Citrus Sinensis ID: 017307

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370----
Protein Sequence
MGNNWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITESE
Secondary Structure (PSIPRED)
ccccEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcEEcEEEEEEEccEEEEEEEEEccHHHHHHHccccccccHHHHccccHHHHHHHHcccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccEEEEEEccccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccEEEEEcccccccccccccccccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccHHHEEEEcccccccEccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccEEEEEEEcEEEEEEEEEEEEEEEEEEEcHHHHHHHHcHHHccccHHHHcccHHHHHHHHHHcccEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccEEEEEEccccEEEEEcc
Coil and Loop (DISEMBL)
mgnnwffmdfnggdpyilpTEFFLARSLgdhlfsqssypyvpgslalQGAFNCISKFTGAFLFWftsgsssnlsrriagnqhgskigsykssAQVKQITstghnltgfhlssnseseyacpvvfNKVSSSAIRRLFREGGKLHLSSVLSLAaavippldnvsskvlavpldnaeiqmhesmgrspceveshrcgalsfpdlsrtrhaveprtgiefpmildnvidgenyssstSEVLVGTGSRTIKIVKIKSLKVYAFAFYvhprsvceklgpkyASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLekanpntdyhclesfgsyfskdiplplgtvINFRRTAAgqlitese
Flexible Loop (DISEMBL)
MGNNWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPCEVESHRCGalsfpdlsrtrhaveprtgiefpmILDNVIDGENYSSStsevlvgtgsrtikivKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARlekanpntdyHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITESE
Low Complexity Region (SEG)
MGNNWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHlssvlslaaavIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITESE
Disordered region (IsUnstruct)
***NWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTS***************************************GFH*******EYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDN********************CGALSFPDL**TRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQ******
Disordered Region (DISOPRED)
***NWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSG*****************************ITSTGHNLT***************VVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVP*************************************AVEPRTGIEFPMILDN************EVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCE*******************FYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLE*******YHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITE**
Disordered Region (DISEMBL)
MGNNWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHE*************CGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITESE
Disordered Region (DISPRO)
*GNNWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSS********************SAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLIT***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNNWFFMDFNGGDPYILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITESE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
224088716	422	predicted protein [Populus trichocarpa]	0.973	0.862	0.593	1e-123
255550201	428	conserved hypothetical protein [Ricinus	0.994	0.869	0.632	1e-122
225429702	422	PREDICTED: uncharacterized protein LOC10	0.970	0.860	0.601	1e-121
147857679	352	hypothetical protein VITISV_008554 [Viti	0.909	0.965	0.559	1e-105
356562163	413	PREDICTED: uncharacterized protein LOC10	0.975	0.883	0.514	1e-94
356554102	414	PREDICTED: uncharacterized protein LOC10	0.863	0.780	0.556	3e-94
297822143	386	hypothetical protein ARALYDRAFT_481490 [	0.898	0.870	0.518	8e-89
42569342	398	chalcone-flavanone isomerase-like protei	0.901	0.846	0.509	2e-87
29649081	398	hypothetical protein [Arabidopsis thalia	0.901	0.846	0.506	9e-87
388499630	395	unknown [Medicago truncatula]	0.863	0.817	0.516	2e-84

>gi|224088716|ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|222854494|gb|EEE92041.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/376 (59%), Positives = 275/376 (73%), Gaps = 12/376 (3%)

Query: 8   MDFNGGDPYILPTEFFLARSLGDHLFSQ-----------SSYPYVPGSLALQGAFNCISK 56
           MD NG   Y  P E  L++  G  LFSQ           S + +VP ++A Q A N +SK
Sbjct: 1   MDLNGESQYTFPLEPLLSQGFGAILFSQISSFVDNPLHQSGFLHVPETMAFQEALNHVSK 60

Query: 57  FTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSES 116
             G  +FWFTS SSSNLSR+I+GNQ   + GS KS AQVK  TST H+L G    S S+ 
Sbjct: 61  LAGGLIFWFTSASSSNLSRQISGNQRSPRPGSCKSPAQVKNSTSTRHDLAGLGFGSISKG 120

Query: 117 EYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQ 176
           E + PVVF+K+S+  +R L RE  +     VLSLAAA+IPP  N+SSK+LA+P +N ++ 
Sbjct: 121 ESSHPVVFSKISNFVMRLLHREAERRQSFPVLSLAAALIPPFGNLSSKLLAIPGENDDVP 180

Query: 177 MHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEV 236
           +H S G+ PCEVE   C  LSFPDL+ TRHAVEPRTGIEFPM+LD ++ G+N S  TSEV
Sbjct: 181 VHASTGQRPCEVERSGCPGLSFPDLNWTRHAVEPRTGIEFPMLLD-ILAGQNRSRLTSEV 239

Query: 237 LVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLRE 296
           LV TGSRT+ I++IK+LK+YAF FYVHP SVC+KLGPKYAS+ + ELNK   FYEDLLRE
Sbjct: 240 LVATGSRTMTIIRIKTLKIYAFGFYVHPNSVCKKLGPKYASVPMGELNKRRDFYEDLLRE 299

Query: 297 DIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLG 356
           DI MTVRLVINCNG+K+N VKD FEKSLR RL K NP+TDY+CL +FGS+F+KD+PLP+G
Sbjct: 300 DISMTVRLVINCNGIKINTVKDAFEKSLRNRLAKTNPDTDYNCLTTFGSFFTKDVPLPVG 359

Query: 357 TVINFRRTAAGQLITE 372
           TV++FRRTA GQLITE
Sbjct: 360 TVVDFRRTADGQLITE 375

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550201|ref|XP_002516151.1| conserved hypothetical protein [Ricinus communis] gi|223544637|gb|EEF46153.1| conserved hypothetical protein [Ricinus communis]

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/381 (63%), Positives = 285/381 (74%), Gaps = 9/381 (2%)

Query: 1   MGNNW-FFMDFNGGDPYILPTEFFLARSLGDHLFS-------QSSYPYVPGSLALQGAFN 52
           M NNW FFM+ + G P ILP E  L++SL   LFS       QS + Y+PGSLA Q   N
Sbjct: 1   MRNNWLFFMNPDDGSPNILPIEPLLSQSLRGPLFSPLDNSLHQSRFLYIPGSLAFQEVLN 60

Query: 53  CISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHN-LTGFHLS 111
           C+SK  GA LFWFTS SSS+LS++I+G+Q G   GS     QVK IT   HN L GF + 
Sbjct: 61  CMSKLAGALLFWFTSTSSSSLSQQISGSQQGPGAGSSSQFTQVKNITLIRHNNLIGFPIG 120

Query: 112 SNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLD 171
           S+S+SE +  VVF K+SS  +R L RE  +L     LSLA A++PP D +SSKVLAVPL+
Sbjct: 121 SSSQSESSSHVVFGKISSFMMRILSREAERLQSFPFLSLATALVPPFDRLSSKVLAVPLE 180

Query: 172 NAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSS 231
           N E+Q+H S+ + PCEV+ H C +LSFPDL+  R AVEPRTGIEFPMILD+++  EN SS
Sbjct: 181 NGEVQVHRSVDQMPCEVDHHGCSSLSFPDLNWRRQAVEPRTGIEFPMILDSILAAENKSS 240

Query: 232 STSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYE 291
            +SEVLVGTGSRT+KI+KIKSLKVYAF FYVHP SVCEKLGPKYAS+  AELN C  FYE
Sbjct: 241 LSSEVLVGTGSRTMKIIKIKSLKVYAFGFYVHPNSVCEKLGPKYASVPAAELNNCRDFYE 300

Query: 292 DLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDI 351
           DLLREDI MTVRLVINCNGMK+N VKD FEKSLR RL K NP+TDY CL +FGS+F+KDI
Sbjct: 301 DLLREDIGMTVRLVINCNGMKINTVKDAFEKSLRNRLLKTNPDTDYSCLRTFGSFFTKDI 360

Query: 352 PLPLGTVINFRRTAAGQLITE 372
           PLP GT ++FRRTA GQLITE
Sbjct: 361 PLPAGTTVDFRRTADGQLITE 381

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429702|ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266232 [Vitis vinifera] gi|296081726|emb|CBI20731.3| unnamed protein product [Vitis vinifera]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/384 (60%), Positives = 273/384 (71%), Gaps = 21/384 (5%)

Query: 1   MGNNW-FFMDFNGGDPYILPTEFFLARSLGDHLFSQ-----------SSYPYVPGSLALQ 48
           M N W FFMDF+GG PYI PTE  ++ S G HL S            S   Y PGS ALQ
Sbjct: 1   MRNIWLFFMDFDGGSPYIDPTES-ISNSFGGHLLSHVTSFVDNSVYGSRRIYAPGSAALQ 59

Query: 49  GAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGF 108
            AF+CISKF GA L   +SGS+SN+  R +G+ H SK  ++KS A+V    S  HNLTGF
Sbjct: 60  EAFDCISKFAGAVLLQLSSGSNSNIRHRSSGDPHVSKPKNWKSCAKVDPTCSCKHNLTGF 119

Query: 109 HLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAV 168
             SS S+ + +  + F++VS+  IR+  RE   L    V +LAAA++PPLDN++ KV+AV
Sbjct: 120 CFSSRSKGKASGRLPFDEVSNFTIRQFCREVQGLESIPVFTLAAALVPPLDNLTPKVMAV 179

Query: 169 PLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGEN 228
           PL        E  G   CE+E  R    SFPDL+ TRHAVEPRTGIEFP ILDN++ GEN
Sbjct: 180 PL--------EDTGVRSCEIEHQRSSHFSFPDLNWTRHAVEPRTGIEFPTILDNILVGEN 231

Query: 229 YSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGG 288
            SS TSEVLVGTGSRT+KI+KIKSLKVYAF FYVHP  +CEKLGPKYASI V ELNK   
Sbjct: 232 NSSLTSEVLVGTGSRTMKIIKIKSLKVYAFGFYVHPLLICEKLGPKYASIPVDELNKRQD 291

Query: 289 FYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFS 348
           FYEDLLREDI+MTVRLV+NCNGMK+N V+D FEKSLR RL K NP+TDY CL +FGSYF+
Sbjct: 292 FYEDLLREDINMTVRLVVNCNGMKINTVRDAFEKSLRNRLLKTNPDTDYQCLTTFGSYFT 351

Query: 349 KDIPLPLGTVINFRRTAAGQLITE 372
           +DIPLP GT I+FRRTA GQLITE
Sbjct: 352 QDIPLPAGTTIDFRRTADGQLITE 375

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147857679|emb|CAN82880.1| hypothetical protein VITISV_008554 [Vitis vinifera]

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/386 (55%), Positives = 254/386 (65%), Gaps = 46/386 (11%)

Query: 1   MGNNW-FFMDFNGGDPYILPTEFFLARSLGDHLFSQ-----------SSYPYVPGSLALQ 48
           M N W FFMDF+GG PYI PTE  ++ S G HL S            S   Y PGS ALQ
Sbjct: 1   MRNIWLFFMDFDGGSPYIDPTES-ISNSFGGHLLSHVTSFVDNSVYGSRRIYAPGSAALQ 59

Query: 49  GAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGF 108
            AF+CISKF GA L   +SGS+SN+  R +G+ H SK  ++KS A+V Q  S  HNLTGF
Sbjct: 60  EAFDCISKFAGAVLLRLSSGSNSNIRHRSSGDPHVSKPKNWKSCAKVDQTCSCKHNLTGF 119

Query: 109 HLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAV 168
             SS S+ + +  + F++VS+  IR+  RE   L    V +LAAA++PPLDN++ KV+AV
Sbjct: 120 CFSSRSKGKASGRLPFDEVSNFTIRQFCREVQGLESIPVFTLAAALVPPLDNLTPKVMAV 179

Query: 169 PLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGEN 228
           PL        E  G   CE+E  R    SFPDL+ TRHAVEPRTGIEFP ILDN++ GEN
Sbjct: 180 PL--------EDTGVRSCEIEHQRSSHFSFPDLNWTRHAVEPRTGIEFPTILDNILVGEN 231

Query: 229 YSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGG 288
            SS TSEVLVGTGSRT+KI+KIKSLKVYAF FYVHP  +CEKLGPKYASI V ELNK   
Sbjct: 232 NSSLTSEVLVGTGSRTMKIIKIKSLKVYAFGFYVHPLLICEKLGPKYASIPVDELNKRQD 291

Query: 289 FYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFS 348
           FYEDLLREDI+MTVRLV+NCNGMK+N V+D FEKSLR RL K                  
Sbjct: 292 FYEDLLREDINMTVRLVVNCNGMKINTVRDAFEKSLRNRLLK------------------ 333

Query: 349 KDIPLPLGTVINFRRTAAGQLITESE 374
                  GT I+FRRTA GQLITES 
Sbjct: 334 -------GTTIDFRRTADGQLITESR 352

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562163|ref|XP_003549342.1| PREDICTED: uncharacterized protein LOC100803025 [Glycine max]

 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/373 (51%), Positives = 250/373 (67%), Gaps = 8/373 (2%)

Query: 1   MGNNWFFMDFNGGDPYILP-TEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTG 59
           M N++ ++     DP +    E F+ RS     F QS       S AL+ AF  +S+F G
Sbjct: 1   MNNDFVWLPSLYSDPELFTYLEPFVFRSSPSSHFLQS-MANNSRSFALEEAFGHVSRFAG 59

Query: 60  AFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYA 119
           A LFW +  SSSNL+R + G+    + GS     QVK + ST   + GF      +S +A
Sbjct: 60  ALLFWLSRASSSNLARSLRGSSPPLRFGS----VQVKAV-STNVRVFGFPFGLKRKSSFA 114

Query: 120 CPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHE 179
             V   K+SS A+R ++RE  +L    VLSLAAA++PP  N+SS VL+ PL N ++QM  
Sbjct: 115 S-VRLGKISSLAMRMIWREAKRLRSFPVLSLAAALVPPFQNLSSNVLSSPLQNPDVQMFG 173

Query: 180 SMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVG 239
           +M + P EVE   C  L   +L++ + AVEP+TGIEFP++LDN+  GE      SEVLVG
Sbjct: 174 AMDQVPKEVECQGCAFLPCLELNQAKPAVEPKTGIEFPLVLDNIFTGEKNYDFNSEVLVG 233

Query: 240 TGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDID 299
           TGSRT+ IVKIKSLKVYAF  YVHP S+CEKLGPKYASIS  ELN    FY+DLLREDI+
Sbjct: 234 TGSRTMTIVKIKSLKVYAFGVYVHPYSLCEKLGPKYASISADELNNHHDFYKDLLREDIN 293

Query: 300 MTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVI 359
           MTVRLV+NC GMK+N+VKD FEKSLRARL K NP+TD+ CL++FGSYF+++  +PLGT+I
Sbjct: 294 MTVRLVVNCRGMKINSVKDAFEKSLRARLVKTNPSTDFSCLKTFGSYFTENFSIPLGTII 353

Query: 360 NFRRTAAGQLITE 372
            F+RT  G+LIT+
Sbjct: 354 EFKRTVDGRLITK 366

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554102|ref|XP_003545388.1| PREDICTED: uncharacterized protein LOC100789760 [Glycine max]

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 183/329 (55%), Positives = 237/329 (72%), Gaps = 6/329 (1%)

Query: 44  SLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGH 103
           S AL+ AF  +S+F+GA LFW +  SSSN++R + G+    + GS     QVK  ++T  
Sbjct: 45  SFALEEAFGHVSRFSGALLFWLSRASSSNVARSLRGSPP-LRFGS----VQVKAGSTTNV 99

Query: 104 NLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSS 163
            + GF   S  +S ++  V   K+SS A+R ++RE  +L L  VLSLA A++PP  N+SS
Sbjct: 100 RVFGFPFGSKWKSSFSS-VRLGKISSLAMRMIWREAKRLSLFPVLSLAVALVPPFQNLSS 158

Query: 164 KVLAVPLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNV 223
            VLA PL N ++Q+  +M + P EVE   C  L   +LS+ + AVEP+TGIEFP++LDN+
Sbjct: 159 NVLASPLLNPDVQIFGAMDQVPKEVECQGCSFLPCLELSQAKPAVEPKTGIEFPLVLDNL 218

Query: 224 IDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAEL 283
             GE   +  SEVLVGTGSRT+ IVKIKSLKVYAF  YVHP S+CEKLGPKYASIS  EL
Sbjct: 219 FTGEKNYNLNSEVLVGTGSRTMTIVKIKSLKVYAFGVYVHPYSLCEKLGPKYASISADEL 278

Query: 284 NKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESF 343
           N    FY+DLLREDI+MTVRLV NC GMK+N+VKD FEKSLRARL KANP+TD+ CL++F
Sbjct: 279 NNHHDFYKDLLREDINMTVRLVANCRGMKINSVKDAFEKSLRARLVKANPSTDFSCLKTF 338

Query: 344 GSYFSKDIPLPLGTVINFRRTAAGQLITE 372
           GSYF+++I +PLGTVI F+RT  G+LIT+
Sbjct: 339 GSYFTENISIPLGTVIEFKRTVDGRLITK 367

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822143|ref|XP_002878954.1| hypothetical protein ARALYDRAFT_481490 [Arabidopsis lyrata subsp. lyrata] gi|297324793|gb|EFH55213.1| hypothetical protein ARALYDRAFT_481490 [Arabidopsis lyrata subsp. lyrata]

 Score =  333 bits (854), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 184/355 (51%), Positives = 233/355 (65%), Gaps = 19/355 (5%)

Query: 19  PTEFFLARSLGDH-LFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRI 77
           P      RS   H LFSQ    ++PGS A + AF+CISKFTGA L WF+ G   NL + +
Sbjct: 3   PNSVIPKRSFLHHELFSQL---HIPGSFAFE-AFSCISKFTGALLCWFSHG---NLQKEV 55

Query: 78  AGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFR 137
           + +Q G    S  SS  +        ++  FH  S   +    P  F  +S S I+    
Sbjct: 56  SKHQWGLTCKSSDSSKNL--FEHRNFSVFPFHYVSKDIT----PGFFGSISKSTIQHFVN 109

Query: 138 EGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPCEVESHRCGALS 197
           E  +LH  SVLSLAAA+IP L+ +S+   A+PL + ++Q+ E+ G   C+V       LS
Sbjct: 110 EAERLHSCSVLSLAAALIPSLNVMSAYGHALPLGSNDVQLSENTGNRTCQVGHEEYSGLS 169

Query: 198 FPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYA 257
           F  L  TR  VEPRTGIEFPM+L      EN S S SEVLV TGSRT+KI++IKSLKVYA
Sbjct: 170 FHKLDWTRQTVEPRTGIEFPMLLK-----ENASRSNSEVLVATGSRTMKIIRIKSLKVYA 224

Query: 258 FAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVK 317
           F FYVHP SVC+KLG KYAS+  ++L+KC   Y+DLLREDI M+VRLV+N NG+K+N V+
Sbjct: 225 FGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVR 284

Query: 318 DVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITE 372
           DVFEKSLRARL KANP TD++CL  FGS+F +DIP+P GT+I+FRRT  GQLITE
Sbjct: 285 DVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITE 339

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42569342|ref|NP_180199.3| chalcone-flavanone isomerase-like protein [Arabidopsis thaliana] gi|61742610|gb|AAX55126.1| hypothetical protein At2g26310 [Arabidopsis thaliana] gi|330252727|gb|AEC07821.1| chalcone-flavanone isomerase-like protein [Arabidopsis thaliana]

 Score =  329 bits (843), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 188/369 (50%), Positives = 241/369 (65%), Gaps = 32/369 (8%)

Query: 14  DP-YILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSN 72
           DP  +LP   FL       LFSQ    ++PGSLA + AF+CISKFTGA L WF+ G   N
Sbjct: 5   DPNSVLPKRSFLQH----ELFSQL---HIPGSLAFE-AFSCISKFTGALLCWFSHG---N 53

Query: 73  LSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAI 132
           L + ++ +Q G    S  S   V +  +   ++  FH  S   S    P  F  +S S I
Sbjct: 54  LQKEVSKHQWGLTCKSRDSLKHVFEHRNV--SVFPFHYVSKDIS----PGFFGNISKSTI 107

Query: 133 RRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPC-EVESH 191
           +    E  +LH  S+LSLAAA+IP L+ +S+  LA+PL + ++++ E++    C E   H
Sbjct: 108 QHFVNEAERLHSCSLLSLAAAMIPSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEH 167

Query: 192 RC--------GALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSR 243
           R           LSF  L  TR +VEPRTGIEFPM+L      EN S S SEVLV TGSR
Sbjct: 168 RTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLLK-----ENASRSNSEVLVATGSR 222

Query: 244 TIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVR 303
           T+KI++IKSLKVYAF FYVHP SVC+KLG KYAS+  ++L+KC   Y+DLLREDI M+VR
Sbjct: 223 TMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVR 282

Query: 304 LVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRR 363
           LV+N NG+K+N V+DVFEKSLRARL KANP TD++CL  FGS+F +DIP+P GT+I+FRR
Sbjct: 283 LVVNYNGLKINTVRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRR 342

Query: 364 TAAGQLITE 372
           T  GQLITE
Sbjct: 343 TEDGQLITE 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|29649081|gb|AAO86844.1| hypothetical protein [Arabidopsis thaliana]

 Score =  326 bits (836), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 187/369 (50%), Positives = 240/369 (65%), Gaps = 32/369 (8%)

Query: 14  DP-YILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSN 72
           DP  +LP   FL       LFSQ    ++PGSLA + AF+CISKFTGA L WF+ G   N
Sbjct: 5   DPNSVLPKRSFLQH----ELFSQL---HIPGSLAFE-AFSCISKFTGALLCWFSHG---N 53

Query: 73  LSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAI 132
           L + ++ +Q G    S  S   V +  +   ++  FH  S   S    P  F  +S S I
Sbjct: 54  LQKEVSKHQWGLTCKSRDSLKHVFEHRNV--SVFPFHYVSKDIS----PGFFGNISKSTI 107

Query: 133 RRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPC-EVESH 191
           +    E  +LH  S+LSLAAA+IP L+ +S+  LA+PL + ++++ E++    C E   H
Sbjct: 108 QHFVNEAERLHSCSLLSLAAAMIPSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEH 167

Query: 192 RC--------GALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSR 243
           R           LSF  L  TR +VEPRTGIEFPM+L      EN S S SEVLV TGSR
Sbjct: 168 RTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLLK-----ENASRSNSEVLVATGSR 222

Query: 244 TIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVR 303
           T+KI++IKSLKVYAF FYVHP SVC+KLG KYAS+  ++L+KC   Y+DLLREDI M+VR
Sbjct: 223 TMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVR 282

Query: 304 LVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRR 363
           LV+N NG+K+N V+DVFEKSLRARL KANP TD++CL  FGS+F +DI +P GT+I+FRR
Sbjct: 283 LVVNYNGLKINTVRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIAIPAGTIIDFRR 342

Query: 364 TAAGQLITE 372
           T  GQLITE
Sbjct: 343 TEDGQLITE 351

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499630|gb|AFK37881.1| unknown [Medicago truncatula]

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 170/329 (51%), Positives = 224/329 (68%), Gaps = 6/329 (1%)

Query: 44  SLALQGAFNCISKFTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGH 103
           S A++ AF  +SKF GA LFWF+ G S   S R  G      +     + +VK +  T +
Sbjct: 26  SSAIEEAFGRVSKFAGALLFWFSGGGSGGGSLRFGGGGGFGNV-----NLKVKPVI-TNN 79

Query: 104 NLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSS 163
               F     S+ +    V   K+SS  +R  +RE  ++    VLSLAAA++PP+ N+SS
Sbjct: 80  VAPRFGFGFGSKRKTCERVSLGKISSFVVRLFWREAKRIQSFPVLSLAAALVPPIQNLSS 139

Query: 164 KVLAVPLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNV 223
            +L+ P+ + ++QMH  M + P +VE   C  LS  +LS     VEP+TGIEFP++LDN+
Sbjct: 140 NLLSGPMQDPDVQMHGGMDQVPKDVERRGCPRLSISELSLANSTVEPKTGIEFPVVLDNL 199

Query: 224 IDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAEL 283
             G+  SS  SEVLVGTGS+ + IVKIK+LKVYAF FYVHP S+CEKLGPKYASIS  EL
Sbjct: 200 SAGDRNSSLGSEVLVGTGSKNMTIVKIKTLKVYAFGFYVHPYSLCEKLGPKYASISADEL 259

Query: 284 NKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESF 343
           N    FY+DLLREDI+MTVRLV+NC GMK+N+V+D FEKSLRARL K NP+ D+ CL +F
Sbjct: 260 NDRNDFYQDLLREDINMTVRLVVNCKGMKINSVRDAFEKSLRARLVKTNPSADFDCLWTF 319

Query: 344 GSYFSKDIPLPLGTVINFRRTAAGQLITE 372
           GSYF+++IP+PLGT+I F+RT  G+LITE
Sbjct: 320 GSYFTENIPIPLGTIIEFKRTVDGRLITE 348

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	374
TAIR|locus:2057751	398	FAP2 "fatty-acid-binding prote	0.901	0.846	0.493	5.4e-79
TAIR|locus:2077229	279	FAP1 "fatty-acid-binding prote	0.435	0.584	0.291	1.5e-14

TAIR|locus:2057751 FAP2 "fatty-acid-binding protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 182/369 (49%), Positives = 233/369 (63%)

Query:    14 DPY-ILPTEFFLARSLGDHLFSQSSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSN 72
             DP  +LP   FL   L    FSQ    ++PGSLA + AF+CISKFTGA L WF+ G   N
Sbjct:     5 DPNSVLPKRSFLQHEL----FSQL---HIPGSLAFE-AFSCISKFTGALLCWFSHG---N 53

Query:    73 LSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAI 132
             L + ++ +Q G    S  S   V +  +   ++  FH  S   S    P  F  +S S I
Sbjct:    54 LQKEVSKHQWGLTCKSRDSLKHVFEHRNV--SVFPFHYVSKDIS----PGFFGNISKSTI 107

Query:   133 RRLFREGGKLHXXXXXXXXXXXIPPLDNVSSKVLAVPLDNAEIQMHESMGRSPC-EVESH 191
             +    E  +LH           IP L+ +S+  LA+PL + ++++ E++    C E   H
Sbjct:   108 QHFVNEAERLHSCSLLSLAAAMIPSLNVMSANGLALPLGSNDVKLRENIEHRTCPENTEH 167

Query:   192 R-C-------GALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSR 243
             R C         LSF  L  TR +VEPRTGIEFPM+L      EN S S SEVLV TGSR
Sbjct:   168 RTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLLK-----ENASRSNSEVLVATGSR 222

Query:   244 TIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVR 303
             T+KI++IKSLKVYAF FYVHP SVC+KLG KYAS+  ++L+KC   Y+DLLREDI M+VR
Sbjct:   223 TMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVR 282

Query:   304 LVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRR 363
             LV+N NG+K+N V+DVFEKSLRARL KANP TD++CL  FGS+F +DIP+P GT+I+FRR
Sbjct:   283 LVVNYNGLKINTVRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRR 342

Query:   364 TAAGQLITE 372
             T  GQLITE
Sbjct:   343 TEDGQLITE 351

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

TAIR|locus:2077229 FAP1 "fatty-acid-binding protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 51/175 (29%), Positives = 90/175 (51%)

Query:   190 SHRCGALSFPDLSRTRHAV-EPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIV 248
             SHR     +  ++    +V EP+TG  FP  +     G+      S  L+G G R   ++
Sbjct:    60 SHRSSLSPWGSITLADESVVEPKTGFSFPASI-----GD------SRRLLGVGLRKKSLL 108

Query:   249 KIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINC 308
              +K++ VYAF  Y     V + +G KYA++  +E+     F +DL+  DI MT+RL I  
Sbjct:   109 GLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVY 168

Query:   309 NGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRR 363
               + + +V++ F++S+  RL+K   + +   L+SF S F  +  +P  + I+  +
Sbjct:   169 GKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTK 223


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      374       363   0.00083  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  234 KB (2128 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.49u 0.14s 27.63t   Elapsed:  00:00:01
  Total cpu time:  27.49u 0.14s 27.63t   Elapsed:  00:00:01
  Start:  Sat May 11 04:41:13 2013   End:  Sat May 11 04:41:14 2013

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IPI

GO:0006631 "fatty acid metabolic process" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	374
PLN03175	415	PLN03175, PLN03175, hypothetical protein; Provisio	0.0
pfam02431	200	pfam02431, Chalcone, Chalcone-flavanone isomerase	3e-29
PLN03174	278	PLN03174, PLN03174, Chalcone-flavanone isomerase-r	1e-26

>gnl|CDD|178719 PLN03175, PLN03175, hypothetical protein; Provisional

 Score =  530 bits (1366), Expect = 0.0
 Identities = 216/376 (57%), Positives = 265/376 (70%), Gaps = 19/376 (5%)

Query: 8   MDFNGGDPYILPTEFFLARSLGDHLFS-----------QSSYPYVPGSLALQGAFNCISK 56
            + +    Y+ P +  L+  LG  LFS           QS    +PGSLA Q AF+CISK
Sbjct: 1   SNLDHNSGYLFPIDSPLSHDLGLGLFSHVGTFVDNSLHQSRQICIPGSLAFQEAFSCISK 60

Query: 57  FTGAFLFWFTSGSSSNLSRRIAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSES 116
           F GA LFWF+  S+  LSRR++G Q  S   S    AQVK       NL G    S S+ 
Sbjct: 61  FAGALLFWFSRASNPKLSRRLSGGQGSSSRASQSHIAQVKSCMQ---NLAGLPFGSQSKE 117

Query: 117 EYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIPPLDNVSSKVLAVPLDNAEIQ 176
           E+A  ++F K+SS  I RL+ E  +LH  +VLSLAAA++PPL+N+S KVLA+PL N ++Q
Sbjct: 118 EHAGQLLFAKISSFTIGRLWNEAERLHSCNVLSLAAALVPPLENISPKVLAMPLGNDDVQ 177

Query: 177 MHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEV 236
           + E   +  CEVE   C  LSFPDL+ TR AVEPRTGIEFPM+LD     EN SS TSEV
Sbjct: 178 VSEPTDQRYCEVEHSGCSGLSFPDLNWTRDAVEPRTGIEFPMLLD-----ENNSSLTSEV 232

Query: 237 LVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLRE 296
           LVGTGSRT+KI++IKSLKVYAF FYVHP SVCEKLGPKYAS+  +EL KC  FYEDLLRE
Sbjct: 233 LVGTGSRTMKIIRIKSLKVYAFGFYVHPNSVCEKLGPKYASVPASELKKCPDFYEDLLRE 292

Query: 297 DIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLG 356
           DI MTVRLV+N NG+K+N V+D FEKSLR RL+K NPNTDY+CL++FGS+F++DIP+P G
Sbjct: 293 DIVMTVRLVVNYNGLKINTVRDAFEKSLRNRLQKMNPNTDYNCLKTFGSFFTEDIPIPAG 352

Query: 357 TVINFRRTAAGQLITE 372
           T I+FRRT+ GQLITE
Sbjct: 353 TKIDFRRTSDGQLITE 368

Length = 415

>gnl|CDD|217029 pfam02431, Chalcone, Chalcone-flavanone isomerase

 Score =  111 bits (281), Expect = 3e-29
 Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 11/161 (6%)

Query: 216 FPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKY 275
           FP  +          S  S  L+G G R +  +  K +KVYA   Y+    V        
Sbjct: 1   FPPTI------SPPGSPKSLFLLGAGVRGVSFL-GKFIKVYAIGVYLAKSDVPSLASKWK 53

Query: 276 ASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNT 335
              S  EL +   F+ DLL   I+  +R+V   N +    ++D F +SL ARL+KA    
Sbjct: 54  GK-SAEELEESEDFFRDLLDGGIEKFIRIVPIRN-LDGKHLRDGFVESLVARLKKAGTYE 111

Query: 336 D--YHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITESE 374
           D     LE F   F     +P G+ I F R+  G L     
Sbjct: 112 DEEEEALEKFREAFKDKGSVPKGSSILFTRSPDGSLTISFS 152

Chalcone-flavanone isomerase is a plant enzyme responsible for the isomerisation of chalcone to naringenin, a key step in the biosynthesis of flavonoids. Length = 200

>gnl|CDD|215613 PLN03174, PLN03174, Chalcone-flavanone isomerase-related; Provisional

 Score =  106 bits (267), Expect = 1e-26
 Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 12/170 (7%)

Query: 194 GALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSL 253
            ++S  D S     VE +TG+ FP  +             S  L+G G R   I+ +K++
Sbjct: 66  ASISLADPSPPS-VVESKTGVSFPAEIG-----------DSRRLLGVGLRKKSILGLKNI 113

Query: 254 KVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKV 313
            VYAF  Y     + + LG KY  +S +EL     F +DL+  DI MTVRL I    + +
Sbjct: 114 DVYAFGVYADDDDLKKLLGEKYGKLSASELKGNKEFIDDLMEADIKMTVRLQIVYGKLSI 173

Query: 314 NAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRR 363
            +V+  FE+S+ +RL+K   + +   L+SF S F  +  +P G+VI+  R
Sbjct: 174 RSVRSAFEESVGSRLQKFGGSDNKELLQSFTSLFKDEYKIPKGSVIDLSR 223

Length = 278

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	374
PLN03175	415	hypothetical protein; Provisional	100.0
PLN02559	230	chalcone--flavonone isomerase	100.0
PLN02804	206	chalcone isomerase	100.0
PLN03174	278	Chalcone-flavanone isomerase-related; Provisional	100.0
PLN02311	271	chalcone isomerase	100.0
PF02431	199	Chalcone: Chalcone-flavanone isomerase; InterPro:	99.97

>PLN03175 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-122  Score=917.97  Aligned_cols=359  Identities=59%  Similarity=0.964  Sum_probs=351.3

Q ss_pred             eccCCCCCccCCcchhhhccccCccccc-----------CcccccCCchhHhHHHHhHhhhhcceeeeeecCCCCccchh
Q 017307            8 MDFNGGDPYILPTEFFLARSLGDHLFSQ-----------SSYPYVPGSLALQGAFNCISKFTGAFLFWFTSGSSSNLSRR   76 (374)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~g~~~~~~a~~~~~k~a~a~~~~~~~~~~~~~~~~   76 (374)
                      ||+||+++|.||+|++||||||++||+|           ||+||+|||+||||||+|++||||||||||||+|+||++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~   80 (415)
T PLN03175          1 SNLDHNSGYLFPIDSPLSHDLGLGLFSHVGTFVDNSLHQSRQICIPGSLAFQEAFSCISKFAGALLFWFSRASNPKLSRR   80 (415)
T ss_pred             CCCCCCCccccCCCcccccccccchhhcccccccCcccccceeecCccHHHHHHHHHHHHhhhheEEEeccCCCHHHHHH
Confidence            7899999999999999999999999998           49999999999999999999999999999999999999999


Q ss_pred             hcccCCCCccccccccccccccccccccccccccccCCCCccccchhhhhhhHHHHHHHHhhhcccccchhhhhhhhccC
Q 017307           77 IAGNQHGSKIGSYKSSAQVKQITSTGHNLTGFHLSSNSESEYACPVVFNKVSSSAIRRLFREGGKLHLSSVLSLAAAVIP  156 (374)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~la~a~~p  156 (374)
                      ++++++   ++|++|++|++||++|||||+||||||.+|+||++|++|++|||+||||||||+||+|||||||||||+||
T Consensus        81 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~a~~p  157 (415)
T PLN03175         81 LSGGQG---SSSRASQSHIAQVKSCMQNLAGLPFGSQSKEEHAGQLLFAKISSFTIGRLWNEAERLHSCNVLSLAAALVP  157 (415)
T ss_pred             HhcCCC---CCCchHHHhHHHhhhHhhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHhhccccHHHHHhhhCC
Confidence            999999   89999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcceeeeeccCcccccccCCCCCCcccccccCCCCCCCCCCCCcceeecCCCcccCCeecccccCCCCCCCCcee
Q 017307          157 PLDNVSSKVLAVPLDNAEIQMHESMGRSPCEVESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEV  236 (374)
Q Consensus       157 p~~~~s~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~  236 (374)
                      |||||||||||||++|+|+++||++||+|||++|++|+++++|+++|++.+|||+|||+||+.++     ++++++++++
T Consensus       158 ~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vEPkTgv~FP~~l~-----~~p~s~~sl~  232 (415)
T PLN03175        158 PLENISPKVLAMPLGNDDVQVSEPTDQRYCEVEHSGCSGLSFPDLNWTRDAVEPRTGIEFPMLLD-----ENNSSLTSEV  232 (415)
T ss_pred             CccccChhheeeeccCCCcccccccCCCcccccCcCCCccCcCcccccccccccCCCCcCCcccc-----CCCCCCCcee
Confidence            99999999999999999999999999999999999999999999999999999999999999995     4788888999


Q ss_pred             EEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChhhhcccchhHHHHhcCCcceEEEEEEeecccchhhH
Q 017307          237 LVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAV  316 (374)
Q Consensus       237 LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~EL~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~V  316 (374)
                      |+|+|+|+|+|+|+|+|||||||||+|+++++.+|++|||||+++||+++++||+||+++|++|+||+++++++++++.+
T Consensus       233 L~G~GvR~~eI~~~k~IKfyAiGVYle~~~v~~~L~~KwkGKsa~EL~~s~eFf~DIItap~~m~IRLVii~~gI~~sk~  312 (415)
T PLN03175        233 LVGTGSRTMKIIRIKSLKVYAFGFYVHPNSVCEKLGPKYASVPASELKKCPDFYEDLLREDIVMTVRLVVNYNGLKINTV  312 (415)
T ss_pred             eeecccceeEEEeeceeEEEEEEEEeccchHHHHHhhhhCCCcHHHHccCHHHHHHHHcCCccEEEEEEEecCCccHHHH
Confidence            99999999999988999999999999999889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCccHHHHHHHhcccCCCcCCCCCCEEEEEEcCCCcEEEEeC
Q 017307          317 KDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITESE  374 (374)
Q Consensus       317 rdAFekSLg~RLkk~~~daE~eALekFks~Fkddi~fpkGssI~Ft~sP~G~L~~ei~  374 (374)
                      ++|||+++++||+++++++|+++|++|.++|+++++||||++|+|+|+|+|.|+|+|+
T Consensus       313 ~~Afees~g~RLkkt~gdae~eAIeKF~s~F~~di~fpkGssI~Ft~sP~ggLtisIn  370 (415)
T PLN03175        313 RDAFEKSLRNRLQKMNPNTDYNCLKTFGSFFTEDIPIPAGTKIDFRRTSDGQLITEIG  370 (415)
T ss_pred             HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhcccccCCCCEEEEEEcCCCceEEEEC
Confidence            9999999999999999999999999999999779999999999999999999999885

>PLN02559 chalcone--flavonone isomerase

Probab=100.00  E-value=4.5e-43  Score=328.59  Aligned_cols=160  Identities=23%  Similarity=0.340  Sum_probs=141.5

Q ss_pred             CCCCcceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCCh
Q 017307          201 LSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISV  280 (374)
Q Consensus       201 ~~~~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa  280 (374)
                      ++++.++||   ||+||+.+      ++|+++++++|+|+|+|+|+|+| ++|||||||||||++++.. |++|||||++
T Consensus         2 ~~~~~v~ve---~i~FP~~v------~~p~s~~~l~L~GaG~Rg~eI~~-~~vKftAiGvYle~~av~~-L~~KWKGKsa   70 (230)
T PLN02559          2 PAVTEVQVE---GVTFPPSV------KPPGSSNPLFLGGAGVRGLEIQG-KFIKFTAIGVYLEGNAVPS-LAKKWKGKTA   70 (230)
T ss_pred             CccceEeEc---ceecCCcc------cCCCCCCceEEEeccccceEEee-EEEEEEEEEEEechhHHHH-HHHhhCCcCH
Confidence            467778899   99999999      57888899999999999999998 8999999999999998854 9999999999


Q ss_pred             hhhcccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhh--cCCCccHHHHHHHhcccCCCcCCCCCCE
Q 017307          281 AELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEK--ANPNTDYHCLESFGSYFSKDIPLPLGTV  358 (374)
Q Consensus       281 ~EL~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk--~~~daE~eALekFks~Fkddi~fpkGss  358 (374)
                      +||.++.+||+||+++|+||++|++|+. .+++.++++++++.+.+|++.  .|+|+|++||++|.++|+ +++||||++
T Consensus        71 ~EL~~~~~Ff~div~~p~EK~~rV~~I~-~l~G~qy~~kv~e~~~a~~ks~g~y~daE~~aLekF~~~Fk-~~~fp~Gs~  148 (230)
T PLN02559         71 EELADSVAFFRDVVTGDFEKFTRVTMIL-PLTGEQYSEKVTENCVAIWKSLGIYTDAEAKAVEKFKEAFK-EETFPPGSS  148 (230)
T ss_pred             HHHhcCHHHHHHHHcCcchhhEEEEEEE-eccccchHHHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhc-CCCCCCCCE
Confidence            9999999999999999999999999974 455555555555555555544  467899999999999999 689999999


Q ss_pred             EEEEEcCCCcEEEEe
Q 017307          359 INFRRTAAGQLITES  373 (374)
Q Consensus       359 I~Ft~sP~G~L~~ei  373 (374)
                      |+|||+|+|+|+|++
T Consensus       149 I~ft~sp~g~L~isf  163 (230)
T PLN02559        149 ILFTHSPTGSLTVAF  163 (230)
T ss_pred             EEEEECCCCcEEEEE
Confidence            999999999999976

>PLN02804 chalcone isomerase

Probab=100.00  E-value=1.1e-40  Score=309.54  Aligned_cols=152  Identities=24%  Similarity=0.361  Sum_probs=139.5

Q ss_pred             ceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChhhhcc
Q 017307          206 HAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNK  285 (374)
Q Consensus       206 ~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~EL~~  285 (374)
                      ++||   |++||+.++        +++++++|+|+|+|+|+|+| ++|||||||||+|++ ++.+| .||+||+++||++
T Consensus         4 ~~v~---~v~FP~~i~--------~ss~~l~L~G~G~R~~~I~~-~~iK~yAiGvYle~~-~~~~L-~kwkgk~a~EL~~   69 (206)
T PLN02804          4 VMVE---DIPFPPQIT--------TSSKPLSLLGHGITDIEIHF-LQIKFTAIGVYLEPS-VKGHL-QSWKGKPGSELAE   69 (206)
T ss_pred             EEec---CcCCCceee--------cCCCcceEEeecccceEEEe-EEEEEEEEEEEecHH-HHHHH-HHhcCCCHHHHhc
Confidence            5688   999999993        34578999999999999999 599999999999995 66668 5999999999999


Q ss_pred             cchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcC--CCccHHHHHHHhcccCCCcCCCCCCEEEEEE
Q 017307          286 CGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKAN--PNTDYHCLESFGSYFSKDIPLPLGTVINFRR  363 (374)
Q Consensus       286 ~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~--~daE~eALekFks~Fkddi~fpkGssI~Ft~  363 (374)
                      +.+||+||+++|+||++||+|++ .+++.++++++++++++||++.+  +++|++||++|.++|+ +++||||++|+|+|
T Consensus        70 ~~~Ff~dlv~~p~ek~~Ri~~i~-~l~g~qy~~~~ee~~~~rlk~~~~y~d~e~~aL~kf~~~Fk-~~~fp~Gs~I~ft~  147 (206)
T PLN02804         70 DDDFFQALIQAPVEKLIRIVVIK-EIKGSQYGVQLESSVRDRLAEDDKYEEEEEEALEKVVEFFQ-SKYFKKNSIITYHF  147 (206)
T ss_pred             CHHHHHHHHcCChhhEEEEEEEe-cCcCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHhC-CCcCCCCCEEEEEe
Confidence            99999999999999999999996 78999999999999999999986  6688999999999998 77999999999999


Q ss_pred             cC-CCcEEEEe
Q 017307          364 TA-AGQLITES  373 (374)
Q Consensus       364 sP-~G~L~~ei  373 (374)
                      +| +|.|+|.+
T Consensus       148 ~~~~g~l~Isf  158 (206)
T PLN02804        148 PATSGIVEISF  158 (206)
T ss_pred             cCCCCeEEEEE
Confidence            98 89998754

>PLN03174 Chalcone-flavanone isomerase-related; Provisional

Probab=100.00  E-value=2.1e-40  Score=319.16  Aligned_cols=158  Identities=35%  Similarity=0.593  Sum_probs=148.1

Q ss_pred             ceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChhhhcc
Q 017307          206 HAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNK  285 (374)
Q Consensus       206 ~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~EL~~  285 (374)
                      .+|||+|||+||++++      .     ...|+|+|+|+|+|+|+|+|||||+|||+|+++++++|++||+|++++||.+
T Consensus        77 ~~vEp~tGv~FP~~l~------~-----~~~LLGaGvR~k~i~glk~IKvYAiGlYl~~~~v~~~L~~k~kgks~~El~~  145 (278)
T PLN03174         77 SVVESKTGVSFPAEIG------D-----SRRLLGVGLRKKSILGLKNIDVYAFGVYADDDDLKKLLGEKYGKLSASELKG  145 (278)
T ss_pred             ceeccCCCCcCCCccc------C-----CCcceeeeeeeEEEeccceEEEEEEEEEechhHhHHHhhhhhcCCChhhhhc
Confidence            4799999999999994      2     1236799999999999999999999999999999999999999999999999


Q ss_pred             cchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcCCCccHHHHHHHhcccCCCcCCCCCCEEEEEEcC
Q 017307          286 CGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTA  365 (374)
Q Consensus       286 ~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~~daE~eALekFks~Fkddi~fpkGssI~Ft~sP  365 (374)
                      +.+||+||+++|++|++||+|+|++++.+.+++||++++++||+++.+++++++|++|.++|++++++|||++|+|+|+|
T Consensus       146 s~~f~~dil~~~~ek~iRL~iiy~~v~~~~v~~A~~esv~~rl~~~~~~e~~e~IekF~~~F~~~~~l~kGdvI~~~~~P  225 (278)
T PLN03174        146 NKEFIDDLMEADIKMTVRLQIVYGKLSIRSVRSAFEESVGSRLQKFGGSDNKELLQSFTSLFKDEYKIPKGSVIDLSREP  225 (278)
T ss_pred             CHHHHHHHHcCCCceEEEEEEEeccccHHHHHHHHHHHHHHhhhccCCcchHHHHHHHHHHHhccccCCCCCEEEEEEcC
Confidence            99999999999999999999999999999999999999999999988877788999999999988889999999999999


Q ss_pred             CCcEEEEeC
Q 017307          366 AGQLITESE  374 (374)
Q Consensus       366 ~G~L~~ei~  374 (374)
                      ++.|++.++
T Consensus       226 g~gl~vsi~  234 (278)
T PLN03174        226 GHVLRTTID  234 (278)
T ss_pred             CCeEEEEEC
Confidence            999999875

>PLN02311 chalcone isomerase

Probab=100.00  E-value=7.6e-39  Score=307.47  Aligned_cols=168  Identities=21%  Similarity=0.345  Sum_probs=154.2

Q ss_pred             ccCCCCCCCCCCCCcceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhh
Q 017307          191 HRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEK  270 (374)
Q Consensus       191 ~~~~~~~~p~~~~~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~  270 (374)
                      ..|+++++|...   .++||+|||+||+.++      .++++++|+|+|+|+|+|.|++ ++|||||+|+|+++++++. 
T Consensus        55 ~~~~~~~~~~~~---~~~ep~TgV~Fp~~v~------~~~~s~~L~LnGaGvR~K~I~~-~~vKVYA~GLYL~~~~~~~-  123 (271)
T PLN02311         55 VKSAAFSVGSAE---YAEETATSVKFQRSLT------LPGCSSPLSLLGTGYREKVFAI-IGVKVYAAGLYVNPSILSG-  123 (271)
T ss_pred             eeccccccCccc---ceecCCcCCcCCcccc------CCCCCCceeEeeeEEeeEEEee-eeEEEEEEEEEechhhhhh-
Confidence            468999999887   8899999999999994      5666789999999999999986 7999999999999997755 


Q ss_pred             hCCccCCCChhhhcccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcCCCccHHHHHHHhcccCCC
Q 017307          271 LGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKD  350 (374)
Q Consensus       271 L~~KwkGksa~EL~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~~daE~eALekFks~Fkdd  350 (374)
                      |+ ||+|++++||.++.+||+||+++|++|++||++. ++|+..++++||++++++|+++. +++|+++|++|+++|+ +
T Consensus       124 L~-kwkgk~a~eL~~~~~ff~dIi~a~~eK~irI~~i-R~v~g~~~~~A~~eg~~~rlk~~-~~~~~~aLekF~~~F~-~  199 (271)
T PLN02311        124 LS-AWKGRSADEIQRDSSLFSSIFQAPAEKSLQIVLV-RDVDGKTFWDALDEAISPRIKAP-SPDDTSALSTFRSIFQ-N  199 (271)
T ss_pred             Hh-hhcCCCHHHHhcchHHHHHHhcCCcceEEEEEEE-ecCCHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHhc-C
Confidence            88 9999999999999999999999999999999996 47999999999999999999654 6688899999999999 6


Q ss_pred             cCCCCCCEEEEEEcCCCcEEEEe
Q 017307          351 IPLPLGTVINFRRTAAGQLITES  373 (374)
Q Consensus       351 i~fpkGssI~Ft~sP~G~L~~ei  373 (374)
                      ++||||++|+|+|.|+|.+++.+
T Consensus       200 ~~l~kGd~I~~~~~p~~~~~v~~  222 (271)
T PLN02311        200 RSLNKGTVIFLTWINPSKMLVCI  222 (271)
T ss_pred             CCCCCCCEEEEEEeCCCceEEEE
Confidence            79999999999999998888875

>PF02431 Chalcone: Chalcone-flavanone isomerase; InterPro: IPR003466 Chalcone isomerase (5

Probab=99.97  E-value=1e-30  Score=237.92  Aligned_cols=148  Identities=30%  Similarity=0.499  Sum_probs=128.2

Q ss_pred             cCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChh-hhcccchhHHHHh
Q 017307          216 FPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVA-ELNKCGGFYEDLL  294 (374)
Q Consensus       216 FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~-EL~~~~dFf~dLi  294 (374)
                      ||.+++      .|.+.++++|+|+|+|+++|+   +|||||+|+|+++++++. +..+|.++.++ ++.++.+||++|+
T Consensus         1 FP~~i~------~p~~~~~l~L~G~GvR~~~~~---~ikVYavG~Yv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll   70 (199)
T PF02431_consen    1 FPKKIT------SPTSSEELSLLGAGVRTVSFL---NIKVYAVGLYVDDSDAKK-LLKKWKGKSASDDLEKSEDFFDDLL   70 (199)
T ss_dssp             EESEEE-------TTTSSEEEEEEEEEEEEEET---EEEEEEEEEEEECCHHHH-HHHHHTTT-HHHHHHT-HHHHHHHH
T ss_pred             CCCccc------CCCCCCCeEEEEEEEeeEEEE---EEEEEEEEEEEChhHhhh-HHHhhhcccCcccccccHHHHHHHh
Confidence            899994      566678999999999999996   689999999999999888 55589999887 9999999999999


Q ss_pred             cCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcC--CCccHHHHHHHhcccCCCcCCCCCCEEEEEEcCCCcEEEE
Q 017307          295 REDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKAN--PNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITE  372 (374)
Q Consensus       295 ~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~--~daE~eALekFks~Fkddi~fpkGssI~Ft~sP~G~L~~e  372 (374)
                      +++++|++||+++|+ ++.++++|||.+++.+|+++.+  .++++++|++|+++|+...++|||++|+|+|+|+|.|++.
T Consensus        71 ~~~~~k~iri~~~R~-~~~~~l~d~~~~~i~~r~~~~~~~~~~~~~~l~~f~~~F~~~g~~~kG~~i~l~~~~~g~l~v~  149 (199)
T PF02431_consen   71 DSPVEKAIRIVPVRN-VDGKHLRDAFIESIRPRLKAAGTEEEALEEALDEFKSLFKSKGSVPKGDVITLTWSPDGSLTVS  149 (199)
T ss_dssp             HSSS-EEEEEEESSS-EEHHHHHHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHHTTB-EE-TT-EEEEEEETTTEEEEE
T ss_pred             cCCccEEEEEEEEec-CCHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHhcccccccCCCEEEEEECCCCcEEEE
Confidence            999999999999975 9999999999999999999885  3577889999999998455999999999999999999988


Q ss_pred             eC
Q 017307          373 SE  374 (374)
Q Consensus       373 i~  374 (374)
                      ++
T Consensus       150 ~~  151 (199)
T PF02431_consen  150 YN  151 (199)
T ss_dssp             EE
T ss_pred             Ee
Confidence            73

5.1.6 from EC) also known as chalcone-flavanone isomerase, is a plant enzyme responsible for the isomerisation of chalcone to naringenin a key step in the biosynthesis of flavonoids. The Petunia hybrida (Petunia) genome contains two genes coding for very similar enzymes, ChiA and ChiB, but only the first seems to encode a functional chalcone isomerase. Chalcone isomerase has a core 2-layer alpha/beta structure consisting of beta(3)-alpha(2)-beta-alpha(2)-beta(3) []. This entry represents a subgroup of Chalcone isomerase.; GO: 0016872 intramolecular lyase activity, 0042398 cellular modified amino acid biosynthetic process; PDB: 1JX0_B 1JEP_A 1EYP_B 1JX1_B 1EYQ_B 1FM8_A 1FM7_A 4DOL_A 4DOI_A 4DOK_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	374
4doo_A	205	Crystal Structure Of Arabidopsis Thaliana Fatty-Aci		6e-17

>pdb|4DOO|A Chain A, Crystal Structure Of Arabidopsis Thaliana Fatty-Acid Binding Protein At3g63170 (Atfap1) Length = 205

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 207 AVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRS 266
            VEP+TG  FP            S   S  L+G G R   ++ +K++ VYAF  Y     
Sbjct: 5   VVEPKTGFSFPA-----------SIGDSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDD 53
Query: 267 VCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRA 326
           V + +G KYA++  +E+     F +DL+  DI MT+RL I    + + +V++ F++S+  
Sbjct: 54  VKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVGN 113
Query: 327 RLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRR 363
           RL+K   + +   L+SF S F  +  +P  + I+  +
Sbjct: 114 RLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTK 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	374
4doo_A	205	Chalcone-flavanone isomerase family protein; chalc	3e-41
4doi_A	246	Chalcone--flavonone isomerase 1; chalcone-flavanon	1e-33
1eyq_A	222	Chalcone-flavonone isomerase 1; chalcone isomerase	6e-32
4dok_A	208	Similarity to chalcone-flavonone isomerase; chalco	7e-30
4dol_A	217	AT1G53520, 94270-95700, chalcon; chalcone-isomeras	4e-28
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-10

>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana} Length = 205

 Score =  143 bits (361), Expect = 3e-41
 Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 11/167 (6%)

Query: 206 HAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPR 265
             VEP+TG  FP  + +           S  L+G G R   ++ +K++ VYAF  Y    
Sbjct: 4   SVVEPKTGFSFPASIGD-----------SRRLLGVGLRKKSLLGLKNIDVYAFGVYADCD 52

Query: 266 SVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLR 325
            V + +G KYA++  +E+     F +DL+  DI MT+RL I    + + +V++ F++S+ 
Sbjct: 53  DVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVG 112

Query: 326 ARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITE 372
            RL+K   + +   L+SF S F  +  +P  + I+  +     L   
Sbjct: 113 NRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVA 159

>4doi_A Chalcone--flavonone isomerase 1; chalcone-flavanone isomerase; 1.55A {Arabidopsis thaliana} Length = 246

 Score =  124 bits (312), Expect = 1e-33
 Identities = 34/187 (18%), Positives = 70/187 (37%), Gaps = 15/187 (8%)

Query: 188 VESHRCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKI 247
           + S    A   P  + T+  V+    + F   +      ++ +SS    L G G R + I
Sbjct: 1   MSSSNACASPSPFPAVTKLHVD---SVTFVPSV------KSPASSNPLFLGGAGVRGLDI 51

Query: 248 VKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVIN 307
            + K +       Y+   +V   L  K+   +  EL +   F+ +++    +  +++ + 
Sbjct: 52  -QGKFVIFTVIGVYLEGNAVPS-LSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTM- 108

Query: 308 CNGMKVNAVKDVFEKSLRARLEKANPNTD--YHCLESFGSYFSKDIPLPLGTVINFRRTA 365
              +      +   ++  A  ++    TD     +E F   F K+   P G+ I F  + 
Sbjct: 109 KLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIF-KEETFPPGSSILFALSP 167

Query: 366 AGQLITE 372
            G L   
Sbjct: 168 TGSLTVA 174

>1eyq_A Chalcone-flavonone isomerase 1; chalcone isomerase, flavonoid; HET: NAR; 1.85A {Medicago sativa} SCOP: d.36.1.1 PDB: 1eyp_A* 1fm7_A* 1fm8_A* 1jep_A* 1jx0_A* 1jx1_A* Length = 222

 Score =  119 bits (298), Expect = 6e-32
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 12/160 (7%)

Query: 212 TGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKL 271
             +E+P ++ +        +  S  L G G R + I +   +K  A   Y+   +V   L
Sbjct: 11  ENLEYPAVVTSP------VTGKSYFLGGAGERGLTI-EGNFIKFTAIGVYLEDIAVAS-L 62

Query: 272 GPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKA 331
             K+   S  EL +   FY D++    +  +R       +          ++  A L+  
Sbjct: 63  AAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSK-IRELSGPEYSRKVMENCVAHLKSV 121

Query: 332 NPNTD--YHCLESFGSYFSKDIPLPLGTVINFRRTAAGQL 369
               D     ++ F   F K +  P G  + +R++  G L
Sbjct: 122 GTYGDAEAEAMQKFAEAF-KPVNFPPGASVFYRQSPDGIL 160

>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana} Length = 208

 Score =  113 bits (283), Expect = 7e-30
 Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 212 TGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKL 271
             + FP  +          +S    L+G G   I+I     +K  A   Y+ P  V +  
Sbjct: 8   HEVPFPPQI---------ITSKPLSLLGQGITDIEI-HFLQVKFTAIGVYLDPSDV-KTH 56

Query: 272 GPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKA 331
              +   +  EL     F++ L   +++  +R+V+    +K        E ++R RL + 
Sbjct: 57  LDNWKGKTGKELAGDDDFFDALASAEMEKVIRVVV-IKEIKGAQYGVQLENTVRDRLAEE 115

Query: 332 NPNTD--YHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLITES 373
           +   +     LE    +F +       +VI +  +A   +    
Sbjct: 116 DKYEEEEETELEKVVGFF-QSKYFKANSVITYHFSAKDGICEIG 158

>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana} Length = 217

 Score =  108 bits (271), Expect = 4e-28
 Identities = 33/177 (18%), Positives = 72/177 (40%), Gaps = 12/177 (6%)

Query: 195 ALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLK 254
           + +    +   +A E  T ++F   +           S+   L+GTG R  K   I  +K
Sbjct: 2   SAASSVGNAEDYAEETATSVKFKRSV------TLPGCSSPLSLLGTGFRE-KKFAIIGVK 54

Query: 255 VYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVN 314
           VYA  +YV+   +       +   S  E+ +    +  + +   + ++++V+    +   
Sbjct: 55  VYAAGYYVNESILSGL--SAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVL-VRDVDGK 111

Query: 315 AVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRTAAGQLIT 371
              D  ++++  R+ K+  + D   L +F   F ++ PL  G+VI         ++ 
Sbjct: 112 TFWDALDEAISPRI-KSPSSEDTTALSTFCCIF-QNRPLNKGSVILLTWINTSNMLV 166

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.6 bits (146), Expect = 4e-10
 Identities = 54/341 (15%), Positives = 102/341 (29%), Gaps = 96/341 (28%)

Query: 90  KSSAQVKQITSTGHNLT-GFHLSSNSESEYACPVVFNKVSSSAIRRLFREG---GKLHLS 145
           K    V++       +   F L S  ++E   P +  ++      RL+ +     K ++S
Sbjct: 74  KQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132

Query: 146 S---VLSLAAAV--IPPLDNV-------SSK-VLAVP-LDNAEIQMHE-------SMGRS 184
                L L  A+  + P  NV       S K  +A+    + ++Q          ++   
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192

Query: 185 PCEVE-----SHRCGALSFPDLSRTRHAVEPRTGIE--------------FP---MILDN 222
                           +     SR+ H+   +  I               +    ++L N
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 223 VIDGE--NYSSSTSEVLVGT----------GSRTIKIVKIKSLKVYA-------FAFYVH 263
           V + +  N  + + ++L+ T           + T  I                    Y+ 
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 264 ------PRSVCEKLGPKYASISVAELNKCGGFYEDLLREDIDMTVR-LVINCNGMKVNAV 316
                 PR V     P+  SI +AE           +R+ +        +NC     + +
Sbjct: 313 CRPQDLPREVL-TTNPRRLSI-IAE----------SIRDGLATWDNWKHVNC-----DKL 355

Query: 317 KDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGT 357
             + E SL   LE   P       +   S F     +P   
Sbjct: 356 TTIIESSLNV-LE---PAEYRKMFDRL-SVFPPSAHIPTIL 391

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	374
4doo_A	205	Chalcone-flavanone isomerase family protein; chalc	100.0
4doi_A	246	Chalcone--flavonone isomerase 1; chalcone-flavanon	100.0
4dok_A	208	Similarity to chalcone-flavonone isomerase; chalco	100.0
1eyq_A	222	Chalcone-flavonone isomerase 1; chalcone isomerase	100.0
4dol_A	217	AT1G53520, 94270-95700, chalcon; chalcone-isomeras	100.0

>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}

Probab=100.00  E-value=6.2e-40  Score=299.68  Aligned_cols=159  Identities=31%  Similarity=0.560  Sum_probs=150.1

Q ss_pred             cceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChhhhc
Q 017307          205 RHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELN  284 (374)
Q Consensus       205 ~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~EL~  284 (374)
                      ..+|||+|||+||+.++           .+++|+|+|+|+|+|+|+|+|||||+|+|+++++++++|++||+|++++||+
T Consensus         3 ~~~vep~tgv~FP~~~~-----------~~~~L~G~GvR~~~i~~~~~ikvYa~GlYl~~~~~~~~L~~k~~~~~~~el~   71 (205)
T 4doo_A            3 ESVVEPKTGFSFPASIG-----------DSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIR   71 (205)
T ss_dssp             CCEECTTTCCEECSEET-----------TTEEEEEEEEEEEECSTTCEEEEEEEEEEEEHHHHHHHHHHHSTTCCHHHHH
T ss_pred             CccccCCcCCcCCCccC-----------CCceEEEeeeeEEEEeeccceEEEEEEEEeCHHHHHHHHHhhhcCCCHHHHc
Confidence            45899999999999994           1479999999999999888999999999999999998899999999999999


Q ss_pred             ccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcCCCccHHHHHHHhcccCCCcCCCCCCEEEEEEc
Q 017307          285 KCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRRT  364 (374)
Q Consensus       285 ~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~~daE~eALekFks~Fkddi~fpkGssI~Ft~s  364 (374)
                      ++.+||++|+++|++|++||+++|++++.+++++||++++++|+++...+++.++|++|+++|+++++||||++|+|+|+
T Consensus        72 ~~~~~~~~il~~~~~k~iri~~~~~~i~~~~~~da~~~~i~~~~~~~~~~~~~~~l~~f~~~F~~~~~~~kGd~i~~~~~  151 (205)
T 4doo_A           72 GNKSFMDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKD  151 (205)
T ss_dssp             TCTTHHHHHHHSCCCEEEEEEECCSCCCHHHHHHHHHHHHHHHHHHHSCSCCHHHHHHHHGGGTTCCCCCTTCEEEEEEE
T ss_pred             ccHHHHHHHHcCCCceEEEEEEEecCCCHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhccCCCCCCCCEEEEEEc
Confidence            99999999999999999999999878999999999999999999998887889999999999998889999999999999


Q ss_pred             CCCcEEEEeC
Q 017307          365 AAGQLITESE  374 (374)
Q Consensus       365 P~G~L~~ei~  374 (374)
                      |+|.|++.++
T Consensus       152 p~~~l~~~~~  161 (205)
T 4doo_A          152 PGHVLSVAIE  161 (205)
T ss_dssp             TTTEEEEEET
T ss_pred             CCCcEEEEEC
Confidence            9999998874

>4doi_A Chalcone--flavonone isomerase 1; chalcone-flavanone isomerase; 1.55A {Arabidopsis thaliana}

Probab=100.00  E-value=1.3e-39  Score=307.71  Aligned_cols=168  Identities=17%  Similarity=0.270  Sum_probs=147.1

Q ss_pred             cCCCCCCCCCCCCcceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhh
Q 017307          192 RCGALSFPDLSRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKL  271 (374)
Q Consensus       192 ~~~~~~~p~~~~~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L  271 (374)
                      .|.++.. .++.+...||   ||+||++++      .|++.++|+|+|+|+|+|+|++ ++|||||+|||+|+++ ..+|
T Consensus         6 ~~~~~~~-~~~~~~v~V~---gV~FP~~v~------~p~~~~~L~L~GaGvR~k~I~~-~~vKvYAiGlYl~~~~-~~~L   73 (246)
T 4doi_A            6 ACASPSP-FPAVTKLHVD---SVTFVPSVK------SPASSNPLFLGGAGVRGLDIQG-KFVIFTVIGVYLEGNA-VPSL   73 (246)
T ss_dssp             ----------CCCCEEET---TEEECSEEE------CTTTCCEEEEEEEEEEEEEETT-EEEEEEEEEEEECTTH-HHHH
T ss_pred             ccccCCC-CCccceeEEC---ceECCCeec------cCCCCCceeEecceeeceeeee-eEEEEEEEEEEechhH-HHHh
Confidence            3444443 4577888899   999999994      6677889999999999999997 6899999999999985 5569


Q ss_pred             CCccCCCChhhhcccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcC--CCccHHHHHHHhcccCC
Q 017307          272 GPKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKAN--PNTDYHCLESFGSYFSK  349 (374)
Q Consensus       272 ~~KwkGksa~EL~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~--~daE~eALekFks~Fkd  349 (374)
                      ++||+|++++||.++.+||+||+++|++|++||+|++ .|+.+++++||++++++|+++++  +++|+++|++|+++|+ 
T Consensus        74 ~~kwkgk~~~eL~~~~~ff~~il~~p~eK~lrl~~ir-~l~g~~~~~al~e~l~~rlk~~g~~~~~e~~aL~~F~~~F~-  151 (246)
T 4doi_A           74 SVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKL-PLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFK-  151 (246)
T ss_dssp             HHHHTTCCHHHHHHCHHHHHHHHHCSSCEEEEEEESS-CEEHHHHHHHHTTTHHHHHHHHTCCCHHHHHHHHHHHHHHT-
T ss_pred             hhhhcCCCHHHhcccHHHHHHHHcCCcceEEEEEEEe-cCCHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHhc-
Confidence            9999999999999999999999999999999999996 69999999999999999998854  5578899999999999 


Q ss_pred             CcCCCCCCEEEEEEcCCCcEEEEe
Q 017307          350 DIPLPLGTVINFRRTAAGQLITES  373 (374)
Q Consensus       350 di~fpkGssI~Ft~sP~G~L~~ei  373 (374)
                      +++||||++|+|+|+|+|.|+|++
T Consensus       152 ~~~l~kGs~I~~~~~p~g~l~i~~  175 (246)
T 4doi_A          152 EETFPPGSSILFALSPTGSLTVAF  175 (246)
T ss_dssp             TCEECTTCEEEEEECTTSEEEEEE
T ss_pred             cCcCCCCCEEEEEEeCCCcEEEEE
Confidence            678999999999999999999876

>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}

Probab=100.00  E-value=1.8e-38  Score=293.13  Aligned_cols=154  Identities=21%  Similarity=0.301  Sum_probs=141.9

Q ss_pred             CcceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChhhh
Q 017307          204 TRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAEL  283 (374)
Q Consensus       204 ~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~EL  283 (374)
                      +.+.||   ||+||+.++         +.++|+|+|+|+|+|+|++ ++|||||+|+|+|+++++.+| .||+|++++||
T Consensus         3 ~~~~v~---gv~FP~~~~---------~~~~L~L~GaGvR~~~I~~-~~iKvYa~GlYl~~~~~~~~l-~kwk~~~~~eL   68 (208)
T 4dok_A            3 GMVMVH---EVPFPPQII---------TSKPLSLLGQGITDIEIHF-LQVKFTAIGVYLDPSDVKTHL-DNWKGKTGKEL   68 (208)
T ss_dssp             CCEEET---TEEECSEEE---------SSSEEEEEEEEEEEEEETT-EEEEEEEEEEEECHHHHHHHC-GGGTTCCHHHH
T ss_pred             ccEEEc---cEECCcccc---------CCCcceeeeeeeeeEeeee-eEEEEEEEEEEecHHHHHHHH-hhhcCCCHHHH
Confidence            455688   999999993         3468999999999999987 689999999999998899988 89999999999


Q ss_pred             cccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcCC--CccHHHHHHHhcccCCCcCCCCCCEEEE
Q 017307          284 NKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANP--NTDYHCLESFGSYFSKDIPLPLGTVINF  361 (374)
Q Consensus       284 ~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~~--daE~eALekFks~Fkddi~fpkGssI~F  361 (374)
                      .++.+||+||+++|++|++||+|.+ .++.+++++||++++++|+++.+.  ++|+++|++|+++|+ +++||||++|+|
T Consensus        69 ~~~~~f~~~ii~~p~eK~iri~~ir-~l~g~~~~~a~~e~~~~~~~~~~~~~~~e~~aL~~f~~~F~-~~~~~~G~~I~~  146 (208)
T 4dok_A           69 AGDDDFFDALASAEMEKVIRVVVIK-EIKGAQYGVQLENTVRDRLAEEDKYEEEEETELEKVVGFFQ-SKYFKANSVITY  146 (208)
T ss_dssp             HTCHHHHHHHHHSSSCEEEEEEESS-CEEHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHH-TCEECTTCEEEE
T ss_pred             ccchHHHHHHhcCcccceEEEEEEe-cCCcHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHhc-cCCCCCCCEEEE
Confidence            9999999999999999999999996 699999999999999999998865  578899999999999 679999999999


Q ss_pred             EEcCC-CcEEEEe
Q 017307          362 RRTAA-GQLITES  373 (374)
Q Consensus       362 t~sP~-G~L~~ei  373 (374)
                      +|+|+ |+|+|++
T Consensus       147 ~~~p~~G~L~i~~  159 (208)
T 4dok_A          147 HFSAKDGICEIGF  159 (208)
T ss_dssp             EECSSSCCEEEEE
T ss_pred             EEeCCCCeEEEEE
Confidence            99988 9998764

>1eyq_A Chalcone-flavonone isomerase 1; chalcone isomerase, flavonoid; HET: NAR; 1.85A {Medicago sativa} SCOP: d.36.1.1 PDB: 1eyp_A* 1fm7_A* 1fm8_A* 1jep_A* 1jx0_A* 1jx1_A*

Probab=100.00  E-value=8.1e-37  Score=283.98  Aligned_cols=158  Identities=22%  Similarity=0.324  Sum_probs=142.5

Q ss_pred             CCCcceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChh
Q 017307          202 SRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVA  281 (374)
Q Consensus       202 ~~~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~  281 (374)
                      +.+...|+   ||+||++++      .|++.++|+|+|+|+|+|.|++ ++|||||+|+|+++++++ +|+.||+|++++
T Consensus         4 ~~~~v~v~---gv~FP~~~~------~p~~~~~L~L~GaGvR~k~i~~-~~iKvYa~GlYl~~~~~~-~L~~k~kg~~a~   72 (222)
T 1eyq_A            4 SITAITVE---NLEYPAVVT------SPVTGKSYFLGGAGERGLTIEG-NFIKFTAIGVYLEDIAVA-SLAAKWKGKSSE   72 (222)
T ss_dssp             CCCCEEET---TEEECSEEE------CTTTCCEEEEEEEEEEEEEETT-EEEEEEEEEEEEETTHHH-HHHHHHTTCCHH
T ss_pred             ccccEEEc---ceECCCccc------cCCCCCceEEeeeEEEEEEeec-eEEEEEEEEEEeCHHHhh-HhhhhhcCCCHH
Confidence            45555566   999999994      5666789999999999999987 899999999999997654 599999999999


Q ss_pred             hhcccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcC--CCccHHHHHHHhcccCCCcCCCCCCEE
Q 017307          282 ELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKAN--PNTDYHCLESFGSYFSKDIPLPLGTVI  359 (374)
Q Consensus       282 EL~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~--~daE~eALekFks~Fkddi~fpkGssI  359 (374)
                      ||.++.+||++|+++|++|++||++++ +|+..++++||++++++|+++.+  +++|.++|++|+++|+ +.+||||++|
T Consensus        73 el~~~~~f~~~li~~~~~k~irl~~i~-~v~g~~~~~a~~e~~~~~~~~~g~~~~~e~~~L~~f~~~F~-~~~~~kG~~i  150 (222)
T 1eyq_A           73 ELLETLDFYRDIISGPFEKLIRGSKIR-ELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFK-PVNFPPGASV  150 (222)
T ss_dssp             HHHTCHHHHHHHHHCSSCEEEEEEESS-CEEHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-TCEECTTCEE
T ss_pred             HhcccHHHHHHHHcCCCceEEEEEEEe-CCCHHHHHHHHHHHHHHHHhccCccccchHHHHHHHHHHhC-CCCCCCCCEE
Confidence            999999999999999999999999996 69999999999999999998764  5577889999999998 6679999999


Q ss_pred             EEEEcCCCcEEEE
Q 017307          360 NFRRTAAGQLITE  372 (374)
Q Consensus       360 ~Ft~sP~G~L~~e  372 (374)
                      +|+|+|+|.|+++
T Consensus       151 ~~~~~p~g~l~is  163 (222)
T 1eyq_A          151 FYRQSPDGILGLS  163 (222)
T ss_dssp             EEEEETTTEEEEE
T ss_pred             EEEEcCCCceEEE
Confidence            9999999999875

>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana}

Probab=100.00  E-value=2.1e-35  Score=271.26  Aligned_cols=158  Identities=20%  Similarity=0.364  Sum_probs=144.4

Q ss_pred             CcceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChhhh
Q 017307          204 TRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAEL  283 (374)
Q Consensus       204 ~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~EL  283 (374)
                      .+++|||+|||+||++++      .+++.++++|+|+|+|+|.|.+ ++|||||+|+|++++++++ |+ ||+|++++||
T Consensus        11 ~~~v~e~~tgv~fp~~~~------~~~~~~~l~L~G~GvR~~~i~~-~~ikvYa~glYl~~~~~~~-L~-~~~~~~~~el   81 (217)
T 4dol_A           11 EDYAEETATSVKFKRSVT------LPGCSSPLSLLGTGFREKKFAI-IGVKVYAAGYYVNESILSG-LS-AWTGRSADEI   81 (217)
T ss_dssp             CCEEECTTTCCEEESEEC------CTTCSSCEEEEEEEEEEEESSS-SEEEEEEEEEEECGGGTGG-GG-GGTTCCHHHH
T ss_pred             cceeecCCCCccCCCccc------CCCCCCceEEEEEEEEEEEEee-eEEEEEEEEEEcCHHHHHH-HH-hhcCCCHHHH
Confidence            447999999999999994      5566689999999999999876 6999999999999997765 88 9999999999


Q ss_pred             cccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcCCCccHHHHHHHhcccCCCcCCCCCCEEEEEE
Q 017307          284 NKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFSKDIPLPLGTVINFRR  363 (374)
Q Consensus       284 ~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~~daE~eALekFks~Fkddi~fpkGssI~Ft~  363 (374)
                      +++.+||++|+++|++|++||++.++ ++.+++++|+++++.+|+++... ++.++|++|+++|+ ++++|||++|+|+|
T Consensus        82 ~~~~~~~~~il~~~~~k~lri~~~R~-i~~~~l~~a~~e~i~~~~~~~~~-~~~~~l~~f~~~F~-d~~v~kGd~i~~~~  158 (217)
T 4dol_A           82 QRDSSLFVSIFQAQAEKSLQIVLVRD-VDGKTFWDALDEAISPRIKSPSS-EDTTALSTFCCIFQ-NRPLNKGSVILLTW  158 (217)
T ss_dssp             HTCHHHHHHHHHSSSCEEEEEEESSC-BCHHHHHHHHHHHHTTTCSSCCH-HHHHHHHHHHHHHT-TCCBCTTCEEEEEE
T ss_pred             cccHHHHHHHHcCCCceEEEEEEEec-CCHHHHHHHHHHHHHHHHHhcch-hHHHHHHHHHHHhC-CCcCCCCCEEEEEE
Confidence            99999999999999999999999974 99999999999999999987653 77889999999999 56899999999999


Q ss_pred             cCCCcEEEEe
Q 017307          364 TAAGQLITES  373 (374)
Q Consensus       364 sP~G~L~~ei  373 (374)
                      +|+|.|++.+
T Consensus       159 ~p~~~l~i~~  168 (217)
T 4dol_A          159 INTSNMLVSV  168 (217)
T ss_dssp             EETTEEEEEE
T ss_pred             cCCCCEEEEE
Confidence            9999998876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	374
d1eyqa_	212	d.36.1.1 (A:) Chalcone isomerase {Alfalfa (Medicag	4e-26

>d1eyqa_ d.36.1.1 (A:) Chalcone isomerase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 212

class: Alpha and beta proteins (a+b)
fold: Chalcone isomerase
superfamily: Chalcone isomerase
family: Chalcone isomerase
domain: Chalcone isomerase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

 Score =  101 bits (254), Expect = 4e-26
 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 12/159 (7%)

Query: 213 GIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLG 272
            +E+P ++       +  +  S  L G G R + I +   +K  A   Y+   +V   L 
Sbjct: 9   NLEYPAVV------TSPVTGKSYFLGGAGERGLTI-EGNFIKFTAIGVYLEDIAV-ASLA 60

Query: 273 PKYASISVAELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKAN 332
            K+   S  EL +   FY D++    +  +R       +          ++  A L+   
Sbjct: 61  AKWKGKSSEELLETLDFYRDIISGPFEKLIRGSK-IRELSGPEYSRKVMENCVAHLKSVG 119

Query: 333 PNTDYH--CLESFGSYFSKDIPLPLGTVINFRRTAAGQL 369
              D     ++ F   F K +  P G  + +R++  G L
Sbjct: 120 TYGDAEAEAMQKFAEAF-KPVNFPPGASVFYRQSPDGIL 157

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	374
d1eyqa_	212	Chalcone isomerase {Alfalfa (Medicago sativa) [Tax	100.0

>d1eyqa_ d.36.1.1 (A:) Chalcone isomerase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a+b)
fold: Chalcone isomerase
superfamily: Chalcone isomerase
family: Chalcone isomerase
domain: Chalcone isomerase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=100.00  E-value=2.1e-35  Score=268.81  Aligned_cols=159  Identities=21%  Similarity=0.313  Sum_probs=144.8

Q ss_pred             CCCcceeecCCCcccCCeecccccCCCCCCCCceeEEeeeeeeeEEeeeeceEEEEEEEEeCcchhhhhhCCccCCCChh
Q 017307          202 SRTRHAVEPRTGIEFPMILDNVIDGENYSSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVA  281 (374)
Q Consensus       202 ~~~~~vVEPkTGI~FP~~Lt~~~~g~~~ss~~sL~LvGaGvR~k~I~gik~IKVYAiGvYld~~avk~~L~~KwkGksa~  281 (374)
                      +.+.+.||   ||+||.+++      .++++++++|+|+|+|+|+|.+ ++|||||+|+|++++++.. |..+|+|++++
T Consensus         1 ~~~~v~v~---~v~fP~~i~------~~~~~~~l~L~G~GvR~~~i~~-~~ikvYa~GlYl~~~~~~~-l~~~~~~k~~~   69 (212)
T d1eyqa_           1 SITAITVE---NLEYPAVVT------SPVTGKSYFLGGAGERGLTIEG-NFIKFTAIGVYLEDIAVAS-LAAKWKGKSSE   69 (212)
T ss_dssp             CCCCEEET---TEEECSEEE------CTTTCCEEEEEEEEEEEEEETT-EEEEEEEEEEEEETTHHHH-HHHHHTTCCHH
T ss_pred             CcceEEEC---CccCCCccc------CCCCCCceEEeeeEEeeEEEee-eEEEEEEEEEEcccchhHH-Hhhhhcccchh
Confidence            35677889   999999994      5666789999999999999976 7999999999999998876 88899999999


Q ss_pred             hhcccchhHHHHhcCCcceEEEEEEeecccchhhHHHHHHHHHHHHHhhcCCC--ccHHHHHHHhcccCCCcCCCCCCEE
Q 017307          282 ELNKCGGFYEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPN--TDYHCLESFGSYFSKDIPLPLGTVI  359 (374)
Q Consensus       282 EL~~~~dFf~dLi~~~~ektIRLVi~ys~Vs~~~VrdAFekSLg~RLkk~~~d--aE~eALekFks~Fkddi~fpkGssI  359 (374)
                      ||.++.+||++|++++++|++||+++| +|+.+++++||++++.+|+++..+.  ++.++|++|+++|+ +.++|||+.|
T Consensus        70 el~~~~~~~~~il~~~~~k~iriv~vr-~v~~~~l~dal~e~l~~r~~~~~~~~~~~~~~l~~f~~~F~-~~~~~kG~~i  147 (212)
T d1eyqa_          70 ELLETLDFYRDIISGPFEKLIRGSKIR-ELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFK-PVNFPPGASV  147 (212)
T ss_dssp             HHHTCHHHHHHHHHCSSCEEEEEEESS-CEEHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-TCEECTTCEE
T ss_pred             hhhccHHHHHHHhcCCcceEEEEEEEe-cCCHHHHHHHHHHHHHHHHhccCcccchhHHHHHHHHHHhc-CCccCCCCEE
Confidence            999999999999999999999999997 5999999999999999999987654  45678999999999 6789999999


Q ss_pred             EEEEcCCCcEEEEe
Q 017307          360 NFRRTAAGQLITES  373 (374)
Q Consensus       360 ~Ft~sP~G~L~~ei  373 (374)
                      +|+|.|+|.|.+.+
T Consensus       148 ~~~~~p~g~l~vs~  161 (212)
T d1eyqa_         148 FYRQSPDGILGLSF  161 (212)
T ss_dssp             EEEEETTTEEEEEE
T ss_pred             EEEECCCCcEEEEE
Confidence            99999999999864