      |.+       ++||+++|||++++.|+++|.+++++|.|++...+....  ...+..+++++||+++|++++||||++.|
T Consensus       224 G~~-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~h  296 (399)
T cd00832         224 GYV-------PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFAD  296 (399)
T ss_pred             CEe-------eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEec
Confidence            666       899999999999999999999999999999986432211  22345699999999999999999999999


Q ss_pred             Ccch
Q 017289          361 EVLV  364 (374)
Q Consensus       361 d~Fa  364 (374)
                      -.-+
T Consensus       297 gtgt  300 (399)
T cd00832         297 AAGV  300 (399)
T ss_pred             cCcC
Confidence            6543

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.77  E-value=2.1e-17  Score=164.49  Aligned_cols=197  Identities=21%  Similarity=0.299  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~----vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ..+|+..++++||+|+|++++++|.    +++|...+...                         ....++..++..+|+
T Consensus        72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  151 (406)
T PRK08439         72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL  151 (406)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence            4679999999999999999877773    55544322110                         011356778999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                        .+|.+++.++|+|+..+|..|+++|++|++|.+||+|+|.... |..                    ..++.      
T Consensus       152 --~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~-~~~--------------------~~~f~------  202 (406)
T PRK08439        152 --KGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAIC-PVG--------------------IGGFA------  202 (406)
T ss_pred             --CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccC-HHH--------------------HHHHH------
Confidence              5899999999999999999999999999999999999997432 100                    00000      


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--C
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--D  282 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~  282 (374)
                      +.+.                        +..       ...+|            +..+            +| |+.  +
T Consensus       203 ~~~~------------------------ls~-------~~~~p------------~~~~------------rp-fd~~~~  226 (406)
T PRK08439        203 AMKA------------------------LST-------RNDDP------------KKAS------------RP-FDKDRD  226 (406)
T ss_pred             HhCc------------------------ccc-------CCCCC------------ccCc------------CC-ccCCCC
Confidence            0000                        000       00011            1111            23 432  3


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCC---CCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG---IGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~---~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                      |.+       ++||++++||++++.|+++|.+++++|.|++..++......   .+..+++++||+++|+  +||||+|.
T Consensus       227 G~v-------~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~  297 (406)
T PRK08439        227 GFV-------MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINA  297 (406)
T ss_pred             cEE-------eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEc
Confidence            555       89999999999999999999999999999987643211111   2446899999999998  89999999


Q ss_pred             cCcch
Q 017289          360 NEVLV  364 (374)
Q Consensus       360 ~d~Fa  364 (374)
                      |-.-+
T Consensus       298 hgtgt  302 (406)
T PRK08439        298 HGTST  302 (406)
T ss_pred             cCCcC
Confidence            97654

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.75  E-value=4.8e-17  Score=162.78  Aligned_cols=162  Identities=24%  Similarity=0.285  Sum_probs=116.1

Q ss_pred             HHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCC
Q 017289          114 ECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLL  193 (374)
Q Consensus       114 ~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~  193 (374)
                      ++..++..+|+  ++|+++++++|+|+..||..|+++|++|++|.+||+|+|...+ +.                     
T Consensus       154 ~a~~i~~~~gl--~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~-~~---------------------  209 (425)
T PRK06501        154 IADRLADRFGT--RGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVS-AE---------------------  209 (425)
T ss_pred             HHHHHHHHhCC--CCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HH---------------------
Confidence            46678889999  5899999999999999999999999999999999999985322 00                     


Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHh
Q 017289          194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA  273 (374)
Q Consensus       194 ~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~  273 (374)
                        .+..-..+..  ++.                      ..           ++           .++.           
T Consensus       210 --~~~~~~~~~~--ls~----------------------~~-----------~~-----------~~~~-----------  230 (425)
T PRK06501        210 --ALIRFSLLSA--LST----------------------QN-----------DP-----------PEKA-----------  230 (425)
T ss_pred             --HHHHHHHhhc--ccc----------------------CC-----------CC-----------CCcc-----------
Confidence              0000000000  000                      00           00           0111           


Q ss_pred             cCCCcccC--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC-----CCCCCHHHHHHHHHHH
Q 017289          274 KLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS-----VMGIGPAVAIPAAVKS  346 (374)
Q Consensus       274 ~~~pi~~~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~-----~~~~~~~~A~~~Al~~  346 (374)
                       .|| |+.  +|.+       ++||++++||++++.|+++|.+++++|.|++...+...     ....+...++++||++
T Consensus       231 -~rp-fd~~r~G~v-------~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~  301 (425)
T PRK06501        231 -SKP-FSKDRDGFV-------MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALAD  301 (425)
T ss_pred             -cCC-CCCCCCCee-------eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence             233 432  3444       79999999999999999999999999999987643221     1122346899999999


Q ss_pred             cCCCCCCccEEEecCcchhHH
Q 017289          347 AGLQIDDINLFEINEVLVPII  367 (374)
Q Consensus       347 AGl~~~DID~~ei~d~Fa~~~  367 (374)
                      +|++++|||+++.|...+...
T Consensus       302 agi~p~dId~i~~Hgtgt~~~  322 (425)
T PRK06501        302 AGLTPEQIDYINAHGTSTPEN  322 (425)
T ss_pred             cCCCHHHcCEEEecCccCcch
Confidence            999999999999999987653

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.71  E-value=3.6e-16  Score=155.32  Aligned_cols=194  Identities=14%  Similarity=0.242  Sum_probs=135.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC---------------C-----------cccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS---------------T-----------RAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~---------------~-----------~~~~a~~va~~~G  123 (374)
                      ...++..|+++||+|+|+++++++    ++++|+..+...               .           ..+++..++..+|
T Consensus        71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~  150 (406)
T PRK07967         71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK  150 (406)
T ss_pred             HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence            456888999999999999765444    566665322210               0           0135677899999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +  ++|.+++.++|+||+.||..|+++|++|++|++||+|+|..+. +.                     ..++.     
T Consensus       151 l--~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~-~~---------------------~~~f~-----  201 (406)
T PRK07967        151 I--KGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDW-EM---------------------SCLFD-----  201 (406)
T ss_pred             C--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCh-HH---------------------HHHHH-----
Confidence            9  5899999999999999999999999999999999999986432 00                     00000     


Q ss_pred             HHhCC-CHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-
Q 017289          204 QRFGV-TRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-  281 (374)
Q Consensus       204 ~~~G~-t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-  281 (374)
                       ..|. +..                     .            |          .+++..+            || |+. 
T Consensus       202 -~~~~ls~~---------------------~------------~----------~~p~~~~------------rP-Fd~~  224 (406)
T PRK07967        202 -AMGALSTK---------------------Y------------N----------DTPEKAS------------RA-YDAN  224 (406)
T ss_pred             -HhhhhccC---------------------C------------C----------CCCCcCC------------cC-CcCC
Confidence             0000 000                     0            0          0111222            23 443 


Q ss_pred             -CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC---CCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          282 -DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV---MGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       282 -~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~---~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                       +|++       ++||++++||++++.|+++|.+++++|.|++...+....   .+.+..+++++||+.++  + ||||+
T Consensus       225 r~G~v-------~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi  294 (406)
T PRK07967        225 RDGFV-------IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYI  294 (406)
T ss_pred             CCcee-------eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEE
Confidence             4666       899999999999999999999999999999986532221   22344689999998654  5 99999


Q ss_pred             EecCcc
Q 017289          358 EINEVL  363 (374)
Q Consensus       358 ei~d~F  363 (374)
                      +.|-.=
T Consensus       295 ~aHgtG  300 (406)
T PRK07967        295 NTHGTS  300 (406)
T ss_pred             EcCCCC
Confidence            998543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.70  E-value=2.8e-16  Score=182.24  Aligned_cols=189  Identities=20%  Similarity=0.222  Sum_probs=138.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-------------------------------------------
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPG-------------------------------------------  108 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~-------------------------------------------  108 (374)
                      .|+.+++++||+|||+..+ .+    +|++|...+..                                           
T Consensus        95 rl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (2582)
T TIGR02813        95 LLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWE  173 (2582)
T ss_pred             HHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhcccccccC
Confidence            4788999999999999543 33    57777543210                                           


Q ss_pred             ---CC---cccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhh
Q 017289          109 ---ST---RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKV  182 (374)
Q Consensus       109 ---~~---~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~  182 (374)
                         ..   ...++..++..+||  ++|.++|+++|+|++.||+.|++.|++|+||++|++|++...+ |..         
T Consensus       174 ~~~~~g~~~n~~A~RIS~~f~L--~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~-p~~---------  241 (2582)
T TIGR02813       174 ENSFPGSLGNVISGRIANRFDL--GGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS-PFM---------  241 (2582)
T ss_pred             ccccccccccHHHHHHHHHhCC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC-HHH---------
Confidence               00   01246778999999  5899999999999999999999999999999999999986432 110         


Q ss_pred             hhhcccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCC
Q 017289          183 EIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDG  262 (374)
Q Consensus       183 ~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~  262 (374)
                                 .+++      .+.|                                                .++.|+.
T Consensus       242 -----------~~~f------s~~~------------------------------------------------~lS~~g~  256 (2582)
T TIGR02813       242 -----------YMSF------SKTP------------------------------------------------AFTTNED  256 (2582)
T ss_pred             -----------HHHH------Hhcc------------------------------------------------CcCCCCC
Confidence                       0000      0000                                                0122222


Q ss_pred             CCCCCCHHHHhcCCCcccC--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCC--CCC---CCC
Q 017289          263 IRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP--SVM---GIG  335 (374)
Q Consensus       263 ~r~~~t~e~~~~~~pi~~~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p--~~~---~~~  335 (374)
                      +|            | |+.  +|++       ++||+++|||.+.+.|++.|.+++++|.|++.+.+..  ...   ..+
T Consensus       257 cr------------p-FD~~adG~v-------~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~g  316 (2582)
T TIGR02813       257 IQ------------P-FDIDSKGMM-------IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEG  316 (2582)
T ss_pred             cc------------C-CCCCCCccc-------ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHH
Confidence            32            2 443  4666       8999999999999999999999999999999875432  111   123


Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEecCc
Q 017289          336 PAVAIPAAVKSAGLQIDDINLFEINEV  362 (374)
Q Consensus       336 ~~~A~~~Al~~AGl~~~DID~~ei~d~  362 (374)
                      ..+++++||++||++++||||+|.|-.
T Consensus       317 q~~~i~~Al~~Agi~p~~I~yIeaHGT  343 (2582)
T TIGR02813       317 QAKALKRAYDDAGFAPHTCGLIEAHGT  343 (2582)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEecCC
Confidence            468999999999999999999999954

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.68  E-value=7e-16  Score=150.46  Aligned_cols=190  Identities=21%  Similarity=0.209  Sum_probs=134.7

Q ss_pred             CCHHHHHHHHHHHHHHHcC-CCccccCeEEEEeecC--CCC-C-cccHHHHHHHHcCCCCCCCceeecccCchHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTR-LNPSEVGDIVVGTVLA--PGS-T-RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVAD  146 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAG-l~~~~ID~vi~g~~~~--~~~-~-~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~  146 (374)
                      .+..+|+.+|++++|++++ +++++||.+++.....  ... . .......++..+|++...+.+++.++|+||..+|..
T Consensus        63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~  142 (348)
T PRK06147         63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQ  142 (348)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHH
Confidence            3677899999999999999 7888999877643210  100 0 112355678889985457889999999999999999


Q ss_pred             HHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Q 017289          147 VATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAA  226 (374)
Q Consensus       147 Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~  226 (374)
                      |++.|++|++|.+||+|+|.++.....                     ..+..                         ..
T Consensus       143 A~~~i~~G~~~~~lvgg~d~~~~~~~~---------------------~~~~~-------------------------~~  176 (348)
T PRK06147        143 ARRLIAAGGCPRVLVAGVDSLLTGPTL---------------------AHYEA-------------------------RD  176 (348)
T ss_pred             HHHHHHcCCCCEEEEEeeccccCHHHH---------------------HHHHH-------------------------hh
Confidence            999999999999999999987641100                     00000                         00


Q ss_pred             HHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHH
Q 017289          227 ATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRS  306 (374)
Q Consensus       227 ~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~  306 (374)
                           .+                       ++.|                   ..+|.+       ++|||+++||++++
T Consensus       177 -----~l-----------------------~~~~-------------------~~~G~v-------~GEGA~a~vLe~~~  202 (348)
T PRK06147        177 -----RL-----------------------LTSQ-------------------NSNGFI-------PGEAAAAVLLGRPA  202 (348)
T ss_pred             -----cc-----------------------CCCC-------------------CCCcee-------eeceEEEEEEccHh
Confidence                 00                       0000                   012444       89999999999999


Q ss_pred             HHHHcCCCceEEEEEEEEeccCC------CCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcc
Q 017289          307 LAVQKGLPILGVFRSFSAVGVDP------SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL  363 (374)
Q Consensus       307 ~A~~~g~~p~a~i~g~~~~~~~p------~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~F  363 (374)
                      .|++.+.++++  .|++......      ...+.+..+++++||+++|++++|||+++.|-.-
T Consensus       203 ~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~g  263 (348)
T PRK06147        203 GGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNG  263 (348)
T ss_pred             hhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCC
Confidence            99999988776  5555432211      1123345699999999999999999999988653

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=99.65  E-value=2.3e-15  Score=143.42  Aligned_cols=117  Identities=21%  Similarity=0.269  Sum_probs=100.1

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ..+-+|..  +|...++ .-...+....+|+.+|+++||++||++++|||.||+.+..+... .+..+..++..||+. +
T Consensus        29 tsdewI~~--rtGir~R-~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~-~Ps~A~~vq~~LG~~-~  103 (323)
T COG0332          29 TSDEWIET--RTGIRER-RIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHL-FPSTACLVQARLGLG-G  103 (323)
T ss_pred             CCcceeee--ecCCcee-eecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccC-CChHHHHHHHHhCCC-C
Confidence            34567774  5665432 22234788999999999999999999999999999998887764 567899999999996 6


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .+++.++.+|++...++..|...|++|.++.+||+|.|.+|+
T Consensus       104 ~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~  145 (323)
T COG0332         104 APAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSR  145 (323)
T ss_pred             cceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhc
Confidence            899999999999999999999999999999999999999865

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.63  E-value=3.4e-15  Score=143.81  Aligned_cols=109  Identities=20%  Similarity=0.260  Sum_probs=91.8

Q ss_pred             cccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccC
Q 017289           58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC  137 (374)
Q Consensus        58 ~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~ac  137 (374)
                      +|++.++ ....++.+..+|+.+|++++|+++|+++++||.+++++..+... .+..+..++..+|+. +.++++++++|
T Consensus        37 ~~gi~~r-~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~-~~~~~~~i~~~lG~~-~~~~~~v~~~C  113 (319)
T PRK09352         37 RTGIKER-RIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYA-FPSTACLVQARLGAK-NAAAFDLSAAC  113 (319)
T ss_pred             hcCeEEE-EeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CchHHHHHHHHhCCC-CCcEeeccccc
Confidence            4555432 23346789999999999999999999999999999987765432 345677899999994 67999999999


Q ss_pred             chHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       138 aSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      +||..+|..|++.|++|.++.+||+|+|+++.
T Consensus       114 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~  145 (319)
T PRK09352        114 SGFVYALSTADQFIRSGAYKNVLVIGAEKLSR  145 (319)
T ss_pred             hhHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence            99999999999999999999999999998754

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.61  E-value=7.2e-15  Score=144.78  Aligned_cols=94  Identities=12%  Similarity=0.105  Sum_probs=81.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ...+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++  .++++++.+|+||..+|..|++.|+
T Consensus        94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~-~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~  170 (372)
T PRK07515         94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRA-YPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIR  170 (372)
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999987654322 334567788999994  6899999999999999999999999


Q ss_pred             cCCCCEEEEEeeccCCC
Q 017289          153 AGLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~  169 (374)
                      +|.++.|||+|+|.++.
T Consensus       171 ~g~~~~vLvv~~e~~s~  187 (372)
T PRK07515        171 SGSARRVLVVNPEICSG  187 (372)
T ss_pred             cCCCCEEEEEeeecccc
Confidence            99999999999998653

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.61  E-value=1.6e-14  Score=157.97  Aligned_cols=188  Identities=24%  Similarity=0.285  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHcCCCccccC----eEEEEeecCCCCCc------------------ccHHHHHHHHcCCCCCCCceeec
Q 017289           77 LLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGSTR------------------AMECRMAAFYAGFPETVPLRTVN  134 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~~~------------------~~~a~~va~~~Gl~~~~p~~~v~  134 (374)
                      |..+.+++||+|||+.++.+.    +|+.|....+....                  ...+..++..+|+  .+|.+.|+
T Consensus        94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l--~GPs~~vd  171 (1061)
T COG3321          94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL--SGPSVTVD  171 (1061)
T ss_pred             HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC--CCCCcccc
Confidence            899999999999999998887    57777654433210                  1246678899999  59999999


Q ss_pred             ccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHHHH
Q 017289          135 RQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD  214 (374)
Q Consensus       135 ~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~~~  214 (374)
                      ++|+|++.|+++|++.|++|+||++|++|+..+.+.....                                .+++.   
T Consensus       172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~--------------------------------~~~~~---  216 (1061)
T COG3321         172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSY--------------------------------LFSAG---  216 (1061)
T ss_pred             chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCccee--------------------------------eeecc---
Confidence            9999999999999999999999999999997654411110                                00000   


Q ss_pred             HHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCccccCCCCC
Q 017289          215 LAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQ  292 (374)
Q Consensus       215 ~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~lt~~~~~~  292 (374)
                                                              -.+.+|..++.             |+.  +|++       
T Consensus       217 ----------------------------------------g~ls~~g~c~~-------------fd~~adG~v-------  236 (1061)
T COG3321         217 ----------------------------------------GMLSPDGRCKA-------------FDADADGYV-------  236 (1061)
T ss_pred             ----------------------------------------cCcCCCCccee-------------cccCCCCEE-------
Confidence                                                    01222222321             322  4666       


Q ss_pred             cCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC-----CCCCHHHHHHHHHHHcCCCCCCccEEEecC
Q 017289          293 VSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV-----MGIGPAVAIPAAVKSAGLQIDDINLFEINE  361 (374)
Q Consensus       293 ~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~-----~~~~~~~A~~~Al~~AGl~~~DID~~ei~d  361 (374)
                      .++|+++|||...+.|.+-|+++++.|.|.+...+.-..     ...+....+++||+++|+.|++|+|+|.|=
T Consensus       237 ~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHg  310 (1061)
T COG3321         237 RGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHG  310 (1061)
T ss_pred             EeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecC
Confidence            889999999999999999999999999999986533111     112346899999999999999999999995

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=99.58  E-value=1.5e-14  Score=136.43  Aligned_cols=92  Identities=18%  Similarity=0.298  Sum_probs=80.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|++++|||.+++|....    ...++..++..+|+    |.+.++++|+|+..++..|+.
T Consensus        46 ~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~----Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~  117 (327)
T TIGR02845        46 WEKAERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN----QIITANFVARDLGI----PFLGLYGACSTSMETLALGAM  117 (327)
T ss_pred             cchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC----cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHH
Confidence            3457788999999999999999999999999987421    23467788899987    569999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.+|.|||++.|..++
T Consensus       118 lI~SG~ad~VLVV~Ssh~S~  137 (327)
T TIGR02845       118 LVDGGFADRVLAATSSHYAT  137 (327)
T ss_pred             HHhCCCCCEEEEEEecccch
Confidence            99999999999999988765

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=99.57  E-value=4.1e-14  Score=136.29  Aligned_cols=99  Identities=18%  Similarity=0.275  Sum_probs=87.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH
Q 017289           69 FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA  148 (374)
Q Consensus        69 ~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa  148 (374)
                      ..+.++.+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ +.|+++++.+|++|..+|..|+
T Consensus        46 ~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~-~~~~a~~l~~~lGl~-~~~~~~v~~~C~s~~~al~~A~  123 (318)
T TIGR00747        46 ADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHA-FPSAACMVQAYLGIK-GIPAFDLSAACAGFIYALSVAK  123 (318)
T ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CChHHHHHHHHhCCC-CCcEeehhhhhHHHHHHHHHHH
Confidence            46788999999999999999999999999999988765432 345678899999996 5799999999999999999999


Q ss_pred             HHHHcCCCCEEEEEeeccCCC
Q 017289          149 TAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       149 ~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      ..|++|.++.+||+|+|.++.
T Consensus       124 ~~i~~g~~~~~Lvv~~e~~~~  144 (318)
T TIGR00747       124 QYIESGKYKTVLVVGAEKLSS  144 (318)
T ss_pred             HHHHcCCCCEEEEEEehhhcC
Confidence            999999999999999998653

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=99.56  E-value=8.5e-14  Score=134.73  Aligned_cols=109  Identities=18%  Similarity=0.196  Sum_probs=92.0

Q ss_pred             ecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeeccc
Q 017289           57 YRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQ  136 (374)
Q Consensus        57 g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~a  136 (374)
                      -+|++.++ ....++.+..+|+.+|+++||+++|+++++||.+++++..+...  ...+..++..+|+. +.+++.++.+
T Consensus        35 ~~~gi~~r-~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~--~~~~~~v~~~Lg~~-~~~~~~v~~~  110 (326)
T CHL00203         35 TRTGIKKR-HLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDL--FGSASQLQAEIGAT-RAVAFDITAA  110 (326)
T ss_pred             eccCeEEE-EeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC--CchHHHHHHHhCCC-CCceeeeccc
Confidence            56777552 34456788999999999999999999999999999997655432  22456788899996 6889999999


Q ss_pred             CchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          137 CSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       137 caSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      |+||..++..|.+.|++|.++.+||+|+|.++.
T Consensus       111 Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~  143 (326)
T CHL00203        111 CSGFILALVTATQFIQNGSYKNILVVGADTLSK  143 (326)
T ss_pred             chhHHHHHHHHHHHHHcCCCCEEEEEEehhhhC
Confidence            999999999999999999999999999998764

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.55  E-value=5.5e-14  Score=135.78  Aligned_cols=98  Identities=17%  Similarity=0.262  Sum_probs=86.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ +.+++.++.+|+++..+|..|..
T Consensus        49 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~a~~l~~~lg~~-~~~~~~v~~~C~~~~~al~~A~~  126 (325)
T PRK12879         49 VEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYL-FPSTASQVQARLGIP-NAAAFDINAACAGFLYGLETANG  126 (325)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEEEECccchHHHHHHHHHHH
Confidence            4577899999999999999999999999999987654432 456788899999996 57899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+||+++|.++.
T Consensus       127 ~l~~g~~~~~Lvv~~e~~s~  146 (325)
T PRK12879        127 LITSGLYKKVLVIGAERLSK  146 (325)
T ss_pred             HHHcCCCCEEEEEEehhhcC
Confidence            99999999999999998754

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.55  E-value=6.3e-14  Score=136.20  Aligned_cols=99  Identities=18%  Similarity=0.224  Sum_probs=88.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.++.+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++.+.+++.++.+|+++..++..|..
T Consensus        57 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~  135 (338)
T PRK09258         57 EGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYL-EPATACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAAN  135 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHH
Confidence            3678999999999999999999999999999988765443 456788899999997557899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+||+++|..+.
T Consensus       136 ~i~~g~~~~~Lvv~~e~~s~  155 (338)
T PRK09258        136 MIELGQIDYALVVSGESARE  155 (338)
T ss_pred             HHHcCCCCEEEEEEecccch
Confidence            99999999999999998764

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=99.55  E-value=4.5e-14  Score=136.17  Aligned_cols=109  Identities=12%  Similarity=0.218  Sum_probs=96.4

Q ss_pred             EEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee
Q 017289           53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT  132 (374)
Q Consensus        53 IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~  132 (374)
                      -+|+.+..|..      .+.+..+|+.+|++++|+++|+++++||.+++++..+... .+..+..++..+|++ ..++++
T Consensus        33 ~~gi~~r~~~~------~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~i~~~lg~~-~~~~~~  104 (324)
T cd00827          33 TTGIGQRHMAG------DDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDK-GKSAATYLAELLGLT-NAEAFD  104 (324)
T ss_pred             eeecceeEecC------CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CccHHHHHHHHcCCC-CCceee
Confidence            47888888764      4688999999999999999999999999999988765442 456788899999996 789999


Q ss_pred             ecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       133 v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      ++.+|+|+..++..|++.|++|.++.+||+++|+++.
T Consensus       105 v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~  141 (324)
T cd00827         105 LKQACYGGTAALQLAANLVESGPWRYALVVASDIASY  141 (324)
T ss_pred             hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhh
Confidence            9999999999999999999999999999999998765

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.55  E-value=8e-14  Score=135.00  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=85.4

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC-CCCceeecccCchHHHHHHHHHH
Q 017289           71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE-TVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        71 ~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~-~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      +.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++. ..++++++.+|+++..++..|..
T Consensus        49 ~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~-~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~  127 (329)
T PRK07204         49 GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQA-IPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISY  127 (329)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHH
Confidence            567899999999999999999999999999987654432 3456788999999963 36899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+||++.|.++.
T Consensus       128 ~l~~g~~~~~Lvv~~e~~s~  147 (329)
T PRK07204        128 AIECGRYKRVLIISSEISSV  147 (329)
T ss_pred             HHHCCCCCEEEEEEeccccC
Confidence            99999999999999998653

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=99.55  E-value=1.1e-13  Score=133.25  Aligned_cols=98  Identities=17%  Similarity=0.199  Sum_probs=87.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.++.+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++ +.++++++.+|+++..++..|..
T Consensus        46 ~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~-~~~~~~~l~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~  123 (320)
T cd00830          46 PGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYL-FPATACLVQARLGAK-NAAAFDINAACSGFLYGLSTAAG  123 (320)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEeeccccchHHHHHHHHHHH
Confidence            4578999999999999999999999999999987665432 356788899999996 78999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      +|++|.++.+||+++|.++.
T Consensus       124 ~i~~g~~~~vLvv~~e~~s~  143 (320)
T cd00830         124 LIRSGGAKNVLVVGAETLSR  143 (320)
T ss_pred             HHHcCCCCEEEEEEehhhcc
Confidence            99999999999999998754

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK08304 stage V sporulation protein AD; Validated

Probab=99.54  E-value=6.5e-14  Score=132.45  Aligned_cols=91  Identities=19%  Similarity=0.342  Sum_probs=80.2

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHH
Q 017289           71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATA  150 (374)
Q Consensus        71 ~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~  150 (374)
                      +.+..+|+.+|+++||+++|++++|||.+++|....    ....+..++..+|+    |.+.++.+|+|+..++..|+..
T Consensus        53 EkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~----Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l  124 (337)
T PRK08304         53 EKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN----QIISANFAARELGI----PFLGLYGACSTMMESLALGSML  124 (337)
T ss_pred             cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC----CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence            467788999999999999999999999999997521    23456677888886    7999999999999999999999


Q ss_pred             HHcCCCCEEEEEeeccCCC
Q 017289          151 IKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       151 I~sG~~d~vLv~G~E~~s~  169 (374)
                      |++|.+|.|||++.|.+++
T Consensus       125 I~SG~ad~VLVV~Ssh~s~  143 (337)
T PRK08304        125 IDGGFADRVLAATSSHFAT  143 (337)
T ss_pred             HhcCCCCEEEEEEcchhhh
Confidence            9999999999999988766

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.52  E-value=2.4e-13  Score=134.22  Aligned_cols=96  Identities=15%  Similarity=0.203  Sum_probs=83.9

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      .+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..+...+|++ +.+++.++.+|+|+..++..|...|
T Consensus        61 ~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~-~~~~~~v~~~Cas~~~al~~A~~~i  138 (378)
T PRK06816         61 HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQL-MPGHASMVHGELGAP-PIEVVSSAGVCAAGMMALKYAYLSV  138 (378)
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcC-ChHHHHHHHhhCCCC-CCceeeecCcCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999998765422 223345678889996 5799999999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|.++.+||+|+|.++.
T Consensus       139 ~sg~~~~vLvv~~E~~s~  156 (378)
T PRK06816        139 KAGESRNAVATASELASR  156 (378)
T ss_pred             HCCCCCEEEEEeEccchh
Confidence            999999999999999875

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=99.52  E-value=2.6e-13  Score=132.28  Aligned_cols=98  Identities=14%  Similarity=0.319  Sum_probs=85.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.++.+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++.+.+++.++.+|+++..++..|..
T Consensus        46 ~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~-~p~~a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~  124 (345)
T TIGR00748        46 LDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYA-VKPTATIVAEAIGATPDLTAADLEFACKAGTAGIQACMG  124 (345)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-ccchHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999987554432 344566788999996467899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCC
Q 017289          150 AIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s  168 (374)
                      .|++|.++.+||++.|.++
T Consensus       125 ~i~sg~~~~vLVv~~d~~~  143 (345)
T TIGR00748       125 LVASGMIKYGLAIGADTAQ  143 (345)
T ss_pred             HHHcCCCCEEEEEEEeecc
Confidence            9999999999999999764

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK04262 hypothetical protein; Provisional

Probab=99.49  E-value=3.9e-13  Score=131.25  Aligned_cols=96  Identities=17%  Similarity=0.327  Sum_probs=84.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.+++++..+... .+..+..++..+|++...+++.++.+|+++..++..|..
T Consensus        47 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~  125 (347)
T PRK04262         47 PDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYA-VKPTATIVAEALGATPDLTAADLEFACKAGTAALQAAMG  125 (347)
T ss_pred             CCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcc-cccHHHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999887654432 344566888999996457889999999999999999999


Q ss_pred             HHHcCCCCEEEEEeecc
Q 017289          150 AIKAGLYDIGIAAGLES  166 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~  166 (374)
                      .|++|.++.+||++.|.
T Consensus       126 ~i~sg~~~~aLVv~~e~  142 (347)
T PRK04262        126 LVKSGMIKYALAIGADT  142 (347)
T ss_pred             HHHcCCCCEEEEEEEee
Confidence            99999999999999986

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=99.48  E-value=4.2e-13  Score=132.55  Aligned_cols=97  Identities=15%  Similarity=0.178  Sum_probs=85.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.+++++..+...  ...+..++..+|++ +.+++.++.+|+++..+|..|.+
T Consensus        92 ~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~--~~~a~~v~~~LG~~-~~~~~dv~~~Ca~~~~aL~~A~~  168 (379)
T PLN02326         92 GDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDL--FGSAPQVQAALGCT-NALAFDLTAACSGFVLGLVTAAR  168 (379)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcc--CcHHHHHHHHhCCC-CCceeeccccchHHHHHHHHHHH
Confidence            4678999999999999999999999999999987654332  23566789999996 78999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+||+|.|.++.
T Consensus       169 ~l~~g~~~~vLVv~~e~~s~  188 (379)
T PLN02326        169 FIRGGGYKNVLVIGADALSR  188 (379)
T ss_pred             HHHcCCCCEEEEEEechhcC
Confidence            99999999999999998764

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.46  E-value=1.6e-12  Score=128.93  Aligned_cols=145  Identities=23%  Similarity=0.424  Sum_probs=102.9

Q ss_pred             HHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCC
Q 017289          114 ECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLL  193 (374)
Q Consensus       114 ~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~  193 (374)
                      ++..++..+|+  ++|.+++.++|+|+..+|..|++.|++|++|.|||+|+|..+.  ..        +           
T Consensus       139 ~a~~ia~~lgl--~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~--~~--------~-----------  195 (392)
T PRK09185        139 LADFLRAYLGL--SGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCR--LT--------L-----------  195 (392)
T ss_pred             HHHHHHHHhCC--CCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccCh--HH--------H-----------
Confidence            56778999999  4799999999999999999999999999999999999986432  00        0           


Q ss_pred             chHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH
Q 017289          194 PMGITSENVAQRFG-VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL  272 (374)
Q Consensus       194 ~~~~~a~~~~~~~G-~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~  272 (374)
                       .++      ...+ +++                                                  +.          
T Consensus       196 -~~~------~~~~~l~~--------------------------------------------------~~----------  208 (392)
T PRK09185        196 -NGF------NSLESLSP--------------------------------------------------QP----------  208 (392)
T ss_pred             -HHH------HhccccCC--------------------------------------------------Cc----------
Confidence             000      0000 000                                                  00          


Q ss_pred             hcCCCcccC--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHH
Q 017289          273 AKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVK  345 (374)
Q Consensus       273 ~~~~pi~~~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~  345 (374)
                        .+| |+.  +|.+       ++||+++|||++++      ..+ ++|.|++...+.     |.....+..+++++||+
T Consensus       209 --~~P-fd~~~~G~~-------~gEGaa~vVLe~~~------~~~-~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~  271 (392)
T PRK09185        209 --CRP-FSANRDGIN-------IGEAAAFFLLERED------DAA-VALLGVGESSDAHHMSAPHPEGLGAILAMQQALA  271 (392)
T ss_pred             --cCC-CcCCCCccc-------eeceEEEEEEEEcC------CCc-EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence              011 211  2333       78999999999871      123 489999876432     22222344689999999


Q ss_pred             HcCCCCCCccEEEecCcchh
Q 017289          346 SAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       346 ~AGl~~~DID~~ei~d~Fa~  365 (374)
                      +||++++|||+++.|...+.
T Consensus       272 ~Agl~~~dId~v~~hgtgt~  291 (392)
T PRK09185        272 DAGLAPADIGYINLHGTATP  291 (392)
T ss_pred             HcCCCHHHccEEEeCCCCCc
Confidence            99999999999999998875

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.43  E-value=1.7e-12  Score=126.99  Aligned_cols=98  Identities=10%  Similarity=0.082  Sum_probs=87.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .+..+..++..||++.+.+++.++.+|+++..++..|..
T Consensus        56 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~-~P~~a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~  134 (353)
T PRK12880         56 ENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFF-MPSTACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHS  134 (353)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHH
Confidence            4567899999999999999999999999999998876554 567889999999997677899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|..+ +||++.|..|.
T Consensus       135 ~i~~~~~~-~LVv~~e~~S~  153 (353)
T PRK12880        135 LIQSGLGK-ILLICGDTLSK  153 (353)
T ss_pred             HHHcCCCC-EEEEEehhhhc
Confidence            99999999 99999887653

>PRK06840 hypothetical protein; Validated

Probab=99.42  E-value=5.5e-12  Score=122.70  Aligned_cols=98  Identities=8%  Similarity=-0.010  Sum_probs=82.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEee-cCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTV-LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA  148 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~-~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa  148 (374)
                      .+.+..+|+.+|+++||+++|+++++||.+++.+. .+... .+..+..++..+|++ +.+++.++.+|+++..++..|.
T Consensus        49 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~-~p~~a~~l~~~lGl~-~~~~~~v~~~C~~~~~al~~A~  126 (339)
T PRK06840         49 PEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYP-VWSSAPKIQHEIGAK-NAWAFDIMAVCASFPIALKVAK  126 (339)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCC-CCchHHHHHHHhCCC-CcccccccccchHHHHHHHHHH
Confidence            45789999999999999999999999999986533 22221 334577899999996 6789999999999999999999


Q ss_pred             HHHHc-CCCCEEEEEeeccCCC
Q 017289          149 TAIKA-GLYDIGIAAGLESMTV  169 (374)
Q Consensus       149 ~~I~s-G~~d~vLv~G~E~~s~  169 (374)
                      +.|++ |.++.+||++.|..+.
T Consensus       127 ~~l~~~g~~~~~Lvv~~~~~s~  148 (339)
T PRK06840        127 DLLYSDPSIENVLLVGGYRNSD  148 (339)
T ss_pred             HHHhcCCCccEEEEEeeccccc
Confidence            99999 9999999999987543

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=99.40  E-value=2.6e-12  Score=126.06  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=84.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeec-ccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~-~acaSg~~ai~~Aa~~I  151 (374)
                      ...+|+.+|+++||+++|+++++||.+++++..+.  ..+.++..+...+|++.+.+++.++ .+|+++..++..|...|
T Consensus        84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~--~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~  161 (361)
T cd00831          84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTGN--PTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLL  161 (361)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCC--CCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHH
Confidence            57899999999999999999999999999876542  2456778899999996558889998 89999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|..+.+||+++|.++.
T Consensus       162 ~~~~~~~aLvv~~e~~s~  179 (361)
T cd00831         162 EANPGARVLVVSTELCSL  179 (361)
T ss_pred             HHCCCCEEEEEEeecccc
Confidence            999999999999998765

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.38  E-value=6.4e-12  Score=121.56  Aligned_cols=96  Identities=13%  Similarity=0.097  Sum_probs=84.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.++.+|+.+|+++||+++|+++++||.|++++..+... .+..+..++..+|++ +.+++.++.+|+++..++..|..
T Consensus        48 ~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~-~p~~a~~v~~~Lg~~-~~~~~di~~~C~g~~~aL~~A~~  125 (326)
T PRK05963         48 PDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHL-LPPSAPLLAHRLGLQ-NSGAIDLAGACAGFLYALVLADG  125 (326)
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCcHHHHHHHHhCCC-CCceeeccchhhHHHHHHHHHHH
Confidence            4678899999999999999999999999999988765432 355677899999996 67899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCC
Q 017289          150 AIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s  168 (374)
                      .|++|. +.+||+++|..+
T Consensus       126 ~l~~~~-~~aLVv~~d~~s  143 (326)
T PRK05963        126 FVRAQG-KPVLVVAANILS  143 (326)
T ss_pred             HHHcCC-CeEEEEEechhh
Confidence            999985 899999998754

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=99.38  E-value=1.2e-11  Score=122.16  Aligned_cols=110  Identities=7%  Similarity=0.052  Sum_probs=94.3

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP  129 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p  129 (374)
                      +.++.|.|++.+...    ..+.+..+|+.+|+++||+++  ++++||.+++++..+... .+..+..+...+|++..++
T Consensus        29 ~~~~~g~G~~~~~~~----~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~-~~s~a~~v~~~Lgl~~~~~  101 (379)
T TIGR01835        29 EKFHIGIGQKKMAVP----PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQ-SKAAAVYVHGLLGLQPFCR  101 (379)
T ss_pred             HHHHhhcCceEEeeC----CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCce
Confidence            456788888887642    246678999999999999999  799999999998765532 3567889999999975688


Q ss_pred             ceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeecc
Q 017289          130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES  166 (374)
Q Consensus       130 ~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~  166 (374)
                      ++.+..+|.+|..++..|...|++|..+.+||+++|.
T Consensus       102 ~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~  138 (379)
T TIGR01835       102 SFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI  138 (379)
T ss_pred             EEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence            9999999999999999999999999999999999985

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>PRK12404 stage V sporulation protein AD; Provisional

Probab=99.36  E-value=4.4e-12  Score=119.41  Aligned_cols=85  Identities=19%  Similarity=0.271  Sum_probs=73.8

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      +...+|+.+|++.||+++|++++|||.+++|+....    ..++..++..+|+    |.+.+.++|+|+..++..|+..|
T Consensus        52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ----~ipssfvar~LGI----P~~gV~gACSTg~eAL~lAa~~V  123 (334)
T PRK12404         52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ----ITPTSFAARTLGI----PYLGLFGACSTSMEGLALAALIV  123 (334)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC----cCcHHHHHHHhCC----CccceeecCHHHHHHHHHHHHHH
Confidence            345679999999999999999999999999987622    2455678888886    56899999999999999999999


Q ss_pred             HcCCCCEEEEEee
Q 017289          152 KAGLYDIGIAAGL  164 (374)
Q Consensus       152 ~sG~~d~vLv~G~  164 (374)
                      ++|.+|.||++-.
T Consensus       124 aSG~Ad~VLavts  136 (334)
T PRK12404        124 NSGGAKYVLTGAS  136 (334)
T ss_pred             HcCCCCEEEEEeC
Confidence            9999999999754

>PLN03169 chalcone synthase family protein; Provisional

Probab=99.24  E-value=9.2e-11  Score=116.21  Aligned_cols=95  Identities=12%  Similarity=0.006  Sum_probs=81.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC-CceeecccCchHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATA  150 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~-p~~~v~~acaSg~~ai~~Aa~~  150 (374)
                      ....+|+.+|+++||+++|+++++||.||+++.. .. ..+..+..++..||++... .++.++.+|+++..++..|...
T Consensus       104 e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~-~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~  181 (391)
T PLN03169        104 EAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EA-RLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDI  181 (391)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CC-CCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHH
Confidence            4567899999999999999999999999988763 32 2456678899999996433 3688999999999999999999


Q ss_pred             HHcCCCCEEEEEeeccCC
Q 017289          151 IKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       151 I~sG~~d~vLv~G~E~~s  168 (374)
                      |++|..+.|||+++|..+
T Consensus       182 ~~~~~~~~vLvv~~e~~s  199 (391)
T PLN03169        182 AENNPGSRVLLTTSETTI  199 (391)
T ss_pred             HHhCCCCeEEEEEEEcCh
Confidence            999999999999999854

>PLN03173 chalcone synthase; Provisional

Probab=99.23  E-value=9e-11  Score=116.05  Aligned_cols=93  Identities=11%  Similarity=-0.006  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC-CceeecccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~-p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ..+|+.+|+++||+++|++++|||.|++.+..+..  .+..+..++..+|++... ..+.++.+|+++..++..|...++
T Consensus       102 a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~  179 (391)
T PLN03173        102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE  179 (391)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--ccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence            45899999999999999999999999988765532  456788899999996433 356789999999999999999999


Q ss_pred             cCCCCEEEEEeeccCC
Q 017289          153 AGLYDIGIAAGLESMT  168 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s  168 (374)
                      +|....|||+++|.+|
T Consensus       180 ~~~~~~vLVV~~E~~S  195 (391)
T PLN03173        180 NNKGARVLVVCSEITA  195 (391)
T ss_pred             hCCCCeEEEEEEehhh
Confidence            9999999999999866

>PLN03170 chalcone synthase; Provisional

Probab=99.21  E-value=9.2e-11  Score=116.42  Aligned_cols=94  Identities=13%  Similarity=0.023  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC-CceeecccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~-p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ..+|+.+|+++||+++|++++|||.||+.+..+..  .+.++.+++..||++... .++.++.+|+++..+|..|...++
T Consensus       106 a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~  183 (401)
T PLN03170        106 VPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE  183 (401)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC--CChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence            45799999999999999999999999887765422  466788999999997433 368899999999999999999999


Q ss_pred             cCCCCEEEEEeeccCCC
Q 017289          153 AGLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~  169 (374)
                      +|....|||+++|..+.
T Consensus       184 ~~~~~~vLVV~~E~~S~  200 (401)
T PLN03170        184 NNRGARVLVVCSEITAV  200 (401)
T ss_pred             cCCCCeEEEEEEehhhh
Confidence            99999999999998764

>PLN03172 chalcone synthase family protein; Provisional

Probab=99.20  E-value=1.2e-10  Score=115.16  Aligned_cols=93  Identities=11%  Similarity=-0.001  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC-ceeecccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ..+|+.+|+++||+++|+++++||.||+++..+..  .+..+..++..+|++.... .+.++.+|+++..+|..|...++
T Consensus       102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~  179 (393)
T PLN03172        102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAE  179 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHH
Confidence            35899999999999999999999999887765532  4567889999999974443 36789999999999999999999


Q ss_pred             cCCCCEEEEEeeccCC
Q 017289          153 AGLYDIGIAAGLESMT  168 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s  168 (374)
                      +|....|||+++|..|
T Consensus       180 ~~~~~~vLVV~~E~~S  195 (393)
T PLN03172        180 NNAGSRVLVVCSEITA  195 (393)
T ss_pred             cCCCCeEEEEEEehhh
Confidence            9999999999999876

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=99.20  E-value=1.7e-10  Score=115.52  Aligned_cols=109  Identities=13%  Similarity=0.180  Sum_probs=88.5

Q ss_pred             EEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHH---HHcCCCCCCC
Q 017289           53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA---FYAGFPETVP  129 (374)
Q Consensus        53 IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va---~~~Gl~~~~p  129 (374)
                      .+|.++..+.-    .-.+.+..+|+++|++.+|+++|+++++||.|++++..+... .+..+..+.   ..+|.+ ++.
T Consensus        36 ~~GI~~r~~av----a~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~-~ps~A~~v~~ll~~LG~~-~~~  109 (459)
T PLN02577         36 TIGLGQDCMAF----CTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEESGNT-DIE  109 (459)
T ss_pred             hhccceeEecc----CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCchHHHHHHHHHHhCCC-CcE
Confidence            35666655421    125678999999999999999999999999999998776432 445566554   567875 789


Q ss_pred             ceeecccCchHHHHHHHHHHHHHcCCC--CEEEEEeeccC
Q 017289          130 LRTVNRQCSSGLQAVADVATAIKAGLY--DIGIAAGLESM  167 (374)
Q Consensus       130 ~~~v~~acaSg~~ai~~Aa~~I~sG~~--d~vLv~G~E~~  167 (374)
                      ++.++.+|.++..+|..|...|++|..  +.+||+|+|..
T Consensus       110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a  149 (459)
T PLN02577        110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSA  149 (459)
T ss_pred             EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechh
Confidence            999999999999999999999999985  99999999864

>PLN03171 chalcone synthase-like protein; Provisional

Probab=99.19  E-value=2.5e-10  Score=113.35  Aligned_cols=95  Identities=14%  Similarity=0.011  Sum_probs=82.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC-CceeecccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~-p~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      +..+|+.+|+++||+++|+++++||.|++++..+..  .+..+..+...+|++... ..+.+..+|+++..+|..|...|
T Consensus       107 ~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~--~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li  184 (399)
T PLN03171        107 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH--IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLA  184 (399)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC--CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHH
Confidence            578999999999999999999999999998877653  456788899999996332 24566779999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|..+.|||+++|..+.
T Consensus       185 ~~~~~~~vLVv~~e~~s~  202 (399)
T PLN03171        185 ENNRGARVLVVAAEITLL  202 (399)
T ss_pred             HhCCCCeEEEEEEecccc
Confidence            999999999999998764

>PLN02854 3-ketoacyl-CoA synthase

Probab=99.18  E-value=9.6e-10  Score=111.20  Aligned_cols=92  Identities=16%  Similarity=0.248  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeec-ccCchHHHHHHHHHHHHHc
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIKA  153 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~-~acaSg~~ai~~Aa~~I~s  153 (374)
                      +.+...++.++|+++|++++|||.||+.++ +.. ..+.++..+...+|++.++.++.++ .+|++|..+|..|.+.+++
T Consensus       189 ~~v~~~~~~~lL~kaGi~p~dID~LIv~cS-~~~-p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~  266 (521)
T PLN02854        189 EAVMFGALDSLFSKTGVKPRDIGILIVNCS-LFN-PTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKA  266 (521)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCC-CCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence            456778889999999999999999998644 322 2467889999999997678899998 8999999999999999999


Q ss_pred             CCCCEEEEEeeccCC
Q 017289          154 GLYDIGIAAGLESMT  168 (374)
Q Consensus       154 G~~d~vLv~G~E~~s  168 (374)
                      |....+||+++|.++
T Consensus       267 ~~~~~aLVVstE~~S  281 (521)
T PLN02854        267 NPNSYAVVVSTENIT  281 (521)
T ss_pred             CCCCeEEEEEEeeee
Confidence            999999999999876

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=99.17  E-value=1.2e-10  Score=108.44  Aligned_cols=92  Identities=23%  Similarity=0.385  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC-----eEEEEeecCCC-------------C----------CcccHHHHHHHHcCCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG-----DIVVGTVLAPG-------------S----------TRAMECRMAAFYAGFP  125 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID-----~vi~g~~~~~~-------------~----------~~~~~a~~va~~~Gl~  125 (374)
                      ...|+..++++||+|+|++..+++     ++++|+..+..             .          ....++..++..+|+ 
T Consensus        87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl-  165 (254)
T PF00109_consen   87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL-  165 (254)
T ss_dssp             HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred             hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC-
Confidence            457899999999999999885443     47777665521             0          011246788999999 


Q ss_pred             CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccC
Q 017289          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM  167 (374)
Q Consensus       126 ~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~  167 (374)
                       .+|.++++++|+||+.+|..|+++|++|++|++||+|+|..
T Consensus       166 -~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~  206 (254)
T PF00109_consen  166 -RGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAP  206 (254)
T ss_dssp             --SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--
T ss_pred             -CCccccccccccccccccchhcccccccccccccccccccc
Confidence             58999999999999999999999999999999999999954

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=99.16  E-value=3.2e-11  Score=99.58  Aligned_cols=60  Identities=38%  Similarity=0.599  Sum_probs=49.6

Q ss_pred             CCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhhh
Q 017289          313 LPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIM  372 (374)
Q Consensus       313 ~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~~  372 (374)
                      ++|+++|++++..+.+|..+..+|..|++++|+++|++++|||++|+||+|+++++.++.
T Consensus         1 l~pla~i~~~~~~~~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~~~~   60 (123)
T PF02803_consen    1 LKPLARIVGYASAGVDPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLAFLE   60 (123)
T ss_dssp             --ESEEEEEEEEEE--GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHHHHH
T ss_pred             CCeEEEEEEEEEEecCHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHHhhc
Confidence            368999999999999999999999999999999999999999999999999999998763

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>PLN02932 3-ketoacyl-CoA synthase

Probab=99.11  E-value=6.3e-10  Score=111.80  Aligned_cols=94  Identities=13%  Similarity=0.252  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeec-ccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~-~acaSg~~ai~~Aa~~I~  152 (374)
                      ..+|+.+|+++||+++|++++|||.||+.+..+.  ..+..+..+...+|++.++..+.++ .+|++|..+|..|.+.++
T Consensus       148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~--~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~  225 (478)
T PLN02932        148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN--PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ  225 (478)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC--CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence            5689999999999999999999999999887765  2567889999999997678999999 899999999999999999


Q ss_pred             cCCCCEEEEEeeccCCC
Q 017289          153 AGLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~  169 (374)
                      +|....+||+++|.+|.
T Consensus       226 ~~~~~~aLVVstE~~S~  242 (478)
T PLN02932        226 VHRNTYALVVSTENITQ  242 (478)
T ss_pred             cCCCCeEEEEEEeeccc
Confidence            99999999999999875

>PLN02377 3-ketoacyl-CoA synthase

Probab=99.05  E-value=2.4e-09  Score=108.21  Aligned_cols=95  Identities=17%  Similarity=0.211  Sum_probs=82.9

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeec-ccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~-~acaSg~~ai~~Aa~~I  151 (374)
                      ...+|+..|+++||+++|++++|||.+++ +..+.. ..+..+..++..+|++.++.++.++ .+|++|..+|..|.+.+
T Consensus       171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~-~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll  248 (502)
T PLN02377        171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFN-PTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDML  248 (502)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCC-CCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHH
Confidence            35679999999999999999999999988 333332 2467789999999997678999999 69999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|....+||+++|.++.
T Consensus       249 ~~~~~~~aLVVstE~~S~  266 (502)
T PLN02377        249 QVHRNTYAVVVSTENITQ  266 (502)
T ss_pred             HcCCCCEEEEEEEecccc
Confidence            999999999999998764

>PLN02192 3-ketoacyl-CoA synthase

Probab=99.00  E-value=3e-09  Score=107.44  Aligned_cols=93  Identities=15%  Similarity=0.256  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeec-ccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~-~acaSg~~ai~~Aa~~I~  152 (374)
                      .+.++.+|+++||+++|++++|||.||+.+.. .. ..+.++..+...+|++.+++++.++ .+|++|..+|..|.+.++
T Consensus       176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~-~~-~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~  253 (511)
T PLN02192        176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCSL-FN-PTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQ  253 (511)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCC-CC-CCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHH
Confidence            35688999999999999999999999987542 22 2467788999999997578999999 699999999999999999


Q ss_pred             cCCCCEEEEEeeccCC
Q 017289          153 AGLYDIGIAAGLESMT  168 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s  168 (374)
                      +|....+||+++|.++
T Consensus       254 a~~~~~aLVVstE~~S  269 (511)
T PLN02192        254 VHPNSYALVISMENIT  269 (511)
T ss_pred             cCCCCeEEEEEEEecc
Confidence            9999999999999887

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=98.97  E-value=1.3e-08  Score=97.98  Aligned_cols=110  Identities=15%  Similarity=0.263  Sum_probs=91.6

Q ss_pred             EEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce
Q 017289           52 VIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR  131 (374)
Q Consensus        52 ~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~  131 (374)
                      +..|.+.+.+.-.    -.+.+..-|+++|++.+|+++++++.+|+.|++|+-..... .-..+..++..+|+++...++
T Consensus        33 ~~~gl~~~e~sv~----~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~-~K~~at~v~~~lg~~~~~~~~  107 (377)
T COG3425          33 IKKGLGVEEKSVP----PWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDA-VKPTATIVAEALGLNPSARAA  107 (377)
T ss_pred             hhhccccccccCC----CCchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCccc-ccchHHHHHHHhCCCCceehh
Confidence            4556666655321    24667888999999999999999999999999997654322 334688999999998888888


Q ss_pred             eecccCchHHHHHHHHHHHHHcCCCCEEEEEeecc
Q 017289          132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLES  166 (374)
Q Consensus       132 ~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~  166 (374)
                      .+..+|-+|..+|+.|...|.+|.-+.+||+|.+.
T Consensus       108 d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~  142 (377)
T COG3425         108 DVEFACYAGTAALQAAIGWVESGMISYGLVIGADT  142 (377)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehh
Confidence            89999999999999999999999999999999875

>PLN03168 chalcone synthase; Provisional

Probab=98.92  E-value=5.3e-09  Score=103.53  Aligned_cols=95  Identities=17%  Similarity=0.085  Sum_probs=83.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC-CceeecccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV-PLRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~-p~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      ...+|+.+|+++||+++|++++|||.||+++..+..  .+..+..++..+|++... .++.++.+|+++..++..|...|
T Consensus       100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~--~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i  177 (389)
T PLN03168        100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN--MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLA  177 (389)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCC--CccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHH
Confidence            356899999999999999999999999998876632  467788999999996432 37899999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|....|||+++|.+|.
T Consensus       178 ~~~~~~~VLVV~~E~~S~  195 (389)
T PLN03168        178 ENNKGARVLAVASEVTAV  195 (389)
T ss_pred             HhCCCCEEEEEEEehhhh
Confidence            999999999999998764

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.87  E-value=5e-09  Score=110.67  Aligned_cols=187  Identities=24%  Similarity=0.286  Sum_probs=125.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCCCc------------------ccHHHHHHHHcCCCCCCCce
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGSTR------------------AMECRMAAFYAGFPETVPLR  131 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~~~------------------~~~a~~va~~~Gl~~~~p~~  131 (374)
                      ...|..|+.++|+-||||+|.+..    ++++|+..+...+.                  ...+..++..+.+  .+|.+
T Consensus        87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf--qGPS~  164 (2376)
T KOG1202|consen   87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDF--QGPSF  164 (2376)
T ss_pred             HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEec--cCCch
Confidence            356999999999999999998876    57777655432200                  0122334444566  68999


Q ss_pred             eecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHH
Q 017289          132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQ  211 (374)
Q Consensus       132 ~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e  211 (374)
                      .++++|+|+..++..|.+.|++|+||.+||.|+...-. |                      .+.+.+.    |.|+   
T Consensus       165 s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLk-P----------------------t~slQFl----RLgm---  214 (2376)
T KOG1202|consen  165 SVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILK-P----------------------TTSLQFL----RLGM---  214 (2376)
T ss_pred             hhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEec-c----------------------chhhHHH----HhcC---
Confidence            99999999999999999999999999999999865432 1                      0111111    1111   


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCccccCC
Q 017289          212 EQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGN  289 (374)
Q Consensus       212 ~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~lt~~~  289 (374)
                                                                   ++.|..++.             |+.  +|+.    
T Consensus       215 ---------------------------------------------ls~dGsCka-------------FDeagnGY~----  232 (2376)
T KOG1202|consen  215 ---------------------------------------------LSPDGSCKA-------------FDEAGNGYC----  232 (2376)
T ss_pred             ---------------------------------------------cCCCCcccc-------------hhccCCcee----
Confidence                                                         222222221             321  2333    


Q ss_pred             CCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC----CCC--CCHHHHHHHHHHHcCCCCCCccEEEecC
Q 017289          290 ASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS----VMG--IGPAVAIPAAVKSAGLQIDDINLFEINE  361 (374)
Q Consensus       290 ~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~----~~~--~~~~~A~~~Al~~AGl~~~DID~~ei~d  361 (374)
                         .+||-++++|.....||+.    ++.|+-..+..+.-.    .++  ....+-++..|+.+|+.|+++-|+|.|-
T Consensus       233 ---Rseg~~avllqrk~~ArRv----YAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHG  303 (2376)
T KOG1202|consen  233 ---RSEGVVAVLLQRKSLARRV----YATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHG  303 (2376)
T ss_pred             ---ecCceEEEEEehhHHHHHH----HHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEecc
Confidence               7899999999999999874    445554443322111    122  2235778999999999999999999994

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=98.68  E-value=1e-07  Score=95.59  Aligned_cols=108  Identities=13%  Similarity=0.120  Sum_probs=88.1

Q ss_pred             EEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHH---cCCCCCCC
Q 017289           53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFY---AGFPETVP  129 (374)
Q Consensus        53 IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~---~Gl~~~~p  129 (374)
                      .+|.++..+.-.    ..+.+..+|+..|++.+|+++++++++||.|++|+..+... .+..+..+...   +|.+ ++.
T Consensus        33 ~~GI~~rr~av~----~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~-sps~a~~v~~lL~~lG~~-~~~  106 (454)
T TIGR01833        33 TIGLGQTKMGFC----TDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDK-SKSVKTVLMQLFEESGNT-DVE  106 (454)
T ss_pred             eechhheecccC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCC-CCchHHHHHHHHHhcCCC-Cce
Confidence            467777663211    25788999999999999999999999999999988766543 34556666664   4564 788


Q ss_pred             ceeecccCchHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q 017289          130 LRTVNRQCSSGLQAVADVATAIKAGL--YDIGIAAGLES  166 (374)
Q Consensus       130 ~~~v~~acaSg~~ai~~Aa~~I~sG~--~d~vLv~G~E~  166 (374)
                      ++.+..+|.++..+|..|...|++|.  .+.+||+++|.
T Consensus       107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi  145 (454)
T TIGR01833       107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI  145 (454)
T ss_pred             EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence            99999999999999999999999997  49999999998

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.57  E-value=1e-06  Score=82.10  Aligned_cols=93  Identities=14%  Similarity=0.095  Sum_probs=77.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce-eecccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-TVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~-~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ...|..+++++||+.+++.++|||.|++.++.+-.  .+.+-..+...+|+++...-+ .-.-||+.|..++..|....+
T Consensus        76 a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~--~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r  153 (356)
T COG3424          76 AVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLA--TPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR  153 (356)
T ss_pred             HHHHHHHHHHHHhccCCCCHHHCcEEEEEeecccc--CCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence            45699999999999999999999999998876554  345556778899997544333 245689999999999999999


Q ss_pred             cCCCCEEEEEeeccCC
Q 017289          153 AGLYDIGIAAGLESMT  168 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s  168 (374)
                      +.-...||++.+|.-|
T Consensus       154 a~P~~~vlvV~vELCS  169 (356)
T COG3424         154 AAPDANVLVVCVELCS  169 (356)
T ss_pred             hCccceEEEEEeeeee
Confidence            9989999999999765

>PLN00415 3-ketoacyl-CoA synthase

Probab=98.44  E-value=1e-06  Score=87.94  Aligned_cols=96  Identities=21%  Similarity=0.251  Sum_probs=80.0

Q ss_pred             CCHHHHHHH-HHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecc-cCchHHHHHHHHHH
Q 017289           72 TLADDLLAP-VLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNR-QCSSGLQAVADVAT  149 (374)
Q Consensus        72 ~s~~eLa~~-A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~-acaSg~~ai~~Aa~  149 (374)
                      +...|++.. |+++||+++|+++++||.||+.++ +.. ..+.++..+...+|++.++..+.++. +|++|..++..|..
T Consensus       131 ~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T-~~~-~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~  208 (466)
T PLN00415        131 RHESELVIFGALNSLFKKTGIEPREVGIFIVNCS-LFN-PNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATN  208 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECc-CCC-CCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHH
Confidence            445566654 788899999999999999886542 321 24567888999999977888999997 99999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .++++....+||+++|..+.
T Consensus       209 ll~a~~~~~aLVVs~E~~S~  228 (466)
T PLN00415        209 LLKANPNTYAVIVSTENMTL  228 (466)
T ss_pred             HHHhCCCCEEEEEEEecccc
Confidence            99999999999999999774

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=98.44  E-value=8.8e-07  Score=82.68  Aligned_cols=82  Identities=20%  Similarity=0.313  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcC
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAG  154 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG  154 (374)
                      ..|..+|++.||+++++.++|||.++.|.-....    ..+...+..+++    |.+-+-.+|++...++..|+..|..|
T Consensus        52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~----i~s~f~ar~l~i----Pf~GlygACST~~e~l~laa~~vdgg  123 (329)
T PF07451_consen   52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI----ISSSFAARDLGI----PFLGLYGACSTMMESLALAAMLVDGG  123 (329)
T ss_dssp             HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC----CHHHHHHHHHT------EEEB--CCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh----HHHHHHHHhcCC----CccchhhHHHHHHHHHHHHHHHHhCC
Confidence            4588999999999999999999999998755332    234556666666    68889999999999999999999999


Q ss_pred             CCCEEEEEee
Q 017289          155 LYDIGIAAGL  164 (374)
Q Consensus       155 ~~d~vLv~G~  164 (374)
                      -++.||++-.
T Consensus       124 ~a~~vla~tS  133 (329)
T PF07451_consen  124 FADYVLAATS  133 (329)
T ss_dssp             S-SEEEEEEE
T ss_pred             CcceEEEEec
Confidence            9999998754

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=98.43  E-value=7e-08  Score=95.68  Aligned_cols=105  Identities=19%  Similarity=0.093  Sum_probs=79.2

Q ss_pred             ccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEE
Q 017289          244 IVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFS  323 (374)
Q Consensus       244 ~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~  323 (374)
                      ..||++++++            +++++++++++++.   +|++++|||+.+||++++++++++.+   +    .++.|.+
T Consensus       186 ~~np~a~~~~------------eI~~~~v~~~~~~~---dp~~r~d~~~~~dg~a~l~~a~~~~~---g----~~tagna  243 (392)
T COG0183         186 AANPKAGFFD------------EITPEDVLNSPVVA---DPLRRLDCSPTSDGAAALVPAFEEVG---G----TVTAGNA  243 (392)
T ss_pred             HhhHhcCCCC------------ceeeEEecCCceec---CCcccCCCCCChhhhcCceeccccCC---c----eEEEecc
Confidence            4589999764            37788888887665   89999999999999999999998753   1    3666655


Q ss_pred             EeccCCC----C-------CCCCHHHHHHHHHHHcCCCCC--CccEEEecCcchhHHHHh
Q 017289          324 AVGVDPS----V-------MGIGPAVAIPAAVKSAGLQID--DINLFEINEVLVPIIAAN  370 (374)
Q Consensus       324 ~~~~~p~----~-------~~~~~~~A~~~Al~~AGl~~~--DID~~ei~d~Fa~~~l~~  370 (374)
                      ..-.+..    .       .......|..++|+++|++|.  ++|+.++||||+...+.+
T Consensus       244 s~i~dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv~p~~~~~~v~av~~~~~~~~l~~  303 (392)
T COG0183         244 SGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLA  303 (392)
T ss_pred             cccccHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCCCcccccCCHHHHHHHHHHcCCch
Confidence            3222211    0       011234778899999999998  999999999999988773

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=98.26  E-value=6.8e-06  Score=74.89  Aligned_cols=95  Identities=13%  Similarity=0.110  Sum_probs=74.1

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce-eecccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-TVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~-~v~~acaSg~~ai~~Aa~~I  151 (374)
                      ...+|+.+|+++||+++|+++++|+.||+.+.++..  .+.+-..+...+||++.+.-+ ....||..|..+|..|....
T Consensus        99 ~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~--~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~  176 (226)
T PF00195_consen   99 EAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA--APGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA  176 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE--CS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC--CCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence            356799999999999999999999999998776543  345667888999997544433 36779999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++..-..|||+.+|..|.
T Consensus       177 ~~~p~a~VLvv~vElcsl  194 (226)
T PF00195_consen  177 RANPGARVLVVCVELCSL  194 (226)
T ss_dssp             HHSTT-EEEEEEEEEGGG
T ss_pred             hCCccceEEEEEEEeeEE
Confidence            998899999999997653

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=98.18  E-value=1.3e-05  Score=75.18  Aligned_cols=94  Identities=18%  Similarity=0.241  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee-ecccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT-VNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~-v~~acaSg~~ai~~Aa~~I~  152 (374)
                      .+.++..++.++|+++|++|+|||.+|+.+.....  .+.++..+..++|+..++..+. ...||+.|..+|..|.+.++
T Consensus        83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~p--tPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~  160 (290)
T PF08392_consen   83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNP--TPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ  160 (290)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCc--CCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence            34588899999999999999999999988765432  4678899999999986677775 56789999999999999999


Q ss_pred             cCCCCEEEEEeeccCCC
Q 017289          153 AGLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~  169 (374)
                      .-.-..+||+.+|..+.
T Consensus       161 ~~p~~~ALVVstE~~s~  177 (290)
T PF08392_consen  161 AHPNSYALVVSTENISA  177 (290)
T ss_pred             hCCCcEEEEEEEeeccc
Confidence            98889999999999876

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=98.14  E-value=7.3e-06  Score=71.25  Aligned_cols=108  Identities=12%  Similarity=0.221  Sum_probs=80.2

Q ss_pred             EeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCC--CCCCce
Q 017289           54 VAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP--ETVPLR  131 (374)
Q Consensus        54 vG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~--~~~p~~  131 (374)
                      +|.|+..+.-.    ..+.+...|++.|++.+|++.++++++|+.+++|+-.+-- ..-..+.++...+|+.  .++..+
T Consensus        37 ~glgq~~~av~----~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD-~sKs~~t~v~~ll~~s~~~~~~~~  111 (174)
T PF01154_consen   37 IGLGQEKMAVP----PPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVD-KSKSISTYVHQLLGLSGNPDCRGV  111 (174)
T ss_dssp             TTT--SEEEE------TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SB-SSS-HHHHHHHHTTTTT-SSSEEE
T ss_pred             hhcCeeEEEeC----CCcccHHHHHHHHHHHHHHHcCCCHHHccEEEEecccccc-ccccHHHHHHHHhCcCCCCceeee
Confidence            46666554321    2567889999999999999999999999999999754322 1334688899999994  234567


Q ss_pred             eecccCchHHHHHHHHHHHHHcCCCC--EEEEEeecc
Q 017289          132 TVNRQCSSGLQAVADVATAIKAGLYD--IGIAAGLES  166 (374)
Q Consensus       132 ~v~~acaSg~~ai~~Aa~~I~sG~~d--~vLv~G~E~  166 (374)
                      .+..+|-+|..||..|+..|+++..+  .+||++.|-
T Consensus       112 e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi  148 (174)
T PF01154_consen  112 EMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI  148 (174)
T ss_dssp             EEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred             ehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence            88999999999999999999998654  899999875

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=96.77  E-value=0.0022  Score=48.81  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=34.3

Q ss_pred             eeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       131 ~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      +.++.+|++++.+|..|...|++|.++.+||++.|+++.
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~   39 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR   39 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred             CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence            468899999999999999999999999999999998765

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=96.43  E-value=0.0048  Score=50.62  Aligned_cols=50  Identities=28%  Similarity=0.361  Sum_probs=33.1

Q ss_pred             eEEEEEEEEeccC-CCCC-----CCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          316 LGVFRSFSAVGVD-PSVM-----GIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       316 ~a~i~g~~~~~~~-p~~~-----~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      +++|.|++...+. ....     ..+..+++++||+++|++++|||++|.|-.=+.
T Consensus         1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~   56 (119)
T PF02801_consen    1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTP   56 (119)
T ss_dssp             SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSH
T ss_pred             CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccc
Confidence            4689999987643 1111     123469999999999999999999999976544

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=93.23  E-value=0.78  Score=41.80  Aligned_cols=92  Identities=10%  Similarity=-0.001  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCC-----------------------cccHHHHHHHHcCCCCCCCc
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST-----------------------RAMECRMAAFYAGFPETVPL  130 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~-----------------------~~~~a~~va~~~Gl~~~~p~  130 (374)
                      ...|+.+++.+++++.    +++|.+|+++..+....                       ...++.+++...|.  ..|.
T Consensus        34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~  107 (218)
T PF13723_consen   34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN  107 (218)
T ss_pred             HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence            4567777777777542    57789999876554320                       01256777788777  5799


Q ss_pred             eeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcc
Q 017289          131 RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSI  172 (374)
Q Consensus       131 ~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~  172 (374)
                      .++..+-.|...++.+|+..+..| .+-||++.+|.....++
T Consensus       108 tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y  148 (218)
T PF13723_consen  108 TALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPY  148 (218)
T ss_pred             EEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhh
Confidence            999998889999999999999999 89999999987654333

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=90.40  E-value=0.55  Score=36.11  Aligned_cols=72  Identities=19%  Similarity=0.147  Sum_probs=41.9

Q ss_pred             HHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee----ecccCchHHHHHHHHHH--HHHcCCCCEE
Q 017289           86 IEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT----VNRQCSSGLQAVADVAT--AIKAGLYDIG  159 (374)
Q Consensus        86 L~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~----v~~acaSg~~ai~~Aa~--~I~sG~~d~v  159 (374)
                      |+++|++++|||.++.-+..      ...-..++..+|++.+.....    -+.+|++-..++..+.+  .|+  .-|.+
T Consensus         1 L~~~g~~~~did~~i~hq~~------~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~--~Gd~v   72 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQAS------KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIK--PGDRV   72 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSS------HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSC--TTEEE
T ss_pred             CccccCCHHHCCEEEeCCCC------HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCC--CCCEE
Confidence            68999999999999986532      223455788899974332222    34556666666665555  333  34688


Q ss_pred             EEEeec
Q 017289          160 IAAGLE  165 (374)
Q Consensus       160 Lv~G~E  165 (374)
                      |++++.
T Consensus        73 l~~~~G   78 (90)
T PF08541_consen   73 LLVGFG   78 (90)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            877764

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=88.85  E-value=2.9  Score=43.07  Aligned_cols=110  Identities=12%  Similarity=0.031  Sum_probs=66.3

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      .+.|+|.|.+...-...+ ....+.........++++|++.+|++++|||.+-+-..+      +.......+.+|+...
T Consensus       265 ~~~V~i~g~a~~~~~~~~-~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF------~~~~~~~~E~LGl~~~  337 (498)
T PRK08257        265 DRWVYLHGGADAHDPYDI-LERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCF------PSAVQVAARELGLDLD  337 (498)
T ss_pred             CceEEEEEEEEeeCcccc-ccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCC------HHHHHHHHHHcCcCCC
Confidence            457899998876321110 011222222334568999999999999999987653221      1122334467887532


Q ss_pred             --CCcee-------ecccCchHHHHHHHHHHHHHcCCCCEEEEEee
Q 017289          128 --VPLRT-------VNRQCSSGLQAVADVATAIKAGLYDIGIAAGL  164 (374)
Q Consensus       128 --~p~~~-------v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~  164 (374)
                        .|..+       -..++++|+..+.++++.++....++.|+.+.
T Consensus       338 g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~  383 (498)
T PRK08257        338 DPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTAN  383 (498)
T ss_pred             CCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECC
Confidence              12211       12234467888899999999766788887753

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=87.51  E-value=1.3  Score=43.19  Aligned_cols=84  Identities=19%  Similarity=0.135  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce------eecccCchHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR------TVNRQCSSGLQAVADV  147 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~------~v~~acaSg~~ai~~A  147 (374)
                      ....+..+++++|+++|++++|||.+++-...      ...-..+...+|++.+.-..      .-|++++|-..++..+
T Consensus       206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~------~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~  279 (345)
T TIGR00748       206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN------GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAV  279 (345)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC------hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHH
Confidence            34455688899999999999999998874322      12344578889997422211      2244455555566666


Q ss_pred             HHHHHcCCCCEEEEEeec
Q 017289          148 ATAIKAGLYDIGIAAGLE  165 (374)
Q Consensus       148 a~~I~sG~~d~vLv~G~E  165 (374)
                      ...++.|  |.||.+|+-
T Consensus       280 ~~~~~~G--d~vll~~~G  295 (345)
T TIGR00748       280 LDIAEPG--DRILAVSYG  295 (345)
T ss_pred             HHhcCCC--CEEEEEEec
Confidence            6666666  577777654

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=86.60  E-value=3.2  Score=40.98  Aligned_cols=81  Identities=12%  Similarity=0.052  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHc-----CCCCCCCceeecccC----chHHHHHHHH
Q 017289           77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYA-----GFPETVPLRTVNRQC----SSGLQAVADV  147 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~-----Gl~~~~p~~~v~~ac----aSg~~ai~~A  147 (374)
                      ....+++++|+++|+.++|||.++.-+..      ...-..++..+     |++.++-..++..-+    +|-..++..+
T Consensus       273 ~~~~~i~~~L~~~gl~~~DId~~v~Hq~n------~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a  346 (378)
T PRK06816        273 YTIKPLLELVDKRNLDPDDIDYFLPHYSS------EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDEL  346 (378)
T ss_pred             HHHHHHHHHHHHcCCChhhCCEEeeCccc------HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHH
Confidence            34677888999999999999988874332      12234555655     887443333444444    4444445444


Q ss_pred             HHHHHcCC---CCEEEEEeecc
Q 017289          148 ATAIKAGL---YDIGIAAGLES  166 (374)
Q Consensus       148 a~~I~sG~---~d~vLv~G~E~  166 (374)
                         +..|.   -|.|++.+.|+
T Consensus       347 ---~~~g~~~~Gd~vl~~~~~s  365 (378)
T PRK06816        347 ---LNSGRLKPGQKILCFVPES  365 (378)
T ss_pred             ---HHcCCCCCCCEEEEEEecc
Confidence               33443   37788777665

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=86.51  E-value=2.6  Score=40.47  Aligned_cols=83  Identities=11%  Similarity=0.071  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH-HHHHcC
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAG  154 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa-~~I~sG  154 (374)
                      +...++++++|+++|++++|||.+++-+.      ....-..+...+|++.++...++..-+.++...+..+. ..+..|
T Consensus       227 ~~~~~~~~~~L~~~gl~~~did~~~~h~~------~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~~~  300 (326)
T PRK05963        227 RMMSGASQNVLASAAMTPQDIDRFFPHQA------NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANLEQ  300 (326)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHhC
Confidence            34566788999999999999999887322      12345567889999754433344444555544443333 234444


Q ss_pred             C---CCEEEEEee
Q 017289          155 L---YDIGIAAGL  164 (374)
Q Consensus       155 ~---~d~vLv~G~  164 (374)
                      .   -|.+|+.|+
T Consensus       301 ~~~~Gd~vll~~~  313 (326)
T PRK05963        301 PLREGERLLFAAA  313 (326)
T ss_pred             CCCCCCEEEEEEE
Confidence            3   367777765

>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]

Probab=85.84  E-value=4.5  Score=39.59  Aligned_cols=100  Identities=13%  Similarity=0.103  Sum_probs=70.3

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcC--CCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAG--FPET  127 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~G--l~~~  127 (374)
                      .-+=||-|++..+-.    -...+...|..-++..++++-+|+++.|..+-||+-.-.- ..-..-..+.++++  -...
T Consensus        40 gKytIGLGq~~Mgfc----sdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiD-KSKSVKt~LMqLF~~sgNtd  114 (462)
T KOG1393|consen   40 GKYTIGLGQTQMGFC----SDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIID-KSKSVKTVLMQLFEESGNTD  114 (462)
T ss_pred             cceEeccCcceeccc----CchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccc-cchHHHHHHHHHhhhcCCCc
Confidence            357789999887521    1233467788899999999999999999999998643110 01122223334443  1135


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAG  154 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG  154 (374)
                      +......++|=+|..|+..|.+.|.+-
T Consensus       115 IEGiDttnACYGGtaALfnavnWiESs  141 (462)
T KOG1393|consen  115 IEGIDTTNACYGGTAALFNAVNWIESS  141 (462)
T ss_pred             cccccccccccccHHHHHHHhhhhhhc
Confidence            677788899999999999999999984

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=85.71  E-value=3.2  Score=39.94  Aligned_cols=81  Identities=12%  Similarity=0.054  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH-HHHHcCC-
Q 017289           78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAGL-  155 (374)
Q Consensus        78 a~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa-~~I~sG~-  155 (374)
                      ...+++++|+++|++++|||.+++-+.      ....-..+...+|++.+.-..++..-+.++...+-... ..+++|. 
T Consensus       232 ~~~~i~~~L~~~gl~~~did~~~~H~~------~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~~  305 (329)
T PRK07204        232 LMKFIDKLLMDAGYTLADIDLIVPHQA------SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEAIKQKKV  305 (329)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCCC
Confidence            457889999999999999999887432      12244577888999754333344444444444332222 3445553 


Q ss_pred             --CCEEEEEee
Q 017289          156 --YDIGIAAGL  164 (374)
Q Consensus       156 --~d~vLv~G~  164 (374)
                        -|.+|.+++
T Consensus       306 ~~Gd~vll~~~  316 (329)
T PRK07204        306 QRGNKILLLGT  316 (329)
T ss_pred             CCCCEEEEEEE
Confidence              367776654

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=84.97  E-value=9.2  Score=36.48  Aligned_cols=78  Identities=15%  Similarity=0.062  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHH-HHHHcCCC----CCCCceeecccCchHHHHHHHHHH
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFP----ETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~-va~~~Gl~----~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+....+++++|+++|++++|||.++.-.......  ...... .....+..    .......-+..++++...+..+..
T Consensus       204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~  281 (332)
T cd00825         204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG--DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVL  281 (332)
T ss_pred             HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC--CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHH
Confidence            34556889999999999999999988754322211  111111 11112210    011122345667788888888888


Q ss_pred             HHHcC
Q 017289          150 AIKAG  154 (374)
Q Consensus       150 ~I~sG  154 (374)
                      ..+.|
T Consensus       282 ~~~~~  286 (332)
T cd00825         282 MLEHG  286 (332)
T ss_pred             HHhcC
Confidence            88877

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=84.83  E-value=11  Score=37.19  Aligned_cols=109  Identities=14%  Similarity=0.161  Sum_probs=60.4

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC-
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET-  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~-  127 (374)
                      +.++|.|.+.......+ ....+.....-...++++||+++|++++|||.+-+-....      ...-...+.+|+.++ 
T Consensus       232 ~~v~I~g~g~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft------~~~~~~~e~lgl~~~G  304 (389)
T PRK06064        232 TPVWIKASGQASDTIAL-HDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFT------IAEILAYEDLGFAKKG  304 (389)
T ss_pred             CCeEEEEEEEecCcccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCc------HHHHHHHHHcCCCCCC
Confidence            46889999876443211 0111221112334789999999999999999876522111      112223455665210 


Q ss_pred             ----------------CCc------e-eecccCchHHHHHHHHHHHHHcC----C-----CCEEEEEee
Q 017289          128 ----------------VPL------R-TVNRQCSSGLQAVADVATAIKAG----L-----YDIGIAAGL  164 (374)
Q Consensus       128 ----------------~p~------~-~v~~acaSg~~ai~~Aa~~I~sG----~-----~d~vLv~G~  164 (374)
                                      .|.      . .-...+++|+.-+.+++..++-.    .     ++++|+.|.
T Consensus       305 ~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~rqv~~a~~~l~~~~  373 (389)
T PRK06064        305 EGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVIGAGYGLTHNV  373 (389)
T ss_pred             chHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCccCCCccEEEEecC
Confidence                            011      1 11233457888888899988843    1     456666553

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=84.74  E-value=9.4  Score=37.40  Aligned_cols=52  Identities=12%  Similarity=0.070  Sum_probs=34.0

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEE
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVV  101 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~  101 (374)
                      +.++|.|.+...-.... ....+.....-...++++||+++|++++|||.+-+
T Consensus       225 ~~~~i~g~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei  276 (375)
T cd00829         225 RPVWILGVGAASDTPSL-SERDDFLSLDAARLAARRAYKMAGITPDDIDVAEL  276 (375)
T ss_pred             CCeEEEEEEEecCCccc-cccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence            46899999886433211 01111112234457999999999999999997765

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=83.71  E-value=4  Score=39.41  Aligned_cols=83  Identities=18%  Similarity=0.138  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchH----HHHHHHHHHH-
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSG----LQAVADVATA-  150 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg----~~ai~~Aa~~-  150 (374)
                      ....++++++|+++|++++|||.+++-..      +...-..+...+|++.+.-..++..-+.++    ..++..+.+. 
T Consensus       239 ~~~~~~~~~~L~~~g~~~~did~~i~H~~------~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~~g  312 (338)
T PRK09258        239 ELAVDTWEAFLAQLGWAVEQVDRVICHQV------GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEG  312 (338)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEecCCC------CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHHhC
Confidence            44556888999999999999999887432      123445678889997433333333333333    3344443322 


Q ss_pred             -HHcCCCCEEEEEeecc
Q 017289          151 -IKAGLYDIGIAAGLES  166 (374)
Q Consensus       151 -I~sG~~d~vLv~G~E~  166 (374)
                       ++.  -|.+|.+++..
T Consensus       313 ~~~~--Gd~vll~~~G~  327 (338)
T PRK09258        313 FLKP--GDRVALLGIGS  327 (338)
T ss_pred             CCCC--CCEEEEEEech
Confidence             233  37777777643

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=83.39  E-value=13  Score=33.84  Aligned_cols=88  Identities=14%  Similarity=0.100  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHH-HHcCCC----CCCCceeecccCchHHHHHHHHHH
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA-FYAGFP----ETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va-~~~Gl~----~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+...++++++|+++|++++|||.++.-.......  ......+- ...+..    .......-+..++|+...+..+..
T Consensus       144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~  221 (254)
T cd00327         144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIG--DAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLL  221 (254)
T ss_pred             hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccc--cHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHH
Confidence            45667889999999999999999988754322211  11111111 111110    011122345667788888888888


Q ss_pred             HHHcC-------CCCEEEEEee
Q 017289          150 AIKAG-------LYDIGIAAGL  164 (374)
Q Consensus       150 ~I~sG-------~~d~vLv~G~  164 (374)
                      ..+.+       ..+.+++.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~l~~~~  243 (254)
T cd00327         222 MLEHEFIPPTPREPRTVLLLGF  243 (254)
T ss_pred             HHhCCCcCCCCCCcCEEEEeeE
Confidence            88876       5677777654

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=82.60  E-value=4.1  Score=39.21  Aligned_cols=81  Identities=11%  Similarity=0.132  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH-HHHcCC-
Q 017289           78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKAGL-  155 (374)
Q Consensus        78 a~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~-~I~sG~-  155 (374)
                      ...+++++|+++|++++|||.+++-..      ....-..+...+|++.+.-..++..-+.++...+-.+.. .++.|. 
T Consensus       228 ~~~~i~~~L~~~g~~~~did~~~~hq~------~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~  301 (326)
T CHL00203        228 VPAVIIKCLNALNISIDEVDWFILHQA------NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKI  301 (326)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCC
Confidence            445788999999999999999887532      123455678899998544444555555555554433333 334443 


Q ss_pred             --CCEEEEEee
Q 017289          156 --YDIGIAAGL  164 (374)
Q Consensus       156 --~d~vLv~G~  164 (374)
                        -|.+|++|+
T Consensus       302 ~~Gd~vll~~~  312 (326)
T CHL00203        302 QPGQIIVLSGF  312 (326)
T ss_pred             CCCCEEEEEEE
Confidence              356776654

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=82.34  E-value=4.3  Score=40.11  Aligned_cols=81  Identities=14%  Similarity=0.222  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH-HHHcCC-
Q 017289           78 LAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIKAGL-  155 (374)
Q Consensus        78 a~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~-~I~sG~-  155 (374)
                      ...+++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-..++..-+.++...+-.+.. .++.|. 
T Consensus       282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~------n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~~g~~  355 (379)
T PLN02326        282 VPQVIESALQKAGLTAESIDWLLLHQA------NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSGKV  355 (379)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHHcCCC
Confidence            345778889999999999998887432      112345678899997544334555666666555444433 344443 


Q ss_pred             --CCEEEEEee
Q 017289          156 --YDIGIAAGL  164 (374)
Q Consensus       156 --~d~vLv~G~  164 (374)
                        -|.+|..|+
T Consensus       356 ~~Gd~vll~~~  366 (379)
T PLN02326        356 KKGDVIATAGF  366 (379)
T ss_pred             CCCCEEEEEEE
Confidence              366776665

>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=82.00  E-value=2.3  Score=38.86  Aligned_cols=82  Identities=16%  Similarity=0.097  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHH
Q 017289           71 DTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATA  150 (374)
Q Consensus        71 ~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~  150 (374)
                      .+...+.....+.++|.++|+...|+|.|+++..-++. .|.-++-.++..+.+..++|.+.|+     .+.++...   
T Consensus        34 ~r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSF-TGlRIG~~~AkgLA~~l~iplvgvs-----sL~~~A~~---  104 (220)
T COG1214          34 KRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSF-TGLRIGVAFAKGLALALNIPLVGVS-----SLEALAQG---  104 (220)
T ss_pred             cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcc-cchhhHHHHHHHHHHHcCCCEEEeC-----HHHHHHHh---
Confidence            34567788999999999999999999999998754443 2433333333333332355777763     34444332   


Q ss_pred             HHcCCCCEEEE
Q 017289          151 IKAGLYDIGIA  161 (374)
Q Consensus       151 I~sG~~d~vLv  161 (374)
                      .+......+++
T Consensus       105 ~~~~~~~~v~v  115 (220)
T COG1214         105 GAEKNAGFVLV  115 (220)
T ss_pred             hhccCCCceEE
Confidence            44444555555

>PRK07937 lipid-transfer protein; Provisional

Probab=81.48  E-value=14  Score=36.21  Aligned_cols=105  Identities=14%  Similarity=0.112  Sum_probs=59.7

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      .+.|+|.|.+...-....  ...+..+.    .+++.++++ ||++++|||.+-+-...+      ...-...+.+|+..
T Consensus       224 ~~pv~I~g~~~~~~~~~~--~~~d~~~~----~~~~~a~~~aAgi~~~diD~~Ei~D~F~------~~~l~~~e~lGl~g  291 (352)
T PRK07937        224 ERPAWITGIEHRIESPSL--GARDLTRS----PSTALAAEAATGGDAGGVDVAELHAPFT------HQELILREALGLGD  291 (352)
T ss_pred             CCcEEEEEEEEeeCCccc--cccccccH----HHHHHHHHHhcCCCHHHCCEEEEeCCCh------HHHHHHHHHcCCCC
Confidence            356999999874211000  01223332    233444555 599999999875532111      11223346677631


Q ss_pred             CCCc------eeecccCchHHHHHHHHHHHHHcCCCCEEEEEee
Q 017289          127 TVPL------RTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL  164 (374)
Q Consensus       127 ~~p~------~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~  164 (374)
                      ..|.      ..-...++||..-+.+++..++.+.++++|+.+.
T Consensus       292 ~~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~  335 (352)
T PRK07937        292 KTKVNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHAT  335 (352)
T ss_pred             CCCcCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEecc
Confidence            1121      1122234478888999999999988999988764

>PRK04262 hypothetical protein; Provisional

Probab=81.44  E-value=2.9  Score=40.71  Aligned_cols=82  Identities=22%  Similarity=0.173  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce------eecccCchHHHHHHHHHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR------TVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~------~v~~acaSg~~ai~~Aa~  149 (374)
                      ....++++++|+++|++++|||.+++-..      ....-..+...+|++.+.-..      .-|++++|-..++..+..
T Consensus       209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~------n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~  282 (347)
T PRK04262        209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP------NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD  282 (347)
T ss_pred             HHHHHHHHHHHHHhCcCHHHhceeecCCC------chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH
Confidence            56678899999999999999998887422      123445678889997432221      123333444445555555


Q ss_pred             HHHcCCCCEEEEEeec
Q 017289          150 AIKAGLYDIGIAAGLE  165 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E  165 (374)
                      .++.|  |.+|.+++-
T Consensus       283 ~~~~G--d~vll~~~G  296 (347)
T PRK04262        283 VAKPG--DRILVVSFG  296 (347)
T ss_pred             hCCCC--CEEEEEecC
Confidence            44444  677776653

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=80.42  E-value=5.7  Score=37.81  Aligned_cols=83  Identities=19%  Similarity=0.271  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHH-HHHHHcC
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADV-ATAIKAG  154 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~A-a~~I~sG  154 (374)
                      +...++++++|+++|++++|||.+++-+.      +...-..+...+|++.+....++..-+..+...+... .+.++.|
T Consensus       223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~------~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~~  296 (320)
T cd00830         223 RLMPESIEEALEKAGLTPDDIDWFVPHQA------NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIEEG  296 (320)
T ss_pred             HhhHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHHcC
Confidence            34567889999999999999998887432      1233456788899974443333433344443332222 2344555


Q ss_pred             C---CCEEEEEee
Q 017289          155 L---YDIGIAAGL  164 (374)
Q Consensus       155 ~---~d~vLv~G~  164 (374)
                      .   -|.+|+.|.
T Consensus       297 ~~~~G~~vll~~~  309 (320)
T cd00830         297 KLKKGDLVLLLGF  309 (320)
T ss_pred             CCCCCCEEEEEEE
Confidence            3   467777665

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=80.30  E-value=2.8  Score=40.57  Aligned_cols=85  Identities=19%  Similarity=0.221  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH-HHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT-AIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~-~I~  152 (374)
                      ......++++++|+.+|+.++|||.++.-...      ..+-..++..+|++.++...++..-+.++..++-.+.. .++
T Consensus       221 av~~~~~~~~~~L~~~~l~~~dId~~vpHQan------~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~~~  294 (323)
T COG0332         221 AVRAMPKAIEEVLEKAGLTPEDIDWFVPHQAN------LRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEALR  294 (323)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEcccccc------HHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHHhh
Confidence            34567788999999999999999998875431      23445678899998777777776666666555544433 334


Q ss_pred             cCC---CCEEEEEee
Q 017289          153 AGL---YDIGIAAGL  164 (374)
Q Consensus       153 sG~---~d~vLv~G~  164 (374)
                      .|+   -|.+|..|+
T Consensus       295 ~g~ik~Gd~ill~~f  309 (323)
T COG0332         295 EGRIKPGDLVLLEAF  309 (323)
T ss_pred             hCCCCCCCEEEEEee
Confidence            443   267776655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	374
2wua_A	440	Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas		1e-147
2wu9_A	442	Crystal Structure Of Peroxisomal Kat2 From Arabidop		1e-144
2c7y_A	404	Plant Enzyme Length = 404		1e-142
2iik_A	418	Crystal Structure Of Human Peroxisomal Acetyl-Coa A		3e-95
1afw_A	393	The 1.8 Angstrom Crystal Structure Of The Dimeric P		9e-65
1pxt_A	390	The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac		1e-64
1m1t_A	392	Biosynthetic Thiolase, Q64a Mutant Length = 392		6e-47
4e1l_A	395	Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla		7e-47
1dlu_A	389	Unliganded Biosynthetic Thiolase From Zoogloea Rami		2e-46
1wdk_C	390	Fatty Acid Beta-Oxidation Multienzyme Complex From		2e-46
2wl5_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		2e-46
2vu2_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Wit		2e-46
2wl4_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		2e-46
2wl4_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		2e-46
2wku_A	392	Biosynthetic Thiolase From Z. Ramigera. The N316h M		6e-46
2wl6_A	392	Biosynthetic Thiolase From Z. Ramigera. The N316h-H		7e-46
2wkv_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		8e-46
3ss6_A	394	Crystal Structure Of The Bacillus Anthracis Acetyl-		3e-45
1ulq_A	401	Crystal Structure Of Tt0182 From Thermus Thermophil		4e-45
1m1o_A	392	Crystal Structure Of Biosynthetic Thiolase, C89a Mu		4e-45
1qfl_A	389	Biosynthetic Thiolase From Zoogloea Ramigera In Com		4e-45
1m4s_A	392	Biosynthetic Thiolase, Cys89 Acetylated, Unliganded		4e-45
2wl4_B	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-45
2wl5_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-45
2wl4_D	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-45
2wkt_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-45
2wkt_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		1e-43
4dd5_A	396	Biosynthetic Thiolase (Thla1) From Clostridium Diff		1e-42
1wl4_A	397	Human Cytosolic Acetoacetyl-Coa Thiolase Complexed		6e-42
3goa_A	387	Crystal Structure Of The Salmonella Typhimurium Fad		2e-36
2ib7_A	395	Crystallographic And Kinetic Studies Of Human Mitoc		3e-29
2ibu_A	395	Crystallographic And Kinetic Studies Of Human Mitoc		8e-28
2f2s_A	406	Human Mitochondrial Acetoacetyl-Coa Thiolase Length		1e-27
3svk_A	407	Crystal Structure Of Acetyl-Coa Acetyltransferase F		1e-26

>pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440

Iteration: 1
 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 253/345 (73%), Positives = 287/345 (83%)
Query: 19  SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLL 78
           SS +S    +S S+C+AG++A Y R   F DDVVIVAAYR+ +CKAKRGG KDT  DD+L
Sbjct: 3   SSTSSSLENLSVSVCAAGDSAAYQRNSVFGDDVVIVAAYRSPLCKAKRGGLKDTYPDDIL 62
Query: 79  APVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS 138
           APVLKA+IEKT +NP+EVGDIVVG+VL  GS RA ECRMAAFYAGFPETVP+RTVNRQCS
Sbjct: 63  APVLKALIEKTNINPAEVGDIVVGSVLGAGSQRASECRMAAFYAGFPETVPVRTVNRQCS 122
Query: 139 SGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT 198
           SGLQAVADVA AIKAG YDIGI AGLESMT N ++  G VNPKV+   QA+DCLLPMGIT
Sbjct: 123 SGLQAVADVAAAIKAGFYDIGIGAGLESMTANPMAWEGSVNPKVKTMAQAQDCLLPMGIT 182
Query: 199 SENVAQRFGVTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTIS 258
           SENVAQ+F +TRQEQD                G+FKDEIIP+ TKIVDPKTG EK VTIS
Sbjct: 183 SENVAQKFSITRQEQDQAAVGSHRKTAAATAAGRFKDEIIPIKTKIVDPKTGDEKPVTIS 242
Query: 259 VDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGV 318
           VDDGIRP T++ADLAKLKP F+KDG+TTAG +SQVSDGAGAVLLMKRS+A+QKGLPILGV
Sbjct: 243 VDDGIRPGTSLADLAKLKPVFRKDGSTTAGTSSQVSDGAGAVLLMKRSIALQKGLPILGV 302
Query: 319 FRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           FR+F+AVGV PS+MGIGPAVAIPAAVK+AGLQIDDI+LFEINE  
Sbjct: 303 FRTFAAVGVPPSIMGIGPAVAIPAAVKAAGLQIDDIDLFEINEAF 347

>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442

Iteration: 1
 Score =  506 bits (1303), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 247/329 (75%), Positives = 279/329 (84%)
Query: 35  AGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPS 94
           AG++A Y R   + DDVVIVAA+RT +CK+KRG FKDT  DDLLAPVL+A+IEKT LNPS
Sbjct: 16  AGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPS 75
Query: 95  EVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAG 154
           EVGDIVVGTVLAPGS RA ECRMAAFYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG
Sbjct: 76  EVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAG 135
Query: 155 LYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 214
            YDIGI AGLESMT N ++  G VNP V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD
Sbjct: 136 FYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQD 195
Query: 215 LXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAK 274
                           GKFKDEIIPV TK+VDPKTG EK +T+SVDDGIRP TT+A L K
Sbjct: 196 QAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGK 255
Query: 275 LKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGI 334
           LKP FKKDGTTTAGN+SQVSDGAGAVLLMKRS+A+QKGLP+LGVFR+F+AVGVDP++MGI
Sbjct: 256 LKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGI 315
Query: 335 GPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           GPAVAIPAAVK+AGL++DDI+LFEINE  
Sbjct: 316 GPAVAIPAAVKAAGLELDDIDLFEINEAF 344

>pdb|2C7Y|A Chain A, Plant Enzyme Length = 404

Iteration: 1
 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 245/327 (74%), Positives = 277/327 (84%)
Query: 37  EAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEV 96
           ++A Y R   + DDVVIVAA+RT +CK+KRG FKDT  DDLLAPVL+A+IEKT LNPSEV
Sbjct: 1   DSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEV 60
Query: 97  GDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLY 156
           GDIVVGTVLAPGS RA ECRMAAFYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG Y
Sbjct: 61  GDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFY 120
Query: 157 DIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLX 216
           DIGI AGLESMT N ++  G VNP V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD  
Sbjct: 121 DIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQA 180
Query: 217 XXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276
                         GKFKDEIIPV TK+VDPKTG EK +T+SVDDGIRP TT+A L KLK
Sbjct: 181 AVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLK 240
Query: 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGP 336
           P FKKDGTTTAGN+SQVSDGAGAVLLMKRS+A+QKGLP+LGVFR+F+AVGVDP++MGIGP
Sbjct: 241 PVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGP 300
Query: 337 AVAIPAAVKSAGLQIDDINLFEINEVL 363
           AVAIPAAVK+AGL++DDI+LFEINE  
Sbjct: 301 AVAIPAAVKAAGLELDDIDLFEINEAF 327

>pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418

Iteration: 1
 Score =  345 bits (884), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 172/314 (54%), Positives = 226/314 (71%), Gaps = 2/314 (0%)
Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           DVV+V   RTAIC+A RGGFKDT  D+LL+ V+ AV++   L P ++GDI VG VL PG+
Sbjct: 31  DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA 90
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
             A+  R+A F +  PETVPL TVNRQCSSGLQAVA +A  I+ G YDIG+A G+ESM++
Sbjct: 91  G-AIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 149
Query: 170 NSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXXXX 229
                 G +  ++    +ARDCL+PMGITSENVA+RFG++R++QD               
Sbjct: 150 ADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQS 209
Query: 230 XGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGN 289
            G F+ EI+PV T + D K G ++ +T++ D+GIRP+TT+  LAKLKPAFKKDG+TTAGN
Sbjct: 210 KGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGN 268
Query: 290 ASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGL 349
           +SQVSDGA A+LL +RS A + GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL
Sbjct: 269 SSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGL 328
Query: 350 QIDDINLFEINEVL 363
            + D+++FEINE  
Sbjct: 329 TVSDVDIFEINEAF 342

>pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393

Iteration: 1
 Score =  243 bits (621), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVI----EKTRLNPSEVGDIVVGTV 104
           +DVVIVAA R+AI K  +G FKD   D LL   L   I    E  R + + + ++  G V
Sbjct: 10  EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69
Query: 105 LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
           L  G+  A E R A   +G P + P   +NRQCSSGL AV D+A  IK G  DIG+A G+
Sbjct: 70  LNVGAG-ATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128
Query: 165 ESMTVN--SISVVGQVN-PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXX 221
           ESMT N  +++ +G ++  +++   +A+ CL+PMGIT+ENVA  F ++R++QD       
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188
Query: 222 XXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
                    G F+DEI+P+  K+ D             D+G RPN T   L+ ++PAF K
Sbjct: 189 QKAYKAKNEGLFEDEILPI--KLPDGSI-------CQSDEGPRPNVTAESLSSIRPAFIK 239
Query: 282 D-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           D GTTTAGNASQVSDG   VLL +RS+A Q  LP+LG +  F  VGV P +MG+GPA AI
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAI 299
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
           P  +++ GLQ+ DI++FEINE  
Sbjct: 300 PKVLEATGLQVQDIDIFEINEAF 322

>pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390

Iteration: 1
 Score =  243 bits (621), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 195/323 (60%), Gaps = 18/323 (5%)
Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVI----EKTRLNPSEVGDIVVGTV 104
           +DVVIVAA R+AI K  +G FKD   D LL   L   I    E  R + + + ++  G V
Sbjct: 7   EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 66
Query: 105 LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
           L  G+  A E R A   +G P + P   +NRQCSSGL AV D+A  IK G  DIG+A G+
Sbjct: 67  LNVGAG-ATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 125
Query: 165 ESMTVN--SISVVGQVN-PKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXX 221
           ESMT N  +++ +G ++  +++   +A+ CL+PMGIT+ENVA  F ++R++QD       
Sbjct: 126 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 185
Query: 222 XXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
                    G F+DEI+P+  K+ D             D+G RPN T   L+ ++PAF K
Sbjct: 186 QKAYKAKNEGLFEDEILPI--KLPDGSI-------CQSDEGPRPNVTAESLSSIRPAFIK 236
Query: 282 D-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           D GTTTAGNASQVSDG   VLL +RS+A Q  LP+LG +  F  VGV P +MG+GPA AI
Sbjct: 237 DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAI 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
           P  +++ GLQ+ DI++FEINE  
Sbjct: 297 PKVLEATGLQVQDIDIFEINEAF 319

>pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392

Iteration: 1
 Score =  184 bits (468), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/323 (37%), Positives = 176/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
            A   R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GANPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395

Iteration: 1
 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 182/331 (54%), Gaps = 30/331 (9%)
Query: 50  DVVIVAAYRTAICKAKRGG-FKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
           DVVIV+A RT I     GG FK+T A  L    +K  I +  LN SE+ ++++G VL  G
Sbjct: 6   DVVIVSAVRTPI--GSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTG 63
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
             + +  R  A  AG P +VP  TVN+ C SGL++V   A +I +G  D+ IA G E+M+
Sbjct: 64  LGQNV-ARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMS 122
Query: 169 --------------VNSISVVGQV--NPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE 212
                         + +I++V  +  +  ++ F Q       MGIT+EN+A +F  TR+ 
Sbjct: 123 QAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYH-----MGITAENIATKFEFTREM 177
Query: 213 QDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL 272
           QD                 +FK+EI+PV+  I   K  +E   TI  D+  +   T   L
Sbjct: 178 QDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGK--IE---TIDKDEYPKLGMTFEGL 232
Query: 273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM 332
           +KLKPAFKKDGT TAGNAS ++DGA  ++LM +  A + G+  L   +S+++ GV+P VM
Sbjct: 233 SKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVM 292
Query: 333 GIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
           G GP  A   A+K AGL I+DI+L E NE  
Sbjct: 293 GTGPIPATRKALKKAGLSINDIDLIEANEAF 323

>pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/323 (37%), Positives = 176/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 2   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 60
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 61  QN-PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 119
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 120 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 179
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 180 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 233
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 234 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 293
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 294 RKALERAGWKIGDLDLVEANEAF 316

>pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/319 (36%), Positives = 173/319 (54%), Gaps = 15/319 (4%)
Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTV---L 105
           DVVIV   RT + ++K G  ++T A+D+ A ++  V+E+ ++++P EV D++ G V   L
Sbjct: 6   DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTL 65
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
             G   A   RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G+E
Sbjct: 66  EQGWNIA---RMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVE 122
Query: 166 SMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXX 225
            M    +S++  V+P   +   A      MG+T+E + +  G++R++QD           
Sbjct: 123 HM--GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAH 180
Query: 226 XXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGT 284
                GKFKDEIIP+       + G  K      D+ IRP+TT+  LA LKPAF  K GT
Sbjct: 181 KATVEGKFKDEIIPMQGY---DENGFLK--IFDYDETIRPDTTLESLAALKPAFNPKGGT 235
Query: 285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAV 344
            TAG +SQ++DGA  +++M    A   GL  L V RS +  GVDP++MG GP  A   A+
Sbjct: 236 VTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKAL 295
Query: 345 KSAGLQIDDINLFEINEVL 363
           K AGL + DI+  E+NE  
Sbjct: 296 KRAGLNMADIDFIELNEAF 314

>pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/323 (37%), Positives = 176/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 64  QN-PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/323 (37%), Positives = 176/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 64  QN-PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/323 (37%), Positives = 175/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/323 (37%), Positives = 175/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392

Iteration: 1
 Score =  181 bits (459), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 176/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 64  QN-PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E +E  
Sbjct: 297 RKALERAGWKIGDLDLVEAHEAF 319

>pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392

Iteration: 1
 Score =  181 bits (458), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 176/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 64  QN-PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E +E  
Sbjct: 297 RKALERAGWKIGDLDLVEAHEAF 319

>pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  181 bits (458), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 176/323 (54%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 64  QN-PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E +E  
Sbjct: 297 RKALERAGWKIGDLDLVEADEAF 319

>pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394

Iteration: 1
 Score =  179 bits (453), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/325 (34%), Positives = 172/325 (52%), Gaps = 18/325 (5%)
Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
            +VVI AA R+ I     G  K+    +L  PVL+  +++  + P EV ++++G  +   
Sbjct: 5   HNVVITAAVRSPIGTFG-GALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQR- 62
Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
           +  A   R AA  AGFP+TV   T+ RQ SSG+QA+   A  I+ G+ ++ +A G+E+M+
Sbjct: 63  TDEANTARTAALAAGFPDTVTGYTIQRQXSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMS 122
Query: 169 VNSISV----VGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXX 218
            +  ++     GQ     EI     + L      + MG T+EN+ +++ +TR+EQD    
Sbjct: 123 SSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVAL 182
Query: 219 XXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
                       G F D+I+P+  K         K V  S D+  R + T   LA LKPA
Sbjct: 183 RSHTLALKAIESGYFDDQIVPITIK------ERRKEVVFSKDEHPRADITAEKLAGLKPA 236
Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAV 338
           F+KDG+ TAGNAS ++DG+  ++LM    A +KGL  L     +S  GVDP +MGIGPA 
Sbjct: 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAP 296
Query: 339 AIPAAVKSAGLQIDDINLFEINEVL 363
           AI   ++     ++D +L EINE  
Sbjct: 297 AIRKGLEKVDWSLEDADLLEINEAF 321

>pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401

Iteration: 1
 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/334 (35%), Positives = 168/334 (50%), Gaps = 31/334 (9%)
Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           +  IV A RT I K   G       DDLLA  L  +++++ +   EV D+  G     G 
Sbjct: 3   EAWIVEAVRTPIGKHG-GALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
                 RMA   AGFP  V   TVNR C SGL+AVA  A AI AG   + I +G+ESM+ 
Sbjct: 62  DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121
Query: 170 NSISV------------------VGQ--VNPKVEIFTQARDCLLPMGITSENVAQRFGVT 209
              +V                  +G   VNPK++           MG T+EN+A+ +G+ 
Sbjct: 122 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTES----MGETAENLAEMYGIR 177
Query: 210 RQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTI 269
           R+EQD                G+F+DE++PV  K      G E+ + +  D+G R +T++
Sbjct: 178 REEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVK-----RGKEE-ILVEQDEGPRRDTSL 231
Query: 270 ADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP 329
             LA L+P F++ GT TAGN+S ++DGA AVLL+    A   GL  L   R+ +  GV P
Sbjct: 232 EKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP 291
Query: 330 SVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL 363
            +MGIGP  A   A++ AGL   D+ L E+NE  
Sbjct: 292 RIMGIGPVPATRKALERAGLSFSDLGLIELNEAF 325

>pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392

Iteration: 1
 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 174/323 (53%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389

Iteration: 1
 Score =  178 bits (452), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 174/323 (53%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 2   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 59
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 60  GQNPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 119
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 120 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 179
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 180 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 233
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 234 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 293
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 294 RKALERAGWKIGDLDLVEANEAF 316

>pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392

Iteration: 1
 Score =  178 bits (451), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 174/323 (53%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GQNPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  178 bits (451), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 174/323 (53%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GQNPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  178 bits (451), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 174/323 (53%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GQNPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  178 bits (451), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 174/323 (53%), Gaps = 18/323 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL P   
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVL-PAGE 62
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
                R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 63  GQNPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFEINEVL 363
             A++ AG +I D++L E NE  
Sbjct: 297 RKALERAGWKIGDLDLVEANEAF 319

>pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  178 bits (451), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/318 (37%), Positives = 174/318 (54%), Gaps = 18/318 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 64  QN-PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFE 358
             A++ AG +I D++L E
Sbjct: 297 RKALERAGWKIGDLDLVE 314

>pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/318 (37%), Positives = 173/318 (54%), Gaps = 18/318 (5%)
Query: 51  VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGST 110
           +VI +A RTA+  +  G F +T A +L A V+ AV+E+  +   EV ++++G VL  G  
Sbjct: 5   IVIASAARTAV-GSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEG 63
Query: 111 RAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN 170
           +    R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM++ 
Sbjct: 64  QN-PARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQIATGDASIIVAGGMESMSMA 122
Query: 171 SISVVGQVNPKVEIF----TQARDCL------LPMGITSENVAQRFGVTRQEQDLXXXXX 220
                 +   K+  F    T  +D L        MG T+ENVA+++ ++R EQD      
Sbjct: 123 PHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVAS 182
Query: 221 XXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK 280
                     G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PAF 
Sbjct: 183 QNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPAFD 236
Query: 281 KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP  A 
Sbjct: 237 KEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPAS 296
Query: 341 PAAVKSAGLQIDDINLFE 358
             A++ AG +I D++L E
Sbjct: 297 RKALERAGWKIGDLDLVE 314

>pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396

Iteration: 1
 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/325 (35%), Positives = 172/325 (52%), Gaps = 19/325 (5%)
Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           +VVI +A RTA+     G FK   A +L     K  I++  + P  + + ++G VL  G 
Sbjct: 8   EVVIASAARTAVGSFG-GAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66
Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
            + +  R  A  AG P   P  T+N  C SGL++V+  +  I  G  DI +  G E+M++
Sbjct: 67  GQNI-ARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSM 125
Query: 170 N-----SISVVGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLXXX 218
           +     S     ++     + +  +D L        MGIT+EN+A+++ +TR+EQD    
Sbjct: 126 SPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELAL 185
Query: 219 XXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
                       GKF +EI+PV  K     T V+K      D+ I+P TT+  LAKL+PA
Sbjct: 186 ASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDK------DEYIKPGTTMEKLAKLRPA 239
Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAV 338
           FKKDGT TAGNAS ++DGA  +++M +  A + G+  L    S+   GVDP +MG GP  
Sbjct: 240 FKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVP 299
Query: 339 AIPAAVKSAGLQIDDINLFEINEVL 363
           A   A+++A + I+DI+L E NE  
Sbjct: 300 ATKKALEAANMTIEDIDLVEANEAF 324

>pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397

Iteration: 1
 Score =  168 bits (425), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 181/342 (52%), Gaps = 32/342 (9%)
Query: 46  AFDDDVVIVAAYRTAICKAKRGGFKDTLA----DDLLAPVLKAVIEKTRLNPSEVGDIVV 101
           A  D VVIV+A RT I     G F   LA     DL + V+K V+++  + P +V +++ 
Sbjct: 3   AGSDPVVIVSAARTII-----GSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIF 57
Query: 102 GTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIA 161
           G VLA G  +    R A+  AG P +VP  +      SGL+AV     +I  G   I +A
Sbjct: 58  GHVLAAGCGQN-PVRQASVGAGIPYSVPAWSCQMIXGSGLKAVCLAVQSIGIGDSSIVVA 116
Query: 162 AGLESMT-------VNSISVVGQVNPKVEIFTQA-----RDCLLPMGITSENVAQRFGVT 209
            G+E+M+       + +   +G++     I          +C   MGIT+ENVA+++ V+
Sbjct: 117 GGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC--HMGITAENVAKKWQVS 174
Query: 210 RQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTI 269
           R++QD                G F  EI+PV   +V  + G+   + +  D+  R  + I
Sbjct: 175 REDQDKVAVLSQNRTENAQKAGHFDKEIVPV---LVSTRKGL---IEVKTDEFPRHGSNI 228
Query: 270 ADLAKLKPAFKKDGT--TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV 327
             ++KLKP F  DGT   T  NAS ++DGA AV+LMK+S A ++GL  L    S+S VGV
Sbjct: 229 EAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV 288
Query: 328 DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAA 369
           +PS+MGIGP  AI  AV  AG  ++D+++FEINE    + AA
Sbjct: 289 EPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAA 330

>pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387

Iteration: 1
 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/321 (34%), Positives = 154/321 (47%), Gaps = 9/321 (2%)
Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAP 107
           + VVIV A RT   ++K G F++  A+DL A + ++++ +   L  + + DI  G V   
Sbjct: 2   EQVVIVDAIRTPXGRSKGGAFRNVRAEDLSAHLXRSLLARNPSLTAATLDDIYWGCVQQT 61
Query: 108 GSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167
                   R AA  A  P +VP  TVNR C S  QA+ D A  I  G   + +  G+E  
Sbjct: 62  LEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSXQALHDAARXIXTGDAQVCLVGGVEHX 121
Query: 168 TVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXXXXXXXX 227
                S     +P +             G+T+E +++  G++R+ QD             
Sbjct: 122 GHVPXSHGVDFHPGLS--RNVAKAAGXXGLTAEXLSRLHGISREXQDQFAARSHARAWAA 179
Query: 228 XXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTT 286
              G FK EIIP      D   GV K+   + D+ IRP TT+  L+ L+PAF    GT T
Sbjct: 180 TQSGAFKTEIIPTGGHDAD---GVLKQ--FNYDEVIRPETTVEALSTLRPAFDPVSGTVT 234
Query: 287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKS 346
           AG +S +SDGA A L+   S A + GL      RS + VG DPS+ G GP  A   A+K 
Sbjct: 235 AGTSSALSDGAAAXLVXSESRARELGLKPRARIRSXAVVGCDPSIXGYGPVPASKLALKK 294
Query: 347 AGLQIDDINLFEINEVLVPII 367
           AGL   DI++FE NE     I
Sbjct: 295 AGLSASDIDVFEXNEAFAAQI 315

>pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 167/345 (48%), Gaps = 33/345 (9%)
Query: 44  KPAFDDDVVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDI 99
           KP   + VVIV+A RT I     G F  +L    A  L +  ++  IEK  +   EV + 
Sbjct: 4   KPTLKE-VVIVSATRTPI-----GSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEA 57
Query: 100 VVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIG 159
            +G VL  G  +A   R A   AG P + P  T+N+ C+SG++A+   + ++  G  D+ 
Sbjct: 58  YMGNVLQGGEGQA-PTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVM 116
Query: 160 IAAGLESMT-----VNSISV-VGQVNPKVEIFTQARDCL------LPMGITSENVAQRFG 207
           +A G+ESM+     +N  S   G V  K+E     +D L      + MG  +EN A++  
Sbjct: 117 VAGGMESMSNVPYVMNRGSTPYGGV--KLEDLI-VKDGLTDVYNKIHMGSCAENTAKKLN 173
Query: 208 VTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNT 267
           + R EQD                GKF +E+IPV   +       +  V +  D+  +   
Sbjct: 174 IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKG-----QPDVVVKEDEEYK-RV 227
Query: 268 TIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG 326
             + + KLK  F+K+ GT TA NAS ++DGA A++LM    A +  +  L    +F+   
Sbjct: 228 DFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA 287
Query: 327 VDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
           V+P    I P  A    +K  GL+ +DI ++E+NE    ++ ANI
Sbjct: 288 VEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANI 332

>pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 166/345 (48%), Gaps = 33/345 (9%)
Query: 44  KPAFDDDVVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDI 99
           KP   + VVIV+A RT I     G F  +L    A  L +  ++  IEK  +   EV + 
Sbjct: 4   KPTLKE-VVIVSATRTPI-----GSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEA 57
Query: 100 VVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIG 159
            +G VL  G  +A   R A   AG P + P  T+N+  +SG++A+   + ++  G  D+ 
Sbjct: 58  YMGNVLQGGEGQA-PTRQAVLGAGLPISTPCTTINKVXASGMKAIMMASQSLMCGHQDVM 116
Query: 160 IAAGLESMT-----VNSISV-VGQVNPKVEIFTQARDCL------LPMGITSENVAQRFG 207
           +A G+ESM+     +N  S   G V  K+E     +D L      + MG  +EN A++  
Sbjct: 117 VAGGMESMSNVPYVMNRGSTPYGGV--KLEDLI-VKDGLTDVYNKIHMGSCAENTAKKLN 173
Query: 208 VTRQEQDLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNT 267
           + R EQD                GKF +E+IPV   +       +  V +  D+  +   
Sbjct: 174 IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKG-----QPDVVVKEDEEYK-RV 227
Query: 268 TIADLAKLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG 326
             + + KLK  F+K+ GT TA NAS ++DGA A++LM    A +  +  L    +F+   
Sbjct: 228 DFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA 287
Query: 327 VDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
           V+P    I P  A    +K  GL+ +DI ++E+NE    ++ ANI
Sbjct: 288 VEPIDFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANI 332

>pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 164/339 (48%), Gaps = 32/339 (9%)
Query: 50  DVVIVAAYRTAICKAKRGGFKDTL----ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL 105
           +VVIV+A RT I     G F  +L    A  L +  ++  IEK  +   EV +  +G VL
Sbjct: 20  EVVIVSATRTPI-----GSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVL 74
Query: 106 APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLE 165
             G  +A   R A   AG P + P  T+N+  +SG++A+   + ++  G  D+ +A G+E
Sbjct: 75  QGGEGQA-PTRQAVLGAGLPISTPCTTINKVXASGMKAIMMASQSLMCGHQDVMVAGGME 133
Query: 166 SMT-----VNSISV-VGQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQ 213
           SM+     +N  S   G V  K+E     +D L      + MG  +EN A++  + R EQ
Sbjct: 134 SMSNVPYVMNRGSTPYGGV--KLEDLI-VKDGLTDVYNKIHMGSCAENTAKKLNIARNEQ 190
Query: 214 DLXXXXXXXXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273
           D                GKF +E+IPV   +       +  V +  D+  +     + + 
Sbjct: 191 DAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKG-----QPDVVVKEDEEYK-RVDFSKVP 244
Query: 274 KLKPAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM 332
           KLK  F+K+ GT TA NAS ++DGA A++LM    A +  +  L    +F+   V+P   
Sbjct: 245 KLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDF 304
Query: 333 GIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
            I P  A    +K  GL+ +DI ++E+NE    ++ ANI
Sbjct: 305 PIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANI 343

>pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 152/347 (43%), Gaps = 37/347 (10%)
Query: 46  AFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTV 104
           +  ++  I  A RT   K K G   +    +L+  ++  +  +   L+ + + D+++G V
Sbjct: 4   SMSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVV 63
Query: 105 LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
              G       R A   AG PET     +NR C+SGL+AV   A  +++G  D+ +A G+
Sbjct: 64  SPVGDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGV 123
Query: 165 ESMT---VNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLXXXXXX 221
           ESM+   + S       +P+    T  R   +P GI ++ +A   G +R++ D       
Sbjct: 124 ESMSRVPMGSDGGAWATDPE----TNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQ 179
Query: 222 XXXXXXXXXGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAF-- 279
                    G F   ++PV  +           V +  D+ +RP+TT+  LAKLK AF  
Sbjct: 180 QKAAAAWSGGYFAKSVVPVRDQ--------NGLVILDHDEHMRPDTTMEGLAKLKTAFDG 231
Query: 280 -------------------KKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFR 320
                              K +   T GN+S + DGA  VL+        +GL       
Sbjct: 232 VGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIV 291
Query: 321 SFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPII 367
           + +  G DP +M  GP  A    +  AGL IDDI+LFE+NE    ++
Sbjct: 292 ATATSGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVV 338

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	374
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	1e-175
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	1e-169
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	1e-157
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	1e-119
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	1e-118
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	1e-108
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	1e-108
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	1e-106
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	1e-105
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	1e-103
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	1e-103
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	2e-98
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	5e-88
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	3e-04

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442

 Score =  494 bits (1274), Expect = e-175
 Identities = 259/337 (76%), Positives = 295/337 (87%)

Query: 25  SPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKA 84
              +      AG++A Y R   + DDVVIVAA+RT +CK+KRG FKDT  DDLLAPVL+A
Sbjct: 6   HHHVDDDDKMAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRA 65

Query: 85  VIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAV 144
           +IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAAFYAGFPETV +RTVNRQCSSGLQAV
Sbjct: 66  LIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAV 125

Query: 145 ADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ 204
           ADVA AIKAG YDIGI AGLESMT N ++  G VNP V+ F QA++CLLPMG+TSENVAQ
Sbjct: 126 ADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQ 185

Query: 205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIR 264
           RFGV+RQEQD AAV+SHR+AAAATA+GKFKDEIIPV TK+VDPKTG EK +T+SVDDGIR
Sbjct: 186 RFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIR 245

Query: 265 PNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSA 324
           P TT+A L KLKP FKKDGTTTAGN+SQVSDGAGAVLLMKRS+A+QKGLP+LGVFR+F+A
Sbjct: 246 PTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAA 305

Query: 325 VGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
           VGVDP++MGIGPAVAIPAAVK+AGL++DDI+LFEINE
Sbjct: 306 VGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINE 342

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418

 Score =  477 bits (1230), Expect = e-169
 Identities = 180/350 (51%), Positives = 242/350 (69%), Gaps = 10/350 (2%)

Query: 12  LQHLQPSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTAICKAKRGGFKD 71
           + H    SS          +     ++           DVV+V   RTAIC+A RGGFKD
Sbjct: 1   MHHHHHHSSGVD-----LGTENLYFQSMAPQASA---ADVVVVHGRRTAICRAGRGGFKD 52

Query: 72  TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR 131
           T  D+LL+ V+ AV++   L P ++GDI VG VL PG+  A+  R+A F +  PETVPL 
Sbjct: 53  TTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPETVPLS 111

Query: 132 TVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDC 191
           TVNRQCSSGLQAVA +A  I+ G YDIG+A G+ESM++      G +  ++    +ARDC
Sbjct: 112 TVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDC 171

Query: 192 LLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGV 251
           L+PMGITSENVA+RFG++R++QD  A+ S ++AA A + G F+ EI+PV T + D K G 
Sbjct: 172 LIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GT 230

Query: 252 EKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQK 311
           ++ +T++ D+GIRP+TT+  LAKLKPAFKKDG+TTAGN+SQVSDGA A+LL +RS A + 
Sbjct: 231 KRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEEL 290

Query: 312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
           GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL + D+++FEINE
Sbjct: 291 GLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINE 340

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393

 Score =  446 bits (1150), Expect = e-157
 Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 18/321 (5%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK----TRLNPSEVGDIVVGTV 104
           +DVVIVAA R+AI K  +G FKD   D LL   L   I +     R + + + ++  G V
Sbjct: 10  EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69

Query: 105 LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
           L  G+  A E R A   +G P + P   +NRQCSSGL AV D+A  IK G  DIG+A G+
Sbjct: 70  LNVGA-GATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128

Query: 165 ESMTVNSIS---VVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESH 221
           ESMT N  +   +    + +++   +A+ CL+PMGIT+ENVA  F ++R++QD  A  S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188

Query: 222 RRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
           ++A  A   G F+DEI+P+                   D+G RPN T   L+ ++PAF K
Sbjct: 189 QKAYKAKNEGLFEDEILPIKLP---------DGSICQSDEGPRPNVTAESLSSIRPAFIK 239

Query: 282 D-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAI 340
           D GTTTAGNASQVSDG   VLL +RS+A Q  LP+LG +  F  VGV P +MG+GPA AI
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAI 299

Query: 341 PAAVKSAGLQIDDINLFEINE 361
           P  +++ GLQ+ DI++FEINE
Sbjct: 300 PKVLEATGLQVQDIDIFEINE 320

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387

 Score =  349 bits (898), Expect = e-119
 Identities = 120/319 (37%), Positives = 168/319 (52%), Gaps = 19/319 (5%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPG 108
            VVIV A RT + ++K G F++  A+DL A ++++++ +   L  + + DI  G V    
Sbjct: 3   QVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTL 62

Query: 109 STRAMEC-----RMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163
                E      R AA  A  P +VP  TVNR C S +QA+ D A  I  G   + +  G
Sbjct: 63  -----EQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGG 117

Query: 164 LESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRR 223
           +E M    +S     +P   +          MG+T+E +++  G++R+ QD  A  SH R
Sbjct: 118 VEHMGHVPMSHGVDFHPG--LSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHAR 175

Query: 224 AAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-D 282
           A AAT SG FK EIIP      D           + D+ IRP TT+  L+ L+PAF    
Sbjct: 176 AWAATQSGAFKTEIIPTGGHDADGVL-----KQFNYDEVIRPETTVEALSTLRPAFDPVS 230

Query: 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPA 342
           GT TAG +S +SDGA A+L+M  S A + GL      RS + VG DPS+MG GP  A   
Sbjct: 231 GTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKL 290

Query: 343 AVKSAGLQIDDINLFEINE 361
           A+K AGL   DI++FE+NE
Sbjct: 291 ALKKAGLSASDIDVFEMNE 309

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390

 Score =  348 bits (895), Expect = e-118
 Identities = 121/319 (37%), Positives = 178/319 (55%), Gaps = 19/319 (5%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPG 108
           DVVIV   RT + ++K G  ++T A+D+ A ++  V+E+ ++++P EV D++ G V    
Sbjct: 6   DVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTL 65

Query: 109 STRAMEC-----RMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAG 163
                E      RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G
Sbjct: 66  -----EQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGG 120

Query: 164 LESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRR 223
           +E M    +S++  V+P   +   A      MG+T+E + +  G++R++QD  AV SH+ 
Sbjct: 121 VEHMG--HVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQL 178

Query: 224 AAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KD 282
           A  AT  GKFKDEIIP+  +  D             D+ IRP+TT+  LA LKPAF  K 
Sbjct: 179 AHKATVEGKFKDEIIPM--QGYDEN---GFLKIFDYDETIRPDTTLESLAALKPAFNPKG 233

Query: 283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPA 342
           GT TAG +SQ++DGA  +++M    A   GL  L V RS +  GVDP++MG GP  A   
Sbjct: 234 GTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQK 293

Query: 343 AVKSAGLQIDDINLFEINE 361
           A+K AGL + DI+  E+NE
Sbjct: 294 ALKRAGLNMADIDFIELNE 312

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401

 Score =  322 bits (827), Expect = e-108
 Identities = 123/332 (37%), Positives = 174/332 (52%), Gaps = 31/332 (9%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           +  IV A RT I K   G       DDLLA  L  +++++ +   EV D+  G     G 
Sbjct: 3   EAWIVEAVRTPIGKHG-GALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT- 168
                 RMA   AGFP  V   TVNR C SGL+AVA  A AI AG   + I +G+ESM+ 
Sbjct: 62  DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121

Query: 169 -------------------VNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVT 209
                               ++      VNPK+    QA      MG T+EN+A+ +G+ 
Sbjct: 122 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKM----QALYGTESMGETAENLAEMYGIR 177

Query: 210 RQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTI 269
           R+EQD  A+ SH++A  A   G+F+DE++PV  K        ++ + +  D+G R +T++
Sbjct: 178 REEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVK------RGKEEILVEQDEGPRRDTSL 231

Query: 270 ADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP 329
             LA L+P F++ GT TAGN+S ++DGA AVLL+    A   GL  L   R+ +  GV P
Sbjct: 232 EKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP 291

Query: 330 SVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
            +MGIGP  A   A++ AGL   D+ L E+NE
Sbjct: 292 RIMGIGPVPATRKALERAGLSFSDLGLIELNE 323

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394

 Score =  320 bits (824), Expect = e-108
 Identities = 119/323 (36%), Positives = 178/323 (55%), Gaps = 20/323 (6%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           +VVI AA R+ I     G  K+    +L  PVL+  +++  + P EV ++++G  +    
Sbjct: 6   NVVITAAVRSPIGTFG-GALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD 64

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
                 R AA  AGFP+TV   T+ RQCSSG+QA+   A  I+ G+ ++ +A G+E+M+ 
Sbjct: 65  EANT-ARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMS- 122

Query: 170 NSISVV-----GQVNPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLAAV 218
           +S   +     GQ     EI     + L      + MG T+EN+ +++ +TR+EQD  A+
Sbjct: 123 SSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVAL 182

Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
            SH  A  A  SG F D+I+P+  K    +      V  S D+  R + T   LA LKPA
Sbjct: 183 RSHTLALKAIESGYFDDQIVPITIKE---RRKE---VVFSKDEHPRADITAEKLAGLKPA 236

Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAV 338
           F+KDG+ TAGNAS ++DG+  ++LM    A +KGL  L     +S  GVDP +MGIGPA 
Sbjct: 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAP 296

Query: 339 AIPAAVKSAGLQIDDINLFEINE 361
           AI   ++     ++D +L EINE
Sbjct: 297 AIRKGLEKVDWSLEDADLLEINE 319

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396

 Score =  316 bits (813), Expect = e-106
 Identities = 118/325 (36%), Positives = 176/325 (54%), Gaps = 23/325 (7%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           +VVI +A RTA+     G FK   A +L     K  I++  + P  + + ++G VL  G 
Sbjct: 8   EVVIASAARTAVGSFG-GAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL 66

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
            + +  R  A  AG P   P  T+N  C SGL++V+  +  I  G  DI +  G E+M+ 
Sbjct: 67  GQNI-ARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMS- 124

Query: 170 NSISVVGQV-------NPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLA 216
            S  +V          +    + +  +D L        MGIT+EN+A+++ +TR+EQD  
Sbjct: 125 MSPYLVPSARYGARMGDAAF-VDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDEL 183

Query: 217 AVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK 276
           A+ S  +A  A A GKF +EI+PV   I   K        +  D+ I+P TT+  LAKL+
Sbjct: 184 ALASQNKAEKAQAEGKFDEEIVPV--VIKGRK----GDTVVDKDEYIKPGTTMEKLAKLR 237

Query: 277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGP 336
           PAFKKDGT TAGNAS ++DGA  +++M +  A + G+  L    S+   GVDP +MG GP
Sbjct: 238 PAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGP 297

Query: 337 AVAIPAAVKSAGLQIDDINLFEINE 361
             A   A+++A + I+DI+L E NE
Sbjct: 298 VPATKKALEAANMTIEDIDLVEANE 322

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395

 Score =  314 bits (808), Expect = e-105
 Identities = 127/324 (39%), Positives = 183/324 (56%), Gaps = 20/324 (6%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           DVVIV+A RT I     G FK+T A  L    +K  I +  LN SE+ ++++G VL  G 
Sbjct: 6   DVVIVSAVRTPIGSFG-GVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL 64

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
            + +  R  A  AG P +VP  TVN+ C SGL++V   A +I +G  D+ IA G E+M+ 
Sbjct: 65  GQNV-ARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMS- 122

Query: 170 NSISVVGQV------NPKVEIFTQARDCL------LPMGITSENVAQRFGVTRQEQDLAA 217
            +  +V              + +   D L        MGIT+EN+A +F  TR+ QD  A
Sbjct: 123 QAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLA 182

Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
           +ES  +A  A  + +FK+EI+PV   ++  +  +    TI  D+  +   T   L+KLKP
Sbjct: 183 LESQNKAENAIKNNRFKEEIVPV--DVLIRRGKI---ETIDKDEYPKLGMTFEGLSKLKP 237

Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
           AFKKDGT TAGNAS ++DGA  ++LM +  A + G+  L   +S+++ GV+P VMG GP 
Sbjct: 238 AFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPI 297

Query: 338 VAIPAAVKSAGLQIDDINLFEINE 361
            A   A+K AGL I+DI+L E NE
Sbjct: 298 PATRKALKKAGLSINDIDLIEANE 321

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392

 Score =  308 bits (791), Expect = e-103
 Identities = 123/324 (37%), Positives = 178/324 (54%), Gaps = 20/324 (6%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
             +VI +A RTA+     G F +T A +L A V+ AV+E+  +   EV ++++G VL  G
Sbjct: 3   PSIVIASAARTAVGSFN-GAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAG 61

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
             +    R AA  AG P+      +N+ C SGL+AVA     I  G   I +A G+ESM+
Sbjct: 62  EGQNP-ARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMS 120

Query: 169 VNSISVVGQVNPKVEIFTQARDCLL-----------PMGITSENVAQRFGVTRQEQDLAA 217
             +               +  D ++            MG T+ENVA+++ ++R EQD  A
Sbjct: 121 -MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFA 179

Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
           V S  +A AA   G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+P
Sbjct: 180 VASQNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRP 233

Query: 278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
           AF K+GT TAGNAS ++DGA A LLM  + A ++G+  LG   S++ VGVDP VMG GP 
Sbjct: 234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPI 293

Query: 338 VAIPAAVKSAGLQIDDINLFEINE 361
            A   A++ AG +I D++L E NE
Sbjct: 294 PASRKALERAGWKIGDLDLVEANE 317

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407

 Score =  308 bits (791), Expect = e-103
 Identities = 101/337 (29%), Positives = 155/337 (45%), Gaps = 37/337 (10%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIE-KTRLNPSEVGDIVVGTVLAPG 108
           +  I  A RT   K K G   +    +L+  ++  +      L+ + + D+++G V   G
Sbjct: 8   EAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVG 67

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  R A   AG PET     +NR C+SGL+AV   A  +++G  D+ +A G+ESM+
Sbjct: 68  DQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMS 127

Query: 169 ---VNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAA 225
              + S       +P+    T  R   +P GI ++ +A   G +R++ D  A+ S ++AA
Sbjct: 128 RVPMGSDGGAWATDPE----TNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAA 183

Query: 226 AATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTT 285
           AA + G F   ++PV              V +  D+ +RP+TT+  LAKLK AF   G  
Sbjct: 184 AAWSGGYFAKSVVPV--------RDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEM 235

Query: 286 ---------------------TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSA 324
                                T GN+S + DGA  VL+        +GL       + + 
Sbjct: 236 GGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATAT 295

Query: 325 VGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE 361
            G DP +M  GP  A    +  AGL IDDI+LFE+NE
Sbjct: 296 SGSDPVIMLTGPTPATRKVLDRAGLTIDDIDLFELNE 332

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397

 Score =  296 bits (761), Expect = 2e-98
 Identities = 119/326 (36%), Positives = 175/326 (53%), Gaps = 22/326 (6%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
           D VVIV+A RT I     G        DL + V+K V+++  + P +V +++ G VLA G
Sbjct: 6   DPVVIVSAARTIIGSFN-GALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAG 64

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
             +    R A+  AG P +VP  +    C SGL+AV     +I  G   I +A G+E+M+
Sbjct: 65  CGQNP-VRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMS 123

Query: 169 VNSISVVG-----QVNPKVEIFTQARDCLL------PMGITSENVAQRFGVTRQEQDLAA 217
             +  +       ++       +   D L        MGIT+ENVA+++ V+R++QD  A
Sbjct: 124 -KAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVA 182

Query: 218 VESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP 277
           V S  R   A  +G F  EI+PV           +  + +  D+  R  + I  ++KLKP
Sbjct: 183 VLSQNRTENAQKAGHFDKEIVPVLVS------TRKGLIEVKTDEFPRHGSNIEAMSKLKP 236

Query: 278 AFKKDGTT--TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIG 335
            F  DGT   T  NAS ++DGA AV+LMK+S A ++GL  L    S+S VGV+PS+MGIG
Sbjct: 237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIG 296

Query: 336 PAVAIPAAVKSAGLQIDDINLFEINE 361
           P  AI  AV  AG  ++D+++FEINE
Sbjct: 297 PIPAIKQAVTKAGWSLEDVDIFEINE 322

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395

 Score =  270 bits (692), Expect = 5e-88
 Identities = 101/324 (31%), Positives = 163/324 (50%), Gaps = 20/324 (6%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
            +VVIV+A RT I     G      A  L +  ++  IEK  +   EV +  +G VL  G
Sbjct: 8   KEVVIVSATRTPIGSF-LGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGG 66

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
             +A   R A   AG P + P  T+N+ C+SG++A+   + ++  G  D+ +A G+ESM+
Sbjct: 67  EGQA-PTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMS 125

Query: 169 VNSISVVGQVNPK---VEIF-TQARDCL------LPMGITSENVAQRFGVTRQEQDLAAV 218
            N   V+ + +     V++     +D L      + MG  +EN A++  + R EQD  A+
Sbjct: 126 -NVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAI 184

Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
            S+ R+ AA  +GKF +E+IPV            +   +  +D        + + KLK  
Sbjct: 185 NSYTRSKAAWEAGKFGNEVIPVTVT------VKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238

Query: 279 FKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPA 337
           F+K+ GT TA NAS ++DGA A++LM    A +  +  L    +F+   V+P    I P 
Sbjct: 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPV 298

Query: 338 VAIPAAVKSAGLQIDDINLFEINE 361
            A    +K  GL+ +DI ++E+NE
Sbjct: 299 YAASMVLKDVGLKKEDIAMWEVNE 322

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 8e-05
 Identities = 59/395 (14%), Positives = 107/395 (27%), Gaps = 137/395 (34%)

Query: 41  YHRK---PAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVG 97
           Y  K     F+D  V                 KD    D+   +L            E+ 
Sbjct: 16  YQYKDILSVFEDAFV------------DNFDCKDVQ--DMPKSILSK---------EEID 52

Query: 98  DIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVAD-VATAIKAGLY 156
            I++                    +    +  LR      S   + V   V   ++   Y
Sbjct: 53  HIIM--------------------SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN-Y 91

Query: 157 DIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG---VTRQEQ 213
              + + +++          Q +    ++ + RD L        N  Q F    V+R + 
Sbjct: 92  KF-LMSPIKTEQR-------QPSMMTRMYIEQRDRL-------YNDNQVFAKYNVSRLQP 136

Query: 214 DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRV-TISV----------DDG 262
                   R+A           E+ P    ++D   G  K    + V          D  
Sbjct: 137 ----YLKLRQALL---------ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 263 I---------RPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 313
           I          P T +  L KL      + T+ + ++S +     ++    R L   K  
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 314 P----IL------GVFRSFSAVGV-------DPSVM-GIGPAVAIPAAVK--SAGLQIDD 353
                +L        + +F+ +            V   +  A     ++   S  L  D+
Sbjct: 244 ENCLLVLLNVQNAKAWNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 354 -INLF----------------EINEVLVPIIAANI 371
             +L                   N   + IIA +I
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 7/66 (10%)

Query: 294  SDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVG-------VDPSVMGIGPAVAIPAAVKS 346
            + GAG  ++M+  LA++ G+PI G+    +            P    +  A    ++VK 
Sbjct: 1180 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKY 1239

Query: 347  AGLQID 352
            A   ++
Sbjct: 1240 ASPNLN 1245

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	374
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	100.0
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	100.0
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	100.0
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	100.0
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	100.0
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	100.0
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	100.0
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	100.0
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	100.0
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	100.0
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	100.0
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	100.0
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	100.0
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	100.0
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	99.93
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	99.92
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	99.91
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	99.9
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	99.9
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	99.9
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	99.9
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	99.9
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	99.9
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	99.9
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	99.9
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	99.9
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	99.9
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	99.89
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	99.89
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	99.88
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	99.87
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	99.86
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	99.85
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	99.84
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.81
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	99.81
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.8
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	99.77
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.76
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.76
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.76
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.76
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.75
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.73
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.73
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.71
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	99.7
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	99.7
1u0m_A	382	Putative polyketide synthase; type III polyketide	99.69
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.68
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	99.68
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	99.66
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.66
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	99.66
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	99.66
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	99.65
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	99.64
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	99.63
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	99.62
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	99.6
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	99.57
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	99.56
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	99.53
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	99.52
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	99.52
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	99.52
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	99.51
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	99.5
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	99.5
3v7i_A	413	Putative polyketide synthase; type III polyketide	99.5
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	99.49
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	99.48
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	99.47
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	99.45
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	99.45
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.36
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	99.26
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	99.25
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	99.13
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	98.96
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	93.5
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	90.03
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	88.62
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	88.32
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	88.28
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	87.82
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	87.43
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	87.31
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	87.27
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	86.86
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	85.9
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	84.69
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	83.67
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	83.38
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	83.28
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	82.33
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	80.77
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	80.56

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=100.00  E-value=1.6e-58  Score=461.37  Aligned_cols=324  Identities=78%  Similarity=1.159  Sum_probs=276.5

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      +++|+|||+++|||+|..+|.+++.++.+|+.+|+++||+|+|+++++||.|++|+..+....++++++.++..+|++..
T Consensus        29 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~  108 (442)
T 2wu9_A           29 GDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPET  108 (442)
T ss_dssp             GGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTT
T ss_pred             CCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCC
Confidence            46799999999999984237788999999999999999999999999999999998765321234678999999999657


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      +|+++++++|+||+.+|.+|+++|++|++|++|++|+|+++..|+.......+.+............|++.+++|+++||
T Consensus       109 ~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~g  188 (442)
T 2wu9_A          109 VAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFG  188 (442)
T ss_dssp             SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHT
T ss_pred             ceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999877632111111111000011123478999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCcccc
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA  287 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~  287 (374)
                      +|||++++|++++|++|..|+.+|+|++||+|++++..+++....+..+++.||.+|+++|+|+|+++||+|+++||+|+
T Consensus       189 isre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~  268 (442)
T 2wu9_A          189 VSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTA  268 (442)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCG
T ss_pred             CCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeec
Confidence            99999999999999999999999999999999977422221111123478999999999999999999999988899999


Q ss_pred             CCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHH
Q 017289          288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPII  367 (374)
Q Consensus       288 ~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~  367 (374)
                      +|||+++|||++|||+|++.|+++|.+|+++|+|++..+++|..++.++..++++||++|||+++|||++|+||+|++++
T Consensus       269 ~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~~~  348 (442)
T 2wu9_A          269 GNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQF  348 (442)
T ss_dssp             GGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHTTCCGGGCCEEEECCSBHHHH
T ss_pred             hhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchhcchHHHHHHHHHHHHcCCCHHHCCEEEEeCCChHHH
Confidence            99999999999999999999999999999999999998888877777889999999999999999999999999999999


Q ss_pred             HHhh
Q 017289          368 AANI  371 (374)
Q Consensus       368 l~~~  371 (374)
                      ++++
T Consensus       349 l~~~  352 (442)
T 2wu9_A          349 VYCR  352 (442)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8875

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=100.00  E-value=7.1e-57  Score=443.51  Aligned_cols=316  Identities=39%  Similarity=0.539  Sum_probs=278.5

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dA-Gl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ++|+|||+++|||+|..+|.+++.++.+|+.+|+++||+|+ |+++++||.+++|+..+.+.+++++++.++..+|++..
T Consensus         2 ~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~   81 (387)
T 3goa_A            2 EQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHS   81 (387)
T ss_dssp             CCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTT
T ss_pred             CcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCC
Confidence            58999999999999853377889999999999999999999 99999999999999876654356889999999999767


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      +|+++|+++|+|++.+|..|+++|++|++|++||+|+|+|++.|+.......+.+.... ... ...|++.+++|+++||
T Consensus        82 ~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~a~~~~~~~g  159 (387)
T 3goa_A           82 VPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNV-AKA-AGMMGLTAEMLSRLHG  159 (387)
T ss_dssp             SCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC---------CCCHHHHHHHHHHTT
T ss_pred             CcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCccccccc-ccc-cccHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999887642212222221111 111 4578999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-CCccc
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTTT  286 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-~~~lt  286 (374)
                      +|+|++++|++++|++|.+|+.+|+|++||+|++++..+     .++.+++.|+.+|+++|+|+|+++||+|++ +|++|
T Consensus       160 ~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~-----~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t  234 (387)
T 3goa_A          160 ISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDAD-----GVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVT  234 (387)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTT-----SCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeecccc-----CcccccccccccCCCCCHHHHhcCCCcccCCCCcee
Confidence            999999999999999999999999999999999876321     122468999999999999999999999988 89999


Q ss_pred             cCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhH
Q 017289          287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPI  366 (374)
Q Consensus       287 ~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~  366 (374)
                      ++|||+++||++++||++++.|+++|.+|+++|.|++..+++|..+..++..+++++|+++|++++|||++|+||+|+++
T Consensus       235 ~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~~  314 (387)
T 3goa_A          235 AGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQ  314 (387)
T ss_dssp             GGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHH
T ss_pred             cccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchHH
Confidence            99999999999999999999999999999999999999888888888899999999999999999999999999999999


Q ss_pred             HHHhh
Q 017289          367 IAANI  371 (374)
Q Consensus       367 ~l~~~  371 (374)
                      +++++
T Consensus       315 ~~~~~  319 (387)
T 3goa_A          315 ILPCI  319 (387)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88765

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=3.7e-57  Score=447.67  Aligned_cols=316  Identities=38%  Similarity=0.543  Sum_probs=274.4

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| +++.+.+.++.+|+.+|+++||+|+|+++++||.|++|+..+.....+++++.++..+|++..+
T Consensus         2 ~~v~Ivg~~rT~~~~-~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~   80 (401)
T 1ulq_A            2 PEAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV   80 (401)
T ss_dssp             -CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred             CceEEEEcccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence            479999999999998 4577789999999999999999999999999999999987665432467899999999996568


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc-----cCcCC-hhhhhh------cccc----cCC
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQVN-PKVEIF------TQAR----DCL  192 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~~-~~~~~~------~~~~----~~~  192 (374)
                      |+++++++|+||+.+|..|++.|++|++|++|++|+|+++..|+..     +.... ..+.+.      +.++    ...
T Consensus        81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~  160 (401)
T 1ulq_A           81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGT  160 (401)
T ss_dssp             EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCC
T ss_pred             cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccccccccc
Confidence            9999999999999999999999999999999999999999877532     11110 111000      0011    012


Q ss_pred             CchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHH
Q 017289          193 LPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADL  272 (374)
Q Consensus       193 ~~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~  272 (374)
                      ..|++.+++||++||+|+|++++|+++||++|.+|+.+|+|++||+|++++..      +...+++.|+.+|+++|+|+|
T Consensus       161 ~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~------~~~~~~~~d~~~r~~~t~e~~  234 (401)
T 1ulq_A          161 ESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRG------KEEILVEQDEGPRRDTSLEKL  234 (401)
T ss_dssp             CCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEET------TEEEEECSCSCCCTTCCHHHH
T ss_pred             chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCC------CCceeeccccccCCCCCHHHH
Confidence            45899999999999999999999999999999999999999999999977531      112568999999999999999


Q ss_pred             hcCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCC
Q 017289          273 AKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQID  352 (374)
Q Consensus       273 ~~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~  352 (374)
                      +++||+|+++||+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..++++||++||++++
T Consensus       235 ~~~rpif~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~  314 (401)
T 1ulq_A          235 AALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFS  314 (401)
T ss_dssp             HHSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGG
T ss_pred             hhCCCccCCCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccccchhHHHHHHHHHHHcCCCHH
Confidence            99999998889999999999999999999999999999999999999999998888877778899999999999999999


Q ss_pred             CccEEEecCcchhHHHHhh
Q 017289          353 DINLFEINEVLVPIIAANI  371 (374)
Q Consensus       353 DID~~ei~d~Fa~~~l~~~  371 (374)
                      |||++|+||||+++++.++
T Consensus       315 dId~ie~heafa~~~l~~~  333 (401)
T 1ulq_A          315 DLGLIELNEAFAAQALAVL  333 (401)
T ss_dssp             GCSEEEECCSBHHHHHHHH
T ss_pred             HcCEEEEecchHHHHHHHH
Confidence            9999999999999998865

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=100.00  E-value=1.1e-56  Score=443.54  Aligned_cols=316  Identities=37%  Similarity=0.523  Sum_probs=278.0

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      +++|+|||+++|||+| +.+.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... .+++++.++..+|++..
T Consensus         6 m~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~~~a~~v~~~lGl~~~   83 (396)
T 4dd5_A            6 MREVVIASAARTAVGS-FGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQNIARQIALGAGIPVE   83 (396)
T ss_dssp             CCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred             CCcEEEEEcccCCeee-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-CchHHHHHHHHcCCCCC
Confidence            4689999999999998 457788999999999999999999999999999999998876653 57899999999999767


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc-----CcC-Chhhh-----hhcccccCCCchH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV-----GQV-NPKVE-----IFTQARDCLLPMG  196 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~-----~~~-~~~~~-----~~~~~~~~~~~~~  196 (374)
                      +|+++++++|+|++.+|..|++.|++|++|+|||+|+|++++.|+...     ... +..+.     +..........|+
T Consensus        84 ~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (396)
T 4dd5_A           84 KPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMG  163 (396)
T ss_dssp             SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHH
T ss_pred             ceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHH
Confidence            999999999999999999999999999999999999999999776421     111 11111     1111122235799


Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCC
Q 017289          197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK  276 (374)
Q Consensus       197 ~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~  276 (374)
                      +.+++|+++||+|||++++|++++|+||.+|+.+|+|++||+|++++.++      .+.+++.|+.+|+++|+|+|+++|
T Consensus       164 ~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~l~~~~  237 (396)
T 4dd5_A          164 ITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRK------GDTVVDKDEYIKPGTTMEKLAKLR  237 (396)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----------CEEECSCSCCCTTCCHHHHHHCC
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCC------CceeecCcccccCCCCHHHHhhCC
Confidence            99999999999999999999999999999999999999999999876322      234689999999999999999999


Q ss_pred             CcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccE
Q 017289          277 PAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINL  356 (374)
Q Consensus       277 pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~  356 (374)
                      |+|+|+|++|++|||+++|||++|||++++.|+++|.+|+++|.|++..+++|..++.++..+++++|+++|++++|||+
T Consensus       238 ~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~  317 (396)
T 4dd5_A          238 PAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKIMGYGPVPATKKALEAANMTIEDIDL  317 (396)
T ss_dssp             BSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSE
T ss_pred             CccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCcccHHHHHHHHHHHHHcCCCHHHcCE
Confidence            99999999999999999999999999999999999999999999999888888887788999999999999999999999


Q ss_pred             EEecCcchhHHHHhh
Q 017289          357 FEINEVLVPIIAANI  371 (374)
Q Consensus       357 ~ei~d~Fa~~~l~~~  371 (374)
                      +|+||+|++..+++.
T Consensus       318 ve~~d~f~~~~~~~~  332 (396)
T 4dd5_A          318 VEANEAFAAQSVAVI  332 (396)
T ss_dssp             EEECCSBHHHHHHHH
T ss_pred             EEecChHHHHHHHHH
Confidence            999999999988764

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=100.00  E-value=4.7e-57  Score=445.56  Aligned_cols=318  Identities=46%  Similarity=0.689  Sum_probs=273.7

Q ss_pred             CCCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcC----CCccccCeEEEEeecCCCCCcccHHHHHH
Q 017289           44 KPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTR----LNPSEVGDIVVGTVLAPGSTRAMECRMAA  119 (374)
Q Consensus        44 m~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAG----l~~~~ID~vi~g~~~~~~~~~~~~a~~va  119 (374)
                      |..++++|+|||+++|||+|.++|.+++.++.+|+.+|+++||+|+|    +++++||.+++|+..+... ++++++.++
T Consensus         5 ~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~-~~~~a~~va   83 (393)
T 1afw_A            5 LEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAAC   83 (393)
T ss_dssp             TSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHHH
T ss_pred             hhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC-CChHHHHHH
Confidence            34445789999999999998424778899999999999999999999    9999999999998765432 457899999


Q ss_pred             HHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc---CChhhhhhcccccCCCchH
Q 017289          120 FYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ---VNPKVEIFTQARDCLLPMG  196 (374)
Q Consensus       120 ~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  196 (374)
                      ..+|++..+|+++++++|+||+.+|..|++.|++|++|++|++|+|+++..|+.....   ..+.+......+..+..|+
T Consensus        84 ~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~  163 (393)
T 1afw_A           84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMG  163 (393)
T ss_dssp             HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHH
T ss_pred             HHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHH
Confidence            9999965689999999999999999999999999999999999999988766532111   1111110000111235689


Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCC
Q 017289          197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK  276 (374)
Q Consensus       197 ~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~  276 (374)
                      +.+++|+++||+|||++++|++++|++|.+|+.+|+|++||+|++++.     +  +  ++++|+.+|+++|+|+|+++|
T Consensus       164 ~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~-----~--~--~~~~d~~~r~~~t~e~~~~~r  234 (393)
T 1afw_A          164 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD-----G--S--ICQSDEGPRPNVTAESLSSIR  234 (393)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT-----S--C--EECSCSSCCSCCCHHHHHHCC
T ss_pred             HHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccC-----C--c--eeccccccCCCCCHHHHhcCC
Confidence            999999999999999999999999999999999999999999997642     1  1  589999999999999999999


Q ss_pred             CcccCC-CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 017289          277 PAFKKD-GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN  355 (374)
Q Consensus       277 pi~~~~-~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID  355 (374)
                      |+|+++ ||+|++|||+++|||++|||+|+++|+++|.+|+++|+|++..+++|..++.++..++++||++||++++|||
T Consensus       235 pvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId  314 (393)
T 1afw_A          235 PAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDID  314 (393)
T ss_dssp             BSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCS
T ss_pred             CcccCCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCCHHHCC
Confidence            999877 8999999999999999999999999999999999999999998888877777889999999999999999999


Q ss_pred             EEEecCcchhHHHHhh
Q 017289          356 LFEINEVLVPIIAANI  371 (374)
Q Consensus       356 ~~ei~d~Fa~~~l~~~  371 (374)
                      ++|+||+|+++++.++
T Consensus       315 ~ve~h~~ft~~~l~~~  330 (393)
T 1afw_A          315 IFEINEAFAAQALYCI  330 (393)
T ss_dssp             EEEECCSBHHHHHHHH
T ss_pred             EEEEeccCHHHHHHHH
Confidence            9999999999998865

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=100.00  E-value=4e-56  Score=439.28  Aligned_cols=315  Identities=37%  Similarity=0.573  Sum_probs=278.6

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| +++.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... ++++++.++..+|++..+
T Consensus         5 ~~v~Ivg~~rT~~~~-~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~-~~~~a~~i~~~lGl~~~~   82 (394)
T 3ss6_A            5 HNVVITAAVRSPIGT-FGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD-EANTARTAALAAGFPDTV   82 (394)
T ss_dssp             CCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGG-GCSHHHHHHHHTTCCTTC
T ss_pred             ceEEEEEcccCCccc-cCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCc-cchHHHHHHHHcCCCCCc
Confidence            589999999999998 457788999999999999999999999999999999999876653 678999999999997679


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc-----cCcC-Chhhh----hhcccccCCCchHHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQV-NPKVE----IFTQARDCLLPMGIT  198 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~-~~~~~----~~~~~~~~~~~~~~~  198 (374)
                      |+++++++|+|++.+|..|+++|++|++|++||+|+|+++..|+..     +... +..+.    +....+.....|++.
T Consensus        83 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  162 (394)
T 3ss6_A           83 TGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGET  162 (394)
T ss_dssp             EEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHH
T ss_pred             eEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHH
Confidence            9999999999999999999999999999999999999999877632     1111 00110    111122234679999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCc
Q 017289          199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA  278 (374)
Q Consensus       199 a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi  278 (374)
                      +++|+++||+|+|++++|+++||++|.+|+.+|+|++||+|++++.++      ...++++|+.+|+++|+|+++++||+
T Consensus       163 a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~------~~~~~~~d~~~R~~~t~e~~~~~~pv  236 (394)
T 3ss6_A          163 AENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERR------KEVVFSKDEHPRADITAEKLAGLKPA  236 (394)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSS------CEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCC------CceeecccccccCCCCHHHHhhCCCc
Confidence            999999999999999999999999999999999999999999886321      12468999999999999999999999


Q ss_pred             ccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       279 ~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                      |+++|++|++|||+++||++++||++++.|+++|.+|+++|.|++..+.+|..++.++..+++++|+++|++++|||++|
T Consensus       237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ve  316 (394)
T 3ss6_A          237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKIMGIGPAPAIRKGLEKVDWSLEDADLLE  316 (394)
T ss_dssp             SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred             cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCccchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence            99889999999999999999999999999999999999999999998888888888899999999999999999999999


Q ss_pred             ecCcchhHHHHhh
Q 017289          359 INEVLVPIIAANI  371 (374)
Q Consensus       359 i~d~Fa~~~l~~~  371 (374)
                      +||+|++.++++.
T Consensus       317 ~~d~fa~~~~~~~  329 (394)
T 3ss6_A          317 INEAFAAQYLAVE  329 (394)
T ss_dssp             ECCSBHHHHHHHH
T ss_pred             eCCchHHHHHHHH
Confidence            9999999988765

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=100.00  E-value=2.4e-56  Score=443.66  Aligned_cols=322  Identities=55%  Similarity=0.905  Sum_probs=275.7

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      +++|||||+++|||++.+++.+.+.++.+|+.+|+++||+|+|+++++||.|++|+..+... ++++++.++..+|++.+
T Consensus        29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~-~~~~a~~~a~~lGl~~~  107 (418)
T 2iik_A           29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA-GAIMARIAQFLSDIPET  107 (418)
T ss_dssp             TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG-GHHHHHHHHHHTTCCTT
T ss_pred             CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc-cccHHHHHHHHcCCCCC
Confidence            36799999999999985446778899999999999999999999999999999998765432 45788888899999657


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhC
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFG  207 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G  207 (374)
                      +|+++++++|+||+.+|..|++.|++|++|++||+|+|+++..|+.........+.......+++..|++.+++++++||
T Consensus       108 ~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~g  187 (418)
T 2iik_A          108 VPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFG  187 (418)
T ss_dssp             SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTT
T ss_pred             ceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999877543221111121111111233568999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCcccc
Q 017289          208 VTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTA  287 (374)
Q Consensus       208 ~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~  287 (374)
                      +|||++++|++++|+||..|+..|+|++||+|+++...+|+ +.++..+++.|+.+|+++|+|+|+++||+|++++|+|+
T Consensus       188 itre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~-~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~  266 (418)
T 2iik_A          188 ISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTA  266 (418)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTT-SCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCS
T ss_pred             CCHHHHHHHHHHHHHHHHhChhcCccccceeeeeecccccc-CcccceeeecccCcCCCCCHHHHhhCCCcccCCCceee
Confidence            99999999999999999999999999999999976533332 22234578899999999999999999999988889999


Q ss_pred             CCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHH
Q 017289          288 GNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPII  367 (374)
Q Consensus       288 ~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~  367 (374)
                      +|||+++|||++|||+|+++|+++|.+|+++|.|++..+.+|..++.++..++++||++|||+++|||++|+||+|+++.
T Consensus       267 ~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~  346 (418)
T 2iik_A          267 GNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQA  346 (418)
T ss_dssp             TTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHH
T ss_pred             ccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccCCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHH
Confidence            99999999999999999999999999999999999988878877777888999999999999999999999999999999


Q ss_pred             HHhh
Q 017289          368 AANI  371 (374)
Q Consensus       368 l~~~  371 (374)
                      ++++
T Consensus       347 ~~~~  350 (418)
T 2iik_A          347 AYCV  350 (418)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8865

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=100.00  E-value=6.3e-56  Score=438.29  Aligned_cols=316  Identities=38%  Similarity=0.564  Sum_probs=274.3

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      +++|+|||+++|||+| +.|.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... +.++++.++..+|++..
T Consensus         5 ~~~v~Ivg~~~tp~g~-~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~-~~~~a~~ia~~lgl~~~   82 (397)
T 1wl4_A            5 SDPVVIVSAARTIIGS-FNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGC-GQNPVRQASVGAGIPYS   82 (397)
T ss_dssp             CSCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred             CCcEEEEEcccCCcee-CCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CCHHHHHHHHHcCCCCC
Confidence            3579999999999998 467788999999999999999999999999999999998776543 56789999999999657


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccccc----CcC-Chh-hhhh-ccc-ccC--CCchHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVV----GQV-NPK-VEIF-TQA-RDC--LLPMGI  197 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~----~~~-~~~-~~~~-~~~-~~~--~~~~~~  197 (374)
                      +|+++++++|+||+.+|..|++.|++|++|++|++|+|+|+..|+...    ... +.. +... ..+ ..+  ...|++
T Consensus        83 ~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~  162 (397)
T 1wl4_A           83 VPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGI  162 (397)
T ss_dssp             SCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHH
T ss_pred             ccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHH
Confidence            999999999999999999999999999999999999999998765321    100 001 1100 001 111  256999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      .+++|+++||+|||++++|++++|+||.+|+..|+|++||+|++++.++      ...+++.|+.+|+++|+|+|+++||
T Consensus       163 ~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~------~~~~~~~d~~~r~~~t~e~~~~~rp  236 (397)
T 1wl4_A          163 TAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRK------GLIEVKTDEFPRHGSNIEAMSKLKP  236 (397)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETT------EEEEECSCSCCCTTCCHHHHHTSCC
T ss_pred             HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCC------CceeeccccccCCCCCHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999876321      1246788999999999999999999


Q ss_pred             cccCC--CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 017289          278 AFKKD--GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN  355 (374)
Q Consensus       278 i~~~~--~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID  355 (374)
                      +|+++  |++|++|||+++|||++|||+|++.|+++|.+|+++|.|++..+.+|..++.++..++++||+++||+++|||
T Consensus       237 vfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId  316 (397)
T 1wl4_A          237 YFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVD  316 (397)
T ss_dssp             SSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCC
T ss_pred             ccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhhccchHHHHHHHHHHHcCCCHHHCC
Confidence            99874  8999999999999999999999999999999999999999998888877778899999999999999999999


Q ss_pred             EEEecCcchhHHHHhh
Q 017289          356 LFEINEVLVPIIAANI  371 (374)
Q Consensus       356 ~~ei~d~Fa~~~l~~~  371 (374)
                      ++|+||+|+++++++.
T Consensus       317 ~ie~~d~f~~~~l~~~  332 (397)
T 1wl4_A          317 IFEINEAFAAVSAAIV  332 (397)
T ss_dssp             EEEECCSBHHHHHHHH
T ss_pred             EEEEecccHHHHHHHH
Confidence            9999999999887654

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=100.00  E-value=6e-56  Score=437.80  Aligned_cols=315  Identities=39%  Similarity=0.555  Sum_probs=274.4

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| +.|.+++.++.+|+.+++++||+|+|+++++||.+++|+..+... +.++++.++..+|++..+
T Consensus         3 ~~v~Ivg~~~t~~g~-~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~ia~~lgl~~~~   80 (392)
T 2vu1_A            3 PSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQEA   80 (392)
T ss_dssp             CCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTTS
T ss_pred             CCEEEEEeeecCccc-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CcHHHHHHHHHcCCCCCc
Confidence            579999999999998 467788999999999999999999999999999999998876543 568899999999996448


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCccc----ccCc------CChhhhhhcccccCCCchHHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSIS----VVGQ------VNPKVEIFTQARDCLLPMGIT  198 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~  198 (374)
                      |+++++++|+||+.+|..|++.|++|++|++|++|+|+|+..|+.    ++..      ++..+........+...|++.
T Consensus        81 p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (392)
T 2vu1_A           81 TAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTT  160 (392)
T ss_dssp             EEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHH
T ss_pred             eEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHH
Confidence            999999999999999999999999999999999999999887652    1111      011111111111123469999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCc
Q 017289          199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA  278 (374)
Q Consensus       199 a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi  278 (374)
                      +++|+++||+|+|++++|++++|++|.+|+.+|+|++||+|++++.  ++ +   ...++.|+.+|+++|+|+|+++|||
T Consensus       161 a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~--~~-~---~~~f~~d~~~r~~~t~e~~~~~~~v  234 (392)
T 2vu1_A          161 AENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKG--RK-G---DITVDADEYIRHGATLDSMAKLRPA  234 (392)
T ss_dssp             HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECC--TT-C---CEEECSCSSCCTTCCHHHHHTCCCS
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeecc--CC-C---ceeeccccccCCCCCHHHHhcCCCc
Confidence            9999999999999999999999999999999999999999997642  11 1   1258999999999999999999999


Q ss_pred             ccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       279 ~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                      |+++|++|++|||+++|||++|||+++++|+++|.+|+++|.|++..+.+|..++.++..++++||+++|++++|||++|
T Consensus       235 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dId~ie  314 (392)
T 2vu1_A          235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVE  314 (392)
T ss_dssp             SCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred             cCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhhcchhHHHHHHHHHHHcCCCHHHcCEEE
Confidence            98889999999999999999999999999999999999999999998888877778899999999999999999999999


Q ss_pred             ecCcchhHHHHhh
Q 017289          359 INEVLVPIIAANI  371 (374)
Q Consensus       359 i~d~Fa~~~l~~~  371 (374)
                      +||+|+++.+++.
T Consensus       315 ~~d~f~~~~l~~~  327 (392)
T 2vu1_A          315 ANEAFAAQACAVN  327 (392)
T ss_dssp             ECCSBHHHHHHHH
T ss_pred             eccccHHHHHHHH
Confidence            9999999997654

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=100.00  E-value=7.9e-56  Score=436.61  Aligned_cols=317  Identities=38%  Similarity=0.550  Sum_probs=274.7

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHc-CCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT-RLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dA-Gl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      +++|+|||+++|||+|.++|.+++.++.+|+.+++++||+|+ |+++++||.+++|+..+....+.++++.++..+|++.
T Consensus         4 m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~   83 (390)
T 1wdk_C            4 PRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPH   83 (390)
T ss_dssp             TTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCT
T ss_pred             CCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCC
Confidence            368999999999999832577889999999999999999999 9999999999999877654334678999999999966


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHh
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF  206 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  206 (374)
                      .+|+++++++|+||+.+|.+|++.|++|++|++|++|+|.++..|.......++.+...  +......|++.+++|+++|
T Consensus        84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~--~~~~~~~~g~~a~~~~~~~  161 (390)
T 1wdk_C           84 TSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLY--AAKASGMMGLTAEMLGKMH  161 (390)
T ss_dssp             TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGT--SCGGGGSHHHHHHHHHHHH
T ss_pred             CccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCcccccc--CCcchhHHHHHHHHHHHHh
Confidence            79999999999999999999999999999999999999999876653211001122111  1122235899999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-CCcc
Q 017289          207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGTT  285 (374)
Q Consensus       207 G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-~~~l  285 (374)
                      |+|+|++++|++++|++|..|+++|+|.+||+|++++.++   .  +...++.|+.+|+++|+|+|+++||+|++ +|++
T Consensus       162 g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~---~--~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~v  236 (390)
T 1wdk_C          162 GISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDEN---G--FLKIFDYDETIRPDTTLESLAALKPAFNPKGGTV  236 (390)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTT---C--CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCC---C--cceeeccccccCCCCCHHHHhcCCCcccCCCCcE
Confidence            9999999999999999999999999999999998753211   0  11258999999999999999999999987 8889


Q ss_pred             ccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       286 t~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      |++|||+++|||++|||+|++.|+++|.+|+++|.|++..+++|..++.++..++++||+++|++++|||++|+||+|++
T Consensus       237 t~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~  316 (390)
T 1wdk_C          237 TAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAA  316 (390)
T ss_dssp             CGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHH
T ss_pred             echhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHH
Confidence            99999999999999999999999999999999999999988888777788999999999999999999999999999999


Q ss_pred             HHHHhh
Q 017289          366 IIAANI  371 (374)
Q Consensus       366 ~~l~~~  371 (374)
                      ++++++
T Consensus       317 ~~~~~~  322 (390)
T 1wdk_C          317 QALPVL  322 (390)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888765

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=100.00  E-value=2e-55  Score=434.55  Aligned_cols=316  Identities=41%  Similarity=0.544  Sum_probs=277.1

Q ss_pred             CceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC
Q 017289           49 DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV  128 (374)
Q Consensus        49 ~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~  128 (374)
                      ++|+|||+++|||+| +++.+++.++.+|+.+|+++||+|+|+++++||.+++|+..+... ++++++.++..+|++..+
T Consensus         5 ~~v~Ivg~~rT~~g~-~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~-~~~~a~~~~~~lGl~~~~   82 (395)
T 4e1l_A            5 KDVVIVSAVRTPIGS-FGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL-GQNVARQIAINAGIPNSV   82 (395)
T ss_dssp             CCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSST-TCCHHHHHHHHTTCCTTS
T ss_pred             CeEEEEECccCCccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-cchHHHHHHHHcCCCCCc
Confidence            589999999999998 457788999999999999999999999999999999998876553 578999999999997679


Q ss_pred             CceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccc-----cCcC-Chhhh-----hhcccccCCCchHH
Q 017289          129 PLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISV-----VGQV-NPKVE-----IFTQARDCLLPMGI  197 (374)
Q Consensus       129 p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~-----~~~~-~~~~~-----~~~~~~~~~~~~~~  197 (374)
                      |+++++++|+|++.+|..|+++|++|++|++||+|+|++++.|+..     +... +..+.     +..........|++
T Consensus        83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  162 (395)
T 4e1l_A           83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGI  162 (395)
T ss_dssp             CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHH
T ss_pred             eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHH
Confidence            9999999999999999999999999999999999999999876532     1000 01111     00111112246899


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      .+++|+++||+|+|++++|++++|++|.+++.+|+|++||+|++++.++     .++.++++|+.+|+++|+|+|.++||
T Consensus       163 ~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~-----g~~~~~~~d~~~r~~~t~e~l~~~~~  237 (395)
T 4e1l_A          163 TAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRR-----GKIETIDKDEYPKLGMTFEGLSKLKP  237 (395)
T ss_dssp             HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEET-----TEEEEECSCSCCCTTCCHHHHHHCCB
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCC-----CcceEECCccccCCCCCHHHHhhCCC
Confidence            9999999999999999999999999999999999999999999876422     12346889999999999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                      +|+++||+|++|||+++||++++||++++.|+++|.+|+++|.|++...++|..++.++..+++++|+++|++++|||++
T Consensus       238 v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~v  317 (395)
T 4e1l_A          238 AFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEVMGTGPIPATRKALKKAGLSINDIDLI  317 (395)
T ss_dssp             SSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGGTTCTHHHHHHHHHHHTTCCGGGCSEE
T ss_pred             ccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCcchHHHHHHHHHHHHHcCCCHHHcCEE
Confidence            99999999999999999999999999999999999999999999999888888888889999999999999999999999


Q ss_pred             EecCcchhHHHHhh
Q 017289          358 EINEVLVPIIAANI  371 (374)
Q Consensus       358 ei~d~Fa~~~l~~~  371 (374)
                      |+||+|+++.+++.
T Consensus       318 e~~d~fa~~~~~~~  331 (395)
T 4e1l_A          318 EANEAFAAQALAVK  331 (395)
T ss_dssp             EECCSBHHHHHHHH
T ss_pred             EecChhHHHHHHHH
Confidence            99999999988765

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=100.00  E-value=1.8e-55  Score=435.80  Aligned_cols=313  Identities=32%  Similarity=0.501  Sum_probs=255.4

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP  125 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~  125 (374)
                      |+++|+|||+++|||+|.++|.+++.++.+|+.+|+++||+| +|+++++||.+++|+..+....++++++.++..+|+|
T Consensus         5 m~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp   84 (407)
T 3svk_A            5 MSEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLP   84 (407)
T ss_dssp             --CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCC
T ss_pred             CCCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCC
Confidence            456899999999999975678899999999999999999999 9999999999999988765433568899999999997


Q ss_pred             CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc---CChhhhhhcccccCCCchHHHHHHH
Q 017289          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ---VNPKVEIFTQARDCLLPMGITSENV  202 (374)
Q Consensus       126 ~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~  202 (374)
                      ..+|+++|+++|+|++.+|..|+++|++|++|+|||+|+|+|++.|+.....   .++.+.    .......|++.++++
T Consensus        85 ~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~----~~~~~~~~g~~Ae~~  160 (407)
T 3svk_A           85 ETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETN----YRIGFVPQGIGADLI  160 (407)
T ss_dssp             TTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTC----CCCCCHHHHHHHHHH
T ss_pred             CCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhh----ccccccCHHHHHHHH
Confidence            6899999999999999999999999999999999999999999877643211   111111    112234789999999


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD  282 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~  282 (374)
                      +++||++||++++|++++|++|..+.++|+|++||+|++    ||+.    ..++++|+.+|+++|+|+|+++||+|++.
T Consensus       161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~----~~~g----~~~~~pd~~~r~~~t~e~l~~~~~vf~~~  232 (407)
T 3svk_A          161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVR----DQNG----LVILDHDEHMRPDTTMEGLAKLKTAFDGV  232 (407)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEE----CTTS----CEEECSCTTCCTTCCHHHHHTSCBSCC--
T ss_pred             HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeee----cCCC----ceeeCCccccCCCCCHHHHhhCCCeecCC
Confidence            999999999999999999999999999999999999996    3332    23578899999999999999999999765


Q ss_pred             Cc---------------------cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHH
Q 017289          283 GT---------------------TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIP  341 (374)
Q Consensus       283 ~~---------------------lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~  341 (374)
                      +.                     +|++|||+++|||+++||+|++.|+++|.+|+++|.|++..+.+|..+..++..+++
T Consensus       233 g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~~~~~~~~a~~  312 (407)
T 3svk_A          233 GEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPVIMLTGPTPATR  312 (407)
T ss_dssp             -----------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC------CCCTHHHHHH
T ss_pred             CccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCccccHHHHHHHH
Confidence            44                     499999999999999999999999999999999999999988888888889999999


Q ss_pred             HHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          342 AAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       342 ~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      ++|+++||+++|||++|+||+|++++++++
T Consensus       313 ~al~~Agl~~~dId~~e~hdaf~~~~l~~~  342 (407)
T 3svk_A          313 KVLDRAGLTIDDIDLFELNEAFASVVLKFQ  342 (407)
T ss_dssp             HHHHHHTCCGGGCSEEEECCSBHHHHHHHH
T ss_pred             HHHHHcCCCHHHCCEEEEeChhHHHHHHHH
Confidence            999999999999999999999999988764

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=100.00  E-value=1.2e-52  Score=414.64  Aligned_cols=316  Identities=31%  Similarity=0.449  Sum_probs=272.3

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPE  126 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~  126 (374)
                      ++++|+|||+++|||+| +.+.+.+.++.+|+.+++++||+|+|+++++||.+++|+..+... +.++++.++..+|++.
T Consensus         6 ~~~~v~Ivg~~rTp~g~-~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~-~~~~a~~va~~lgl~~   83 (395)
T 2ib8_A            6 TLKEVVIVSATRTPIGS-FLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE-GQAPTRQAVLGAGLPI   83 (395)
T ss_dssp             BCCCEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCT
T ss_pred             CCCCeEEEecccccccc-cCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CchHHHHHHHHcCCCC
Confidence            34689999999999998 457778899999999999999999999999999999998876543 5688999999999965


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcC---C------hh-hhhhcccccCCCchH
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV---N------PK-VEIFTQARDCLLPMG  196 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~---~------~~-~~~~~~~~~~~~~~~  196 (374)
                      .+|+++++++|+||+.+|..|++.|++|++|++||+|+|.++..|.......   .      .. +.. .........|+
T Consensus        84 ~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~m~  162 (395)
T 2ib8_A           84 STPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDG-LTDVYNKIHMG  162 (395)
T ss_dssp             TCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHT-TEETTTTEEHH
T ss_pred             CceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccc-cccccccchHH
Confidence            7899999999999999999999999999999999999999988665211100   0      00 111 11112235699


Q ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCC
Q 017289          197 ITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLK  276 (374)
Q Consensus       197 ~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~  276 (374)
                      +.+++|+++||+|+|+++++++++|+||.+|+.+++|++||+|+++...     .+.+.+++.||.+| +++.|.+.++|
T Consensus       163 ~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~-----~~p~~~~~~D~~~r-~~~~~~l~~l~  236 (395)
T 2ib8_A          163 SCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVK-----GQPDVVVKEDEEYK-RVDFSKVPKLK  236 (395)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCT-----TSCCEEECSCSGGG-SCCTTTGGGSC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeeccc-----CCcceeeccccccc-cCCHHHHhcCC
Confidence            9999999999999999999999999999999999999999999987531     11124688999999 48999999999


Q ss_pred             CcccC-CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 017289          277 PAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDIN  355 (374)
Q Consensus       277 pi~~~-~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID  355 (374)
                      |+|.+ +|++|++|||+++|||++|||+|++.|+++|.+|+++|+|++....+|..++.++..++++||+++|++++|||
T Consensus       237 ~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~a~~~al~~Agl~~~dId  316 (395)
T 2ib8_A          237 TVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPIDFPIAPVYAASMVLKDVGLKKEDIA  316 (395)
T ss_dssp             CTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGEE
T ss_pred             ccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhhccccHHHHHHHHHHHcCCCHHHcC
Confidence            99954 79999999999999999999999999999999999999999987778877777788999999999999999999


Q ss_pred             EEEecCcchhHHHHhh
Q 017289          356 LFEINEVLVPIIAANI  371 (374)
Q Consensus       356 ~~ei~d~Fa~~~l~~~  371 (374)
                      ++|+||+|+++++.++
T Consensus       317 ~ie~~D~f~~~~l~~~  332 (395)
T 2ib8_A          317 MWEVNEAFSLVVLANI  332 (395)
T ss_dssp             EEEECCSBHHHHHHHH
T ss_pred             EEEEccccHHHHHHHH
Confidence            9999999999998875

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.5e-48  Score=392.45  Aligned_cols=302  Identities=14%  Similarity=0.097  Sum_probs=211.8

Q ss_pred             ccccCCCCC--CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCC-------
Q 017289           38 AAGYHRKPA--FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG-------  108 (374)
Q Consensus        38 ~~~~~~m~~--~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~-------  108 (374)
                      |--.|-|..  ++++++|||+|+||+.+ ..|.++++++.||+.+|+++||+|+||++++||.+|.|+.....       
T Consensus         5 ~~~~~~ma~mvdPRtPVIVGvG~t~~r~-~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~   83 (520)
T 4egv_A            5 HHHHHHMASMVDPRTPVIVGVGQFTERI-DLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPA   83 (520)
T ss_dssp             ----------CCTTCEEEEEEEEEEC---------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC-------
T ss_pred             ccchhhhhccCCCCCeEEEEeeeccccC-CCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchh
Confidence            333444544  46789999999999865 34678899999999999999999999999998887766543211       


Q ss_pred             ----CCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhh-
Q 017289          109 ----STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVE-  183 (374)
Q Consensus       109 ----~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~-  183 (374)
                          ....++++.++..+|++ ..+.++++.+|+||+++|..|+++|++|++|+||++|+|+|++.|+.......+.+. 
T Consensus        84 ~~~~g~~~~~~~~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~  162 (520)
T 4egv_A           84 SAPLGVSSNYPRSVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSE  162 (520)
T ss_dssp             -------CCHHHHHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------
T ss_pred             hhhhccccCHHHHHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccc
Confidence                12356889999999997 688899999999999999999999999999999999999999987642211100000 


Q ss_pred             -------hhc-----------cccc---CCCchHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHhCCCCCCcce
Q 017289          184 -------IFT-----------QARD---CLLPMGITSENVAQRFGVTRQ----EQDLAAVESHRRAAAATASGKFKDEII  238 (374)
Q Consensus       184 -------~~~-----------~~~~---~~~~~~~~a~~~~~~~G~t~e----~~~~vav~s~~~a~~~~~~g~~~~ei~  238 (374)
                             ...           ..+.   ....+++.+..++++||++++    ++..+++++++++..            
T Consensus       163 ~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~------------  230 (520)
T 4egv_A          163 TVDGQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAK------------  230 (520)
T ss_dssp             ------------------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred             cccccccccccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccccccc------------
Confidence                   000           0000   001234455556666666644    345556666666554            


Q ss_pred             eeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCce
Q 017289          239 PVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPIL  316 (374)
Q Consensus       239 p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~  316 (374)
                             ||+++++            +++|+|++++++|.+.+  ++.+|++|||+++|||+|+||+|+++|+++|++|+
T Consensus       231 -------np~a~~r------------~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~  291 (520)
T 4egv_A          231 -------NPYSSAP------------TERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEE  291 (520)
T ss_dssp             -------CTTSSSC------------CCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGG
T ss_pred             -------Ccccccc------------CCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCc
Confidence                   7776654            45899999988776643  45668999999999999999999999999999999


Q ss_pred             EEEEEEEEeccCCCCC--------CCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhhh
Q 017289          317 GVFRSFSAVGVDPSVM--------GIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIM  372 (374)
Q Consensus       317 a~i~g~~~~~~~p~~~--------~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~~  372 (374)
                      ++|.+++....+|..+        ..++..+++++|+++||+++|||++|+||||++++++++.
T Consensus       292 a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~  355 (520)
T 4egv_A          292 KWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICD  355 (520)
T ss_dssp             GCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHH
T ss_pred             eEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHH
Confidence            8998888776554332        2245789999999999999999999999999999998763

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=99.93  E-value=9.8e-25  Score=216.42  Aligned_cols=201  Identities=20%  Similarity=0.309  Sum_probs=150.6

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC------------------C-------cccHHHHHHHHcCCC
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------T-------RAMECRMAAFYAGFP  125 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~------------------~-------~~~~a~~va~~~Gl~  125 (374)
                      .+|+.+++++||+|||+++++||    +|++|+..+...                  .       ...++..++..+|+ 
T Consensus        78 ~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl-  156 (416)
T 1e5m_A           78 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA-  156 (416)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC-
Confidence            37999999999999999999999    799997654310                  0       12468889999999 


Q ss_pred             CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHH
Q 017289          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR  205 (374)
Q Consensus       126 ~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  205 (374)
                       .+|+++++++|+||+.||..|++.|++|++|++||+|+|.+.+ +..                    ..++      .+
T Consensus       157 -~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~-~~~--------------------~~~~------~~  208 (416)
T 1e5m_A          157 -KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAIT-PLS--------------------YAGF------AS  208 (416)
T ss_dssp             -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH--------------------HHHH------HH
T ss_pred             -CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHH--------------------HHHH------HH
Confidence             4799999999999999999999999999999999999998532 100                    0000      00


Q ss_pred             hCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCcc
Q 017289          206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTT  285 (374)
Q Consensus       206 ~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~l  285 (374)
                      .|                        .+..+       ..||.            +.+            +| |+.    
T Consensus       209 ~~------------------------~ls~~-------~~~p~------------~~~------------rp-fd~----  228 (416)
T 1e5m_A          209 AR------------------------ALSFR-------NDDPL------------HAS------------RP-FDK----  228 (416)
T ss_dssp             TT------------------------CBCCC-------TTCGG------------GTC------------CT-TBT----
T ss_pred             cC------------------------CccCC-------CCCCc------------ccc------------cc-Ccc----
Confidence            01                        00000       00121            112            22 321    


Q ss_pred             ccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       286 t~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                       ..+++.++|||+++||++++.|++.|.+++++|.|++...+.     |...+.+...++++||+++||+++|||++|+|
T Consensus       229 -~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~H  307 (416)
T 1e5m_A          229 -DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAH  307 (416)
T ss_dssp             -TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred             -CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEE
Confidence             135666999999999999999999999999999999987543     33334456799999999999999999999999


Q ss_pred             Ccchh
Q 017289          361 EVLVP  365 (374)
Q Consensus       361 d~Fa~  365 (374)
                      ..++.
T Consensus       308 gtgt~  312 (416)
T 1e5m_A          308 GTSTP  312 (416)
T ss_dssp             CCSCH
T ss_pred             CCCCc
Confidence            98876

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=99.92  E-value=1.4e-24  Score=216.11  Aligned_cols=203  Identities=20%  Similarity=0.284  Sum_probs=149.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCccc-cC----eEEEEeecCCC-------------------------CCcccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSE-VG----DIVVGTVLAPG-------------------------STRAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~-ID----~vi~g~~~~~~-------------------------~~~~~~a~~va~~~G  123 (374)
                      ..+|+.+|+++||+|||+++++ +|    ++++|+..+..                         ......+..++..+|
T Consensus        87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  166 (428)
T 3kzu_A           87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHK  166 (428)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcC
Confidence            5679999999999999999988 88    67887653210                         012235778999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +  .+|+++++++|+|++.||..|+++|++|++|++||+|+|.+.+ +..                    ..++.+.   
T Consensus       167 l--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~--------------------~~~~~~~---  220 (428)
T 3kzu_A          167 L--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVS-RIS--------------------LAGFAAC---  220 (428)
T ss_dssp             C--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH--------------------HHHHHHT---
T ss_pred             C--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCC-HHH--------------------HHHHHHc---
Confidence            9  4799999999999999999999999999999999999998543 100                    0000000   


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                                                 +.+...                        .      ..+.-...+| |+.  
T Consensus       221 ---------------------------~~ls~~------------------------~------~~~~~~~~~p-fd~--  240 (428)
T 3kzu_A          221 ---------------------------KALSTE------------------------R------NDDPTAASRP-YDE--  240 (428)
T ss_dssp             ---------------------------TCBCCS------------------------C------TTSGGGTCCT-TBT--
T ss_pred             ---------------------------cccccC------------------------c------cCCcccccCC-ccc--
Confidence                                       000000                        0      0000011223 321  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                         ..++..++|||++|||++++.|+++|.+++++|.|++...+     .|...+.+...++++||++|||+++|||++|
T Consensus       241 ---~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve  317 (428)
T 3kzu_A          241 ---DRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYIN  317 (428)
T ss_dssp             ---TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ---CCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEE
Confidence               13566699999999999999999999999999999998753     3444445678999999999999999999999


Q ss_pred             ecCcchh
Q 017289          359 INEVLVP  365 (374)
Q Consensus       359 i~d~Fa~  365 (374)
                      +|++|+.
T Consensus       318 ~HgtgT~  324 (428)
T 3kzu_A          318 AHGTSTM  324 (428)
T ss_dssp             CCCCSST
T ss_pred             ecCCcch
Confidence            9999983

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.91  E-value=4.9e-24  Score=210.85  Aligned_cols=204  Identities=21%  Similarity=0.310  Sum_probs=149.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~----vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      +..+|+.+|+++||+|+|+++++||.    +++|+..+...                         ....++..++..+|
T Consensus        70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  149 (408)
T 1j3n_A           70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG  149 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence            35789999999999999999999994    66665433210                         01135788999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      ++  +|+++++++|+|++.||..|++.|++|++|++||+|+|.+.+ |..                    ..++...+++
T Consensus       150 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~--------------------~~~~~~~~~l  206 (408)
T 1j3n_A          150 FT--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMA--------------------IGAFAVMRAL  206 (408)
T ss_dssp             CC--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH--------------------HHHHHHTTCB
T ss_pred             CC--CceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHH--------------------HHHHHhcccc
Confidence            94  699999999999999999999999999999999999998543 110                    0010000000


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      .+++.+++                                                             ...+| |+.  
T Consensus       207 s~~~~~p~-------------------------------------------------------------~~~~p-fd~--  222 (408)
T 1j3n_A          207 STRNEEPE-------------------------------------------------------------KASRP-FTL--  222 (408)
T ss_dssp             CCCTTCHH-------------------------------------------------------------HHCCT-TBT--
T ss_pred             cCCCCCCC-------------------------------------------------------------cCccc-CcC--
Confidence            00111100                                                             01122 221  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                         ..++..++|||+++||++++.|++.|.+++++|.|++...+     .|...+.+...++++||+++|++++|||++|
T Consensus       223 ---~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve  299 (408)
T 1j3n_A          223 ---SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYIN  299 (408)
T ss_dssp             ---TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ---CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence               12555699999999999999999999999999999987653     2333444567999999999999999999999


Q ss_pred             ecCcchhH
Q 017289          359 INEVLVPI  366 (374)
Q Consensus       359 i~d~Fa~~  366 (374)
                      +|++|+..
T Consensus       300 ~Hgtgt~~  307 (408)
T 1j3n_A          300 AHGTSTPV  307 (408)
T ss_dssp             CCCCSCHH
T ss_pred             EeCCcCcc
Confidence            99999874

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=99.90  E-value=5.6e-23  Score=205.01  Aligned_cols=202  Identities=17%  Similarity=0.272  Sum_probs=152.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ..+|+.+++++||+|||+++++||    +|++|+..+...                         ....++..++..+|+
T Consensus        98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl  177 (437)
T 2gqd_A           98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA  177 (437)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence            467999999999999999999999    999997654310                         012467889999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                      .  +|+++++++|+|++.||..|++.|++|++|++||+|+|.+.+ |..                    ..++      .
T Consensus       178 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~--------------------~~~~------~  228 (437)
T 2gqd_A          178 K--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMA--------------------IAGF------S  228 (437)
T ss_dssp             C--SSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH--------------------HHHH------H
T ss_pred             C--CceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHH--------------------HHHH------H
Confidence            4  699999999999999999999999999999999999998644 110                    0000      0


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      ..+                        .+..        ..+|..            .            .+| |+.   
T Consensus       229 ~~~------------------------~ls~--------~~~p~~------------~------------~~p-fd~---  248 (437)
T 2gqd_A          229 ASR------------------------ALST--------NDDIET------------A------------CRP-FQE---  248 (437)
T ss_dssp             HTT------------------------CBCC--------CCCTTT------------S------------SCT-TCT---
T ss_pred             hcc------------------------CccC--------CCCCcc------------c------------cCC-CCC---
Confidence            000                        0000        001211            1            123 422   


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCC-----CCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-----SVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p-----~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                        ..+++.++|||++|||++++.|++.|.+++++|.|++...+..     ...+.+...++++||+++||+++|||++|+
T Consensus       249 --~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~  326 (437)
T 2gqd_A          249 --GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNA  326 (437)
T ss_dssp             --TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred             --CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEE
Confidence              2356669999999999999999999999999999999875432     222334578999999999999999999999


Q ss_pred             cCcchhH
Q 017289          360 NEVLVPI  366 (374)
Q Consensus       360 ~d~Fa~~  366 (374)
                      |++++..
T Consensus       327 HgtgT~~  333 (437)
T 2gqd_A          327 HGTSTPV  333 (437)
T ss_dssp             CCCSCHH
T ss_pred             ECCCCcC
Confidence            9999874

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=99.90  E-value=6.7e-23  Score=203.02  Aligned_cols=201  Identities=20%  Similarity=0.280  Sum_probs=149.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ..+|+.+|+++||+|||+++++||    +|++|+..+...                         ....++..++..+|+
T Consensus        74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl  153 (413)
T 3o04_A           74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA  153 (413)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence            456999999999999999999999    999997642100                         011247789999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                      .  +|+++++++|+|++.||..|++.|++|++|++||+|+|.+.+...                     ..++      .
T Consensus       154 ~--gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~---------------------~~~~------~  204 (413)
T 3o04_A          154 K--GINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMS---------------------LAGF------T  204 (413)
T ss_dssp             C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHH---------------------HHHH------H
T ss_pred             C--CcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHH---------------------HHHH------H
Confidence            4  699999999999999999999999999999999999998654100                     0000      0


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      ..+                        .+...        .+|.            ..+            +| |+.   
T Consensus       205 ~~~------------------------~ls~~--------~~p~------------~~~------------~p-fd~---  224 (413)
T 3o04_A          205 ANK------------------------ALSLN--------PDPE------------TAC------------RP-FDK---  224 (413)
T ss_dssp             HTT------------------------CBCCC--------CCTT------------TSC------------CT-TBT---
T ss_pred             hcc------------------------cccCC--------CCCC------------CCc------------CC-CcC---
Confidence            000                        01000        0111            111            22 321   


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                        ..++..++|||++|||++++.|++.|.+++++|.|++...+     .|.....+...++++||+++|++++|||++|+
T Consensus       225 --~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~  302 (413)
T 3o04_A          225 --DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINA  302 (413)
T ss_dssp             --TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred             --CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence              12455599999999999999999999999999999998653     23333345679999999999999999999999


Q ss_pred             cCcchh
Q 017289          360 NEVLVP  365 (374)
Q Consensus       360 ~d~Fa~  365 (374)
                      |.+++.
T Consensus       303 HgtgT~  308 (413)
T 3o04_A          303 HGTSTP  308 (413)
T ss_dssp             CCCCCH
T ss_pred             eCCcCc
Confidence            999876

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=99.90  E-value=5.1e-23  Score=206.08  Aligned_cols=203  Identities=17%  Similarity=0.261  Sum_probs=149.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCcccc-C----eEEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEV-G----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~I-D----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      ..+|+.+|+++||+|||+++++| |    ++++|+..+...                         ....++..++..+|
T Consensus       102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  181 (451)
T 4ddo_A          102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR  181 (451)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence            46799999999999999999999 8    688887532100                         01235678999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +  .+|+++++++|+||+.||..|+++|++|++|++||+|+|.++. +..                     +....    
T Consensus       182 l--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~-~~~---------------------~~~~~----  233 (451)
T 4ddo_A          182 F--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-KVS---------------------LGGFA----  233 (451)
T ss_dssp             C--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHH---------------------HHHHH----
T ss_pred             C--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccC-HHH---------------------HHHHH----
Confidence            9  4699999999999999999999999999999999999998654 100                     00000    


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                                          ...     .+.            +.                  .+.+.....+| |+.  
T Consensus       234 --------------------~~~-----~ls------------~~------------------~~~~~~~~~~p-fd~--  255 (451)
T 4ddo_A          234 --------------------AAR-----ALS------------TG------------------FSEEPVRASRP-FDR--  255 (451)
T ss_dssp             --------------------HTT-----CBC------------CS------------------CTTSGGGSCCT-TBT--
T ss_pred             --------------------HHh-----hhc------------cC------------------CCcCccccccc-ccc--
Confidence                                000     000            00                  00001111233 321  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCC------CCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVM------GIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~------~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                         ..+++.++|||++|||++++.|+++|.+|+++|.|++... ++...      ..+...++++||++|||+++|||++
T Consensus       256 ---~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~v  331 (451)
T 4ddo_A          256 ---DRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTA-DAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYV  331 (451)
T ss_dssp             ---TCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEE-CCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred             ---CCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEec-CCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence               1356669999999999999999999999999999999875 43322      2234799999999999999999999


Q ss_pred             EecCcchhH
Q 017289          358 EINEVLVPI  366 (374)
Q Consensus       358 ei~d~Fa~~  366 (374)
                      |+|++++..
T Consensus       332 e~Hgtgt~~  340 (451)
T 4ddo_A          332 NAHATSTPV  340 (451)
T ss_dssp             ECCCCSCHH
T ss_pred             EecCCcCcc
Confidence            999999864

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=99.90  E-value=1.4e-23  Score=207.76  Aligned_cols=201  Identities=13%  Similarity=0.155  Sum_probs=149.5

Q ss_pred             HHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRL-NPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl-~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      ..+|+.+|+++||+|||+ ++++||    ++++|+..+...                         ....++..++..+|
T Consensus        77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  156 (412)
T 4ewg_A           77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD  156 (412)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence            467999999999999999 788898    888887543200                         01246788999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +  .+|+++|+++|+||+.||..|++.|++|++|++||+|+|.++..+..                      +      .
T Consensus       157 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~----------------------~------~  206 (412)
T 4ewg_A          157 L--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVA----------------------V------F  206 (412)
T ss_dssp             C--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH----------------------H------H
T ss_pred             C--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHH----------------------H------H
Confidence            9  47999999999999999999999999999999999999986531110                      0      0


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      .+.+                        .+.            +..       .+++..+            +| |+.  
T Consensus       207 ~~~~------------------------~l~------------~~~-------~~p~~~~------------rp-fd~--  228 (412)
T 4ewg_A          207 DTLY------------------------ATS------------TRN-------DEPHLTP------------RP-FDA--  228 (412)
T ss_dssp             HTTT------------------------CBC------------CCT-------TCGGGCC------------CT-TBT--
T ss_pred             HHhh------------------------ccc------------cCC-------CCCCCCC------------CC-CCC--
Confidence            0000                        000            000       0111222            22 322  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC---CCCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~---~~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                         ..+++.++|||++|||++++.|++.|.+++++|.|++...+...   +...+...++++||++||++++|||++|+|
T Consensus       229 ---~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~H  305 (412)
T 4ewg_A          229 ---KRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQLALEDAKLDANAIAYVNAH  305 (412)
T ss_dssp             ---TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred             ---CCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEcc
Confidence               23556699999999999999999999999999999998754221   122355799999999999999999999999


Q ss_pred             Ccchh
Q 017289          361 EVLVP  365 (374)
Q Consensus       361 d~Fa~  365 (374)
                      ...+.
T Consensus       306 gtgt~  310 (412)
T 4ewg_A          306 GTSTD  310 (412)
T ss_dssp             CCCCH
T ss_pred             CCCCc
Confidence            98876

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=99.90  E-value=2.3e-23  Score=206.51  Aligned_cols=201  Identities=18%  Similarity=0.210  Sum_probs=148.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ..+|+.+++++||+|||+  +++|    +|++|+..+...                         .....+..++..+|+
T Consensus        83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl  160 (416)
T 2wge_A           83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA  160 (416)
T ss_dssp             HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence            357999999999999999  4565    488887654321                         001357788999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                        ++|+++++++|+||+.||..|++.|++|++|++||+|+|.++....                     ..++...+++.
T Consensus       161 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~---------------------~~~~~~~~~l~  217 (416)
T 2wge_A          161 --RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALP---------------------IAAFSMMRAMS  217 (416)
T ss_dssp             --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHH---------------------HHHHHTTTCBC
T ss_pred             --CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHH---------------------HHHHHhcchhh
Confidence              4799999999999999999999999999999999999998764100                     00000000000


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      +++.                                                 +.+..+            +| |+    
T Consensus       218 ~~~~-------------------------------------------------~~~~~~------------~p-fd----  231 (416)
T 2wge_A          218 TRND-------------------------------------------------EPERAS------------RP-FD----  231 (416)
T ss_dssp             CCTT-------------------------------------------------SGGGSC------------CT-TB----
T ss_pred             cccc-------------------------------------------------CCcccc------------cc-cc----
Confidence            0000                                                 011111            22 32    


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                       ...+++.++||++++||++++.|++.|.+++++|.|++...+     .|...+.+...+++++|+++|++++|||++|+
T Consensus       232 -~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~  310 (416)
T 2wge_A          232 -KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNA  310 (416)
T ss_dssp             -TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred             -cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence             124666799999999999999999999999999999987652     34334456789999999999999999999999


Q ss_pred             cCcchhH
Q 017289          360 NEVLVPI  366 (374)
Q Consensus       360 ~d~Fa~~  366 (374)
                      |++++..
T Consensus       311 HgtgT~~  317 (416)
T 2wge_A          311 HGTATPI  317 (416)
T ss_dssp             CCCCCHH
T ss_pred             CCCCCcC
Confidence            9998864

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=99.90  E-value=7.4e-23  Score=204.16  Aligned_cols=202  Identities=23%  Similarity=0.352  Sum_probs=151.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCc-cccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNP-SEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~-~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      ..+|+.+++++||+|||+++ +++|    +|++|+..+...                         ....++..++..+|
T Consensus        97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  176 (438)
T 2iwz_A           97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK  176 (438)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence            46799999999999999998 8888    689987654310                         01246888999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +.  +|+++++++|+|++.||..|++.|++|++|++||+|+|.+.+ |...                    .++      
T Consensus       177 l~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~--------------------~~~------  227 (438)
T 2iwz_A          177 LK--GPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLSL--------------------AGF------  227 (438)
T ss_dssp             CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH--------------------HHH------
T ss_pred             CC--CceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHHH--------------------HHH------
Confidence            94  699999999999999999999999999999999999998543 1100                    000      


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      .+.|                        .+...        .+|.            ..            .+| |+.  
T Consensus       228 ~~~~------------------------~ls~~--------~~p~------------~~------------~~p-fd~--  248 (438)
T 2iwz_A          228 SRAR------------------------ALSTN--------SDPK------------LA------------CRP-FHP--  248 (438)
T ss_dssp             HHTT------------------------CBCCC--------SCTT------------TS------------CCT-TCT--
T ss_pred             HhcC------------------------CcCCC--------CCCC------------cc------------ccc-CCC--
Confidence            0011                        01000        0221            11            123 432  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEE
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFE  358 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~e  358 (374)
                         ..+++.++|||++|||++++.|++.|.+++++|.|++...+.     |.....+...++++||+++|++++|||++|
T Consensus       249 ---~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve  325 (438)
T 2iwz_A          249 ---KRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYIN  325 (438)
T ss_dssp             ---TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ---CCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence               124456999999999999999999999999999999987543     333344567999999999999999999999


Q ss_pred             ecCcchhH
Q 017289          359 INEVLVPI  366 (374)
Q Consensus       359 i~d~Fa~~  366 (374)
                      +|++++..
T Consensus       326 ~HgtgT~~  333 (438)
T 2iwz_A          326 AHATSTPL  333 (438)
T ss_dssp             CCCCSCHH
T ss_pred             ecCCCCcc
Confidence            99999874

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=99.90  E-value=2.4e-23  Score=207.16  Aligned_cols=202  Identities=19%  Similarity=0.279  Sum_probs=148.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ...|+.+|+++||+|||+++++||    ++++|+..+...                         ....++..++..+|+
T Consensus        88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl  167 (427)
T 3ho9_A           88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL  167 (427)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence            467999999999999999999999    588886542200                         012357789999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHH
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQ  204 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  204 (374)
                        .+|+++++++|+||+.||..|+++|++|++|++||+|+|.++. |..+                    .++      .
T Consensus       168 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~--------------------~~~------~  218 (427)
T 3ho9_A          168 --RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PLGV--------------------GGF------G  218 (427)
T ss_dssp             --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH--------------------HHH------H
T ss_pred             --CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHH--------------------HHH------H
Confidence              4799999999999999999999999999999999999999864 1100                    000      0


Q ss_pred             HhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCc
Q 017289          205 RFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGT  284 (374)
Q Consensus       205 ~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~  284 (374)
                      +.+                        .+...         |.          +++.            ..+| |+.   
T Consensus       219 ~~~------------------------~ls~~---------~~----------~~~~------------~~~p-fd~---  239 (427)
T 3ho9_A          219 AAR------------------------ALSTR---------ND----------NPQA------------ASRP-WDK---  239 (427)
T ss_dssp             HTT------------------------CBCCC---------TT----------CHHH------------HCCT-TBT---
T ss_pred             hcc------------------------CcccC---------CC----------CCCc------------ccCC-ccC---
Confidence            000                        00000         00          0000            1122 221   


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                        ..++..++|||++|||++++.|+++|.+++++|.|++...+     .|.....+...++++||++|||+++|||++|+
T Consensus       240 --~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~  317 (427)
T 3ho9_A          240 --ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNA  317 (427)
T ss_dssp             --TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred             --CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEe
Confidence              12444499999999999999999999999999999997753     23334456789999999999999999999999


Q ss_pred             cCcchh
Q 017289          360 NEVLVP  365 (374)
Q Consensus       360 ~d~Fa~  365 (374)
                      |...+.
T Consensus       318 HgtgT~  323 (427)
T 3ho9_A          318 HGTSTP  323 (427)
T ss_dssp             CCCSCH
T ss_pred             cCCcCC
Confidence            966654

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=99.90  E-value=1.3e-22  Score=201.98  Aligned_cols=202  Identities=20%  Similarity=0.294  Sum_probs=150.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCCC
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGFP  125 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl~  125 (374)
                      .+|+.+++++||+|+|+++++||    ++++|+..+...                         ....++..++..+|+.
T Consensus        94 ~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~  173 (430)
T 1ox0_A           94 SLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN  173 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC
Confidence            47999999999999999999999    588886543210                         0013577889999994


Q ss_pred             CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHH
Q 017289          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR  205 (374)
Q Consensus       126 ~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  205 (374)
                        +|+++++++|+||+.||..|++.|++|++|++||+|+|.+.. |..        +            .++      ..
T Consensus       174 --Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~--------~------------~~~------~~  224 (430)
T 1ox0_A          174 --GVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PFA--------I------------AGF------QA  224 (430)
T ss_dssp             --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHH--------H------------HHH------HH
T ss_pred             --CceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHH--------H------------HHH------Hh
Confidence              699999999999999999999999999999999999998643 100        0            000      00


Q ss_pred             hCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCcc
Q 017289          206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTT  285 (374)
Q Consensus       206 ~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~l  285 (374)
                      .+                        .+..        ..+|..            .            .+| |+.    
T Consensus       225 ~~------------------------~ls~--------~~~p~~------------~------------~~p-Fd~----  243 (430)
T 1ox0_A          225 LT------------------------ALST--------TEDPTR------------A------------SIP-FDK----  243 (430)
T ss_dssp             TT------------------------CBCC--------CSSTTS------------S------------SCT-TBT----
T ss_pred             CC------------------------CccC--------CCCCCC------------C------------CCC-CCC----
Confidence            00                        0000        001211            1            122 322    


Q ss_pred             ccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          286 TAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       286 t~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                       ..|++.++|||+++||++++.|++.|.+++++|.|++...+     .|...+.+...++++||+++|++++|||++|+|
T Consensus       244 -~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H  322 (430)
T 1ox0_A          244 -DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAH  322 (430)
T ss_dssp             -TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECC
T ss_pred             -CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEe
Confidence             24667799999999999999999999999999999987643     233334456799999999999999999999999


Q ss_pred             CcchhHH
Q 017289          361 EVLVPII  367 (374)
Q Consensus       361 d~Fa~~~  367 (374)
                      ++|+...
T Consensus       323 gtgt~~~  329 (430)
T 1ox0_A          323 GTSTPAN  329 (430)
T ss_dssp             CCSCHHH
T ss_pred             CCcCccc
Confidence            9998764

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=99.90  E-value=2.5e-23  Score=207.19  Aligned_cols=202  Identities=18%  Similarity=0.327  Sum_probs=150.6

Q ss_pred             HHHHHHHHHHHHHHHcCC-CccccC----eEEEEeecCCC-------------C------------CcccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRL-NPSEVG----DIVVGTVLAPG-------------S------------TRAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl-~~~~ID----~vi~g~~~~~~-------------~------------~~~~~a~~va~~~G  123 (374)
                      ..+|+.+++++||+|||+ +++++|    +|++|+..+..             .            ....++..++..+|
T Consensus        88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  167 (431)
T 2ix4_A           88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG  167 (431)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence            568999999999999999 888898    69998765420             0            01246788999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHH-HH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSE-NV  202 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~  202 (374)
                      +.  +|+++++++|+||+.||..|++.|++|++|++||+|+|.+++....                     .++... .+
T Consensus       168 l~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~---------------------~~~~~~~~l  224 (431)
T 2ix4_A          168 FQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSV---------------------AGFSRSRAL  224 (431)
T ss_dssp             CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHH---------------------HHHHHTTCB
T ss_pred             CC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH---------------------HHHHhcccc
Confidence            94  6999999999999999999999999999999999999987651110                     000000 00


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD  282 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~  282 (374)
                      ..+|+.                                     +|            ++.+            +| |+  
T Consensus       225 s~~~~~-------------------------------------~~------------~~~~------------~p-fd--  240 (431)
T 2ix4_A          225 STKFNS-------------------------------------SP------------QEAS------------RP-FD--  240 (431)
T ss_dssp             CCTTTT-------------------------------------CG------------GGSC------------CT-TB--
T ss_pred             CccccC-------------------------------------Cc------------cccc------------cc-CC--
Confidence            000111                                     11            1111            22 22  


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEE
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLF  357 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~  357 (374)
                         ...+++.++|||+++||++++.|++.|.+++++|.|++...+     .|.....+...++++||+++|++++|||++
T Consensus       241 ---~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~v  317 (431)
T 2ix4_A          241 ---CDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYV  317 (431)
T ss_dssp             ---TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred             ---CCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence               123566699999999999999999999999999999998652     333344456799999999999999999999


Q ss_pred             EecCcchh
Q 017289          358 EINEVLVP  365 (374)
Q Consensus       358 ei~d~Fa~  365 (374)
                      |+|..++.
T Consensus       318 e~HgtgT~  325 (431)
T 2ix4_A          318 NAHATSTP  325 (431)
T ss_dssp             ECCCCSCH
T ss_pred             EEeCCcCc
Confidence            99987764

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.90  E-value=7.5e-23  Score=202.79  Aligned_cols=201  Identities=16%  Similarity=0.218  Sum_probs=149.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      +..+|+.+++++||+|+|+++++||    ++++|+..+...                         ....++..++..+|
T Consensus        78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  157 (415)
T 1tqy_B           78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG  157 (415)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence            3578999999999999999999999    888887643210                         01356888999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      ++  +|+++++++|+||+.||..|++.|++| +|++||+|+|.+.+ +..        +            .++      
T Consensus       158 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~-~~~--------~------------~~~------  207 (415)
T 1tqy_B          158 MR--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALD-PWG--------W------------VSQ------  207 (415)
T ss_dssp             CC--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCS-HHH--------H------------HHH------
T ss_pred             CC--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCC-HHH--------H------------HHH------
Confidence            94  799999999999999999999999999 99999999998433 100        0            000      


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      .+.+                        .+..          |.          ++++.+|            | |+.  
T Consensus       208 ~~~~------------------------~ls~----------~~----------~~~~~~~------------p-fd~--  228 (415)
T 1tqy_B          208 IASG------------------------RIST----------AT----------DPDRAYL------------P-FDE--  228 (415)
T ss_dssp             HTTS------------------------CBCC----------CS----------CGGGSCC------------T-TST--
T ss_pred             Hhcc------------------------CccC----------CC----------CCCCCcC------------C-CCC--
Confidence            0000                        0000          00          0111222            2 321  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCC-CceEEEEEEEEeccCCCCCC--CCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDPSVMG--IGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~-~p~a~i~g~~~~~~~p~~~~--~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                         ..+++.++|||+++||++++.|+++|. +++++|.|++...+......  .+...++++||+++|++++|||++|+|
T Consensus       229 ---~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~~~~~ai~~al~~Agl~~~dId~ve~H  305 (415)
T 1tqy_B          229 ---RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFAD  305 (415)
T ss_dssp             ---TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGGCCEEECC
T ss_pred             ---CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHcCCCHhHCCEEEEe
Confidence               235667999999999999999999999 99999999998754221111  177899999999999999999999999


Q ss_pred             Ccchh
Q 017289          361 EVLVP  365 (374)
Q Consensus       361 d~Fa~  365 (374)
                      ..++.
T Consensus       306 gtgt~  310 (415)
T 1tqy_B          306 GAGVP  310 (415)
T ss_dssp             CCCSH
T ss_pred             CCCCc
Confidence            98874

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.89  E-value=1.5e-22  Score=201.12  Aligned_cols=203  Identities=18%  Similarity=0.265  Sum_probs=150.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCC-------------CC-------------ccc-HHH----HH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPG-------------ST-------------RAM-ECR----MA  118 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~-------------~~-------------~~~-~a~----~v  118 (374)
                      ..+|+.+++++||+|||+++++||    +|++|+..+..             ..             .++ .+.    .+
T Consensus        73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i  152 (424)
T 1tqy_A           73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV  152 (424)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence            467999999999999999999999    69999765421             00             011 134    88


Q ss_pred             HHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHH
Q 017289          119 AFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGIT  198 (374)
Q Consensus       119 a~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (374)
                      +..+|+.  +|+++++++|+|++.||..|++.|++|++|++||+|+|.+.+ |...                    .+  
T Consensus       153 a~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~--------------------~~--  207 (424)
T 1tqy_A          153 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVV--------------------AC--  207 (424)
T ss_dssp             HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH--------------------HH--
T ss_pred             HHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHHH--------------------HH--
Confidence            9999994  699999999999999999999999999999999999998643 1100                    00  


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCc
Q 017289          199 SENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA  278 (374)
Q Consensus       199 a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi  278 (374)
                          ....|.                        +..       ...||+            ..+            +| 
T Consensus       208 ----~~~~~~------------------------ls~-------~~~~p~------------~~~------------rp-  227 (424)
T 1tqy_A          208 ----FDAIRA------------------------TTA-------RNDDPE------------HAS------------RP-  227 (424)
T ss_dssp             ----HHHTTC------------------------BCC-------CCSCGG------------GCC------------CT-
T ss_pred             ----HHhhcc------------------------ccC-------CCCCCC------------CCc------------cC-
Confidence                001111                        100       000221            222            22 


Q ss_pred             ccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCC
Q 017289          279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDD  353 (374)
Q Consensus       279 ~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~D  353 (374)
                      |+.     ..+++.++||+++|||++++.|++.|.+++++|.|++...+.     |...+.+...++++||+++|++++|
T Consensus       228 fd~-----~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~d  302 (424)
T 1tqy_A          228 FDG-----TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATD  302 (424)
T ss_dssp             TBT-----TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred             CCC-----CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence            322     235666999999999999999999999999999999986532     3333345579999999999999999


Q ss_pred             ccEEEecCcchhH
Q 017289          354 INLFEINEVLVPI  366 (374)
Q Consensus       354 ID~~ei~d~Fa~~  366 (374)
                      ||++|+|+.++..
T Consensus       303 Id~ve~Hgtgt~~  315 (424)
T 1tqy_A          303 IDYINAHGSGTRQ  315 (424)
T ss_dssp             CCEEECCCCCCHH
T ss_pred             CCEEEecCccCcC
Confidence            9999999999863

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=99.89  E-value=8.5e-23  Score=203.17  Aligned_cols=200  Identities=15%  Similarity=0.209  Sum_probs=147.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      +..+|+.+|+++||+|+|+++++||    ++++|+..+...                         ....++..++..+|
T Consensus        91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  170 (428)
T 3mqd_A           91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK  170 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence            3567999999999999999999999    688887543210                         01246788999999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHH
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVA  203 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  203 (374)
                      +  .+|+++|+++|+||+.||..|++.|++|++|++||+|+|+++..+..                      .      .
T Consensus       171 l--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~----------------------~------~  220 (428)
T 3mqd_A          171 I--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV----------------------L------F  220 (428)
T ss_dssp             C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH----------------------H------H
T ss_pred             C--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHH----------------------H------H
Confidence            9  47999999999999999999999999999999999999997641110                      0      0


Q ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCC
Q 017289          204 QRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDG  283 (374)
Q Consensus       204 ~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~  283 (374)
                      .+.+.                        +....        +          .+++..+            +| |+.  
T Consensus       221 ~~~~~------------------------ls~~~--------~----------~~p~~~~------------rp-fd~--  243 (428)
T 3mqd_A          221 DAMGA------------------------MSSKY--------N----------DTPSTAS------------RA-YDK--  243 (428)
T ss_dssp             HHTTC------------------------BCCTT--------T----------TSGGGSC------------CT-TBT--
T ss_pred             HHhhh------------------------hcccc--------c----------CCccccc------------Cc-ccC--
Confidence            01110                        00000        0          0011111            22 322  


Q ss_pred             ccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC---CCCCCHHHHHHHHHHHcCCCCCCccEEEec
Q 017289          284 TTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFEIN  360 (374)
Q Consensus       284 ~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~---~~~~~~~~A~~~Al~~AGl~~~DID~~ei~  360 (374)
                         ..++..++|||++|||++++.|+++|.+++++|.|++...+...   +.+.++..++++||+  |++ +||||+|+|
T Consensus       244 ---~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al~--gl~-~dId~ve~H  317 (428)
T 3mqd_A          244 ---NRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALS--TVT-SKIDYINPH  317 (428)
T ss_dssp             ---TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHHT--TCC-SCCCEEECC
T ss_pred             ---CCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--CCc-cccCEEEEe
Confidence               12344489999999999999999999999999999998764322   134467899999999  999 999999999


Q ss_pred             Ccchh
Q 017289          361 EVLVP  365 (374)
Q Consensus       361 d~Fa~  365 (374)
                      ...|.
T Consensus       318 gtgT~  322 (428)
T 3mqd_A          318 ATSTP  322 (428)
T ss_dssp             CCSCH
T ss_pred             CCCCC
Confidence            77764

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=99.88  E-value=1.3e-21  Score=194.88  Aligned_cols=200  Identities=19%  Similarity=0.240  Sum_probs=142.9

Q ss_pred             HHHHHHHHHHHHHHcCCC---ccccCeEEEEeecCCCC-----------C--------------cccHHHHHHHHcCCCC
Q 017289           75 DDLLAPVLKAVIEKTRLN---PSEVGDIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGFPE  126 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~---~~~ID~vi~g~~~~~~~-----------~--------------~~~~a~~va~~~Gl~~  126 (374)
                      .+|+.+++++||+|||++   +++| +|++|+..+...           .              ...++..++..+|+  
T Consensus       100 ~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl--  176 (434)
T 2gp6_A          100 QRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA--  176 (434)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC--
T ss_pred             HHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC--
Confidence            579999999999999983   2233 578887654320           0              01357789999999  


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHh
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRF  206 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  206 (374)
                      .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++....         +            .++      .+.
T Consensus       177 ~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------~------------~~~------~~~  229 (434)
T 2gp6_A          177 KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVP---------I------------AGF------AQM  229 (434)
T ss_dssp             CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHH---------H------------HHH------HTT
T ss_pred             CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------H------------HHH------HHH
Confidence            4799999999999999999999999999999999999998764100         0            000      000


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccc
Q 017289          207 GVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTT  286 (374)
Q Consensus       207 G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt  286 (374)
                      +                +       .+..       ...+|.            ..+            +| |+.     
T Consensus       230 ~----------------~-------~ls~-------~~~~p~------------~~~------------~p-fd~-----  249 (434)
T 2gp6_A          230 R----------------I-------VMST-------NNDDPA------------GAC------------RP-FDR-----  249 (434)
T ss_dssp             T----------------S-------SCCC-------CTTCTT------------TSC------------CS-SBT-----
T ss_pred             H----------------H-------HhcC-------CCCCCC------------Cce------------ec-ccc-----
Confidence            0                0       0000       000121            111            22 221     


Q ss_pred             cCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc-----CCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecC
Q 017289          287 AGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV-----DPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINE  361 (374)
Q Consensus       287 ~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d  361 (374)
                      ..+++.++|||+++||++++.|++.|.+++++|.|++...+     .|.....+...++++||+++|++++|||++|+| 
T Consensus       250 ~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~H-  328 (434)
T 2gp6_A          250 DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAH-  328 (434)
T ss_dssp             TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECC-
T ss_pred             cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEe-
Confidence            13556699999999999999999999999999999987652     233334456799999999999999999999999 


Q ss_pred             cchh
Q 017289          362 VLVP  365 (374)
Q Consensus       362 ~Fa~  365 (374)
                      +|..
T Consensus       329 gtgt  332 (434)
T 2gp6_A          329 ATGT  332 (434)
T ss_dssp             CCSC
T ss_pred             CCcC
Confidence            6643

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=99.87  E-value=1.5e-21  Score=192.93  Aligned_cols=200  Identities=15%  Similarity=0.220  Sum_probs=148.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCe-----EEEEeecCCC------------CC--------------cccHHHHHHHHc
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGD-----IVVGTVLAPG------------ST--------------RAMECRMAAFYA  122 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~-----vi~g~~~~~~------------~~--------------~~~~a~~va~~~  122 (374)
                      ..+|+.+++++||+|||++++++|.     |++|+..+..            ..              ...++..++..+
T Consensus        71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l  150 (406)
T 2vba_A           71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF  150 (406)
T ss_dssp             HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence            5679999999999999999988986     9999765431            00              124678899999


Q ss_pred             CCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHH
Q 017289          123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENV  202 (374)
Q Consensus       123 Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  202 (374)
                      |+  .+|+++++++|+||+.||..|++.|++|++|++||+|+|.++. +.                       ..  .  
T Consensus       151 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~-~~-----------------------~~--~--  200 (406)
T 2vba_A          151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCW-EM-----------------------AC--E--  200 (406)
T ss_dssp             TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH-HH-----------------------HH--H--
T ss_pred             cC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-hH-----------------------HH--H--
Confidence            99  4799999999999999999999999999999999999998754 10                       00  0  


Q ss_pred             HHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCC
Q 017289          203 AQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKD  282 (374)
Q Consensus       203 ~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~  282 (374)
                      ..++|.                        +..+      ...+|.            ..+            +| |+. 
T Consensus       201 ~~~~~~------------------------ls~~------~~~~p~------------~~~------------~p-fd~-  224 (406)
T 2vba_A          201 FDAMGA------------------------LSTK------YNDTPE------------KAS------------RT-YDA-  224 (406)
T ss_dssp             HHHTTC------------------------BCCS------CTTSGG------------GSC------------CT-TBT-
T ss_pred             Hhhccc------------------------cccc------cCCCCc------------ccc------------Cc-CcC-
Confidence            111121                        0000      000121            111            22 332 


Q ss_pred             CccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC---CCCCCHHHHHHHHHHHcCCCCCCccEEEe
Q 017289          283 GTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFEI  359 (374)
Q Consensus       283 ~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~---~~~~~~~~A~~~Al~~AGl~~~DID~~ei  359 (374)
                          ..++..++||++++||++++.|+++|.+++++|.|++...+...   +.+.+...++++||+++|   +||||+|+
T Consensus       225 ----~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~ai~~al~~ag---~dId~ve~  297 (406)
T 2vba_A          225 ----HRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVD---TPIDYLNS  297 (406)
T ss_dssp             ----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTCC---SCCCEEEC
T ss_pred             ----CCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhCC---CCccEEEe
Confidence                12455599999999999999999999999999999998754211   113456799999999999   99999999


Q ss_pred             cCcchhH
Q 017289          360 NEVLVPI  366 (374)
Q Consensus       360 ~d~Fa~~  366 (374)
                      |++++..
T Consensus       298 HgtgT~~  304 (406)
T 2vba_A          298 HGTSTPV  304 (406)
T ss_dssp             CCCSCHH
T ss_pred             eCccCcc
Confidence            9999863

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=99.86  E-value=2.7e-21  Score=208.20  Aligned_cols=196  Identities=20%  Similarity=0.322  Sum_probs=151.1

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCCC------------------cccHHHHHHHHcCCCCCCCcee
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGST------------------RAMECRMAAFYAGFPETVPLRT  132 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID~----vi~g~~~~~~~~------------------~~~~a~~va~~~Gl~~~~p~~~  132 (374)
                      .+|+.+++++||+|||++++++|.    |++|+.......                  ...++..++..+|+  .+|+++
T Consensus       117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t  194 (917)
T 2hg4_A          117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAMT  194 (917)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEEE
T ss_pred             HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeEe
Confidence            569999999999999999999995    888876543210                  01357788999999  469999


Q ss_pred             ecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHH
Q 017289          133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE  212 (374)
Q Consensus       133 v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~  212 (374)
                      |+++|+|++.||++|++.|++|++|++||+|+|.++.....                     ..     + .+.|     
T Consensus       195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~---------------------~~-----~-~~~~-----  242 (917)
T 2hg4_A          195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAF---------------------TE-----F-RSQG-----  242 (917)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHH---------------------HH-----H-TTSS-----
T ss_pred             ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhh---------------------Hh-----h-hhcc-----
Confidence            99999999999999999999999999999999988651100                     00     0 0000     


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCCC
Q 017289          213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQ  292 (374)
Q Consensus       213 ~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~  292 (374)
                                                                 .+++|..++            | |+     +..|++.
T Consensus       243 -------------------------------------------~ls~~g~~~------------p-Fd-----~~adG~~  261 (917)
T 2hg4_A          243 -------------------------------------------GLAADGRCK------------P-FS-----KAADGFG  261 (917)
T ss_dssp             -------------------------------------------CBCTTSCCC------------T-TB-----TTCCCBC
T ss_pred             -------------------------------------------CcCCccccC------------c-cc-----ccccCCC
Confidence                                                       012222222            2 32     3457777


Q ss_pred             cCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCC-----CCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          293 VSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG-----IGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       293 ~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~-----~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      .+||+++|||++.+.|++.|.+++++|.|++...+......     .+...++++||++|||+++||||+|+|+.++.
T Consensus       262 ~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~  339 (917)
T 2hg4_A          262 LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTR  339 (917)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCT
T ss_pred             CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCc
Confidence            99999999999999999999999999999998764432221     23458999999999999999999999999985

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=99.85  E-value=7.5e-21  Score=204.65  Aligned_cols=197  Identities=20%  Similarity=0.272  Sum_probs=149.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCe----EEEEeecCCCCC-----------------cccHHHHHHHHcCCCCCCCcee
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGD----IVVGTVLAPGST-----------------RAMECRMAAFYAGFPETVPLRT  132 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~----vi~g~~~~~~~~-----------------~~~~a~~va~~~Gl~~~~p~~~  132 (374)
                      ..+|+.+++++||+|||+++++||.    |++|+..+....                 ...++..++..+|+  .+|+++
T Consensus        95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~t  172 (915)
T 2qo3_A           95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSIS  172 (915)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEEE
T ss_pred             HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEEE
Confidence            4679999999999999999999994    888876544310                 11357889999999  469999


Q ss_pred             ecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHH
Q 017289          133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE  212 (374)
Q Consensus       133 v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~  212 (374)
                      |+++|+|++.||+.|++.|++|++|++||+|+|.++. |..        +            .+      ..+.|     
T Consensus       173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~-p~~--------~------------~~------~~~~~-----  220 (915)
T 2qo3_A          173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMAT-PGV--------F------------VD------FSRQR-----  220 (915)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSS-THH--------H------------HH------HHTTT-----
T ss_pred             ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcC-HHH--------H------------HH------Hhhhc-----
Confidence            9999999999999999999999999999999998765 110        0            00      00000     


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccCCCccccCCCCC
Q 017289          213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQ  292 (374)
Q Consensus       213 ~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~~~~lt~~~~~~  292 (374)
                                                                 .+..|..++            | |+.     ..|+..
T Consensus       221 -------------------------------------------~ls~~g~~~------------~-Fd~-----~adG~v  239 (915)
T 2qo3_A          221 -------------------------------------------ALAADGRSK------------A-FGA-----GADGFG  239 (915)
T ss_dssp             -------------------------------------------CBCSSCCCC------------T-TBT-----TCCCBC
T ss_pred             -------------------------------------------ccCCCCCcc------------c-ccC-----CCCcee
Confidence                                                       011122222            1 322     125566


Q ss_pred             cCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCC-----CCCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          293 VSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSV-----MGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       293 ~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~-----~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      .+||+++|||++.+.|++.|.+++++|.|++...+....     ...+...++++||++|||+++|||++|+|+.+|.
T Consensus       240 ~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~  317 (915)
T 2qo3_A          240 FSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTA  317 (915)
T ss_dssp             BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCT
T ss_pred             ecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCc
Confidence            999999999999999999999999999999986532211     1224568999999999999999999999998865

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=99.84  E-value=2.5e-20  Score=201.39  Aligned_cols=190  Identities=24%  Similarity=0.298  Sum_probs=142.6

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC------------------CcccHHHHHHHHcCCCCCCCcee
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLRT  132 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~------------------~~~~~a~~va~~~Gl~~~~p~~~  132 (374)
                      ..|+.+++++||+|||++++++|    ++++|.......                  ....++..++..+|+  .+|+++
T Consensus        81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~t  158 (965)
T 3hhd_A           81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSIA  158 (965)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEEE
T ss_pred             HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCeee
Confidence            45999999999999999999999    788886433210                  112467889999999  479999


Q ss_pred             ecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHH
Q 017289          133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE  212 (374)
Q Consensus       133 v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~  212 (374)
                      |+++|+|++.||++|++.|++|+||++|++|+|.+++...                     ..+      ..+.|.    
T Consensus       159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~---------------------~~~------~~~~~~----  207 (965)
T 3hhd_A          159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNT---------------------SVQ------FLRLGM----  207 (965)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHH---------------------HHH------HHHHTC----
T ss_pred             ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHH---------------------HHH------HHhccC----
Confidence            9999999999999999999999999999999998865110                     000      000110    


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCccccCCC
Q 017289          213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA  290 (374)
Q Consensus       213 ~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~lt~~~~  290 (374)
                                                                  +.+|..++            | |+.  +|++     
T Consensus       208 --------------------------------------------ls~~g~~~------------~-Fd~~adG~~-----  225 (965)
T 3hhd_A          208 --------------------------------------------LSPEGTCK------------A-FDTAGNGYC-----  225 (965)
T ss_dssp             --------------------------------------------BCTTCCCC------------T-TBTTCCSBC-----
T ss_pred             --------------------------------------------cCCCCccc------------c-chhccCCcc-----
Confidence                                                        11122222            1 321  3444     


Q ss_pred             CCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCC------CCHHHHHHHHHHHcCCCCCCccEEEecCcch
Q 017289          291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG------IGPAVAIPAAVKSAGLQIDDINLFEINEVLV  364 (374)
Q Consensus       291 ~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~------~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa  364 (374)
                        .+||+++|||++.+.|+    +++++|+|++...+.....+      .+...++++||++|||+++||||+|.|..+|
T Consensus       226 --~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT  299 (965)
T 3hhd_A          226 --RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGT  299 (965)
T ss_dssp             --BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCC
T ss_pred             --ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCC
Confidence              79999999999999886    47889999998765433221      2356899999999999999999999999998


Q ss_pred             h
Q 017289          365 P  365 (374)
Q Consensus       365 ~  365 (374)
                      .
T Consensus       300 ~  300 (965)
T 3hhd_A          300 K  300 (965)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.81  E-value=1.3e-19  Score=172.56  Aligned_cols=109  Identities=17%  Similarity=0.147  Sum_probs=93.1

Q ss_pred             cccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccC
Q 017289           58 RTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQC  137 (374)
Q Consensus        58 ~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~ac  137 (374)
                      +|++.++ .....+.+..+|+.+|+++||+|+|+++++||.|++++..+... .++.+..++..+|++ ++|+++++++|
T Consensus        36 ~~gi~~r-~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC  112 (313)
T 1zow_A           36 MTGIKER-HWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMP-FPTVANMLQERLGTG-KVASMDQLAAC  112 (313)
T ss_dssp             HHCCSEE-ECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHHTCC-SCCEEEEECGG
T ss_pred             hhCceEE-EecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCcEEEECCcC
Confidence            4555432 23346789999999999999999999999999999998765432 356789999999996 58999999999


Q ss_pred             chHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          138 SSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       138 aSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      +|++.+|..|++.|++|++|++||+|+|.++.
T Consensus       113 as~~~al~~A~~~i~~g~~~~vLv~g~e~~s~  144 (313)
T 1zow_A          113 SGFMYSMITAKQYVQSGDYHNILVVGADKLSK  144 (313)
T ss_dssp             GHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGG
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence            99999999999999999999999999998754

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=99.81  E-value=2.7e-19  Score=171.94  Aligned_cols=97  Identities=14%  Similarity=0.119  Sum_probs=88.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+|+|+++++||.|++++..+... .++++..++..+|++ ++|+++++++|+|+..+|..|++
T Consensus        57 ~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A~~  134 (335)
T 1u6e_A           57 DDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQ-TPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAAAD  134 (335)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCS-SSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998765432 457889999999995 68999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCC
Q 017289          150 AIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s  168 (374)
                      .|++|+++.+||+|+|.++
T Consensus       135 ~i~~g~~~~vLv~g~e~~s  153 (335)
T 1u6e_A          135 MIRGGGAATMLVVGTEKLS  153 (335)
T ss_dssp             HHHHTSCSSEEEEEEEECG
T ss_pred             HHHcCCCCEEEEEEEcccc
Confidence            9999999999999999875

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.80  E-value=3.7e-19  Score=169.00  Aligned_cols=96  Identities=16%  Similarity=0.151  Sum_probs=86.6

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      .+..+|+.+|+++||+|+|+++++||.|++|+..+... .++++..++..+|++ +.|+++++++|+|+..+|..|++.|
T Consensus        48 ~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i  125 (309)
T 2ebd_A           48 ETITYMATQAAKEALREANLSPEELDLIILATLTPQKR-FPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFI  125 (309)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSS-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHH
Confidence            67899999999999999999999999999998765432 456889999999996 4699999999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|++|++||+|+|.++.
T Consensus       126 ~~g~~~~vlv~g~e~~s~  143 (309)
T 2ebd_A          126 KSGKAKNVLVIGAEKLSE  143 (309)
T ss_dssp             HTTSCSEEEEEEEEEGGG
T ss_pred             HCCCCCEEEEEEeccccc
Confidence            999999999999998753

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=99.77  E-value=4.7e-18  Score=163.47  Aligned_cols=101  Identities=20%  Similarity=0.181  Sum_probs=91.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHH
Q 017289           68 GFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADV  147 (374)
Q Consensus        68 ~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~A  147 (374)
                      ...+.+..+|+.+|+++||+++|+++++||.|++++..+... .++.+..++..+|++.++|+++++++|+|+..+|..|
T Consensus        59 ~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A  137 (333)
T 4dfe_A           59 AEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFV-FPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATA  137 (333)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHH
Confidence            345788999999999999999999999999999998765443 4577899999999965789999999999999999999


Q ss_pred             HHHHHcCCCCEEEEEeeccCCC
Q 017289          148 ATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       148 a~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      ++.|++|.++.+||+|+|.++.
T Consensus       138 ~~~i~~g~~~~vLvvg~e~~s~  159 (333)
T 4dfe_A          138 DSFIRSGQHRTALVIGAETFSR  159 (333)
T ss_dssp             HHHHHTTSCSEEEEEEEEEGGG
T ss_pred             HHHHHcCCCCEEEEEEeecccc
Confidence            9999999999999999998764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.76  E-value=3.1e-18  Score=191.74  Aligned_cols=166  Identities=17%  Similarity=0.238  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCCC-----------------------CcccHHHHHHH-H
Q 017289           75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGS-----------------------TRAMECRMAAF-Y  121 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~-~~~----ID----~vi~g~~~~~~~-----------------------~~~~~a~~va~-~  121 (374)
                      ..|+++++++||+|||++ +.+    |+    ++++|+..+...                       ....++..++. .
T Consensus      1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A         1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp             HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence            458899999999999994 766    44    566665433200                       01124556777 4


Q ss_pred             cCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHH
Q 017289          122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN  201 (374)
Q Consensus       122 ~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  201 (374)
                      +|+  .+|+++++++|+||+.||+.|++.|++|+||++||+|+|.++....                      ++     
T Consensus      1292 lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~----------------------~~----- 1342 (1887)
T 2uv8_A         1292 ISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGS----------------------FE----- 1342 (1887)
T ss_dssp             TCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHH----------------------HH-----
T ss_pred             cCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH----------------------HH-----
Confidence            899  5799999999999999999999999999999999999998643111                      00     


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCccc-
Q 017289          202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-  280 (374)
Q Consensus       202 ~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~-  280 (374)
                       ....|.+-+..+++       + +    |                         .++++.+|            | |+ 
T Consensus      1343 -f~~m~als~~~~e~-------~-~----g-------------------------~~p~~~~R------------P-fd~ 1371 (1887)
T 2uv8_A         1343 -FGNMKATSNTLEEF-------E-H----G-------------------------RTPAEMSR------------P-ATT 1371 (1887)
T ss_dssp             -HHHTTCBCCHHHHH-------H-T----T-------------------------CCGGGSCC------------T-TBT
T ss_pred             -HHHhhhhccchhhh-------c-c----c-------------------------CCCccCcC------------C-Ccc
Confidence             01112211100000       0 0    0                         12233333            2 32 


Q ss_pred             -CCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc
Q 017289          281 -KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV  327 (374)
Q Consensus       281 -~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~  327 (374)
                       .+|++       .+||++++||++.+.|+++|.+++++|.|++.+++
T Consensus      1372 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~D 1412 (1887)
T 2uv8_A         1372 TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATD 1412 (1887)
T ss_dssp             TCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC
T ss_pred             cCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecC
Confidence             23555       89999999999999999999999999999998764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.76  E-value=1.6e-18  Score=202.42  Aligned_cols=203  Identities=20%  Similarity=0.236  Sum_probs=141.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC--------eEEEEeecCCCC-----------------------CcccHHHHHH-HH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG--------DIVVGTVLAPGS-----------------------TRAMECRMAA-FY  121 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID--------~vi~g~~~~~~~-----------------------~~~~~a~~va-~~  121 (374)
                      ..+|+.+++++||+|||+++++|+        ++++|+..+...                       .....+..++ .+
T Consensus      2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D         2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp             HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence            457999999999999999998885        688887543210                       0011334444 45


Q ss_pred             cCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHH-H
Q 017289          122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITS-E  200 (374)
Q Consensus       122 ~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-~  200 (374)
                      +|+  .+|+++|+++|+||+.||+.|++.|++|++|++||+|+|.++...+..       +          ..++..+ .
T Consensus      2727 lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~-------f----------~~~~als~~ 2787 (3089)
T 3zen_D         2727 VGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIG-------F----------GDMAATADT 2787 (3089)
T ss_dssp             TCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-------H----------HHHTCBCCH
T ss_pred             cCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHH-------H----------HHhhhhhcc
Confidence            699  479999999999999999999999999999999999999875421100       0          0000000 0


Q ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCccc
Q 017289          201 NVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK  280 (374)
Q Consensus       201 ~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~  280 (374)
                      .++.+++.                                                 +++..+|            | |+
T Consensus      2788 ~~~~~~~~-------------------------------------------------sp~~~cr------------p-Fd 2805 (3089)
T 3zen_D         2788 EMMRAKGI-------------------------------------------------SDSKFSR------------A-ND 2805 (3089)
T ss_dssp             HHHHHTTC-------------------------------------------------CTTTSCC------------S-SB
T ss_pred             hhhhhccC-------------------------------------------------CcccccC------------c-cc
Confidence            11111111                                                 1112222            2 32


Q ss_pred             C--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCCCCC-------------CCHHHHHHHHHH
Q 017289          281 K--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMG-------------IGPAVAIPAAVK  345 (374)
Q Consensus       281 ~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~~~~-------------~~~~~A~~~Al~  345 (374)
                      .  +|++       ++||+++|||++.+.|++.|.++++.|.+.+... |+...+             .+...++++||+
T Consensus      2806 ~~~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~-Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~ 2877 (3089)
T 3zen_D         2806 RRRLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFA-DGVHTSIPAPGLGALGAARGGRESTLARSLA 2877 (3089)
T ss_dssp             TTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEC-CCCCCCSSCCCCGGGGGSTTGGGSHHHHHHH
T ss_pred             cCCCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEec-CCcccCccCCchhHHhHhhhhHHHHHHHHHH
Confidence            2  3555       8999999999999999999999999777776543 322111             123368999999


Q ss_pred             HcCCCCCCccEEEecCcchh
Q 017289          346 SAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       346 ~AGl~~~DID~~ei~d~Fa~  365 (374)
                      ++||+++||||+|.|.++|.
T Consensus      2878 ~AGl~p~DIdyVEaHGTGT~ 2897 (3089)
T 3zen_D         2878 QLGVGADDIAVISKHDTSTL 2897 (3089)
T ss_dssp             TTTCCGGGEEEEECCCCCCT
T ss_pred             HcCCCHHHeeEEEEecCCcc
Confidence            99999999999999999875

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.76  E-value=4.9e-18  Score=162.30  Aligned_cols=96  Identities=17%  Similarity=0.206  Sum_probs=86.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      ++.+..+|+.+|+++||+|+|+++++||.|++|+..+... .++++..++..+|+  ++|+++++++|+|++.+|..|++
T Consensus        46 ~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~-~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~  122 (322)
T 1ub7_A           46 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA  122 (322)
T ss_dssp             TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHH
Confidence            4678899999999999999999999999999998765432 34678999999999  58999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCC
Q 017289          150 AIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s  168 (374)
                      .|++|++|++||+|+|.++
T Consensus       123 ~i~~g~~~~vlv~g~e~~s  141 (322)
T 1ub7_A          123 LVEAGLAQKVLAVGAEALS  141 (322)
T ss_dssp             HHHTTSCSEEEEEEEECGG
T ss_pred             HHHcCCCCEEEEEEechhc
Confidence            9999999999999999865

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.76  E-value=4e-18  Score=162.60  Aligned_cols=97  Identities=16%  Similarity=0.188  Sum_probs=87.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++|+..+... .+.++..++..+|++ ++|+++++++|+|++.+|..|++
T Consensus        47 ~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~-~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~  124 (317)
T 1hnj_A           47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ  124 (317)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCC-CCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHH
Confidence            4678899999999999999999999999999998765432 456889999999996 48999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCC
Q 017289          150 AIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s  168 (374)
                      .|++|++|++||+|+|.++
T Consensus       125 ~i~~g~~~~vlv~g~e~~s  143 (317)
T 1hnj_A          125 YVKSGAVKYALVVGSDVLA  143 (317)
T ss_dssp             HHHTTSCSEEEEEEEECHH
T ss_pred             HHHCCCCCEEEEEEechhc
Confidence            9999999999999999764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.75  E-value=1.1e-17  Score=186.92  Aligned_cols=166  Identities=17%  Similarity=0.273  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCC-------C-------------C---cccHHHHHHH-H
Q 017289           75 DDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPG-------S-------------T---RAMECRMAAF-Y  121 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~-~~~----ID----~vi~g~~~~~~-------~-------------~---~~~~a~~va~-~  121 (374)
                      ..|+.+++++||++||++ +.+    |+    ++++|+..+..       .             .   ...++..++. .
T Consensus      1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A         1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp             HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence            458899999999999997 666    44    67777654430       0             0   0123556777 4


Q ss_pred             cCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHH
Q 017289          122 AGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSEN  201 (374)
Q Consensus       122 ~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  201 (374)
                      +|+  .+|.++++++|+|++.+|+.|++.|++|+||++||+|+|.++....                      ++     
T Consensus      1267 lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~----------------------~~----- 1317 (1878)
T 2uv9_A         1267 LSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGS----------------------YE----- 1317 (1878)
T ss_dssp             CCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHH----------------------HH-----
T ss_pred             cCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHH----------------------HH-----
Confidence            899  5799999999999999999999999999999999999998653110                      00     


Q ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCccc-
Q 017289          202 VAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-  280 (374)
Q Consensus       202 ~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~-  280 (374)
                      + ...|.+-...++++        +    |                         .++++.+|+             |+ 
T Consensus      1318 f-~~m~als~~~de~a--------~----g-------------------------~~p~~~~RP-------------fd~ 1346 (1878)
T 2uv9_A         1318 F-ANMGATSNAKEEFA--------R----G-------------------------REPGEMSRP-------------TST 1346 (1878)
T ss_dssp             H-HHHTCBCCHHHHHT--------T----T-------------------------CCTTSSCCS-------------SBT
T ss_pred             H-HHhhhhccchhhhh--------c----C-------------------------CCcccCcCC-------------Ccc
Confidence            0 11121111001110        0    0                         122334432             32 


Q ss_pred             -CCCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEecc
Q 017289          281 -KDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGV  327 (374)
Q Consensus       281 -~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~  327 (374)
                       .+|++       .+||++++||++.+.|+++|.+++++|.|++.+++
T Consensus      1347 ~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~D 1387 (1878)
T 2uv9_A         1347 TRNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATD 1387 (1878)
T ss_dssp             TCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECC
T ss_pred             CCCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecC
Confidence             13544       89999999999999999999999999999998754

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.73  E-value=1.4e-17  Score=160.39  Aligned_cols=97  Identities=18%  Similarity=0.138  Sum_probs=87.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++|+..+... .++.+..++..+|++ ++|+++++++|+|++.+|..|++
T Consensus        56 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~  133 (339)
T 1mzj_A           56 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD  133 (339)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-CChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHH
Confidence            3678899999999999999999999999999998765542 356889999999996 48999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCC
Q 017289          150 AIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s  168 (374)
                      .|++|.++.+||+|+|.++
T Consensus       134 ~i~~G~~~~vLv~g~e~~s  152 (339)
T 1mzj_A          134 AVESGGSRHVLVVATERMT  152 (339)
T ss_dssp             HHHHSSCSCEEEEEEEEGG
T ss_pred             HHHCCCCCEEEEEEEcccc
Confidence            9999999999999999875

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.73  E-value=1.4e-18  Score=189.07  Aligned_cols=94  Identities=15%  Similarity=0.168  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHHHcCCC-ccc----cC----eEEEEeecCCCC-----------C------------cccHHHHHHH-
Q 017289           74 ADDLLAPVLKAVIEKTRLN-PSE----VG----DIVVGTVLAPGS-----------T------------RAMECRMAAF-  120 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~-~~~----ID----~vi~g~~~~~~~-----------~------------~~~~a~~va~-  120 (374)
                      ...|+.+++++||+|||++ +.+    |+    ++++|+..+...           .            ....+..++. 
T Consensus      1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A         1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp             STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence            3569999999999999997 655    44    556665433310           0            0113456666 


Q ss_pred             HcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          121 YAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       121 ~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .+|+  .+|+++++++|+|++.||..|++.|++|++|++||+|+|.++.
T Consensus      1092 ~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp 1138 (1688)
T 2pff_A         1092 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE 1138 (1688)
T ss_dssp             SCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCT
T ss_pred             HcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCH
Confidence            6899  4799999999999999999999999999999999999998764

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=99.71  E-value=3.9e-16  Score=149.48  Aligned_cols=98  Identities=15%  Similarity=0.148  Sum_probs=89.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.++.+|+.+|+++||+++|+++++||.|++++..+... .++.+..++..+|++ +.|+++++.+|+++..++..|+.
T Consensus        54 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~  131 (323)
T 3il3_A           54 EDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHA-YPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVADQ  131 (323)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHHH
Confidence            5689999999999999999999999999999998766543 456899999999996 78999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+||+|+|.++.
T Consensus       132 ~i~~g~~~~vLvvg~e~~s~  151 (323)
T 3il3_A          132 FIRAGKVKKALVIGSDLNSR  151 (323)
T ss_dssp             HHHTTSCSEEEEEEEEEGGG
T ss_pred             HHHCCCCCEEEEEEeecccc
Confidence            99999999999999999865

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=99.70  E-value=7.1e-17  Score=157.56  Aligned_cols=96  Identities=16%  Similarity=0.079  Sum_probs=85.3

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeec-ccCchHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATA  150 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~-~acaSg~~ai~~Aa~~  150 (374)
                      .+..+|+.+|+++||+++|+++++||.|++++..+..  .++.+..++..+|++..+|+++++ ++|+|++.+|..|++.
T Consensus        93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~  170 (374)
T 2h84_A           93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGII--IPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASL  170 (374)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999998876432  456788999999996346899997 8999999999999999


Q ss_pred             HHcCCCCEEEEEeeccCCC
Q 017289          151 IKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       151 I~sG~~d~vLv~G~E~~s~  169 (374)
                      |++|.++.|||+|+|.++.
T Consensus       171 i~~g~~~~vLv~g~e~~s~  189 (374)
T 2h84_A          171 AKASPRNRILVVCTEVCSL  189 (374)
T ss_dssp             HTTCTTCEEEEEEEECCGG
T ss_pred             HHcCCCCEEEEEEEEecch
Confidence            9999999999999999864

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=99.70  E-value=2.3e-17  Score=162.23  Aligned_cols=96  Identities=16%  Similarity=0.121  Sum_probs=85.1

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceee-cccCchHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATA  150 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v-~~acaSg~~ai~~Aa~~  150 (374)
                      .+..+|+.+|+++||+++|+++++||.|++++..+.  ..++.+..++..+|++...+++.+ +++|+||..+|..|++.
T Consensus       111 ~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~--~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~  188 (393)
T 1ted_A          111 EHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF--IAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY  188 (393)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCC--CSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC--ccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence            457899999999999999999999999999887663  245778999999999644567888 99999999999999999


Q ss_pred             HHcCCCCEEEEEeeccCCC
Q 017289          151 IKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       151 I~sG~~d~vLv~G~E~~s~  169 (374)
                      |++|.++.|||+|+|.++.
T Consensus       189 i~~G~~~~vLv~g~e~~s~  207 (393)
T 1ted_A          189 VRAHPAMKALVVCIELCSV  207 (393)
T ss_dssp             HHHSTTCEEEEEEEEECGG
T ss_pred             HHcCCCCEEEEEEEEeccc
Confidence            9999999999999999864

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=99.69  E-value=4e-17  Score=159.91  Aligned_cols=96  Identities=13%  Similarity=0.094  Sum_probs=85.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceee-cccCchHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATA  150 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v-~~acaSg~~ai~~Aa~~  150 (374)
                      .+..+|+.+|+++||+++|+++++||.|++++..+.  ..++.+..++..+|++..+|++++ +++|+|++.+|..|++.
T Consensus        82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~--~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~  159 (382)
T 1u0m_A           82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGF--MMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDF  159 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSC--CSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCC--CCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHH
Confidence            456799999999999999999999999999887653  245678899999999644699999 99999999999999999


Q ss_pred             HHcCCCCEEEEEeeccCCC
Q 017289          151 IKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       151 I~sG~~d~vLv~G~E~~s~  169 (374)
                      |++|.++.+||+|+|.++.
T Consensus       160 i~~g~~~~vLv~g~e~~s~  178 (382)
T 1u0m_A          160 CTAYPEANALIVACEFCSL  178 (382)
T ss_dssp             HHHSTTCEEEEEEEEEGGG
T ss_pred             HHcCCCCEEEEEEEeccch
Confidence            9999999999999998754

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.68  E-value=1.2e-16  Score=153.38  Aligned_cols=93  Identities=18%  Similarity=0.189  Sum_probs=83.1

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      .+..+|+.+|+++||+++|+  ++||.|++++..+... .++.+..++..+|++ ++|+++++++|+|+..+|..|++.|
T Consensus        51 ~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~-~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i  126 (331)
T 2x3e_A           51 LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFC-CPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLI  126 (331)
T ss_dssp             CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEE-ESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCC-CChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHH
Confidence            57899999999999999999  8999999987655432 345788999999996 4899999999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCC
Q 017289          152 KAGLYDIGIAAGLESMT  168 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s  168 (374)
                      ++|.++.+||+|+|.++
T Consensus       127 ~~g~~~~vLv~g~e~~s  143 (331)
T 2x3e_A          127 SAGLADSALLVGVDTFS  143 (331)
T ss_dssp             HTTSCSEEEEEEEECGG
T ss_pred             HcCCCCEEEEEEeeccc
Confidence            99999999999999875

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=99.68  E-value=4.3e-16  Score=150.48  Aligned_cols=99  Identities=12%  Similarity=0.153  Sum_probs=89.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .+..+..++..+|++.++|+++++++|+|+..++..|++
T Consensus        64 ~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~  142 (345)
T 3s21_A           64 QDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYL-EPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAAR  142 (345)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCS-SSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998765443 457789999999997568999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+||+|+|.++.
T Consensus       143 ~i~~g~~~~vLvvg~e~~s~  162 (345)
T 3s21_A          143 MLERGEIDYALVVDGETANL  162 (345)
T ss_dssp             HHHHTSCSEEEEEEEECCHH
T ss_pred             HHHCCCCCEEEEEEEcccch
Confidence            99999999999999999864

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=99.66  E-value=6.4e-17  Score=153.96  Aligned_cols=91  Identities=15%  Similarity=0.277  Sum_probs=80.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      +..+|+.+|+++||+++|++++|||.|++|+..+..    ..+..++..+|+    |++.++.+|+|+..++..|+..|+
T Consensus        54 a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~----~~A~~va~~Lgi----pafdV~~ACsg~~~AL~~Aa~~I~  125 (347)
T 3lma_A           54 AERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN----VTANYVARHLKI----PFLCLFGACSTSMESIAISSALID  125 (347)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS----TTHHHHHHHHCC----CEEEBCCSTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch----hHHHHHHHHhCC----CEEEecChhHHHHHHHHHHHHHHh
Confidence            457799999999999999999999999999876521    256677777765    799999999999999999999999


Q ss_pred             cCCCCEEEEEeeccCCCCc
Q 017289          153 AGLYDIGIAAGLESMTVNS  171 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~~~  171 (374)
                      +|.++.|||+|+|++++.+
T Consensus       126 sG~~~~VLVVGaE~~S~ae  144 (347)
T 3lma_A          126 GGFAKRALAATSSHNATAE  144 (347)
T ss_dssp             TTSCSEEEEEEEECGGGTT
T ss_pred             cCCCCEEEEEEeccccchh
Confidence            9999999999999998743

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.66  E-value=1.9e-16  Score=185.09  Aligned_cols=188  Identities=24%  Similarity=0.315  Sum_probs=140.0

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC------------------CcccHHHHHHHHcCCCCCCCcee
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS------------------TRAMECRMAAFYAGFPETVPLRT  132 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~------------------~~~~~a~~va~~~Gl~~~~p~~~  132 (374)
                      ..|+.+++++||+|||++++.++    +|++|.......                  ....++..++..+|+  ++|+++
T Consensus        79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t  156 (2512)
T 2vz8_A           79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT  156 (2512)
T ss_dssp             HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred             HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence            45899999999999999987765    688886543210                  012357789999999  599999


Q ss_pred             ecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHHhCCCHHH
Q 017289          133 VNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQE  212 (374)
Q Consensus       133 v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~G~t~e~  212 (374)
                      |+++|+|++.||++|++.|++|+||++||+|++.+.. |..                    ..++      .+.|     
T Consensus       157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~-p~~--------------------~~~~------~~~~-----  204 (2512)
T 2vz8_A          157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLK-PNS--------------------SLQF------MKLG-----  204 (2512)
T ss_dssp             EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCC-HHH--------------------HHHH------HHTT-----
T ss_pred             eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccC-HHH--------------------HHHH------ccCC-----
Confidence            9999999999999999999999999999999997654 110                    0000      0111     


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC--CCccccCCC
Q 017289          213 QDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK--DGTTTAGNA  290 (374)
Q Consensus       213 ~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~--~~~lt~~~~  290 (374)
                                                                 .+++|..+|            | |+.  +|++     
T Consensus       205 -------------------------------------------~ls~~g~c~------------~-Fd~~adG~~-----  223 (2512)
T 2vz8_A          205 -------------------------------------------MLSQDGTCR------------S-FDAEGTGYC-----  223 (2512)
T ss_dssp             -------------------------------------------CBCTTCSCC------------S-SSTTCCCBC-----
T ss_pred             -------------------------------------------CCCCCCCCC------------C-CCCCCCCcc-----
Confidence                                                       122333333            2 443  4666     


Q ss_pred             CCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCCC---C---CCCCHHHHHHHHHHHcCCCCCCccEEEecCcc
Q 017289          291 SQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPS---V---MGIGPAVAIPAAVKSAGLQIDDINLFEINEVL  363 (374)
Q Consensus       291 ~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p~---~---~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~F  363 (374)
                        .+||+++|||.+.+.|+    ++++.|.|++.+.+...   .   .+.+...++++||++|||+|+||||+|.|-.=
T Consensus       224 --~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTg  296 (2512)
T 2vz8_A          224 --RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTG  296 (2512)
T ss_dssp             --BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCC
T ss_pred             --eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCC
Confidence              89999999999999886    58899999998754321   1   11234699999999999999999999999543

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=99.66  E-value=5e-16  Score=169.08  Aligned_cols=94  Identities=11%  Similarity=-0.005  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC-CCceeecccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET-VPLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~-~p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ..+|+.+|+++||+++|+++++||.|++++..+..  .+..+..++..+|++.. .+++.++++|++|..||..|.++|+
T Consensus       689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~--~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~  766 (979)
T 3tsy_A          689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVE--MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAE  766 (979)
T ss_dssp             HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCC--SSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCC--CCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHH
Confidence            45699999999999999999999999999854432  45788999999999521 3579999999999999999999999


Q ss_pred             cCCCCEEEEEeeccCCC
Q 017289          153 AGLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~  169 (374)
                      +|.++.|||+|+|.++.
T Consensus       767 sG~~~~vLvvg~e~~~~  783 (979)
T 3tsy_A          767 NNAGARVLVVCSEITVV  783 (979)
T ss_dssp             TSTTCEEEEEEEECTTT
T ss_pred             hCCCCEEEEEEEEecch
Confidence            99999999999998643

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=99.66  E-value=9e-16  Score=148.77  Aligned_cols=99  Identities=13%  Similarity=0.052  Sum_probs=90.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .++.+..++..+|++.++++++++.+|+++..+|..|+.
T Consensus        62 ~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~  140 (354)
T 4efi_A           62 AQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYR-LPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMN  140 (354)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998765443 467899999999996579999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.|||+|+|.++.
T Consensus       141 ~i~~g~~~~vLvvg~e~~s~  160 (354)
T 4efi_A          141 LIQTGAAKRVLLAVGDTISK  160 (354)
T ss_dssp             HHHTTSCSEEEEEEEECGGG
T ss_pred             HHHCCCCCEEEEEEechhcc
Confidence            99999999999999999865

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=99.65  E-value=2.2e-15  Score=146.61  Aligned_cols=99  Identities=13%  Similarity=0.118  Sum_probs=90.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .++.+..++..+|++.+++++.++.+|+||..+|..|+.
T Consensus        76 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~  154 (365)
T 3gwa_A           76 PRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYV-LPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKG  154 (365)
T ss_dssp             TTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCS-BSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHH
Confidence            4678999999999999999999999999999998765443 467789999999997579999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.|||+|+|+++.
T Consensus       155 ~i~~g~~~~vLvvg~e~~s~  174 (365)
T 3gwa_A          155 LVETGAARCVLLLTADTYSK  174 (365)
T ss_dssp             HHHTTSCSEEEEEEEECGGG
T ss_pred             HHHcCCCCEEEEEEEchhhc
Confidence            99999999999999999875

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=99.64  E-value=2.5e-15  Score=147.49  Aligned_cols=94  Identities=13%  Similarity=0.083  Sum_probs=85.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      +..+|+.+|+++||+++|+++++||.|++++..+... .+..+..++..+|+  +.++++++.+|+++..+|..|+..|+
T Consensus       116 ~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~-~p~~a~~v~~~LGl--~~~~~dv~~aC~g~~~aL~~A~~~i~  192 (392)
T 3led_A          116 ILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRA-YPAMAIEVQNALGL--GGFAFDMNVACSSATFGLKTAADFVG  192 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCS-BSCHHHHHHHHTTC--CSEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCC-ccHHHHHHHHHhCC--CCeEEEECCccHHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999998765543 45678999999999  47999999999999999999999999


Q ss_pred             cCCCCEEEEEeeccCCC
Q 017289          153 AGLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~  169 (374)
                      +|.++.|||+|+|.+|.
T Consensus       193 ~g~~~~vLvvg~E~~S~  209 (392)
T 3led_A          193 GGSVDAVLMVNPEICSG  209 (392)
T ss_dssp             TTSCSEEEEEEEEEGGG
T ss_pred             CCCCCEEEEEeehhcCC
Confidence            99999999999998864

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=99.63  E-value=2.9e-15  Score=145.43  Aligned_cols=98  Identities=18%  Similarity=0.236  Sum_probs=89.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .++.+..++..+|++ +.|++.++.+|+++..+|..|+.
T Consensus        70 ~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~  147 (359)
T 3h78_A           70 PEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHH-DPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARG  147 (359)
T ss_dssp             TTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSS-BSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCC-CCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHH
Confidence            4678899999999999999999999999999998765443 456799999999996 78999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.|||+|+|.++.
T Consensus       148 ~i~sG~~~~vLvvg~e~~S~  167 (359)
T 3h78_A          148 QILAGLARHVLVVCGEVLSK  167 (359)
T ss_dssp             HHHTTSCSEEEEEEEEECGG
T ss_pred             HHHCCCcCEEEEEEEchhcc
Confidence            99999999999999999865

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=99.62  E-value=6.6e-15  Score=142.83  Aligned_cols=96  Identities=14%  Similarity=0.188  Sum_probs=85.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      +..+|+.+|+++||+++|+++++||.|++++..........++..++..+|++ +.|++.++.+|+++..+|..|...|+
T Consensus        53 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~  131 (357)
T 3s3l_A           53 APPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLG  131 (357)
T ss_dssp             SHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHH
Confidence            78999999999999999999999999999987411112346789999999995 78999999999999999999999999


Q ss_pred             cCCCC--EEEEEeeccCCC
Q 017289          153 AGLYD--IGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d--~vLv~G~E~~s~  169 (374)
                      +|.++  .|||+|+|+++.
T Consensus       132 sg~~~~~~vLvvg~e~~s~  150 (357)
T 3s3l_A          132 SGIGAGHAALLTTGDRFAG  150 (357)
T ss_dssp             TTSSSSSEEEEEEEECCCT
T ss_pred             cCCCCCCEEEEEEEecccc
Confidence            99999  999999999874

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=99.57  E-value=3.4e-14  Score=137.31  Aligned_cols=98  Identities=17%  Similarity=0.283  Sum_probs=88.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .+..+..++..+|++ +.+++.++.+|+++..++..|..
T Consensus        58 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~-~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~  135 (350)
T 4ewp_A           58 AEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHA-TPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADA  135 (350)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCS-SSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCC-CCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhh
Confidence            5678999999999999999999999999999998776543 467788999999996 67899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|..+.+||+++|.++.
T Consensus       136 ~i~~g~~~~~Lvv~~E~~s~  155 (350)
T 4ewp_A          136 LVRSGTARHVLVVGVERLSD  155 (350)
T ss_dssp             HHHTTSCSEEEEEEEEEGGG
T ss_pred             hhhCCCccceeEeeeeecee
Confidence            99999999999999998764

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=99.56  E-value=8.9e-15  Score=143.85  Aligned_cols=94  Identities=11%  Similarity=0.076  Sum_probs=84.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||++  +++++||.|++|+..+... .++.+..++..+|++.++++++++++|++|..||..|++
T Consensus        47 ~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~  123 (396)
T 1xpm_A           47 VNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD  123 (396)
T ss_dssp             TTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCC-CCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHH
Confidence            4678899999999999988  7889999999998765432 457899999999996458999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeecc
Q 017289          150 AIKAGLYDIGIAAGLES  166 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~  166 (374)
                      .|++|.++.|||+|+|.
T Consensus       124 ~I~sg~~~~vLvvg~e~  140 (396)
T 1xpm_A          124 YLATRPNEKVLVIATDT  140 (396)
T ss_dssp             HHTTCTTCEEEEEEEEE
T ss_pred             HHHcCCCCEEEEEeehh
Confidence            99999999999999996

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=99.52  E-value=1.3e-13  Score=135.47  Aligned_cols=95  Identities=15%  Similarity=0.063  Sum_probs=85.0

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC-ceeecccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      +..+|+.+|+++||+++|+++++||.|++++..+ . ..+..+..++..+|++...+ ++.++.+|+++..+|..|...|
T Consensus       101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~-~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i  178 (393)
T 3ov2_A          101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-I-DMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLA  178 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-C-CBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-C-CCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998776 2 35678999999999974332 7999999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|.++.|||+|+|.++.
T Consensus       179 ~sg~~~~vLvvg~E~~s~  196 (393)
T 3ov2_A          179 ENNRGARVLVVACEITVL  196 (393)
T ss_dssp             HHSTTCEEEEEEEECGGG
T ss_pred             HcCCCCEEEEEEEeccch
Confidence            999999999999999863

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=99.52  E-value=7.5e-14  Score=136.78  Aligned_cols=94  Identities=14%  Similarity=0.009  Sum_probs=84.5

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC-ceeecccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      +..+|+.+|+++||+++|+++++||.|++++..+ . ..+..+..++..+|++...+ ++.++.+|+++..+|..|...|
T Consensus        95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~-~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i  172 (387)
T 3oit_A           95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-A-HVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA  172 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-C-EESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-C-CcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998766 2 25678899999999974332 7899999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCC
Q 017289          152 KAGLYDIGIAAGLESMT  168 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s  168 (374)
                      ++|.++.|||+|+|.++
T Consensus       173 ~sg~~~~vLvvg~E~~s  189 (387)
T 3oit_A          173 ENSRGARVLVVAAELTL  189 (387)
T ss_dssp             HSSTTCEEEEEEEECGG
T ss_pred             hcCCCCEEEEEEEeccc
Confidence            99999999999999986

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=99.52  E-value=1.6e-13  Score=136.99  Aligned_cols=110  Identities=11%  Similarity=0.133  Sum_probs=92.1

Q ss_pred             EEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCC--CCCCCc
Q 017289           53 IVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGF--PETVPL  130 (374)
Q Consensus        53 IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl--~~~~p~  130 (374)
                      +.|.|.+.+...    ..+.+..+|+.+|+++||+++|+++++||.|++|+..+... .+..+..++..+|+  +.++++
T Consensus        35 ~~g~G~~~~~~~----~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~-~p~~a~~v~~~lgl~g~~~~~~  109 (450)
T 2f82_A           35 TIGLGQDCLAFC----TELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDK-SKSIKTFLMQLFEKCGNTDVEG  109 (450)
T ss_dssp             TTTSCCCEEECC----CTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCS-SSCHHHHHTHHHHTTTCCCCBC
T ss_pred             hhhhCceeeeeC----CCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCC-CCcHHHHHHHHhCCcCCCCceE
Confidence            345555544321    24678999999999999999999999999999998765432 46788999999998  346899


Q ss_pred             eeecccCchHHHHHHHHHHHHHcCCC--CEEEEEeeccC
Q 017289          131 RTVNRQCSSGLQAVADVATAIKAGLY--DIGIAAGLESM  167 (374)
Q Consensus       131 ~~v~~acaSg~~ai~~Aa~~I~sG~~--d~vLv~G~E~~  167 (374)
                      +.++++|++|..+|..|.+.|++|.+  +.|||+|+|.+
T Consensus       110 ~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~  148 (450)
T 2f82_A          110 VDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSA  148 (450)
T ss_dssp             CEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEE
T ss_pred             EEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeec
Confidence            99999999999999999999999998  99999999975

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=99.50  E-value=1.9e-13  Score=133.92  Aligned_cols=96  Identities=9%  Similarity=-0.039  Sum_probs=85.0

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC-ceeecccCchHHHHHHHHHHH
Q 017289           72 TLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATA  150 (374)
Q Consensus        72 ~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~v~~acaSg~~ai~~Aa~~  150 (374)
                      .+..+|+.+|+++||+++|+++++||.|++++..+.  ..++.+..++..+|++...+ +++++.+|+++..+|..|++.
T Consensus        96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~--~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~  173 (387)
T 3a5r_A           96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGV--DMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDI  173 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC--EESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC--CCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHH
Confidence            366899999999999999999999999999987642  24567899999999964343 889999999999999999999


Q ss_pred             HHcCCCCEEEEEeeccCCC
Q 017289          151 IKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       151 I~sG~~d~vLv~G~E~~s~  169 (374)
                      |++|.++.|||+|+|.++.
T Consensus       174 i~~g~~~~vLvvg~e~~s~  192 (387)
T 3a5r_A          174 AENNKGARVLIVCSEMTTT  192 (387)
T ss_dssp             HHHSTTCEEEEEEEECCTT
T ss_pred             HHhCCCCEEEEEEEeccch
Confidence            9999999999999999865

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=99.50  E-value=3.2e-13  Score=133.10  Aligned_cols=95  Identities=12%  Similarity=0.088  Sum_probs=86.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceee-cccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v-~~acaSg~~ai~~Aa~~I  151 (374)
                      +..+|+.+|+++||+++|+++++||.|++++..+.  ..+..+..++..+|++..++.+.+ +.+|++|..++..|+..|
T Consensus       136 ~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~--~~P~~a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i  213 (413)
T 3v7i_A          136 AVQAYGERAARGALQIAGLDVADVDCLITSNSTTP--ALPGLDVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLV  213 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC--CSSCHHHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC--CcCHHHHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999987763  256789999999999755778888 999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|.++.|||+|+|++|.
T Consensus       214 ~ag~~~~vLvvg~E~~S~  231 (413)
T 3v7i_A          214 AADPDRVVLVVISEALST  231 (413)
T ss_dssp             HHCTTCEEEEEEEECGGG
T ss_pred             hcCCCCEEEEEEEecccc
Confidence            999999999999999875

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=99.49  E-value=2e-13  Score=136.46  Aligned_cols=92  Identities=20%  Similarity=0.164  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC-ceee-cccCchHHHHHHHHHHHHH
Q 017289           75 DDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTV-NRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        75 ~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~v-~~acaSg~~ai~~Aa~~I~  152 (374)
                      .+|+.+|+++||+++|+++++||.|++++..+ . ..+..+..++..+|++ +.+ ++.+ +.+|+++..+|..|...|+
T Consensus       111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t~-~-~~P~~a~~v~~~LGl~-~~~~~~dv~~~~Csgg~~AL~~A~~~i~  187 (465)
T 3e1h_A          111 VPLAVEASRKAMAEARLVPAQITHMVSTTCTD-S-ANPGYDHYVAKELGLS-DRLEKVLLHGIGCSGGLAALRTAANLCL  187 (465)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCCEEEEECSSC-C-CSSCHHHHHHHHHTCC-TTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-C-CCCcHHHHHHHHhCCC-CCeeEEEecCCcchHHHHHHHHHHHHHh
Confidence            48999999999999999999999999998763 2 2567899999999997 445 7888 7999999999999999999


Q ss_pred             c----CCCCEEEEEeeccCCC
Q 017289          153 A----GLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 s----G~~d~vLv~G~E~~s~  169 (374)
                      +    |.++.|||+|+|.++.
T Consensus       188 a~~~~G~~~~vLVvg~E~~S~  208 (465)
T 3e1h_A          188 GHTARGKPARILVLALEVSTT  208 (465)
T ss_dssp             HHHHTTCCCEEEEEEEECCGG
T ss_pred             cccccCCCCEEEEEEEeecch
Confidence            7    9999999999999765

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=99.47  E-value=9.2e-14  Score=136.11  Aligned_cols=97  Identities=7%  Similarity=0.000  Sum_probs=86.7

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|  +++||.|++++..+... .+..+..++..+|++..++++.++.+|++|..+|..|..
T Consensus        52 ~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~-~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~  128 (388)
T 3v4n_A           52 ISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDE-SKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKN  128 (388)
T ss_dssp             TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCc-CccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHH
Confidence            457899999999999999997  89999999998766542 457899999999997458999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.|||+|+|.++.
T Consensus       129 ~i~sg~~~~vLVvg~e~~s~  148 (388)
T 3v4n_A          129 HVALHPDKKVLVVAADIAKY  148 (388)
T ss_dssp             HHHHCTTCEEEEEEEEEECC
T ss_pred             HHhcCCCCEEEEEEehhhcc
Confidence            99999999999999998754

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=99.36  E-value=2.8e-12  Score=122.52  Aligned_cols=94  Identities=22%  Similarity=0.227  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHHHHHc
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKA  153 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~s  153 (374)
                      ..+|+.+|+++||+++|+++++||.|++++..+... .++.+..++..+|++ ++|+++++.+|+++..++..|+..|++
T Consensus        52 ~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~-~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~  129 (321)
T 3il6_A           52 TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFN-MPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLS  129 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCS-SSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcC-CCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHC
Confidence            889999999999999999999999999998765443 467899999999997 589999999999999999999999999


Q ss_pred             CCCCEEEEEeeccCCC
Q 017289          154 GLYDIGIAAGLESMTV  169 (374)
Q Consensus       154 G~~d~vLv~G~E~~s~  169 (374)
                      |.++.+||+|+|+++.
T Consensus       130 g~~~~vLvvg~e~~s~  145 (321)
T 3il6_A          130 GRYQTGLVIGGETFSK  145 (321)
T ss_dssp             SSCCCEEEEEEECGGG
T ss_pred             CCCCEEEEEEEccccc
Confidence            9999999999999875

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=99.25  E-value=2.1e-11  Score=120.45  Aligned_cols=95  Identities=12%  Similarity=0.057  Sum_probs=84.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC-ceeecccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP-LRTVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~v~~acaSg~~ai~~Aa~~I  151 (374)
                      +..+|+.+|+++||+++|+++++||.|++++..+.  ..++.+..++..+|++...+ +++++.+|+++..+|..|+..|
T Consensus       124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~--~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i  201 (413)
T 1xes_A          124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP--DLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLA  201 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCC--EESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCC--ccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHH
Confidence            56799999999999999999999999999987652  24567899999999964343 8999999999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|.++.|||+|+|.++.
T Consensus       202 ~~G~~~~vLvvg~E~~s~  219 (413)
T 1xes_A          202 ENNRGARVLVICSETTAV  219 (413)
T ss_dssp             HTSTTCCEEEEEEECTTT
T ss_pred             HcCCCCEEEEEEehhhhh
Confidence            999999999999999875

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=99.13  E-value=1.4e-10  Score=116.47  Aligned_cols=111  Identities=13%  Similarity=0.084  Sum_probs=92.2

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHH---HHcCCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAA---FYAGFPE  126 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va---~~~Gl~~  126 (374)
                      ..++.|.|.+.+...    ..+.+..+|+.+|+++||+++|+++++||.|++++..+... .+..+..++   ..+|++ 
T Consensus        53 ~~~~~~~Gi~~r~~~----~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~-~ps~a~~v~~~L~~lG~~-  126 (478)
T 2p8u_A           53 GKYTIGLGQAKMGFC----TDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDK-SKSVKTNLMQLFEESGNT-  126 (478)
T ss_dssp             TCCCCCCCCCEEECC----CTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTTTTTCC-
T ss_pred             hHhecccCceEEEeC----CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCccc-CccHHHHHHHHHhhcCCC-
Confidence            455677777776532    24678999999999999999999999999999998765432 355677777   445564 


Q ss_pred             CCCceeecccCchHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q 017289          127 TVPLRTVNRQCSSGLQAVADVATAIKAGL--YDIGIAAGLES  166 (374)
Q Consensus       127 ~~p~~~v~~acaSg~~ai~~Aa~~I~sG~--~d~vLv~G~E~  166 (374)
                      +++++.++.+|++|..+|..|...|++|.  .+.|||+|+|.
T Consensus       127 ~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei  168 (478)
T 2p8u_A          127 DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI  168 (478)
T ss_dssp             CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred             CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence            78999999999999999999999999999  99999999995

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=98.96  E-value=1.4e-09  Score=108.66  Aligned_cols=94  Identities=15%  Similarity=0.120  Sum_probs=78.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCC--CCCCceeecccCchHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP--ETVPLRTVNRQCSSGLQAVADV  147 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~--~~~p~~~v~~acaSg~~ai~~A  147 (374)
                      .+.+..+|+++|+++||+++|+++++||.|++++..+... .+..+..+...+|+.  .+++++.++.+|.++..|+..|
T Consensus        50 ~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~-~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A  128 (460)
T 2wya_A           50 VQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDK-SKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNA  128 (460)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCS-SSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHH
Confidence            4678899999999999999999999999999998765543 456777888888652  3567899999999999999999


Q ss_pred             HHHHHcCCCCEEEEEee
Q 017289          148 ATAIKAGLYDIGIAAGL  164 (374)
Q Consensus       148 a~~I~sG~~d~vLv~G~  164 (374)
                      ...|++|..+.++++.+
T Consensus       129 ~~~i~~g~~~~~lvvv~  145 (460)
T 2wya_A          129 ANWMESSSWDGRYAMVV  145 (460)
T ss_dssp             HHHHTSTTCCSCEEEEE
T ss_pred             HHHHHhccccceEEEEE
Confidence            99999998876555433

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=93.50  E-value=0.19  Score=47.64  Aligned_cols=90  Identities=13%  Similarity=0.134  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCC--------------CceeecccCch-H
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETV--------------PLRTVNRQCSS-G  140 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~--------------p~~~v~~acaS-g  140 (374)
                      -.+.+++++.|+|+|++++|+|.|+.|....-   +..+...+...+|++.+.              +.+.-..+|+. .
T Consensus       207 PaA~~ti~~~l~d~g~~~~d~D~ivtgdL~q~---g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa  283 (347)
T 3lma_A          207 PAAADTIKQHLEDLGRTPDDYDLILTGDLSGV---GSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSA  283 (347)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEEESCHHH---HHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHcCEEecCChHHH---HHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHH
Confidence            35667779999999999999999997643211   223566677788886311              11122234543 3


Q ss_pred             HHHHHHHHHHHHcCCCCEEEEEeeccCC
Q 017289          141 LQAVADVATAIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       141 ~~ai~~Aa~~I~sG~~d~vLv~G~E~~s  168 (374)
                      ......-...++.|+.+.||++++-..-
T Consensus       284 ~v~~~~~~~~~~~g~~~ril~~~tGall  311 (347)
T 3lma_A          284 VVTFAHIFKEIEAGRLNRVLVVATGALL  311 (347)
T ss_dssp             HHHHHTHHHHHHTTSCSEEEEEEEEECC
T ss_pred             HHHHHHHHHHHhcCcccEEEEEeccccc
Confidence            4445566778999999999999886643

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=90.03  E-value=0.87  Score=43.35  Aligned_cols=84  Identities=7%  Similarity=-0.074  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH-HHHHcC
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAG  154 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa-~~I~sG  154 (374)
                      +...++++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-..++..-+.++...+-.+. ..++.|
T Consensus       266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~------n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~~~~g  339 (365)
T 3gwa_A          266 AEVPRAADRLLALAGEPRENIDCFVLHQA------NRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETMRANG  339 (365)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHHHHcC
Confidence            45567889999999999999999886432      22345677888999754443444444444433333332 345555


Q ss_pred             C---CCEEEEEeec
Q 017289          155 L---YDIGIAAGLE  165 (374)
Q Consensus       155 ~---~d~vLv~G~E  165 (374)
                      .   -|.+|..|+-
T Consensus       340 ~~~~Gd~vll~~fG  353 (365)
T 3gwa_A          340 TLARGMRLMLLGFG  353 (365)
T ss_dssp             CCCTTCEEEEEEEE
T ss_pred             CCCCCCEEEEEEEe
Confidence            4   3678877763

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=88.62  E-value=1.1  Score=42.02  Aligned_cols=84  Identities=14%  Similarity=0.196  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH-HHHHcC
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAG  154 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa-~~I~sG  154 (374)
                      +...++++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-..++..-+.++...+-.+. ..++.|
T Consensus       234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~------~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~~~~g  307 (333)
T 4dfe_A          234 NVLEKVAVEALEKANLSAEQIDWLIPHQA------NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVAVRDG  307 (333)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHHHHcC
Confidence            45667889999999999999998876322      12345667888999754333333333333333332222 234455


Q ss_pred             C---CCEEEEEeec
Q 017289          155 L---YDIGIAAGLE  165 (374)
Q Consensus       155 ~---~d~vLv~G~E  165 (374)
                      +   -|.+|+.|+-
T Consensus       308 ~~~~Gd~vll~~~G  321 (333)
T 4dfe_A          308 RIKRGQNVLIEGVG  321 (333)
T ss_dssp             CSCTTCEEEEEEEE
T ss_pred             CCCCCCEEEEEEEc
Confidence            4   3677777653

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=88.32  E-value=1.1  Score=41.27  Aligned_cols=80  Identities=15%  Similarity=0.120  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce----eecccCchHHHHHHHHHHHHH
Q 017289           77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR----TVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~----~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      -..++++++|+++|++++|||.++.-..      +......+...+|++.+....    .-+..++++..++..+   ++
T Consensus       213 ~~~~~i~~al~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~  283 (313)
T 1zow_A          213 IMGDASTRVVEKANLTSDDIDLFIPHQA------NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LK  283 (313)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HH
Confidence            4567899999999999999998876422      122334566778886322222    2345566666666554   44


Q ss_pred             cCC---CCEEEEEeec
Q 017289          153 AGL---YDIGIAAGLE  165 (374)
Q Consensus       153 sG~---~d~vLv~G~E  165 (374)
                      .|+   -|.+|+.|+.
T Consensus       284 ~~~~~~g~~vl~~~~G  299 (313)
T 1zow_A          284 NGKLKDDDTIVLVGFG  299 (313)
T ss_dssp             TTCCCTTCEEEEEEEE
T ss_pred             cCCCCCCCEEEEEEEc
Confidence            454   3788877764

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=88.28  E-value=0.92  Score=42.30  Aligned_cols=82  Identities=13%  Similarity=0.135  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee----ecccCchHHHHHHHHHHHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT----VNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~----v~~acaSg~~ai~~Aa~~I  151 (374)
                      +...++++++|+++|++++|||.++.-..      +...-..+...+|++.+....+    -++.++|...++..+   +
T Consensus       224 ~~~~~~i~~aL~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~  294 (331)
T 2x3e_A          224 TQMSDSVRRVLDRVGWQASDLHHLVPHQA------NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L  294 (331)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence            45677899999999999999999877432      1223455778889864332222    244455555555443   4


Q ss_pred             HcCC---CCEEEEEeecc
Q 017289          152 KAGL---YDIGIAAGLES  166 (374)
Q Consensus       152 ~sG~---~d~vLv~G~E~  166 (374)
                      +.|+   -|.+|+.|+..
T Consensus       295 ~~~~~~~G~~vll~~~G~  312 (331)
T 2x3e_A          295 RQGILRDGGNMVLTGFGA  312 (331)
T ss_dssp             HTTCSCTTCEEEEEEEET
T ss_pred             HhCCCCCCCEEEEEEEeH
Confidence            5553   36888877653

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=87.82  E-value=1.2  Score=41.61  Aligned_cols=84  Identities=12%  Similarity=0.090  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH-HHHHcC
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAG  154 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa-~~I~sG  154 (374)
                      +...++++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-..++..-+.++...+-.+. ..++.|
T Consensus       224 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~------~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g  297 (323)
T 3il3_A          224 RELSNVVEETLLANNLDKKDLDWLVPHQA------NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEAIRDG  297 (323)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTCCEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHHHHcC
Confidence            34567788999999999999998876432      12344677889999754433344333333333332222 234455


Q ss_pred             C---CCEEEEEeec
Q 017289          155 L---YDIGIAAGLE  165 (374)
Q Consensus       155 ~---~d~vLv~G~E  165 (374)
                      +   -|.+|..|+-
T Consensus       298 ~~~~Gd~vll~~~G  311 (323)
T 3il3_A          298 RIQRGQLLLLEAFG  311 (323)
T ss_dssp             SSCTTCEEEEEEEE
T ss_pred             CCCCCCEEEEEEEe
Confidence            4   3678777653

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=87.43  E-value=1.4  Score=40.64  Aligned_cols=80  Identities=14%  Similarity=0.102  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce----eecccCchHHHHHHHHHHHHH
Q 017289           77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR----TVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~----~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      -..++++++|+++|++++|||.++.-..      +......+...+|++......    .-++.++|...++..+   ++
T Consensus       219 ~~~~~i~~aL~~agl~~~did~v~~H~~------~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~---~~  289 (317)
T 1hnj_A          219 ELAHIVDETLAANNLDRSQLDWLVPHQA------NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---VR  289 (317)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---HH
Confidence            4567899999999999999998877432      222345677888986322111    2345556666666544   44


Q ss_pred             cCC---CCEEEEEeec
Q 017289          153 AGL---YDIGIAAGLE  165 (374)
Q Consensus       153 sG~---~d~vLv~G~E  165 (374)
                      .|.   -|.+|+.|+.
T Consensus       290 ~~~~~~G~~vll~~~G  305 (317)
T 1hnj_A          290 DGRIKPGQLVLLEAFG  305 (317)
T ss_dssp             TTCSCTTCEEEEEEEE
T ss_pred             hCCCCCCCEEEEEEEc
Confidence            453   3788887764

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=87.31  E-value=1.2  Score=41.97  Aligned_cols=82  Identities=16%  Similarity=0.081  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceee----cccCchHHHHHHHHHHH--
Q 017289           77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV----NRQCSSGLQAVADVATA--  150 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v----~~acaSg~~ai~~Aa~~--  150 (374)
                      ...++++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-..++    |+.++|-..++..+.+.  
T Consensus       247 ~~~~~i~~~l~~~gl~~~did~~v~Hq~------~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~  320 (345)
T 3s21_A          247 LAQKTFVAAKQVLGWAVEELDQFVIHQV------SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR  320 (345)
T ss_dssp             HHHHHHHHHHHHHCCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCC
Confidence            4557778999999999999999887332      12344567788999754332332    34444444555544443  


Q ss_pred             HHcCCCCEEEEEeecc
Q 017289          151 IKAGLYDIGIAAGLES  166 (374)
Q Consensus       151 I~sG~~d~vLv~G~E~  166 (374)
                      ++.|  |.+|..|+..
T Consensus       321 ~~~G--d~vll~~~G~  334 (345)
T 3s21_A          321 LKKG--DRIALLGIGS  334 (345)
T ss_dssp             CCTT--CEEEEEEEET
T ss_pred             CCCC--CEEEEEEECh
Confidence            3333  7788877643

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=87.27  E-value=1.4  Score=41.15  Aligned_cols=82  Identities=17%  Similarity=0.182  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC-CCcee----ecccCchHHHHHHHHHHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET-VPLRT----VNRQCSSGLQAVADVATA  150 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~-~p~~~----v~~acaSg~~ai~~Aa~~  150 (374)
                      +...++++++|+++|++++|||.++.-..      +......+...+|++.. .....    -++.++|...++..+   
T Consensus       231 ~~~~~~i~~aL~~agl~~~did~v~~H~~------~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~---  301 (339)
T 1mzj_A          231 ADVVPAAREALEVAGLTVGDLVAFVPHQA------NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL---  301 (339)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence            45677899999999999999998877432      12234457788899643 22121    244455555555544   


Q ss_pred             HHcCC---CCEEEEEeecc
Q 017289          151 IKAGL---YDIGIAAGLES  166 (374)
Q Consensus       151 I~sG~---~d~vLv~G~E~  166 (374)
                      ++.|+   -|.+|+.|+..
T Consensus       302 ~~~g~~~~G~~vll~~~G~  320 (339)
T 1mzj_A          302 VRSGAVPGGGPALMIGFGA  320 (339)
T ss_dssp             HHHTSSCTTCEEEEEEEET
T ss_pred             HHcCCCCCCCEEEEEEEch
Confidence            44453   36888877653

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=86.86  E-value=1.5  Score=40.68  Aligned_cols=81  Identities=12%  Similarity=0.143  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce-ee----cccCchHHHHHHHHHHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR-TV----NRQCSSGLQAVADVATA  150 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~-~v----~~acaSg~~ai~~Aa~~  150 (374)
                      +...++++++|+++|++++|||.++.-..      +......+...+|++.+.+.. ++    ++.+++...++.+..  
T Consensus       232 ~~~~~~i~~al~~agl~~~dId~~~~H~~------~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~--  303 (335)
T 1u6e_A          232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQA------NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELL--  303 (335)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEECCS------CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHH--
Confidence            35567899999999999999998887432      122344567888996431221 12    344444444444433  


Q ss_pred             HHcCC---CCEEEEEeec
Q 017289          151 IKAGL---YDIGIAAGLE  165 (374)
Q Consensus       151 I~sG~---~d~vLv~G~E  165 (374)
                       ..|+   -|.+|+.|+-
T Consensus       304 -~~~~~~~g~~~l~~~~G  320 (335)
T 1u6e_A          304 -TTGAAKPGDLALLIGYG  320 (335)
T ss_dssp             -HHTSSCTTCEEEEEEEE
T ss_pred             -HcCCCCCCCEEEEEEEe
Confidence             3342   4788887763

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=85.90  E-value=1.9  Score=39.45  Aligned_cols=80  Identities=20%  Similarity=0.190  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce----eecccCchHHHHHHHHHHHHH
Q 017289           77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR----TVNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~----~v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ...++++++|+++|++++|||.++.-..      +......+...+|++......    .-+..++|+...+..+   ++
T Consensus       211 ~~~~~i~~al~~agl~~~did~~~~H~~------~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~~  281 (309)
T 2ebd_A          211 SMEEVCREVLEKAGVKPEEVSLVIPHQA------NVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---IK  281 (309)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---HH
Confidence            4567899999999999999998876432      112334567888986322111    2355666777766655   44


Q ss_pred             cCC---CCEEEEEeec
Q 017289          153 AGL---YDIGIAAGLE  165 (374)
Q Consensus       153 sG~---~d~vLv~G~E  165 (374)
                      .|+   -|.+|+.+..
T Consensus       282 ~g~~~~G~~~l~~~~G  297 (309)
T 2ebd_A          282 EGKVKRGDLILMTAMG  297 (309)
T ss_dssp             TTCCCTTCEEEEEEEE
T ss_pred             cCCCCCCCEEEEEEEc
Confidence            453   3678877653

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=84.69  E-value=1.5  Score=42.09  Aligned_cols=85  Identities=13%  Similarity=0.087  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce---eecccCchHHHHHHHHH-HHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR---TVNRQCSSGLQAVADVA-TAI  151 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~---~v~~acaSg~~ai~~Aa-~~I  151 (374)
                      +-..++++++|+++|++++|||.++.-..      +..+-..+...+|++.+....   .+..-+.++...+..+. ..+
T Consensus       287 ~~~~~~i~~aL~~agl~~~dId~~~~H~~------~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~  360 (393)
T 1ted_A          287 SGVAPVVTEMLWDNGLQISDIDLWAIHPG------GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV  360 (393)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSCEEECCS------CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHhHCCEEEECCC------cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH
Confidence            34567889999999999999998887432      123445677889997433211   12233333333333333 345


Q ss_pred             HcCCC----CEEEEEeecc
Q 017289          152 KAGLY----DIGIAAGLES  166 (374)
Q Consensus       152 ~sG~~----d~vLv~G~E~  166 (374)
                      +.|+.    |.+|+.|+..
T Consensus       361 ~~g~~~~~Gd~vll~~~G~  379 (393)
T 1ted_A          361 QQAESAKAISTGVAFAFGP  379 (393)
T ss_dssp             HSCSSSSSSEEEEEEEEET
T ss_pred             hcCccCCCCCeEEEEEecc
Confidence            66653    6888877643

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=83.67  E-value=3.1  Score=39.34  Aligned_cols=82  Identities=12%  Similarity=0.075  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee----ecccCchHHHHHHHHHHHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT----VNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~----v~~acaSg~~ai~~Aa~~I  151 (374)
                      +...++++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-...    -|+.++|-..++..+.+.+
T Consensus       254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~------n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l  327 (359)
T 3h78_A          254 QTLVRIAGEMLAAHELTLDDIDHVICHQP------NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDI  327 (359)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCC------CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhC
Confidence            44567889999999999999999876432      1234466788899975433333    3444555555666665554


Q ss_pred             HcCCCCEEEEEeec
Q 017289          152 KAGLYDIGIAAGLE  165 (374)
Q Consensus       152 ~sG~~d~vLv~G~E  165 (374)
                      +.|  |.+|..|+-
T Consensus       328 ~~G--d~vll~~fG  339 (359)
T 3h78_A          328 QPG--QRVLVLTYG  339 (359)
T ss_dssp             CTT--CEEEEEEEE
T ss_pred             CCC--CEEEEEEEc
Confidence            445  677777653

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=83.38  E-value=3.2  Score=44.62  Aligned_cols=82  Identities=10%  Similarity=-0.020  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee-------ecccCchHHHHHHHHHH
Q 017289           77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT-------VNRQCSSGLQAVADVAT  149 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~-------v~~acaSg~~ai~~Aa~  149 (374)
                      ...++++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-..+       -|+.++|-..++..+..
T Consensus       865 ~~~~~~~~al~~agl~~~did~~~~Hq~------~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~  938 (979)
T 3tsy_A          865 NVEKCLTQAFDPLGISDWNSLFWIAHPG------GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRK  938 (979)
T ss_dssp             HHHHHHHHHHGGGTCCCGGGSEEEECCS------CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCcccceEEECCC------ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHh
Confidence            3577889999999999999999776321      2234556778899975442222       45666666777888888


Q ss_pred             HHHcCCC-------CEEEEEee
Q 017289          150 AIKAGLY-------DIGIAAGL  164 (374)
Q Consensus       150 ~I~sG~~-------d~vLv~G~  164 (374)
                      .++.|+.       |.+|..|+
T Consensus       939 ~~~~G~~v~~g~~~~~~ll~~~  960 (979)
T 3tsy_A          939 KSLKGERATTGEGLDWGVLFGF  960 (979)
T ss_dssp             HHHHTTCSBTTTTCSEEEEEEE
T ss_pred             hhcccccccCCCCcceeEEEEe
Confidence            8888754       45566655

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=83.28  E-value=3.5  Score=37.96  Aligned_cols=81  Identities=19%  Similarity=0.111  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCce----eecccCchHHHHHHHHHHHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLR----TVNRQCSSGLQAVADVATAI  151 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~----~v~~acaSg~~ai~~Aa~~I  151 (374)
                      +-..++++++|+++|++++|||.++.-..      +......+...+|++.+....    .-++.++|+..++..+   +
T Consensus       220 ~~~~~~i~~al~~agl~~~did~~~~H~~------~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~~---l  290 (322)
T 1ub7_A          220 RVMNTATLEAIEKAGLTPEDIRLFVPHQA------NLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEA---V  290 (322)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCS------CHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcCC------CHHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHHH---H
Confidence            45677899999999999999998877432      112334567788886322111    2345566666666544   4


Q ss_pred             HcCC---CCEEEEEeec
Q 017289          152 KAGL---YDIGIAAGLE  165 (374)
Q Consensus       152 ~sG~---~d~vLv~G~E  165 (374)
                      +.|.   -+.+|+.++.
T Consensus       291 ~~g~~~~g~~~l~~~~G  307 (322)
T 1ub7_A          291 DAGRIREGDHVLLVSFG  307 (322)
T ss_dssp             HHTSSCTTCEEEEEEEE
T ss_pred             HhCCCCCCCEEEEEEEC
Confidence            5553   3677777653

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=82.33  E-value=3.8  Score=38.64  Aligned_cols=83  Identities=10%  Similarity=0.029  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee----ecccCchHHHHHHHHHH--
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT----VNRQCSSGLQAVADVAT--  149 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~----v~~acaSg~~ai~~Aa~--  149 (374)
                      +...++++++|+++|++++|||.++.-..      ...+-..+...+|++.+.-..+    -|+.++|-..++..+.+  
T Consensus       244 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~------~~~i~~~~~~~Lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g  317 (354)
T 4efi_A          244 NAVPKLVSRTLDIAGRDKDSYDAFLFHQA------NLFMLKHLAKKAGLPAERVPVNIGEYGNTSCASIPLLITTELKDR  317 (354)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECCC------CHHHHHHHHHHTTCCGGGSCCCHHHHCBCGGGHHHHHHHHHSHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEeCCC------CHHHHHHHHHHhCcCHHHHHHHHhhhCcHHHHHHHHHHHHHHHhC
Confidence            45667889999999999999999887432      1234566788999975433333    34444555555655543  


Q ss_pred             HHHcCCCCEEEEEeecc
Q 017289          150 AIKAGLYDIGIAAGLES  166 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~  166 (374)
                      .++.|  |.+|+.|+-.
T Consensus       318 ~~~~G--d~vll~~fG~  332 (354)
T 4efi_A          318 LKEET--LQLGMFGFGV  332 (354)
T ss_dssp             HHHSC--EEEEEEEEET
T ss_pred             CCCCC--CEEEEEEEch
Confidence            45555  6777777643

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=80.77  E-value=6.6  Score=37.58  Aligned_cols=97  Identities=12%  Similarity=0.106  Sum_probs=59.7

Q ss_pred             eEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHH-HHHHcCCCC-CC
Q 017289           51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRM-AAFYAGFPE-TV  128 (374)
Q Consensus        51 v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~-va~~~Gl~~-~~  128 (374)
                      ++|+|.+..--...    .....    ...++++||+++|++++|||.+-+=    +.   ...... ..+.+|+.. ..
T Consensus       279 a~i~g~~~~~~~p~----~~~~~----~~~a~~~al~~Agl~~~dId~ie~h----ea---fa~~~l~~~~~lg~~~~~~  343 (401)
T 1ulq_A          279 ARVRAIAVAGVPPR----IMGIG----PVPATRKALERAGLSFSDLGLIELN----EA---FAAQALAVLREWSLSMEDQ  343 (401)
T ss_dssp             EEEEEEEEEECCGG----GGGGT----HHHHHHHHHHHTTCCGGGCSEEEEC----CS---BHHHHHHHHHHHTCCTTCT
T ss_pred             EEEEEEEEecCCcc----ccchh----HHHHHHHHHHHcCCCHHHcCEEEEe----cc---hHHHHHHHHHHcCCCCCCC
Confidence            88999887643211    01112    2678999999999999999987652    11   111111 123467611 11


Q ss_pred             Cce-------eecccCchHHHHHHHHHHHHHcCCCCEEEEE
Q 017289          129 PLR-------TVNRQCSSGLQAVADVATAIKAGLYDIGIAA  162 (374)
Q Consensus       129 p~~-------~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~  162 (374)
                      |.-       .-...+++|...+..++..++.+..+..|+.
T Consensus       344 ~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~~~~gl~~  384 (401)
T 1ulq_A          344 RLNPNGGAIALGHPLGASGARILTTLVHEMRRRKVQFGLAT  384 (401)
T ss_dssp             TBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             ccCCCCcccccCCCcchHHHHHHHHHHHHHhhcCCCEEEEE
Confidence            211       1223456788889999999999888888765

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=80.56  E-value=3.9  Score=39.08  Aligned_cols=97  Identities=12%  Similarity=0.102  Sum_probs=60.7

Q ss_pred             eEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCc
Q 017289           51 VVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL  130 (374)
Q Consensus        51 v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~  130 (374)
                      ..|.|.+.......    .....    ...+++++|+++|++++|||.+.+....      ......+...+|++. .|.
T Consensus       277 a~i~g~~~~~~~p~----~~~~~----~~~ai~~al~~agl~~~dId~ve~~d~f------a~~~~~~~~~lg~~~-~~v  341 (395)
T 4e1l_A          277 AKIKSYASAGVEPE----VMGTG----PIPATRKALKKAGLSINDIDLIEANEAF------AAQALAVKNELQIDS-SKL  341 (395)
T ss_dssp             EEEEEEEEEECCGG----GTTCT----HHHHHHHHHHHTTCCGGGCSEEEECCSB------HHHHHHHHHHHTCCG-GGB
T ss_pred             EEEEEEEEccCCCC----cchHH----HHHHHHHHHHHcCCCHHHcCEEEecChh------HHHHHHHHHHhCCCC-CCC
Confidence            47888776433211    11122    2567899999999999999999864221      112334456778752 221


Q ss_pred             e-------eecccCchHHHHHHHHHHHHHcCCCCEEEEE
Q 017289          131 R-------TVNRQCSSGLQAVADVATAIKAGLYDIGIAA  162 (374)
Q Consensus       131 ~-------~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~  162 (374)
                      .       .-...++||...+..++..++....+..|+.
T Consensus       342 ~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~~~~~gl~~  380 (395)
T 4e1l_A          342 NVNGGAIALGHPIGASGARILVTLIYEMQKRKVETGLAT  380 (395)
T ss_dssp             STTCCHHHHCCCTTTHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred             CcCCchhhcCCcHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            1       1133467888889999999887666766653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	374
d1m3ka1	268	c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea	5e-65
d1ulqa1	273	c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T	1e-60
d1afwa1	269	c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch	3e-54
d1wdkc1	262	c.95.1.1 (C:2-263) Fatty oxidation complex beta su	2e-50
d1afwa2	124	c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Sacc	6e-10
d1m3ka2	124	c.95.1.1 (A:269-392) Biosynthetic thiolase {Zooglo	1e-08
d1wdkc2	128	c.95.1.1 (C:264-391) Fatty oxidation complex beta	2e-07
d1ulqa2	125	c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase	1e-06

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score =  205 bits (523), Expect = 5e-65
 Identities = 100/274 (36%), Positives = 146/274 (53%), Gaps = 18/274 (6%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPG 108
             +VI +A RTA+     G F +T A +L A V+ AV+E+  +   EV ++++G VL  G
Sbjct: 3   PSIVIASAARTAVGSFN-GAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAG 61

Query: 109 STRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT 168
                  R AA  AG P+      +N+   SGL+AVA     I  G   I +A G+ESM+
Sbjct: 62  EG-QNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120

Query: 169 VNSISVVGQVNPKVEIFTQARDCL----------LPMGITSENVAQRFGVTRQEQDLAAV 218
           +       +   K+  F      +            MG T+ENVA+++ ++R EQD  AV
Sbjct: 121 MAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAV 180

Query: 219 ESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPA 278
            S  +A AA   G+FKDEI+P   K      G +  +T+  D+ IR   T+  +AKL+PA
Sbjct: 181 ASQNKAEAAQKDGRFKDEIVPFIVK------GRKGDITVDADEYIRHGATLDSMAKLRPA 234

Query: 279 FKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG 312
           F K+GT TAGNAS ++DGA A LLM  + A ++G
Sbjct: 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG 268

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score =  194 bits (494), Expect = 1e-60
 Identities = 103/280 (36%), Positives = 143/280 (51%), Gaps = 23/280 (8%)

Query: 50  DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGS 109
           +  IV A RT I K   G       DDLLA  L  +++++ +   EV D+  G     G 
Sbjct: 1   EAWIVEAVRTPIGKHG-GALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 59

Query: 110 TRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV 169
                 RMA   AGFP  V   TVNR C SGL+AVA  A AI AG   + I +G+ESM+ 
Sbjct: 60  DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 119

Query: 170 NSISVVGQVNPK----------------VEIFTQARDCLLPMGITSENVAQRFGVTRQEQ 213
              +V                       V    QA      MG T+EN+A+ +G+ R+EQ
Sbjct: 120 APYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQ 179

Query: 214 DLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA 273
           D  A+ SH++A  A   G+F+DE++PV  K    +  VE+      D+G R +T++  LA
Sbjct: 180 DRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQ------DEGPRRDTSLEKLA 233

Query: 274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL 313
            L+P F++ GT TAGN+S ++DGA AVLL+    A   GL
Sbjct: 234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL 273

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  178 bits (451), Expect = 3e-54
 Identities = 115/268 (42%), Positives = 156/268 (58%), Gaps = 18/268 (6%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK----TRLNPSEVGDIVVGTV 104
           +DVVIVAA R+AI K  +G FKD   D LL   L   I +     R + + + ++  G V
Sbjct: 10  EDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNV 69

Query: 105 LAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGL 164
           L      A E R A   +G P + P   +NRQCSSGL AV D+A  IK G  DIG+A G+
Sbjct: 70  L-NVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGV 128

Query: 165 ESMTVNSISVV---GQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESH 221
           ESMT N  +V       + +++   +A+ CL+PMGIT+ENVA  F ++R++QD  A  S+
Sbjct: 129 ESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSY 188

Query: 222 RRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK 281
           ++A  A   G F+DEI+P+          +        D+G RPN T   L+ ++PAF K
Sbjct: 189 QKAYKAKNEGLFEDEILPIK---------LPDGSICQSDEGPRPNVTAESLSSIRPAFIK 239

Query: 282 D-GTTTAGNASQVSDGAGAVLLMKRSLA 308
           D GTTTAGNASQVSDG   VLL +RS+A
Sbjct: 240 DRGTTTAGNASQVSDGVAGVLLARRSVA 267

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

 Score =  167 bits (424), Expect = 2e-50
 Identities = 94/262 (35%), Positives = 144/262 (54%), Gaps = 9/262 (3%)

Query: 49  DDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAP 107
            DVVIV   RT + ++K G  ++T A+D+ A ++  V+E+ ++++P EV D++ G V   
Sbjct: 5   RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQT 64

Query: 108 GSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESM 167
                   RMA+     P T   +TV+R C S + A+   A AI  G  D+ +  G+E M
Sbjct: 65  LEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124

Query: 168 TVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDLAAVESHRRAAAA 227
               +S++  V+P   +   A      MG+T+E + +  G++R++QD  AV SH+ A  A
Sbjct: 125 GH--VSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKA 182

Query: 228 TASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFK-KDGTTT 286
           T  GKFKDEIIP+     +             D+ IRP+TT+  LA LKPAF  K GT T
Sbjct: 183 TVEGKFKDEIIPMQGYDENGFL-----KIFDYDETIRPDTTLESLAALKPAFNPKGGTVT 237

Query: 287 AGNASQVSDGAGAVLLMKRSLA 308
           AG +SQ++DGA  +++M    A
Sbjct: 238 AGTSSQITDGASCMIVMSAQRA 259

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.5 bits (131), Expect = 6e-10
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query: 312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
            LP+LG +  F  VGV P +MG+GPA AIP  +++ GLQ+ DI++FEINE         I
Sbjct: 2   NLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCI 61

Query: 372 M 372
            
Sbjct: 62  H 62

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 124

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score = 50.7 bits (121), Expect = 1e-08
 Identities = 24/55 (43%), Positives = 31/55 (56%)

Query: 316 LGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAAN 370
           LG   S++ VGVDP VMG GP  A   A++ AG +I D++L E NE       A 
Sbjct: 4   LGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAV 58

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 128

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 25/61 (40%), Positives = 33/61 (54%)

Query: 312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
           GL  L V RS +  GVDP++MG GP  A   A+K AGL + DI+  E+NE         +
Sbjct: 1   GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL 60

Query: 372 M 372
            
Sbjct: 61  K 61

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 125

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 316 LGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI 371
           L   R+ +  GV P +MGIGP  A   A++ AGL   D+ L E+NE       A +
Sbjct: 3   LARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVL 58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	374
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	100.0
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	100.0
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	100.0
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	100.0
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	99.54
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	99.53
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	99.49
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	99.43
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	99.42
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	99.33
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	99.31
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	99.25
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.25
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.24
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	99.24
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.23
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	99.22
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	99.19
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	99.19
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	99.14
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	99.06
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	99.05
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	98.93
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	98.75
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	98.74
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	98.67
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	97.04
d1ox0a2	158	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	97.01
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	96.93
d2gfva2	161	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	96.77
d2ix4a2	161	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	96.57
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	94.93
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	94.4
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	93.51
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	92.38
d2vbaa2	151	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	87.54

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=7.6e-50  Score=369.83  Aligned_cols=258  Identities=36%  Similarity=0.484  Sum_probs=227.5

Q ss_pred             CCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHH-cCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCC
Q 017289           47 FDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEK-TRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFP  125 (374)
Q Consensus        47 ~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~d-AGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~  125 (374)
                      .+++|||||+.||||+|.++|.+++.++.||+.++++++|++ +|+++++||.|++|++.+...++.|++|.+++..|++
T Consensus         3 n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p   82 (262)
T d1wdkc1           3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP   82 (262)
T ss_dssp             CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred             CCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcc
Confidence            468999999999999986567889999999999999999996 8999999999999999877655789999999999999


Q ss_pred             CCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcCChhhhhhcccccCCCchHHHHHHHHHH
Q 017289          126 ETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQR  205 (374)
Q Consensus       126 ~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~  205 (374)
                      ..+|+++|++.|+||+++|..|++.|++|++|++|++|+|+||+.|+..+......+.  .........||+++++++++
T Consensus        83 ~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p~~~~~~~~~~~~--~~~~~~~~~mg~tae~~a~~  160 (262)
T d1wdkc1          83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMS--LYAAKASGMMGLTAEMLGKM  160 (262)
T ss_dssp             TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGG--GTSCGGGGSHHHHHHHHHHH
T ss_pred             cccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccccccccccccccccc--ccccccccchhhhHHHHHHH
Confidence            8999999999999999999999999999999999999999999998754332211111  11122234699999999999


Q ss_pred             hCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCCcccC-CCc
Q 017289          206 FGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKK-DGT  284 (374)
Q Consensus       206 ~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~pi~~~-~~~  284 (374)
                      ||++||++|+|+..||+++.++..+|+|++||+|++++..+.     ...+++.||.+|+++|+|.|.+++|+|.+ +|.
T Consensus       161 ~gisRe~~D~~a~~S~~ra~~A~~~G~f~~ei~pv~~~~~~~-----~~~~~~~De~~R~~tt~E~La~LkP~f~~~~Gt  235 (262)
T d1wdkc1         161 HGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENG-----FLKIFDYDETIRPDTTLESLAALKPAFNPKGGT  235 (262)
T ss_dssp             HTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTC-----CEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCC
T ss_pred             hccccccchhhhhhhhhhhhhHhhcCCcceeeeeeccccccc-----cccccccccCCCCCCCHHHHcCCCCcccCCCCc
Confidence            999999999999999999999999999999999998774332     23468899999999999999999999975 699


Q ss_pred             cccCCCCCcCCcceeEEEcCHHHHHHc
Q 017289          285 TTAGNASQVSDGAGAVLLMKRSLAVQK  311 (374)
Q Consensus       285 lt~~~~~~~~DGAaAvVL~s~~~A~~~  311 (374)
                      +|.+|||+++|||+|+||+|+++|++|
T Consensus       236 vTagnsS~isDGAAavll~se~~akeL  262 (262)
T d1wdkc1         236 VTAGTSSQITDGASCMIVMSAQRAKDL  262 (262)
T ss_dssp             CCGGGBCCCEEEEEEEEEEEHHHHHHT
T ss_pred             CcchhhChHHHHHHHHHHhCHHHHhcC
Confidence            999999999999999999999999985

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=100.00  E-value=8e-50  Score=371.08  Aligned_cols=257  Identities=38%  Similarity=0.510  Sum_probs=228.6

Q ss_pred             CCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCC
Q 017289           48 DDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPET  127 (374)
Q Consensus        48 ~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~  127 (374)
                      ..+||||++.||||+| ++|.+++.++.+|+..+++++|+++||++++||.|++|++.+.+. +.|++|.+++..|++..
T Consensus         2 ~~~V~Iv~~~RTP~g~-~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~-~~n~ar~~al~aglp~~   79 (268)
T d1m3ka1           2 TPSIVIASAARTAVGS-FNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGE-GQNPARQAAMKAGVPQE   79 (268)
T ss_dssp             CCCEEEEEEEECCCEE-TTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTS-CSCHHHHHHHHTTCCTT
T ss_pred             CCCEEEEeceeCcccC-CCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCc-chHHHhHHHHHhCCccc
Confidence            3579999999999998 689999999999999999999999999999999999999987664 78999999999999988


Q ss_pred             CCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCcC-----C-----hhhhhhcccccCCCchHH
Q 017289          128 VPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQV-----N-----PKVEIFTQARDCLLPMGI  197 (374)
Q Consensus       128 ~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~~~  197 (374)
                      +|+++|++.|+||+++|..|++.|++|++|++|++|+|+||..|+.+....     +     ..+.+..........|+.
T Consensus        80 vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~Mg~  159 (268)
T d1m3ka1          80 ATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGT  159 (268)
T ss_dssp             SEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCSSCCSSSCEEEEEHHHHHHTBCTTTCSBHHH
T ss_pred             ccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccCchhhhcccCCcCCCcccccccccccCcCcccCCcHHH
Confidence            999999999999999999999999999999999999999999887543211     1     111111122334467999


Q ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcCCC
Q 017289          198 TSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKP  277 (374)
Q Consensus       198 ~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~~p  277 (374)
                      ++++++++||+|||++|+|++.||+++..++++|+|++||+|+.+..      .++..+++.|+.+|+++|+|.|.+++|
T Consensus       160 ~Ae~~A~~~gisRe~~D~~A~~S~~ra~~A~~~g~f~~ei~p~~~~~------~~g~~~v~~d~~~r~~tt~e~L~~L~p  233 (268)
T d1m3ka1         160 TAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKG------RKGDITVDADEYIRHGATLDSMAKLRP  233 (268)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECC------TTCCEEECSCSSCCTTCCHHHHHTCCB
T ss_pred             HHHHHHHHHCcCHHHHHHHHHHHHHHhhhHHHcCCchhhccccccCC------CCCCeEEeCCCCCCCCCCHHHHcCCCC
Confidence            99999999999999999999999999999999999999999987652      223457899999999999999999999


Q ss_pred             cccCCCccccCCCCCcCCcceeEEEcCHHHHHHcC
Q 017289          278 AFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKG  312 (374)
Q Consensus       278 i~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g  312 (374)
                      +|+++|.+|.+|||+++|||+|+||+|+++|+++|
T Consensus       234 ~f~~~GtvTagnss~~~DGAAa~ll~se~~a~~~G  268 (268)
T d1m3ka1         234 AFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRG  268 (268)
T ss_dssp             SSCTTCCCBSSSBCCCEEEEEEEEEEEHHHHHHHT
T ss_pred             CcCCCCcEEChhhChHHHHHHHHHHhhHHHHHhcC
Confidence            99999999999999999999999999999999987

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.4e-50  Score=373.86  Aligned_cols=257  Identities=39%  Similarity=0.548  Sum_probs=227.4

Q ss_pred             ceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCC
Q 017289           50 DVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVP  129 (374)
Q Consensus        50 ~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p  129 (374)
                      ++|||+..||||+| ++|.+++.++.||+..+++++|+++||++++||.|++|++.+.+.++.|++|.+++..|+|..+|
T Consensus         1 ~a~Iv~~~RTPfgk-~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp   79 (273)
T d1ulqa1           1 EAWIVEAVRTPIGK-HGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA   79 (273)
T ss_dssp             CEEEEEEEECCCEE-TTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE
T ss_pred             CEEEEccccCcccc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccc
Confidence            48999999999999 68999999999999999999999999999999999999998766556799999999999998899


Q ss_pred             ceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc-----C------Chh----hhh-hcccccCCC
Q 017289          130 LRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ-----V------NPK----VEI-FTQARDCLL  193 (374)
Q Consensus       130 ~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~-----~------~~~----~~~-~~~~~~~~~  193 (374)
                      +++|++.|+||+++|..|++.|++|.+|++|++|+|+||+.|+.....     .      +..    +.+ .........
T Consensus        80 ~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  159 (273)
T d1ulqa1          80 GCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTE  159 (273)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCC
T ss_pred             eEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhhhccccccccccCCCcccccccccccccchhhhcccccc
Confidence            999999999999999999999999999999999999999998742110     0      000    000 001112345


Q ss_pred             chHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHh
Q 017289          194 PMGITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLA  273 (374)
Q Consensus       194 ~~~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~  273 (374)
                      .|+.++++++++||+|||++|+|+++||+++..+.++|+|++||+|+.+.      ..++++.++.|+.+|+++|+|+|.
T Consensus       160 ~m~~~ae~~a~~~~itRe~~D~~a~~S~~ra~~A~~~g~f~~eivp~~~~------~~~~~~~v~~d~~~r~~tt~e~La  233 (273)
T d1ulqa1         160 SMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVK------RGKEEILVEQDEGPRRDTSLEKLA  233 (273)
T ss_dssp             CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEE------ETTEEEEECSCSCCCTTCCHHHHH
T ss_pred             chHHHHHHHHhhcCCCHHHHHHHHhhHHHHHHHHHHcCCcceeeeeeccc------cccCceEEeCCCCcCCCCCHHHHc
Confidence            79999999999999999999999999999999999999999999998654      344556789999999999999999


Q ss_pred             cCCCcccCCCccccCCCCCcCCcceeEEEcCHHHHHHcCC
Q 017289          274 KLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL  313 (374)
Q Consensus       274 ~~~pi~~~~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~  313 (374)
                      +++|+|.++|.+|.+|||+++|||+|+||+|+++|+++|+
T Consensus       234 ~L~p~f~~~G~vTagnss~~sDGAAa~vl~se~~a~~lGL  273 (273)
T d1ulqa1         234 ALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGL  273 (273)
T ss_dssp             HSCBSSSTTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTC
T ss_pred             cCCCCcCCCCcEEchhhchHHHHHHHHHHccHHHHHHcCC
Confidence            9999999999999999999999999999999999999985

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.8e-49  Score=364.52  Aligned_cols=258  Identities=45%  Similarity=0.635  Sum_probs=225.7

Q ss_pred             CCCCCCCceEEEeeecccccccCCCCCCCCCHHHHHHHHHHHHHHHc----CCCccccCeEEEEeecCCCCCcccHHHHH
Q 017289           43 RKPAFDDDVVIVAAYRTAICKAKRGGFKDTLADDLLAPVLKAVIEKT----RLNPSEVGDIVVGTVLAPGSTRAMECRMA  118 (374)
Q Consensus        43 ~m~~~~~~v~IvG~g~tpf~~~~~g~~~~~s~~eLa~~A~~~AL~dA----Gl~~~~ID~vi~g~~~~~~~~~~~~a~~v  118 (374)
                      .|+..+++|||||+.||||+|.++|.++++++.+|+..+++++|+++    |+++++||.|++|++.+.+. +.|++|++
T Consensus         4 ~~~~~~~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~-~~~~aR~~   82 (269)
T d1afwa1           4 LLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA-GATEHRAA   82 (269)
T ss_dssp             TTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG-GHHHHHHH
T ss_pred             hhhCCCCCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEecccccccc-ccccchhh
Confidence            36667889999999999999866899999999999999999999864    69999999999999887653 67999999


Q ss_pred             HHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCCCcccccCc---CChhhhhhcccccCCCch
Q 017289          119 AFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQ---VNPKVEIFTQARDCLLPM  195 (374)
Q Consensus       119 a~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~  195 (374)
                      ++..|+|..+|+++|++.|+||+++|..|++.|++|++|++|++|+|+||+.|......   ....+...........+|
T Consensus        83 al~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~M  162 (269)
T d1afwa1          83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPM  162 (269)
T ss_dssp             HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCH
T ss_pred             hhhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccccccccccccccccccchhccccccccccccc
Confidence            99999998999999999999999999999999999999999999999999877643221   111222222223345689


Q ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCcceeeeccccCCCCCcccceEEeccCCCCCCCCHHHHhcC
Q 017289          196 GITSENVAQRFGVTRQEQDLAAVESHRRAAAATASGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKL  275 (374)
Q Consensus       196 ~~~a~~~~~~~G~t~e~~~~vav~s~~~a~~~~~~g~~~~ei~p~~~~~~nP~A~~~~~~~~~~d~~~r~~~t~e~~~~~  275 (374)
                      +.++++++++||+|||++|+|++.||++|..++.+|+|++||+|+++..         ..+++.||.+|+++|+|.|.++
T Consensus       163 g~tAe~~a~~~~isRee~D~~a~~S~~rA~~A~~~g~f~~eivpv~~~~---------~~~~~~De~~R~~tt~E~La~L  233 (269)
T d1afwa1         163 GITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPD---------GSICQSDEGPRPNVTAESLSSI  233 (269)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTT---------SCEECSCSSCCSCCCHHHHHHC
T ss_pred             ccccccchhhcCccHHHHhhHHHHHHHHHHHHHhcCCcceEecceeccc---------ccEEecCCCcCCCCCHHHHcCC
Confidence            9999999999999999999999999999999999999999999997652         1268999999999999999999


Q ss_pred             CCcccC-CCccccCCCCCcCCcceeEEEcCHHHHHH
Q 017289          276 KPAFKK-DGTTTAGNASQVSDGAGAVLLMKRSLAVQ  310 (374)
Q Consensus       276 ~pi~~~-~~~lt~~~~~~~~DGAaAvVL~s~~~A~~  310 (374)
                      +|+|.+ +|.+|.+|||+++|||+|+||+|+++|+|
T Consensus       234 ~P~f~~~~G~vTagnsS~~sDGAAavll~se~~A~e  269 (269)
T d1afwa1         234 RPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQ  269 (269)
T ss_dssp             CBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHH
T ss_pred             CCccCCCCCeEcchhcChHHHHHHHHHHhhHHHhcC
Confidence            999976 49999999999999999999999999986

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=9.2e-15  Score=132.50  Aligned_cols=94  Identities=24%  Similarity=0.329  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ...++..++++||+|||+++++++    +|++|+..+...                         ....++..++..+|+
T Consensus        71 ~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl  150 (249)
T d1j3na1          71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF  150 (249)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCC
Confidence            456789999999999999987765    788886544311                         001346678999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                        .+|+++++++|+|++.||.+|++.|++|++|++||+|+|....
T Consensus       151 --~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~  193 (249)
T d1j3na1         151 --TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT  193 (249)
T ss_dssp             --CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred             --CCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhC
Confidence              5899999999999999999999999999999999999987543

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=1.4e-14  Score=131.23  Aligned_cols=94  Identities=16%  Similarity=0.157  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ...|+..++++||+|+|++.++.+    ++++|+......                         ....++..++..+|+
T Consensus        72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl  151 (250)
T d2gfva1          72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL  151 (250)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence            457889999999999999877665    577776432210                         001346778999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                        .+|+++++++|+||+.||..|++.|++|++|++||+|+|...+
T Consensus       152 --~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~  194 (250)
T d2gfva1         152 --RGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKAST  194 (250)
T ss_dssp             --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred             --CCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcC
Confidence              5899999999999999999999999999999999999986543

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.43  E-value=2.8e-13  Score=129.69  Aligned_cols=95  Identities=17%  Similarity=0.141  Sum_probs=80.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeec-ccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVN-RQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~-~acaSg~~ai~~Aa~~I  151 (374)
                      +..+|+.+|+++||+++|++++|||.||+++..+ . ..+..+.+++..+|++.....+.++ .+|+++..++..|...|
T Consensus        91 ~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~-~-~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l  168 (372)
T d1teda_          91 HAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-F-IAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYV  168 (372)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-C-CSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCC-C-CCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHH
Confidence            4568999999999999999999999999987543 2 2467789999999997545555564 58999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|..+.+||+++|..+.
T Consensus       169 ~sg~~~~~LVV~~E~~s~  186 (372)
T d1teda_         169 RAHPAMKALVVCIELCSV  186 (372)
T ss_dssp             HHSTTCEEEEEEEEECGG
T ss_pred             hcCCCccceeeeehhhcc
Confidence            999999999999997653

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=99.42  E-value=6.5e-13  Score=119.75  Aligned_cols=93  Identities=18%  Similarity=0.258  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------CcccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------TRAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------~~~~~a~~va~~~Gl  124 (374)
                      ...++.+++.+||+++|++++.+.    ++++|+..+...                         ....++..++..+|+
T Consensus        72 ~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  151 (250)
T d1e5ma1          72 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA  151 (250)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC
Confidence            356889999999999999876554    577776432210                         001246778889999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCC
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s  168 (374)
                        .+|+++++++|+||+.||..|+++|++|++|.+||+|+|...
T Consensus       152 --~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~  193 (250)
T d1e5ma1         152 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAI  193 (250)
T ss_dssp             --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             --CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhc
Confidence              589999999999999999999999999999999999999643

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=5.9e-13  Score=106.24  Aligned_cols=62  Identities=45%  Similarity=0.830  Sum_probs=59.1

Q ss_pred             cCCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhhh
Q 017289          311 KGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIM  372 (374)
Q Consensus       311 ~g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~~  372 (374)
                      +|++|+++|++|+..+.+|..++.+|..|++++|+++|++++|||+||+||+|+.+++++..
T Consensus         1 Lgl~plAri~~~a~~g~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~q~l~~~~   62 (124)
T d1afwa2           1 LNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIH   62 (124)
T ss_dssp             TTCCCCEEEEEEEEEECCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             CCCcEEEEEEEEEEEecCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhHHHHHHHH
Confidence            58899999999999999999999999999999999999999999999999999999998753

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=5.4e-12  Score=107.85  Aligned_cols=98  Identities=16%  Similarity=0.179  Sum_probs=89.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .+..+..+...+|++ +.+++.++.+|+++..++..|..
T Consensus        47 ~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~-~P~~a~~v~~~Lgl~-~~~~~di~~~C~g~~~al~~A~~  124 (174)
T d1hnja1          47 PNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHA-FPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQ  124 (174)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCS-SSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHH
T ss_pred             CCccchHHHHHHHHHhhhhcccccccccEEEEecCCcccc-ccchhhhhhhccCCC-chhhhhhhhhhccHHHHHHHHHH
Confidence            5678999999999999999999999999999998776653 567899999999996 78999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+|+++.|..|.
T Consensus       125 ~i~sg~~~~~Lvv~~e~~S~  144 (174)
T d1hnja1         125 YVKSGAVKYALVVGSDVLAR  144 (174)
T ss_dssp             HHHTTSCSEEEEEEEECHHH
T ss_pred             HHhcCCcceeEEEeeehhhc
Confidence            99999999999999997653

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=99.25  E-value=1.3e-11  Score=111.24  Aligned_cols=93  Identities=15%  Similarity=0.159  Sum_probs=72.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC-----eEEEEeecCCCC------------C--------------cccHHHHHHHHc
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG-----DIVVGTVLAPGS------------T--------------RAMECRMAAFYA  122 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID-----~vi~g~~~~~~~------------~--------------~~~~a~~va~~~  122 (374)
                      ...+...+..+|+.++++..+...     ++++|...+...            .              ...++..++..+
T Consensus        71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~  150 (253)
T d2vbaa1          71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF  150 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred             hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence            345788899999999998753221     566665433210            0              123566788899


Q ss_pred             CCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCC
Q 017289          123 GFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       123 Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s  168 (374)
                      |+  .+|.++++++|+||+.||..|++.|++|++|++||+|+|.+.
T Consensus       151 g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~  194 (253)
T d2vbaa1         151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC  194 (253)
T ss_dssp             TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             Cc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhh
Confidence            99  589999999999999999999999999999999999999654

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.25  E-value=3.6e-12  Score=102.22  Aligned_cols=60  Identities=42%  Similarity=0.705  Sum_probs=57.5

Q ss_pred             CCCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhh
Q 017289          312 GLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANI  371 (374)
Q Consensus       312 g~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~  371 (374)
                      |++|+++|++++..+.+|..++.+|..|++++|+++|++++|||+||+||+|+.+.+.++
T Consensus         1 Gl~pla~i~~~~~~g~dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA~q~l~~~   60 (128)
T d1wdkc2           1 GLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVL   60 (128)
T ss_dssp             TCCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHHHHHHHH
T ss_pred             CCCEEEEEEEEEEEecCHHHhccCcHHHHHHHhhhcCccccccceEEeecccchhhhhhh
Confidence            678999999999999999999999999999999999999999999999999999999874

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.24  E-value=3.8e-12  Score=101.41  Aligned_cols=60  Identities=40%  Similarity=0.583  Sum_probs=57.0

Q ss_pred             CCceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhhh
Q 017289          313 LPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIM  372 (374)
Q Consensus       313 ~~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~~  372 (374)
                      ++|+++|++++..+.+|..++.+|..|++++|+++|++++|||+||+||+|+.+++++..
T Consensus         1 L~Plari~~~a~~g~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~q~la~~~   60 (124)
T d1m3ka2           1 IQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNK   60 (124)
T ss_dssp             CCCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             CCcEEEEEEEEEEecChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchhheeeehH
Confidence            479999999999999999999999999999999999999999999999999999998753

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.23  E-value=4.5e-12  Score=101.08  Aligned_cols=59  Identities=36%  Similarity=0.573  Sum_probs=56.2

Q ss_pred             CceEEEEEEEEeccCCCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchhHHHHhhh
Q 017289          314 PILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVPIIAANIM  372 (374)
Q Consensus       314 ~p~a~i~g~~~~~~~p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~~~l~~~~  372 (374)
                      +|+++|++|+..+.+|..++.+|..|++++|+++|++++|||+||+||+|+.+++.++.
T Consensus         1 KPlA~i~~~~~~g~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAaq~l~~~~   59 (125)
T d1ulqa2           1 RPLARVRAIAVAGVPPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAAQALAVLR   59 (125)
T ss_dssp             CCSEEEEEEEEEECCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHHHHHHHHH
T ss_pred             CCeEEEEEEEEEecCHHHHhhccHHHHHhHhhccCcCccccchheeccccchhHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999998754

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=99.22  E-value=2.6e-11  Score=104.12  Aligned_cols=98  Identities=17%  Similarity=0.127  Sum_probs=88.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|+++++||.|++++..+... .+..+..++..+|++ +..++.++.+|+++..+|..|..
T Consensus        54 ~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~-~p~~a~~v~~~l~~~-~~~~~Dv~~~C~g~~~aL~~A~~  131 (181)
T d1mzja1          54 PDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVH-TPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAAD  131 (181)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCC-SSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHH
T ss_pred             cCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccc-cccHHHHHHHhhcCC-CccceeHHhhhccHHHHHHHHhC
Confidence            5678999999999999999999999999999988776553 466788899999986 78999999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .|++|.++.+||+++|..+.
T Consensus       132 ~i~~~~~~~~LvV~~e~~s~  151 (181)
T d1mzja1         132 AVESGGSRHVLVVATERMTD  151 (181)
T ss_dssp             HHHHSSCSCEEEEEEEEGGG
T ss_pred             HhhcCCCceeEEeeeccccc
Confidence            99999999999999998754

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=99.19  E-value=6.7e-11  Score=107.04  Aligned_cols=93  Identities=18%  Similarity=0.253  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCccc-----cCeEEEEeecCCCC-------------------------CcccHHHHHHHHcC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSE-----VGDIVVGTVLAPGS-------------------------TRAMECRMAAFYAG  123 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~-----ID~vi~g~~~~~~~-------------------------~~~~~a~~va~~~G  123 (374)
                      ....+..+..+|+.+++....+     ...+..+.......                         ....++..++.++|
T Consensus        88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~  167 (270)
T d2ix4a1          88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG  167 (270)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence            4466777889999999864322     12333332221100                         01235778899999


Q ss_pred             CCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCC
Q 017289          124 FPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       124 l~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s  168 (374)
                      +  .+|.++++++|+|++.||.+|+++|++|++|++||+|+|...
T Consensus       168 l--~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~  210 (270)
T d2ix4a1         168 F--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI  210 (270)
T ss_dssp             C--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             C--CCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhh
Confidence            9  589999999999999999999999999999999999998754

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=99.19  E-value=5e-11  Score=101.51  Aligned_cols=97  Identities=16%  Similarity=0.198  Sum_probs=86.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|+++||+++|++++|||.|++++..+... .+..+..++..||.  +.+++.++.+|+++..++..|..
T Consensus        45 ~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~-~p~~a~~v~~~Lg~--~~~~~di~~~C~g~~~al~~a~~  121 (172)
T d1ub7a1          45 EDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDAL-FPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHA  121 (172)
T ss_dssp             TTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEE-ESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHhhcCcccccceEEEEeccccccc-ccchHHHHHHHhcc--CccceeehhccccHHHHHHHHhh
Confidence            4678899999999999999999999999999987765543 45678889999996  57899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCCC
Q 017289          150 AIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s~  169 (374)
                      .+++|.++.+|++++|..|.
T Consensus       122 ~~~~~~~~~~Lvv~~e~~S~  141 (172)
T d1ub7a1         122 LVEAGLAQKVLAVGAEALSK  141 (172)
T ss_dssp             HHHTTSCSEEEEEEEECGGG
T ss_pred             hhhcCCcceeEEeccccccc
Confidence            99999999999999998764

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.14  E-value=1.2e-10  Score=101.51  Aligned_cols=95  Identities=13%  Similarity=0.086  Sum_probs=83.7

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceee-cccCchHHHHHHHHHHHH
Q 017289           73 LADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTV-NRQCSSGLQAVADVATAI  151 (374)
Q Consensus        73 s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v-~~acaSg~~ai~~Aa~~I  151 (374)
                      ...+|+.+|+++||+++|+++++||.|++++..+..  .+..+..++..+|++.+.+.+.+ +.+|+++..+|..|...|
T Consensus        74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~--~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l  151 (200)
T d1u0ma1          74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM--MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFC  151 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCC--SSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCC--cchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHH
Confidence            467899999999999999999999999998765432  46778889999999766777877 579999999999999999


Q ss_pred             HcCCCCEEEEEeeccCCC
Q 017289          152 KAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       152 ~sG~~d~vLv~G~E~~s~  169 (374)
                      ++|..+.|||+++|.+|.
T Consensus       152 ~~~~~~~vLvv~~e~~S~  169 (200)
T d1u0ma1         152 TAYPEANALIVACEFCSL  169 (200)
T ss_dssp             HHSTTCEEEEEEEEEGGG
T ss_pred             HhCCCCEEEEEEEecccc
Confidence            999999999999998764

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.06  E-value=3.6e-10  Score=98.65  Aligned_cols=92  Identities=14%  Similarity=0.250  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-----------C--------------cccHHHHHHHHcCC
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-----------T--------------RAMECRMAAFYAGF  124 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-----------~--------------~~~~a~~va~~~Gl  124 (374)
                      ...|+..++++||+|+|+++++++    ++++|+..+...           .              ...++..++..+|+
T Consensus        70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl  149 (208)
T d1tqyb1          70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM  149 (208)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred             ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence            456888999999999999987765    577776543210           0              01246788999999


Q ss_pred             CCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCC
Q 017289          125 PETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       125 ~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s  168 (374)
                        ++|.++++++|+||+.||..|+++|++| +|++||+|+|.+.
T Consensus       150 --~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l  190 (208)
T d1tqyb1         150 --RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSAL  190 (208)
T ss_dssp             --CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCC
T ss_pred             --cceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECcccccc
Confidence              5899999999999999999999999999 9999999999743

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.05  E-value=2.9e-10  Score=99.78  Aligned_cols=94  Identities=20%  Similarity=0.376  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----eEEEEeecCCCC-------------------------------CcccHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVG----DIVVGTVLAPGS-------------------------------TRAMECRMA  118 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID----~vi~g~~~~~~~-------------------------------~~~~~a~~v  118 (374)
                      ...|+..++++||+|||+++++++    +++++...+...                               ....++..+
T Consensus        71 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  150 (216)
T d1tqya1          71 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV  150 (216)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred             chhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHH
Confidence            567899999999999999886655    355554332210                               001246788


Q ss_pred             HHHcCCCCCCCceeecccCchHHHHHHHHHHHHHcCCCCEEEEEeeccCCC
Q 017289          119 AFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTV  169 (374)
Q Consensus       119 a~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~~I~sG~~d~vLv~G~E~~s~  169 (374)
                      +..+|+  .+|.+++.++|+||+.||.+|+++|++|++|++||+|+|....
T Consensus       151 a~~~g~--~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~  199 (216)
T d1tqya1         151 AWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT  199 (216)
T ss_dssp             HHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS
T ss_pred             HHhcCc--cccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence            899999  5899999999999999999999999999999999999997543

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=98.93  E-value=3.1e-09  Score=94.61  Aligned_cols=94  Identities=12%  Similarity=-0.016  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee-ecccCchHHHHHHHHHHHHH
Q 017289           74 ADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT-VNRQCSSGLQAVADVATAIK  152 (374)
Q Consensus        74 ~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~-v~~acaSg~~ai~~Aa~~I~  152 (374)
                      ..+|+.+|+++||+++|+++++||.||+++..+...  +.+...+...+|+..+...+. ++.+|+++..++..|...|+
T Consensus       102 ~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~--p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~  179 (235)
T d1bi5a1         102 VPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM--PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE  179 (235)
T ss_dssp             HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS--SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc--CccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHH
Confidence            457999999999999999999999999998765432  334555666777654555554 57899999999999999999


Q ss_pred             cCCCCEEEEEeeccCCC
Q 017289          153 AGLYDIGIAAGLESMTV  169 (374)
Q Consensus       153 sG~~d~vLv~G~E~~s~  169 (374)
                      +|..+.|||+++|..|.
T Consensus       180 ~~~~~~vLvV~~E~~S~  196 (235)
T d1bi5a1         180 NNKGARVLVVCSEVTAV  196 (235)
T ss_dssp             TSTTCEEEEEEEECGGG
T ss_pred             cCCCCeEEEEEeeecce
Confidence            99999999999998765

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.75  E-value=1.2e-08  Score=88.19  Aligned_cols=81  Identities=21%  Similarity=0.243  Sum_probs=65.7

Q ss_pred             ccC--CCccccCCCCCcCCcceeEEEcCHHHHHHcCC-CceEEEEEEEEeccCC--CCCCCCHHHHHHHHHHHcCCCCCC
Q 017289          279 FKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGL-PILGVFRSFSAVGVDP--SVMGIGPAVAIPAAVKSAGLQIDD  353 (374)
Q Consensus       279 ~~~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~-~p~a~i~g~~~~~~~p--~~~~~~~~~A~~~Al~~AGl~~~D  353 (374)
                      |+.  +|++       ++||++++||++++.|+++|. +++++|.|++...+..  .....+..+++++||+++|++++|
T Consensus         9 FD~~a~G~~-------~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~~~~~g~~~~i~~aL~~a~i~~~d   81 (194)
T d1tqyb2           9 FDERAAGYV-------PGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPED   81 (194)
T ss_dssp             TSTTCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCCSHHHHHHHHHHHHTCCGGG
T ss_pred             ccCCCCCEe-------eEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccccchhhhhhhhhhhcccccccccc
Confidence            654  4777       999999999999999999997 5789999998764322  222345678999999999999999


Q ss_pred             ccEEEecCcchhH
Q 017289          354 INLFEINEVLVPI  366 (374)
Q Consensus       354 ID~~ei~d~Fa~~  366 (374)
                      ||++|.|-.-+..
T Consensus        82 i~~v~ahgtGt~~   94 (194)
T d1tqyb2          82 VDVVFADGAGVPE   94 (194)
T ss_dssp             CCEEECCCCCSHH
T ss_pred             eeeeeccccCccc
Confidence            9999999766543

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.74  E-value=7.3e-09  Score=87.18  Aligned_cols=96  Identities=10%  Similarity=0.072  Sum_probs=83.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHHH
Q 017289           70 KDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAT  149 (374)
Q Consensus        70 ~~~s~~eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa~  149 (374)
                      .+.+..+|+.+|++++|++.+  +++||.+++++..+... .+..+..+...+|++....++.++.+|+++..+|..|..
T Consensus        46 ~~E~~~~ma~~Aa~~al~~~~--~~~id~li~~t~~~~~~-~p~~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~  122 (166)
T d1xpma1          46 VNQDIVSMGANAAKDIITDED--KKKIGMVIVATESAVDA-AKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKD  122 (166)
T ss_dssp             TTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBS-SSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHH
T ss_pred             CccCHHHHHHHHHHhhhcccc--CCCCCeEEEeccccccc-cchhHHHHHHhhccccceEEeeecccHHHHHHHHHHHhh
Confidence            467899999999999998764  78999999988766543 456788899999997678899999999999999999999


Q ss_pred             HHHcCCCCEEEEEeeccCC
Q 017289          150 AIKAGLYDIGIAAGLESMT  168 (374)
Q Consensus       150 ~I~sG~~d~vLv~G~E~~s  168 (374)
                      .|++|..+.+||++.|..+
T Consensus       123 ~i~~~~~~~alvV~sd~~~  141 (166)
T d1xpma1         123 YLATRPNEKVLVIATDTAR  141 (166)
T ss_dssp             HHTTCTTCEEEEEEEEEEC
T ss_pred             HHhcCCCCeEEEEEEceEe
Confidence            9999999999999999644

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.67  E-value=1.9e-08  Score=87.60  Aligned_cols=80  Identities=19%  Similarity=0.225  Sum_probs=65.1

Q ss_pred             ccC--CCccccCCCCCcCCcceeEEEcCHHHHHHcCCCceEEEEEEEEeccCC-----CCCCCCHHHHHHHHHHHcCCCC
Q 017289          279 FKK--DGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDP-----SVMGIGPAVAIPAAVKSAGLQI  351 (374)
Q Consensus       279 ~~~--~~~lt~~~~~~~~DGAaAvVL~s~~~A~~~g~~p~a~i~g~~~~~~~p-----~~~~~~~~~A~~~Al~~AGl~~  351 (374)
                      |+.  +|++       ++||++++||.+.+.|++.|.+++++|.|++...+..     .........+++++|+++|+++
T Consensus        10 FD~~adG~v-------~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~   82 (205)
T d1tqya2          10 FDGTRDGFV-------LAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDA   82 (205)
T ss_dssp             TBTTCCCBC-------EECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred             ccCCCCCEe-------eEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCc
Confidence            553  5777       8999999999999999999999999999998765322     2222234688999999999999


Q ss_pred             CCccEEEecCcchh
Q 017289          352 DDINLFEINEVLVP  365 (374)
Q Consensus       352 ~DID~~ei~d~Fa~  365 (374)
                      +|||+||.|-.=+.
T Consensus        83 ~~i~~ie~hgtGt~   96 (205)
T d1tqya2          83 TDIDYINAHGSGTR   96 (205)
T ss_dssp             GGCCEEECCCCCCH
T ss_pred             cceeeeeccccccc
Confidence            99999999976543

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=97.04  E-value=0.00026  Score=58.23  Aligned_cols=52  Identities=23%  Similarity=0.336  Sum_probs=40.3

Q ss_pred             CceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          314 PILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       314 ~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      +++++|.|++.+.+.     |.+.+.+..+++++||++||++++|||++|.|--=+.
T Consensus         1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~   57 (161)
T d1e5ma2           1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTP   57 (161)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred             CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCc
Confidence            467899999987542     2233345578999999999999999999999965443

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.01  E-value=0.00026  Score=58.03  Aligned_cols=52  Identities=19%  Similarity=0.275  Sum_probs=41.0

Q ss_pred             CceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          314 PILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       314 ~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      +++++|+|++...+.     |...+.+..+++++||+++|+.++|||++|.|-.=+.
T Consensus         1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~   57 (158)
T d1ox0a2           1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTP   57 (158)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCH
T ss_pred             CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccc
Confidence            367899999987532     3333344568999999999999999999999977654

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=96.93  E-value=0.00038  Score=56.99  Aligned_cols=52  Identities=23%  Similarity=0.386  Sum_probs=40.7

Q ss_pred             CceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          314 PILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       314 ~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      +++++|.|++.+.+.     |...+.+...+++++|+++|++++|||++|.|-.=+.
T Consensus         1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~   57 (159)
T d1j3na2           1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTP   57 (159)
T ss_dssp             CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred             CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCc
Confidence            467899999987532     3333445578999999999999999999999976543

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=96.77  E-value=0.00058  Score=55.94  Aligned_cols=51  Identities=22%  Similarity=0.363  Sum_probs=39.5

Q ss_pred             CceEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcch
Q 017289          314 PILGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLV  364 (374)
Q Consensus       314 ~p~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa  364 (374)
                      +++++|+|++...+.     |...+.+...+++++|+++|++++||||+|.|--=+
T Consensus         1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT   56 (161)
T d2gfva2           1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTST   56 (161)
T ss_dssp             CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSC
T ss_pred             CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccC
Confidence            467899999987532     233333456899999999999999999999996543

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=96.57  E-value=0.00093  Score=54.67  Aligned_cols=50  Identities=20%  Similarity=0.380  Sum_probs=38.4

Q ss_pred             eEEEEEEEEeccC-----CCCCCCCHHHHHHHHHHHcCCCCCCccEEEecCcchh
Q 017289          316 LGVFRSFSAVGVD-----PSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEVLVP  365 (374)
Q Consensus       316 ~a~i~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~Fa~  365 (374)
                      +++|+|++.+.+.     |...+.+...+++++|+++|++++||||+|.|-.-+.
T Consensus         1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~   55 (161)
T d2ix4a2           1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTP   55 (161)
T ss_dssp             CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCH
T ss_pred             CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCC
Confidence            4789999987532     3333334457899999999999999999999976554

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.93  E-value=0.052  Score=43.10  Aligned_cols=83  Identities=13%  Similarity=0.109  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCcee-e----cccCchHHHHHHHHHHH
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRT-V----NRQCSSGLQAVADVATA  150 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~-v----~~acaSg~~ai~~Aa~~  150 (374)
                      ....++++++|+++|++++|||.+++-..      ....-..++..+|++.+....+ +    +++++|-..++..+.+.
T Consensus        48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hqa------~~~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a~~~  121 (148)
T d1u6ea2          48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQA------NSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTT  121 (148)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEECCS------CHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCcccccEEEeccc------cHHHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHHHHc
Confidence            45567899999999999999999887432      2235567888999975443332 2    23333444455555443


Q ss_pred             HHcCCCCEEEEEee
Q 017289          151 IKAGLYDIGIAAGL  164 (374)
Q Consensus       151 I~sG~~d~vLv~G~  164 (374)
                      =+-..-|.+|.+|+
T Consensus       122 g~i~~Gd~vll~gf  135 (148)
T d1u6ea2         122 GAAKPGDLALLIGY  135 (148)
T ss_dssp             TSSCTTCEEEEEEE
T ss_pred             CCCCCCCEEEEEEE
Confidence            11112367777664

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=94.40  E-value=0.059  Score=42.49  Aligned_cols=84  Identities=14%  Similarity=0.144  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCchHHHHHHHHH-HHHHcC
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVA-TAIKAG  154 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~acaSg~~ai~~Aa-~~I~sG  154 (374)
                      ....++++++|+++|++++|||.++.-..      ....-..++..+|++.+....++..-+.++...+-.+. +.++.|
T Consensus        44 ~~~~~~i~~~L~~~g~~~~dId~~i~Hq~------~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~  117 (143)
T d1hnja2          44 TELAHIVDETLAANNLDRSQLDWLVPHQA------NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDG  117 (143)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEEECCS------CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTT
T ss_pred             hhhhHHHHHHHHHhhhcccccceEEeccC------chHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhC
Confidence            34577889999999999999999986332      12345677889999854433443333333333333332 234444


Q ss_pred             C---CCEEEEEeec
Q 017289          155 L---YDIGIAAGLE  165 (374)
Q Consensus       155 ~---~d~vLv~G~E  165 (374)
                      .   -|.+|.+|+-
T Consensus       118 ~~~~Gd~vll~g~G  131 (143)
T d1hnja2         118 RIKPGQLVLLEAFG  131 (143)
T ss_dssp             CSCTTCEEEEEEEE
T ss_pred             CCCCCCEEEEEEEe
Confidence            3   3788887764

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=93.51  E-value=0.13  Score=40.58  Aligned_cols=83  Identities=18%  Similarity=0.088  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCceeecccCc----hHHHHHHHHHHHHH
Q 017289           77 LLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCS----SGLQAVADVATAIK  152 (374)
Q Consensus        77 La~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~~~v~~aca----Sg~~ai~~Aa~~I~  152 (374)
                      ...++++++|+++|++++|||.++.-..      ....-..+...+|++.+.-..++..-+.    |-..++.++.+.=+
T Consensus        48 ~vp~~i~~~L~~~g~~~~dId~~i~Hqa------~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~~  121 (149)
T d1ub7a2          48 VMNTATLEAIEKAGLTPEDIRLFVPHQA------NLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAGR  121 (149)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCS------CHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhhccccccccEEEeecc------chHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcCC
Confidence            4467889999999999999999887432      2245667888999975443343333333    33344444444311


Q ss_pred             cCCCCEEEEEeec
Q 017289          153 AGLYDIGIAAGLE  165 (374)
Q Consensus       153 sG~~d~vLv~G~E  165 (374)
                      -..-|.+|++|+-
T Consensus       122 ~~~Gd~vll~g~G  134 (149)
T d1ub7a2         122 IREGDHVLLVSFG  134 (149)
T ss_dssp             SCTTCEEEEEEEE
T ss_pred             CCCCCEEEEEEEc
Confidence            2234788877764

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=92.38  E-value=0.17  Score=40.13  Aligned_cols=83  Identities=14%  Similarity=0.191  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCeEEEEeecCCCCCcccHHHHHHHHcCCCCCCCc-eeecccCchHHHHH-HHHHHHHHc
Q 017289           76 DLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPL-RTVNRQCSSGLQAV-ADVATAIKA  153 (374)
Q Consensus        76 eLa~~A~~~AL~dAGl~~~~ID~vi~g~~~~~~~~~~~~a~~va~~~Gl~~~~p~-~~v~~acaSg~~ai-~~Aa~~I~s  153 (374)
                      .-..++++++|+++|++.+|||.+++-..      ....-..++..+|++.+.-. ..+..-+.++..++ ..-...++.
T Consensus        48 ~~vp~~i~~~L~~~gl~~~dId~~i~Hq~------~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~~~~~  121 (153)
T d1mzja2          48 ADVVPAAREALEVAGLTVGDLVAFVPHQA------NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRS  121 (153)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCS------CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCcccCCEEEEcCC------cHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHHHHHc
Confidence            45566888999999999999999987432      22455678889999754422 22333332332232 122234444


Q ss_pred             CC---CCEEEEEee
Q 017289          154 GL---YDIGIAAGL  164 (374)
Q Consensus       154 G~---~d~vLv~G~  164 (374)
                      |.   -|.+|++|+
T Consensus       122 ~~~~~Gd~ill~~f  135 (153)
T d1mzja2         122 GAVPGGGPALMIGF  135 (153)
T ss_dssp             TSSCTTCEEEEEEE
T ss_pred             CCCCCCCEEEEEEE
Confidence            54   378887765

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=87.54  E-value=0.26  Score=38.91  Aligned_cols=45  Identities=11%  Similarity=0.135  Sum_probs=31.7

Q ss_pred             eEEEEEEEEeccCCC---CCCCCHHHHHHHHHHHcCCCCCCccEEEecCcc
Q 017289          316 LGVFRSFSAVGVDPS---VMGIGPAVAIPAAVKSAGLQIDDINLFEINEVL  363 (374)
Q Consensus       316 ~a~i~g~~~~~~~p~---~~~~~~~~A~~~Al~~AGl~~~DID~~ei~d~F  363 (374)
                      +++|+|++.+.+...   +.+.+..++++++|+.+   +.|||++|.|-.=
T Consensus         1 Yaei~G~g~~~Dg~~~taP~~~~~~~~~~~al~~a---~~~I~~v~aHgtG   48 (151)
T d2vbaa2           1 YAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGV---DTPIDYLNSHGTS   48 (151)
T ss_dssp             CEEEEEEEEEECCSCTTSCCSHHHHHHHHHHHTTC---CSCCCEEECCCCS
T ss_pred             CEEEEEEEEecCCCCCCCcCHHHHHHHHHHhhhcC---cccceeEEEeccC
Confidence            478999998754321   12334568889998776   5799999999543