Citrus Sinensis ID: 017335

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
Protein Sequence
MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPNSDSAGLLVFL
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEcccccccHHHHHcccccccccccEEccccccEEEEEEcccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccEEEEEccEEEEcccccccccEEEEcccccccccEEEEEcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEcccccHHHHHHccccEEEcccccccccHHHHHHHHHcccccEEEEccccHHHHHHHHHHccccccEEEEEccccccccEEEcccccccccEEEEEEcccccccccHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEccHHHHHHHccccccccccccEcccccEEEEEEEEcccccccccccEEEEcccccccccHHHHcccccccccccccccHHHcccccccEEEcccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHcccccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mnnksaspkagkvIRCKAaicripgkplvieeieveppkAWEIRIKILCTSlchsdvtfwksstdlpklplpvifgheAVGVVESVGEYVEEVKerdlvlpifhrdcgecrdckssksntcskfgrgyrpnmprdgtsRFRELKGDvihhflnissfteysvVDIThvvkitphipLGIACLLscgvstgvGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRaskiigvdinpekfeigkkfgitdfinpatcgdkTVSQVIKEMTDGGADYCFECIGLTSVMndafnssregwgKTVILGVEmhgspislnsIEILKgrsvcgtyfgglkprsdIATLAQKYLDKvhlrssfhlcdpnsdsagllvfl
Flexible Loop (DISEMBL)
mnnksaspkagkvirckaaicripgkplvieeIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIfhrdcgecrdckssksntcskfgrgyrpnmprdgTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNraskiigvdinpeKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSfhlcdpnsdsagllvfl
Low Complexity Region (SEG)
MNNKSASPKAGKVIRCKAAICRIPGKPLvieeieveppKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFgheavgvvesvgeyveevkeRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFglgavglavaegaRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPNSDSAGLLVFL
Disordered region (IsUnstruct)
***********KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDC**************************FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCD************
Disordered Region (DISOPRED)
**************RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPNSDSAGLLVFL
Disordered Region (DISEMBL)
***********KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPNSDSAGLLVFL
Disordered Region (DISPRO)
**********GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPNSDSAGLLVFL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPNSDSAGLLVFL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	373	2.2.26 [Sep-21-2011]
Q9SK87	386	Alcohol dehydrogenase-lik	yes	no	0.922	0.891	0.650	1e-127
Q9SK86	388	Alcohol dehydrogenase-lik	no	no	0.954	0.917	0.617	1e-125
Q0V7W6	389	Alcohol dehydrogenase-lik	no	no	0.908	0.871	0.627	1e-122
Q9FH04	390	Alcohol dehydrogenase-lik	no	no	0.924	0.884	0.593	1e-115
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.916	0.895	0.514	3e-92
Q8LEB2	381	Alcohol dehydrogenase-lik	no	no	0.919	0.900	0.494	6e-90
P93629	381	Alcohol dehydrogenase cla	N/A	no	0.906	0.887	0.492	3e-89
A2XAZ3	381	Alcohol dehydrogenase cla	N/A	no	0.941	0.921	0.487	3e-89
A1L4Y2	394	Alcohol dehydrogenase-lik	no	no	0.908	0.860	0.494	4e-89
Q0DWH1	381	Alcohol dehydrogenase cla	no	no	0.941	0.921	0.485	6e-89

>sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1

 Score =  456 bits (1174), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/346 (65%), Positives = 274/346 (79%), Gaps = 2/346 (0%)

Query: 6   ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
           AS   GK IRCKAAI R  G+PLVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFWK  + 
Sbjct: 4   ASITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG 63

Query: 66  LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
            P    P I GHEAVGVVES+GE V+  K+ D+VLP+FH  C EC++C S KSN C+K+ 
Sbjct: 64  -PLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYT 122

Query: 126 RGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
             Y  N  R G TSRF++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLS
Sbjct: 123 NDYLSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLS 182

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
           C V+TG+GAAWKVA VE GSTV IFGLGAVGLAVAEG RL  A+KIIGVD+NP KFEIGK
Sbjct: 183 CSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGK 242

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
           +FGITDF+NPA CG+KT+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++L
Sbjct: 243 RFGITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVL 302

Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           G+E    PISL S ++L+GR+VCGT FGGLKP+ DI  L  +YL K
Sbjct: 303 GMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKK 348

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1

 Score =  447 bits (1149), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/358 (61%), Positives = 273/358 (76%), Gaps = 2/358 (0%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M+    S   GK I CKAAICR  G+ LVIE+I V+PP+A+E+RIKILCTSLCH+D+TFW
Sbjct: 1   MDKTFFSSNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFW 60

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           K S   P    P I GHEAVGVVES+GE V+  K+ D+VLP+FH  C EC+DCKSSK+N 
Sbjct: 61  KLSFG-PISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNW 119

Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
           C ++   +  N  R G  SRF++  G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+  
Sbjct: 120 CDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
           A LLSCGVSTG+GAAWKVA VE GST+AIFGLGAVGLAVAEGARL  A+KIIG+D N +K
Sbjct: 180 AALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDK 239

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
           FE+GKKFG TDFINP  CG+K +S+VIKEMT+GG DY FEC+GL S++N+AF S+R G G
Sbjct: 240 FELGKKFGFTDFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTG 299

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSF 357
           KTV+LG+E H +PISL S ++L+GR +CG+ FGGLK + DI  L   YL K     SF
Sbjct: 300 KTVMLGMEKHAAPISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSF 357

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1

 Score =  437 bits (1124), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/341 (62%), Positives = 267/341 (78%), Gaps = 2/341 (0%)

Query: 11  GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           GK IRCKAA+ R PG+ LVIEEI V+PP+A+E+RIKI+CTSLCH+DV+F K  +  P   
Sbjct: 12  GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSG-PLAR 70

Query: 71  LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
            P I GHEAVGV+ES+GE+V   ++ D+VLP+FH  C ECRDCKSSKSN C++F   +  
Sbjct: 71  FPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLS 130

Query: 131 NMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
           N  R G TSRF++  G+ I+HFL +SSF+EY+VVDI H+VKI+P IP+  A LLSCGVST
Sbjct: 131 NTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVST 190

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G+GAAWKVA VE GSTVA+FGLGAVGLAV EGARL  A KIIGVD+NPEKFE+GKKFG T
Sbjct: 191 GIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFT 250

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           DFIN   CG+  +S+VIKEMT GG DY FEC+GL S++ +AF+S+R G GKTV+LG++ H
Sbjct: 251 DFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKH 310

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
            +P+SL S ++L+GR VCG+ FGGLKP+ DI  L   YL K
Sbjct: 311 LTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKK 351

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1

 Score =  414 bits (1064), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/349 (59%), Positives = 263/349 (75%), Gaps = 4/349 (1%)

Query: 2   NNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK 61
           N+ S +  + K IRCKAA+ R  G+PLV+EEI V PP+ +E+RI+I+CT+LCHSDVTFWK
Sbjct: 5   NSSSDNKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWK 64

Query: 62  SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC 121
               +P    P I GHEA+GVVESVGE V+EV E D VLP F  DCG+C DCKS KSN C
Sbjct: 65  --LQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLC 122

Query: 122 SKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
           SKF     P MPR D +SRF +L G+ + HFLN+SSF+EY+V+D+ +VVKI   IP   A
Sbjct: 123 SKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRA 182

Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
           CLLSCGVSTGVGAAW+ A VE GSTV IFGLG++GLAVAEGARL  AS+IIGVDINP KF
Sbjct: 183 CLLSCGVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKF 242

Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
           ++G+KFG+T+F+N  TC    VS+VI EMTDGGADYCFEC+G +S++ +A+   R+GWGK
Sbjct: 243 QVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGK 302

Query: 301 TVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYL 348
           T+ LGV+  GS I L+S ++L  G+ + G+ FGGLK ++ I  L ++YL
Sbjct: 303 TITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYL 351

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  339 bits (869), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 178/346 (51%), Positives = 226/346 (65%), Gaps = 4/346 (1%)

Query: 6   ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
           +S  AG+VIRCKAA+    GKPLVIEE+EV PP+  E+R+KIL TSLCH+DV FW++   
Sbjct: 2   SSNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQ 61

Query: 66  LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
            P  P   IFGHEA G+VESVGE V ++K  D VLP+F  +C +CR CKS +SN C    
Sbjct: 62  TPLFPR--IFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLR 119

Query: 126 -RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
               R  M  DG +RF +  G  I+HF+  S+F+EY+V     V KI P  PL   C+LS
Sbjct: 120 INTDRGVMIHDGQTRFSK-DGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLS 178

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
           CG+STG+GA   VA    GSTVAIFGLGAVGLA AEGAR+  AS+IIGVD+NP +F   K
Sbjct: 179 CGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAK 238

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
           KFG+T+F+NP   GDK V QVI EMTDGG D   EC G  + M  AF    +GWG  V++
Sbjct: 239 KFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLV 298

Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           GV         + + +L  R++ GT+FG  KP+SDI ++  KY+ K
Sbjct: 299 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKK 344

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2

 Score =  331 bits (848), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 231/350 (66%), Gaps = 7/350 (2%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M+  S+S +  +VI C AA+    G+PLV+EE+EV PP+  EIRIK++CTSLC SD++ W
Sbjct: 1   MSASSSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAW 60

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           +S + LP+     IFGHEA G+VES+GE V E ++ D VL +F  +CG CR C S KSN 
Sbjct: 61  ESQSLLPR-----IFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNM 115

Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
           C   G   +  M  D  +RF  +KG  ++H+  +SSF+EY+VV     VK+ P  PL   
Sbjct: 116 CQVLGMERKGLMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKI 174

Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
           CLLSCGV+ G+GAAW VA V+ GS+V IFGLG VGL+VA+GA+L  A++I+GVDINP K 
Sbjct: 175 CLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKA 234

Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
           E  K FG+TDFIN     +  + QVIK MT GGAD+ FEC+G T +   A  S  +GWG 
Sbjct: 235 EQAKTFGVTDFINSNDLSEP-IPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGM 293

Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           TV LGV      +S +    L G+S+ GT FGG KP+SD+ +L  KY++K
Sbjct: 294 TVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNK 343

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P93629|ADHX_MAIZE Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1

 Score =  328 bits (842), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 172/349 (49%), Positives = 225/349 (64%), Gaps = 11/349 (3%)

Query: 6   ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
           ASP  G+VI CKAA+   P KPLVIE+++V PP+A E+R+KIL T+LCH+D   W  S  
Sbjct: 2   ASPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTW--SGK 59

Query: 66  LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF- 124
            P+   P I GHEA G+VESVGE V +V+  D V+P +  +C EC+ CKS K+N C K  
Sbjct: 60  DPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVR 119

Query: 125 ---GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181
              G G    M  D  SRF  + G  I+HF+  S+F++Y+VV    V KI P  PL   C
Sbjct: 120 SATGVGV---MMNDMKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVC 175

Query: 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
           LL CGV TG+GA W  A VE GS VA+FGLG VGLAVAEGA+   AS++IG+DI+ +KF+
Sbjct: 176 LLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFD 235

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKT 301
           + K FG+T+F+NP    DK + QV+ ++TDGG DY FECIG  S+M  A   S +GWG +
Sbjct: 236 VAKNFGVTEFVNPKE-HDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTS 294

Query: 302 VILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           VI+GV   G  IS    +++ GR   GT FGG K R+ +  L  KY+ K
Sbjct: 295 VIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKK 343

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1

 Score =  328 bits (842), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 179/367 (48%), Positives = 231/367 (62%), Gaps = 16/367 (4%)

Query: 6   ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
           AS   G+VI CKAA+     KP+ IE+++V PP+A E+R+KIL T+LCH+D   W  S  
Sbjct: 2   ASSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTW--SGK 59

Query: 66  LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF- 124
            P+   P I GHEA G+VESVGE V EV+  D V+P +  +C EC+ CKS K+N C K  
Sbjct: 60  DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR 119

Query: 125 ---GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181
              G G    M  D  SRF  + G  I+HF+  S+F++Y+VV    V KI P  PL   C
Sbjct: 120 AATGVGV---MMNDRKSRF-SINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVC 175

Query: 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
           LL CGVSTG+GA W  A VE GS VAIFGLG VGLAVAEGA+   AS+IIG+DI+ +KF+
Sbjct: 176 LLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFD 235

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKT 301
           + K FG+T+F+NP    DK + QVI ++TDGG DY FECIG  SVM  A     +GWG +
Sbjct: 236 VAKNFGVTEFVNPKD-HDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTS 294

Query: 302 VILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK-----VHLRSS 356
           VI+GV   G  IS    +++ GR   GT FGG K RS +  L +KYL+K      ++  S
Sbjct: 295 VIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHS 354

Query: 357 FHLCDPN 363
            +L D N
Sbjct: 355 MNLTDIN 361

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|A1L4Y2|ADHL3_ARATH Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1

 Score =  328 bits (841), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 230/350 (65%), Gaps = 11/350 (3%)

Query: 11  GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           GKVI CKAA+   P  PLVI+EI V+PP+  E+R+KIL +S+CH+D+  W  + +  +  
Sbjct: 6   GKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAER-A 64

Query: 71  LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYR 129
            P I GHEAVG+VESVGE V++VKE D V+P F+ +CGEC+ CK  +SN C ++     +
Sbjct: 65  FPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMK 124

Query: 130 PNMPRDGTSRFREL--------KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181
             M  DG +RF           +   I+HFLN S+FTEY+V+D   VVKI P+ PL    
Sbjct: 125 RVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMS 184

Query: 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
           LLSCGVSTGVGAAW +A V+ G + A+FGLG+VGLAVAEGAR   AS+IIGVD N  KFE
Sbjct: 185 LLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFE 244

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKT 301
            GK  G+TDFINP     K V Q+I+E+T GG DY FEC G   V+ +AF S+  GWG T
Sbjct: 245 KGKLMGVTDFINPKDL-TKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGST 303

Query: 302 VILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKV 351
           V++G+      + L+ +E+  GR + G+ FGG KP+S +   AQ+ +  V
Sbjct: 304 VLVGIYPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGV 353

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1

 Score =  328 bits (840), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 178/367 (48%), Positives = 231/367 (62%), Gaps = 16/367 (4%)

Query: 6   ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
           AS   G+VI CKAA+     +P+ IE+++V PP+A E+R+KIL T+LCH+D   W  S  
Sbjct: 2   ASSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTW--SGK 59

Query: 66  LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF- 124
            P+   P I GHEA G+VESVGE V EV+  D V+P +  +C EC+ CKS K+N C K  
Sbjct: 60  DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR 119

Query: 125 ---GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181
              G G    M  D  SRF  + G  I+HF+  S+F++Y+VV    V KI P  PL   C
Sbjct: 120 AATGVGV---MMNDRKSRF-SINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVC 175

Query: 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
           LL CGVSTG+GA W  A VE GS VAIFGLG VGLAVAEGA+   AS+IIG+DI+ +KF+
Sbjct: 176 LLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFD 235

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKT 301
           + K FG+T+F+NP    DK + QVI ++TDGG DY FECIG  SVM  A     +GWG +
Sbjct: 236 VAKNFGVTEFVNPKD-HDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTS 294

Query: 302 VILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK-----VHLRSS 356
           VI+GV   G  IS    +++ GR   GT FGG K RS +  L +KYL+K      ++  S
Sbjct: 295 VIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHS 354

Query: 357 FHLCDPN 363
            +L D N
Sbjct: 355 MNLTDIN 361

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
359492460	408	PREDICTED: alcohol dehydrogenase-like 1	0.935	0.855	0.731	1e-147
302141994	387	unnamed protein product [Vitis vinifera]	0.935	0.901	0.731	1e-147
357465103	391	Alcohol dehydrogenase-like protein [Medi	0.911	0.869	0.712	1e-134
115451243	381	Os03g0189400 [Oryza sativa Japonica Grou	0.898	0.879	0.667	1e-126
297845266	388	hypothetical protein ARALYDRAFT_472484 [	0.935	0.899	0.635	1e-126
15219884	386	alcohol dehydrogenase-like 2 [Arabidopsi	0.922	0.891	0.650	1e-126
212720660	382	putative alcohol dehydrogenase superfami	0.919	0.897	0.638	1e-124
297845264	388	hypothetical protein ARALYDRAFT_472482 [	0.954	0.917	0.622	1e-124
195626420	382	alcohol dehydrogenase 1 [Zea mays]	0.919	0.897	0.635	1e-124
15219882	388	alcohol dehydrogenase-like 1 [Arabidopsi	0.954	0.917	0.617	1e-123

>gi|359492460|ref|XP_002285748.2| PREDICTED: alcohol dehydrogenase-like 1 [Vitis vinifera]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/350 (73%), Positives = 294/350 (84%), Gaps = 1/350 (0%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M  K++S  AGK I CKAAIC+ PG+ LVIEEIEV PP+AWEIRIKILCTSLCH+DVTFW
Sbjct: 22  MEKKNSSETAGKAITCKAAICKEPGEALVIEEIEVAPPEAWEIRIKILCTSLCHTDVTFW 81

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           K + D P+   P I GHEAVGVVESVGE+VEEVKE DLV+P+F   C ECRDC S+KSN 
Sbjct: 82  KMN-DGPERSFPKILGHEAVGVVESVGEHVEEVKEGDLVVPVFLPSCKECRDCTSTKSNL 140

Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
           C+KFG  +   MPRDG+SRFR +KG+V+HHFL +SSF EY+VVDI HVV++   IP   A
Sbjct: 141 CTKFGSKFYQGMPRDGSSRFRNMKGEVVHHFLFVSSFVEYTVVDIAHVVRLNHEIPADKA 200

Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
           CLLSCGVSTG+GAAWKVA VE GSTVAIFGLGAVGLAVAEGARL  ASKIIGVD+NPEKF
Sbjct: 201 CLLSCGVSTGIGAAWKVAEVEEGSTVAIFGLGAVGLAVAEGARLRGASKIIGVDLNPEKF 260

Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
           EIGKKFG+T FINP  CG+K VSQV+KEMTDGGADYCFECIGL S+M DAF+ SREGWGK
Sbjct: 261 EIGKKFGVTHFINPTACGEKAVSQVVKEMTDGGADYCFECIGLASLMKDAFDCSREGWGK 320

Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           TVILGVEMHGS +++NS +IL+GRSV G+ FGGLKP+SDI  LA+KY+DK
Sbjct: 321 TVILGVEMHGSDLNVNSSQILRGRSVMGSLFGGLKPKSDIPILAKKYIDK 370

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141994|emb|CBI19197.3| unnamed protein product [Vitis vinifera]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/350 (73%), Positives = 294/350 (84%), Gaps = 1/350 (0%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M  K++S  AGK I CKAAIC+ PG+ LVIEEIEV PP+AWEIRIKILCTSLCH+DVTFW
Sbjct: 1   MEKKNSSETAGKAITCKAAICKEPGEALVIEEIEVAPPEAWEIRIKILCTSLCHTDVTFW 60

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           K + D P+   P I GHEAVGVVESVGE+VEEVKE DLV+P+F   C ECRDC S+KSN 
Sbjct: 61  KMN-DGPERSFPKILGHEAVGVVESVGEHVEEVKEGDLVVPVFLPSCKECRDCTSTKSNL 119

Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
           C+KFG  +   MPRDG+SRFR +KG+V+HHFL +SSF EY+VVDI HVV++   IP   A
Sbjct: 120 CTKFGSKFYQGMPRDGSSRFRNMKGEVVHHFLFVSSFVEYTVVDIAHVVRLNHEIPADKA 179

Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
           CLLSCGVSTG+GAAWKVA VE GSTVAIFGLGAVGLAVAEGARL  ASKIIGVD+NPEKF
Sbjct: 180 CLLSCGVSTGIGAAWKVAEVEEGSTVAIFGLGAVGLAVAEGARLRGASKIIGVDLNPEKF 239

Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
           EIGKKFG+T FINP  CG+K VSQV+KEMTDGGADYCFECIGL S+M DAF+ SREGWGK
Sbjct: 240 EIGKKFGVTHFINPTACGEKAVSQVVKEMTDGGADYCFECIGLASLMKDAFDCSREGWGK 299

Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           TVILGVEMHGS +++NS +IL+GRSV G+ FGGLKP+SDI  LA+KY+DK
Sbjct: 300 TVILGVEMHGSDLNVNSSQILRGRSVMGSLFGGLKPKSDIPILAKKYIDK 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465103|ref|XP_003602833.1| Alcohol dehydrogenase-like protein [Medicago truncatula] gi|355491881|gb|AES73084.1| Alcohol dehydrogenase-like protein [Medicago truncatula]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/341 (71%), Positives = 292/341 (85%), Gaps = 1/341 (0%)

Query: 11  GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           GK IRCKAAIC+  G+PLVIEE+E++PPK+WE+RIKILCTSLCHSDVTFWK ++  P   
Sbjct: 13  GKPIRCKAAICKKSGEPLVIEEVELDPPKSWEVRIKILCTSLCHSDVTFWKMNSSAPTAR 72

Query: 71  LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
            P I GHEAVG+VESVGE VEEVKE DLV+P+F  +CGEC DC S+KSN C+KFG     
Sbjct: 73  FPRILGHEAVGLVESVGENVEEVKEGDLVVPVFLPNCGECIDCGSTKSNNCTKFGNKPIR 132

Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
           +MPRDGTSRFR++KG+V+HH L +SSF+EY+VVD+THVVKIT  IPL  ACLLSCGVSTG
Sbjct: 133 DMPRDGTSRFRDMKGEVVHHLLGVSSFSEYTVVDVTHVVKITHDIPLDKACLLSCGVSTG 192

Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
           +GAAWKVA VE G+TVAIFGLGAVGLAVA  A+   ASKIIGVD+N +KFEIGK+FGITD
Sbjct: 193 IGAAWKVADVEKGTTVAIFGLGAVGLAVAVAAKQRGASKIIGVDLNHDKFEIGKQFGITD 252

Query: 251 FINP-ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           F+NP +T  +K+VS+VIK+MT+GGADYCFECIGL S+M +AFNSSREGWGKTVI+GVEMH
Sbjct: 253 FVNPSSTSNEKSVSEVIKDMTNGGADYCFECIGLASLMTEAFNSSREGWGKTVIIGVEMH 312

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           GSP++LN  +ILKG+++ G+ FGGLKP+SD+  LAQKYLDK
Sbjct: 313 GSPLTLNPYDILKGKTITGSLFGGLKPKSDLPLLAQKYLDK 353

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115451243|ref|NP_001049222.1| Os03g0189400 [Oryza sativa Japonica Group] gi|108706592|gb|ABF94387.1| oxidoreductase, zinc-binding dehydrogenase family protein, expressed [Oryza sativa Japonica Group] gi|113547693|dbj|BAF11136.1| Os03g0189400 [Oryza sativa Japonica Group] gi|215695369|dbj|BAG90560.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/337 (66%), Positives = 263/337 (78%), Gaps = 2/337 (0%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           IRCKAA+CR  G+PL +EEI V+PPKA E+RIKI+CTSLCHSDVTFW+   D P +  P 
Sbjct: 9   IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQ-DFPGV-FPR 66

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           IFGHEA GVVESVGE+VE     D V+P F   C EC DC S +SN CS +    RP MP
Sbjct: 67  IFGHEAFGVVESVGEHVEGFAAGDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMP 126

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
           RDGT+RFR+  G  IHHFL +SSF+EY+VVD   VV++ P +P   A LLSCG +TGVGA
Sbjct: 127 RDGTARFRDRHGAPIHHFLGVSSFSEYTVVDANQVVRVDPAVPPATASLLSCGATTGVGA 186

Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
           AWK+A VE GS+VAIFGLGAVGLAVAEGAR+  AS IIGVD+NPEK E+GKKFG+T FIN
Sbjct: 187 AWKLAKVEPGSSVAIFGLGAVGLAVAEGARICGASTIIGVDLNPEKHELGKKFGVTHFIN 246

Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
           P   GDK VSQ I EMTDGGADYCFECIGL SVM+DAF SSREGWGKT+ILGVEMHG+P+
Sbjct: 247 PQELGDKPVSQAIIEMTDGGADYCFECIGLASVMSDAFRSSREGWGKTIILGVEMHGAPL 306

Query: 314 SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           S+ S+EIL G+ V G+ FGG+KP+ DI  LA KYL+K
Sbjct: 307 SIPSLEILNGKCVMGSLFGGVKPKQDIPILADKYLNK 343

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845266|ref|XP_002890514.1| hypothetical protein ARALYDRAFT_472484 [Arabidopsis lyrata subsp. lyrata] gi|297336356|gb|EFH66773.1| hypothetical protein ARALYDRAFT_472484 [Arabidopsis lyrata subsp. lyrata]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 223/351 (63%), Positives = 277/351 (78%), Gaps = 2/351 (0%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M+  S S   GK IRCKAAI R  G+ LVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFW
Sbjct: 1   MDKASLSSTEGKPIRCKAAILRKAGEALVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFW 60

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           K  +  P    P I GHEAVGVVES+G  V+  K+ D+VLP+F   C EC++CKS KSN 
Sbjct: 61  KLESG-PLARFPRILGHEAVGVVESIGANVDGFKQGDVVLPVFQPQCEECKECKSPKSNW 119

Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
           C+++   +  N  R G TSRF++  G+VIHHF+ +SSFTEY+VVDI H+VKI+P IP+ I
Sbjct: 120 CTRYTNDFLSNTRRYGMTSRFKDSFGEVIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDI 179

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
           A LLSCGV+TG+GAAWKVA VE GSTVAIFGLGAVGLAVAEG RL  A+KIIGVD+NP K
Sbjct: 180 AALLSCGVATGIGAAWKVADVEEGSTVAIFGLGAVGLAVAEGVRLRGATKIIGVDLNPAK 239

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
           FEIGK++G+TDF+NPA CG+KT+S+VI+EMT+ GADY FECIGL S+M +AFNS+R G G
Sbjct: 240 FEIGKRYGMTDFVNPALCGEKTISEVIREMTEVGADYSFECIGLASLMEEAFNSTRPGSG 299

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           KTVILG+E    P+SL S ++L+GR++CGT FGGLKP+ DI  L  +YL K
Sbjct: 300 KTVILGMEQKALPVSLGSYDLLRGRTICGTLFGGLKPKLDIPILVDRYLKK 350

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219884|ref|NP_173660.1| alcohol dehydrogenase-like 2 [Arabidopsis thaliana] gi|75337342|sp|Q9SK87.1|ADHL2_ARATH RecName: Full=Alcohol dehydrogenase-like 2 gi|6587844|gb|AAF18533.1|AC006551_19 Very similar to alcohol dehydrogenase [Arabidopsis thaliana] gi|50253432|gb|AAT71918.1| At1g22440 [Arabidopsis thaliana] gi|51972064|gb|AAU15136.1| At1g22440 [Arabidopsis thaliana] gi|332192121|gb|AEE30242.1| alcohol dehydrogenase-like 2 [Arabidopsis thaliana]

 Score =  456 bits (1174), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/346 (65%), Positives = 274/346 (79%), Gaps = 2/346 (0%)

Query: 6   ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
           AS   GK IRCKAAI R  G+PLVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFWK  + 
Sbjct: 4   ASITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG 63

Query: 66  LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
            P    P I GHEAVGVVES+GE V+  K+ D+VLP+FH  C EC++C S KSN C+K+ 
Sbjct: 64  -PLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYT 122

Query: 126 RGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
             Y  N  R G TSRF++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLS
Sbjct: 123 NDYLSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLS 182

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
           C V+TG+GAAWKVA VE GSTV IFGLGAVGLAVAEG RL  A+KIIGVD+NP KFEIGK
Sbjct: 183 CSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGK 242

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
           +FGITDF+NPA CG+KT+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++L
Sbjct: 243 RFGITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVL 302

Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           G+E    PISL S ++L+GR+VCGT FGGLKP+ DI  L  +YL K
Sbjct: 303 GMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKK 348

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212720660|ref|NP_001132441.1| putative alcohol dehydrogenase superfamily protein [Zea mays] gi|194694392|gb|ACF81280.1| unknown [Zea mays] gi|414865247|tpg|DAA43804.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays]

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/351 (63%), Positives = 269/351 (76%), Gaps = 8/351 (2%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M N+   P     IRCKAA+CR  G+PL IEE+ V+ PKA E+RI+I+CTSLCHSDVTFW
Sbjct: 1   MENQGPKP-----IRCKAAVCRAAGEPLAIEEVVVDTPKAHEVRIRIICTSLCHSDVTFW 55

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           +   DLP   +P IFGHEA GVVESVGE V+E    D V+P F   C EC DC+S++SN 
Sbjct: 56  RMK-DLPD-NIPRIFGHEAFGVVESVGEQVDEFAAGDAVVPTFLGQCSECVDCRSARSNM 113

Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
           CSK+    RP MPRDGT+RF + +G  +HHF  +SSF EY+VVD+  VVK+ P +P  +A
Sbjct: 114 CSKYRFAVRPGMPRDGTTRFTDGQGRPLHHFFGVSSFAEYTVVDVNQVVKLNPAVPPALA 173

Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
           CLLSCG STGVGAAWK A VE GS+VAIFGLGAVGLAVAEGAR+  ASKIIGVDINPEK 
Sbjct: 174 CLLSCGASTGVGAAWKQAKVEPGSSVAIFGLGAVGLAVAEGARICGASKIIGVDINPEKC 233

Query: 241 EIGKKFGITDFINPATCG-DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
           E+GKKFG+T FINP   G +K V Q I EMTDGGADYCFECIGL ++MNDAF SSR+GWG
Sbjct: 234 ELGKKFGVTHFINPKELGEEKPVHQAIAEMTDGGADYCFECIGLAALMNDAFRSSRDGWG 293

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           KT+ILGVEMHG+P+ ++  EIL G+SV G+ FGG+KP+ DI  LA KY++K
Sbjct: 294 KTIILGVEMHGAPLCISPHEILHGKSVIGSMFGGVKPKQDIPILADKYMNK 344

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845264|ref|XP_002890513.1| hypothetical protein ARALYDRAFT_472482 [Arabidopsis lyrata subsp. lyrata] gi|297336355|gb|EFH66772.1| hypothetical protein ARALYDRAFT_472482 [Arabidopsis lyrata subsp. lyrata]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/358 (62%), Positives = 274/358 (76%), Gaps = 2/358 (0%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M+N S S   GK IRCKAAICR  G+ LVIE+I V+PP+ +E+RIKILCTSLCH+D+TFW
Sbjct: 1   MDNTSFSSNEGKPIRCKAAICRKAGEALVIEDIHVDPPQPYEVRIKILCTSLCHTDLTFW 60

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           K     P    P I GHEAVGVVES+GE V   K+ D+VLP+FH  C EC+DCKSSK+N 
Sbjct: 61  KLDFG-PISRFPRILGHEAVGVVESIGENVVGFKQGDVVLPVFHPYCEECKDCKSSKTNW 119

Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
           C ++   +  N  R G  SRF++  G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+  
Sbjct: 120 CERYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
           A LLSCGVSTG+GAAWKVA VE GSTVA+FGLGAVGLAVAEGARL  A+KIIG+D NP+K
Sbjct: 180 AALLSCGVSTGIGAAWKVANVEEGSTVAVFGLGAVGLAVAEGARLRGAAKIIGIDTNPDK 239

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
           FE+GKKFG TDFINP  CG+K VS+V+KEMT GG DY FEC+GL S++N+AF S+R G G
Sbjct: 240 FELGKKFGFTDFINPTLCGEKKVSEVVKEMTKGGVDYSFECVGLASLLNEAFISTRTGTG 299

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSF 357
           KTV+LG+E H +PISL S ++L+GR++CG+ FGGLK + DI  L   YL K     SF
Sbjct: 300 KTVMLGMEKHAAPISLGSFDLLRGRNICGSLFGGLKSKLDIPILVDHYLKKELNLDSF 357

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195626420|gb|ACG35040.1| alcohol dehydrogenase 1 [Zea mays]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/351 (63%), Positives = 269/351 (76%), Gaps = 8/351 (2%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M N+   P     IRCKAA+CR  G+PL IEE+ V+ PKA E+RI+I+CTSLCHSDVTFW
Sbjct: 1   MENQGPKP-----IRCKAAVCRAAGEPLAIEEVVVDTPKAHEVRIRIICTSLCHSDVTFW 55

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           +   DLP   +P IFGHEA GVVESVGE V+E    D V+P F   C EC DC+S++SN 
Sbjct: 56  RMK-DLPD-NIPRIFGHEAFGVVESVGEQVDEFAAGDAVVPTFLGQCSECVDCRSARSNM 113

Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
           CSK+    RP MPRDGT+RF + +G  +HHF  +SSF EY+VVD+  VVK+ P +P  +A
Sbjct: 114 CSKYRFAVRPGMPRDGTTRFTDGQGRPLHHFFGVSSFAEYTVVDVNQVVKLNPAVPPALA 173

Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
           CLLSCG STGVGAAWK A VE GS+VAIFGLGAVGLAVAEGAR+  ASKIIGVDINP+K 
Sbjct: 174 CLLSCGASTGVGAAWKQAKVEPGSSVAIFGLGAVGLAVAEGARICGASKIIGVDINPDKC 233

Query: 241 EIGKKFGITDFINPATCG-DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
           E+GKKFG+T FINP   G +K V Q I EMTDGGADYCFECIGL ++MNDAF SSR+GWG
Sbjct: 234 ELGKKFGVTHFINPKELGEEKPVHQAIAEMTDGGADYCFECIGLAALMNDAFRSSRDGWG 293

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           KT+ILGVEMHG+P+ ++  EIL G+SV G+ FGG+KP+ DI  LA KY++K
Sbjct: 294 KTIILGVEMHGAPLCISPHEILHGKSVIGSMFGGVKPKQDIPILADKYMNK 344

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219882|ref|NP_173659.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana] gi|79318344|ref|NP_001031079.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana] gi|75337341|sp|Q9SK86.1|ADHL1_ARATH RecName: Full=Alcohol dehydrogenase-like 1 gi|6587845|gb|AAF18534.1|AC006551_20 Very similar to alcohol dehydrogenase [Arabidopsis thaliana] gi|20260430|gb|AAM13113.1| putative alcohol dehydrogenase [Arabidopsis thaliana] gi|22136286|gb|AAM91221.1| putative alcohol dehydrogenase [Arabidopsis thaliana] gi|332192119|gb|AEE30240.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana] gi|332192120|gb|AEE30241.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/358 (61%), Positives = 273/358 (76%), Gaps = 2/358 (0%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           M+    S   GK I CKAAICR  G+ LVIE+I V+PP+A+E+RIKILCTSLCH+D+TFW
Sbjct: 1   MDKTFFSSNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFW 60

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
           K S   P    P I GHEAVGVVES+GE V+  K+ D+VLP+FH  C EC+DCKSSK+N 
Sbjct: 61  KLSFG-PISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNW 119

Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
           C ++   +  N  R G  SRF++  G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+  
Sbjct: 120 CDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
           A LLSCGVSTG+GAAWKVA VE GST+AIFGLGAVGLAVAEGARL  A+KIIG+D N +K
Sbjct: 180 AALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDK 239

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
           FE+GKKFG TDFINP  CG+K +S+VIKEMT+GG DY FEC+GL S++N+AF S+R G G
Sbjct: 240 FELGKKFGFTDFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTG 299

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLRSSF 357
           KTV+LG+E H +PISL S ++L+GR +CG+ FGGLK + DI  L   YL K     SF
Sbjct: 300 KTVMLGMEKHAAPISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSF 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	373
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.922	0.891	0.552	2.5e-97
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.935	0.899	0.527	5.3e-95
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.908	0.871	0.533	4.3e-93
TAIR|locus:2157627	390	AT5G42250 [Arabidopsis thalian	0.924	0.884	0.495	9.9e-87
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.919	0.900	0.411	1.4e-64
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.900	0.886	0.407	3.3e-63
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.890	0.882	0.401	8.8e-63
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.908	0.860	0.394	6.2e-62
MGI|MGI:87929	374	Adh5 "alcohol dehydrogenase 5	0.892	0.890	0.402	4.3e-61
RGD|2292706	374	Adh5 "alcohol dehydrogenase 5	0.892	0.890	0.402	9e-61

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
 Identities = 191/346 (55%), Positives = 235/346 (67%)

Query:     6 ASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTD 65
             AS   GK IRCKAAI R  G+PL          +A+E+RIKILCTSLCH+DVTFWK  + 
Sbjct:     4 ASITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG 63

Query:    66 LPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
              P    P I                      D+VLP+FH  C EC++C S KSN C+K+ 
Sbjct:    64 -PLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYT 122

Query:   126 RGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
               Y  N  R G TSRF++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLS
Sbjct:   123 NDYLSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLS 182

Query:   185 CGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGK 244
             C V+TG+GAAWKVA VE GSTV IF             RL  A+KIIGVD+NP KFEIGK
Sbjct:   183 CSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGK 242

Query:   245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
             +FGITDF+NPA CG+KT+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++L
Sbjct:   243 RFGITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVL 302

Query:   305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
             G+E    PISL S ++L+GR+VCGT FGGLKP+ DI  L  +YL K
Sbjct:   303 GMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKK 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
 Identities = 185/351 (52%), Positives = 232/351 (66%)

Query:     1 MNNKSASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFW 60
             M+    S   GK I CKAAICR  G+ L          +A+E+RIKILCTSLCH+D+TFW
Sbjct:     1 MDKTFFSSNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFW 60

Query:    61 KSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNT 120
             K S   P    P I                      D+VLP+FH  C EC+DCKSSK+N 
Sbjct:    61 KLSFG-PISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNW 119

Query:   121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
             C ++   +  N  R G  SRF++  G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+  
Sbjct:   120 CDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179

Query:   180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEK 239
             A LLSCGVSTG+GAAWKVA VE GST+AIF             RL  A+KIIG+D N +K
Sbjct:   180 AALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDK 239

Query:   240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
             FE+GKKFG TDFINP  CG+K +S+VIKEMT+GG DY FEC+GL S++N+AF S+R G G
Sbjct:   240 FELGKKFGFTDFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTG 299

Query:   300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
             KTV+LG+E H +PISL S ++L+GR +CG+ FGGLK + DI  L   YL K
Sbjct:   300 KTVMLGMEKHAAPISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKK 350

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
 Identities = 182/341 (53%), Positives = 229/341 (67%)

Query:    11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
             GK IRCKAA+ R PG+ L          +A+E+RIKI+CTSLCH+DV+F K  +  P   
Sbjct:    12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSG-PLAR 70

Query:    71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
              P I                      D+VLP+FH  C ECRDCKSSKSN C++F   +  
Sbjct:    71 FPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLS 130

Query:   131 NMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             N  R G TSRF++  G+ I+HFL +SSF+EY+VVDI H+VKI+P IP+  A LLSCGVST
Sbjct:   131 NTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVST 190

Query:   190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
             G+GAAWKVA VE GSTVA+F             RL  A KIIGVD+NPEKFE+GKKFG T
Sbjct:   191 GIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFT 250

Query:   250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
             DFIN   CG+  +S+VIKEMT GG DY FEC+GL S++ +AF+S+R G GKTV+LG++ H
Sbjct:   251 DFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKH 310

Query:   310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +P+SL S ++L+GR VCG+ FGGLKP+ DI  L   YL K
Sbjct:   311 LTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKK 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)]

 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 173/349 (49%), Positives = 224/349 (64%)

Query:     2 NNKSASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWK 61
             N+ S +  + K IRCKAA+ R  G+PL          + +E+RI+I+CT+LCHSDVTFWK
Sbjct:     5 NSSSDNKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWK 64

Query:    62 SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTC 121
                 +P    P I                      D VLP F  DCG+C DCKS KSN C
Sbjct:    65 --LQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLC 122

Query:   122 SKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
             SKF     P MPR D +SRF +L G+ + HFLN+SSF+EY+V+D+ +VVKI   IP   A
Sbjct:   123 SKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRA 182

Query:   181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKF 240
             CLLSCGVSTGVGAAW+ A VE GSTV IF             RL  AS+IIGVDINP KF
Sbjct:   183 CLLSCGVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKF 242

Query:   241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
             ++G+KFG+T+F+N  TC    VS+VI EMTDGGADYCFEC+G +S++ +A+   R+GWGK
Sbjct:   243 QVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGK 302

Query:   301 TVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYL 348
             T+ LGV+  GS I L+S ++L  G+ + G+ FGGLK ++ I  L ++YL
Sbjct:   303 TITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYL 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 144/350 (41%), Positives = 194/350 (55%)

Query:     1 MNNKSASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFW 60
             M+  S+S +  +VI C AA+    G+PL          +  EIRIK++CTSLC SD++ W
Sbjct:     1 MSASSSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAW 60

Query:    61 KSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNT 120
             +S + LP+     IF                     D VL +F  +CG CR C S KSN 
Sbjct:    61 ESQSLLPR-----IFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNM 115

Query:   121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
             C   G   +  M  D  +RF  +KG  ++H+  +SSF+EY+VV     VK+ P  PL   
Sbjct:   116 CQVLGMERKGLMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKI 174

Query:   181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKF 240
             CLLSCGV+ G+GAAW VA V+ GS+V IF             +L  A++I+GVDINP K 
Sbjct:   175 CLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKA 234

Query:   241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
             E  K FG+TDFIN     +  + QVIK MT GGAD+ FEC+G T +   A  S  +GWG 
Sbjct:   235 EQAKTFGVTDFINSNDLSEP-IPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGM 293

Query:   301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
             TV LGV      +S +    L G+S+ GT FGG KP+SD+ +L  KY++K
Sbjct:   294 TVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNK 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 139/341 (40%), Positives = 184/341 (53%)

Query:    11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
             G++IRCKAA+    GKPL          +  E+RIKIL TSLCH+DV FW++    P  P
Sbjct:     5 GQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFP 64

Query:    71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYR 129
                IF                     D VLPIF  +CGECR C S +SN C        R
Sbjct:    65 R--IFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTER 122

Query:   130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               M  DG SRF  + G  I+HFL  S+F+EY+VV    V KI P  PL   C++SCG+ST
Sbjct:   123 GGMIHDGESRF-SINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181

Query:   190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
             G+GA   VA  + G +VAIF             R+  AS+IIGVD N ++F+  K+FG+T
Sbjct:   182 GLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVT 241

Query:   250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
             + +NP    DK + QVI EMTDGG D   EC G    M  AF    +GWG  V++GV   
Sbjct:   242 ECVNPKD-HDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSK 300

Query:   310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
                   + +  L  R++ GT+FG  KP++DI  + +KY++K
Sbjct:   301 DDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 138/344 (40%), Positives = 187/344 (54%)

Query:    11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
             GKVI+CKAA+    GKPL          KA E+R+KI  T +CH+D  +  S +D P+  
Sbjct:     5 GKVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDA-YTLSGSD-PEGL 62

Query:    71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GR 126
              PVI                      D V+P++   CGEC+ CK+ K+N C K     G+
Sbjct:    63 FPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQ 122

Query:   127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
             G  P    D TSRF   KG  + HF+  S+F+EY+VV    + K+  H PL   CLL CG
Sbjct:   123 GLMP----DNTSRFT-CKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCG 177

Query:   187 VSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKF 246
             +STG GAA   A VE GST A+F             +   A++IIG+D+NP+KFEI KKF
Sbjct:   178 ISTGYGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKF 237

Query:   247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
             G T+F+NP     K + +V+ E+TDGG DY FECIG   +M  A  +  +GWG +VI+GV
Sbjct:   238 GATEFVNPKD-HSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGV 296

Query:   307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
                G  IS    +++ GR+  GT FGG K    +  L   Y++K
Sbjct:   297 AGAGQEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNK 340

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 138/350 (39%), Positives = 189/350 (54%)

Query:    11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
             GKVI CKAA+   P  PL          +  E+R+KIL +S+CH+D+  W  + +  +  
Sbjct:     6 GKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERA- 64

Query:    71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG-YR 129
              P I                      D V+P F+ +CGEC+ CK  +SN C ++     +
Sbjct:    65 FPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMK 124

Query:   130 PNMPRDGTSRFREL--------KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181
               M  DG +RF           +   I+HFLN S+FTEY+V+D   VVKI P+ PL    
Sbjct:   125 RVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMS 184

Query:   182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFE 241
             LLSCGVSTGVGAAW +A V+ G + A+F             R   AS+IIGVD N  KFE
Sbjct:   185 LLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFE 244

Query:   242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKT 301
              GK  G+TDFINP     K V Q+I+E+T GG DY FEC G   V+ +AF S+  GWG T
Sbjct:   245 KGKLMGVTDFINPKDL-TKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGST 303

Query:   302 VILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKV 351
             V++G+      + L+ +E+  GR + G+ FGG KP+S +   AQ+ +  V
Sbjct:   304 VLVGIYPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGV 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

MGI|MGI:87929 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Mus musculus (taxid:10090)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 139/345 (40%), Positives = 187/345 (54%)

Query:    10 AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
             A +VIRCKAA+    GKPL          KA E+RIKIL T++CH+D  +  S  D P+ 
Sbjct:     2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDA-YTLSGAD-PEG 59

Query:    70 PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
               PVI                      D V+P++   CGEC+ C + K+N C K     G
Sbjct:    60 CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119

Query:   126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
             +G  P    DGTSRF   KG  + HF+  S+F+EY+VV    V KI P  PL   CLL C
Sbjct:   120 KGLMP----DGTSRFT-CKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGC 174

Query:   186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
             G+STG GAA   A VE GST A+F             ++  AS+IIG+DIN +KF   K+
Sbjct:   175 GISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKE 234

Query:   246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
             FG ++ I+P     K++ +V+ EMTDGG DY FECIG   VM  A  ++ +GWG +V++G
Sbjct:   235 FGASECISPQDFS-KSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVG 293

Query:   306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
             V   G  IS    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct:   294 VAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IMP

GO:0003016 "respiratory system process" evidence=IMP

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISO;IDA

GO:0005504 "fatty acid binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0006068 "ethanol catabolic process" evidence=ISO

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IMP

GO:0018467 "formaldehyde dehydrogenase activity" evidence=ISO

GO:0032496 "response to lipopolysaccharide" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0045777 "positive regulation of blood pressure" evidence=IMP

GO:0046294 "formaldehyde catabolic process" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IMP

GO:0051775 "response to redox state" evidence=ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IMP

GO:0055114 "oxidation-reduction process" evidence=ISO;IMP;IDA

RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 139/345 (40%), Positives = 187/345 (54%)

Query:    10 AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
             A +VIRCKAA+    GKPL          +A E+RIKI+ T++CH+D  +  S  D P+ 
Sbjct:     2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDA-YTLSGAD-PEG 59

Query:    70 PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
               PVI                      D V+P++   CGEC+ C + K+N C K     G
Sbjct:    60 CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119

Query:   126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
             +G  P    DGTSRF   KG  I HF+  S+F+EY+VV    V KI P  PL   CLL C
Sbjct:   120 KGLMP----DGTSRFT-CKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGC 174

Query:   186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
             G+STG GAA   A VE GST A+F             ++  AS+IIG+DIN +KF   K+
Sbjct:   175 GISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKE 234

Query:   246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
             FG T+ INP     K++ +V+ EMTDGG D+ FECIG   VM  A  ++ +GWG +V++G
Sbjct:   235 FGATECINPQDFS-KSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVG 293

Query:   306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
             V   G  IS    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct:   294 VAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;ISO;IDA

GO:0005504 "fatty acid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA;ISO

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0032496 "response to lipopolysaccharide" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0045777 "positive regulation of blood pressure" evidence=IEA;ISO

GO:0046294 "formaldehyde catabolic process" evidence=IEA;ISO

GO:0051409 "response to nitrosative stress" evidence=IEA;ISO

GO:0051775 "response to redox state" evidence=IEA;ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.5014	0.9115	0.8947	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.5014	0.9115	0.8947	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.5014	0.9115	0.8947	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.4869	0.8927	0.8903	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.4811	0.8927	0.8903	yes	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5029	0.8927	0.8809	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.5014	0.9115	0.8947	N/A	no
Q9SK87	ADHL2_ARATH	1, ., 1, ., 1, ., 1	0.6502	0.9222	0.8911	yes	no
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.4811	0.8927	0.8903	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4687	0.9329	0.9182	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4782	0.8927	0.8903	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.5144	0.9168	0.8952	N/A	no
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.4511	0.9008	0.8704	yes	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.4869	0.8927	0.8903	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4768	0.8927	0.8786	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
4th Layer	1.1.1.1	0.946

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	373
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-145
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-144
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-138
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-128
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-127
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-116
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-114
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-107
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-104
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	8e-81
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	7e-76
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-68
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-57
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-50
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	4e-49
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	6e-48
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-43
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	2e-42
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-41
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	5e-41
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-40
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-40
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-39
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-39
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	3e-39
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-39
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	4e-39
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-38
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	5e-36
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-35
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-34
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-33
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-31
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-31
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-29
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	5e-29
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	9e-29
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-27
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	5e-26
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	9e-26
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-25
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-24
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	2e-24
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-23
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-22
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-22
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	3e-22
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	5e-22
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-21
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	8e-21
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-20
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-19
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-19
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-19
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-18
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	8e-18
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	7e-17
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	6e-16
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	5e-14
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	8e-14
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	9e-14
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	1e-13
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	1e-13
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	2e-13
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	6e-13
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-12
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-11
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-11
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	6e-11
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-10
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	3e-10
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	3e-10
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-09
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	4e-09
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-08
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	6e-08
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	7e-08
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	9e-08
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-07
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-07
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	8e-07
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	2e-06
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-06
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	7e-06
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-05
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	3e-05
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	8e-05
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	9e-05
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-04
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-04
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	6e-04
cd01075	200	cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d	6e-04
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	8e-04
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	0.003

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  516 bits (1330), Expect = 0.0
 Identities = 188/338 (55%), Positives = 229/338 (67%), Gaps = 5/338 (1%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           I CKAA+    GKPLVIEE+EV PP+A E+RIKIL TSLCH+DV FW++    P  P   
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPR-- 58

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-M 132
           I GHEA G+VESVGE V ++K  D VLP+F  +C ECR CKS KSN C           M
Sbjct: 59  ILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVM 118

Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVG 192
             DG SRF  + G  I+HF+  S+F+EY+VV +  V KI P  PL   CLLSCGVSTG+G
Sbjct: 119 INDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLG 177

Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
           AAW VA V+ GSTVAIFGLGAVGLAVAEGAR+  AS+IIGVD+NP KFE  KKFG+T+F+
Sbjct: 178 AAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV 237

Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
           NP    DK V +VI EMT GG DY FEC G    M  AF    +GWG TV+LGV    + 
Sbjct: 238 NPKDH-DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAV 296

Query: 313 ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
            S + + +L GR++ GT FGG KP++D+  L +KY+ K
Sbjct: 297 FSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKK 334

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  416 bits (1071), Expect = e-145
 Identities = 191/350 (54%), Positives = 243/350 (69%), Gaps = 8/350 (2%)

Query: 6   ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
           AS   GKVI CKAA+   PG+PLV+EEI V+PP+  E+RIKIL TS+CH+D++ WK   +
Sbjct: 1   ASETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE 60

Query: 66  LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
             +   P I GHEA G+VESVGE VE++K  D V+PIF+ +CG+CR CK  K+N C  + 
Sbjct: 61  AQR-AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYR 119

Query: 126 -RGYRPNMPRDGTSRFRELK-GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 183
              ++  M  DG +RF     G  I+HFLN S+FTEY+V+D   VVKI P+ PL    LL
Sbjct: 120 VDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLL 179

Query: 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243
           SCGVSTGVGAAW  A V+ GS+VAIFGLGAVGLAVAEGAR   ASKIIGVDINPEKFE G
Sbjct: 180 SCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG 239

Query: 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
           K+ GITDFINP    DK V + I+EMT GG DY FEC G   V+ +AF S+ +GWG TV+
Sbjct: 240 KEMGITDFINPKDS-DKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL 298

Query: 304 LGVEMHGSP--ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKV 351
           LG+  H +P  + L+ +E+  GRS+ G+ FG  K +S +  LA++ +  V
Sbjct: 299 LGI--HPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGV 346

Length = 381

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  413 bits (1064), Expect = e-144
 Identities = 179/337 (53%), Positives = 229/337 (67%), Gaps = 7/337 (2%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           I+CKAA+    GKPLVIEEIEV PPKA E+RIK+L TS+CH+D+   +          PV
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF---KATLFPV 57

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           I GHE  G+VESVGE V  +K  D V+P+F   CGEC +C+S K+N C K+       MP
Sbjct: 58  ILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMP 117

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
            DGTSRF   KG  I+HFL  S+F++Y+VVD  +V KI P  PL   CLL CG STG GA
Sbjct: 118 -DGTSRF-TCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGA 175

Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
           AW  A VE GSTVA+FGLGAVGL+   GA++  AS+IIGVDIN +KFE  K+FG TDFIN
Sbjct: 176 AWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFIN 235

Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
           P    DK VS+VI+EMT GG DY FEC G   +MN+A  S++ GWG +V++GV   G+ +
Sbjct: 236 PKDS-DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVP-PGAEL 293

Query: 314 SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           S+   +++ GR+  G++FGG K RSD+  L  KY++K
Sbjct: 294 SIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  398 bits (1024), Expect = e-138
 Identities = 180/341 (52%), Positives = 220/341 (64%), Gaps = 12/341 (3%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           I CKAA+    GKPL IEE+EV PPKA E+RIKIL T +CH+D     S  D P+   PV
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTL-SGAD-PEGLFPV 58

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYR 129
           I GHE  G+VESVGE V  VK  D V+P++  +CGEC+ CKS K+N C K     G+G  
Sbjct: 59  ILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGL- 117

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             MP DGTSRF   KG  I+HF+  S+F+EY+VV    V KI P  PL   CLL CGV+T
Sbjct: 118 --MP-DGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTT 173

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G GA    A VE GSTVA+FGLGAVGLAV +GA+   AS+IIG+DINP+KFE+ KKFG T
Sbjct: 174 GYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT 233

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           D +NP    DK + QV+ EMTDGG DY FECIG   VM  A  +  +GWG +VI+GV   
Sbjct: 234 DCVNPKDH-DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAA 292

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           G  IS    +++ GR   GT FGG K RS +  L + Y+  
Sbjct: 293 GQEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKG 333

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  371 bits (954), Expect = e-128
 Identities = 164/341 (48%), Positives = 203/341 (59%), Gaps = 5/341 (1%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+   P KP  IEEIEV PPKA E+RIKI+ T +C SD             
Sbjct: 2   AGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL---VT 58

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           P PVI GHEA G+VESVGE V  VK  D V+P+F   CG+CR C + +SN C K   G  
Sbjct: 59  PFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKP 118

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             + +DGTSRF   KG  IHHFL  S+F+EY+VVD   V KI    PL   CL+ CG ST
Sbjct: 119 QGLMQDGTSRF-TCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFST 177

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G GAA   A V  GST A+FGLG VGL+   G +   AS+II VDIN +KF   K+ G T
Sbjct: 178 GYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGAT 237

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+ EMTDGG D+ FE IG    M  A  S  EG+G +VI+GV   
Sbjct: 238 ECINPQDY-KKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   Y+ K
Sbjct: 297 SQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAK 337

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  370 bits (950), Expect = e-127
 Identities = 173/347 (49%), Positives = 225/347 (64%), Gaps = 7/347 (2%)

Query: 5   SASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST 64
           S+S     VI C+AA+    G+ LV+EE+EV PP+  EIRIK++ TSLC SD++ W+S  
Sbjct: 2   SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA 61

Query: 65  DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124
             P+     IFGHEA G+VES+GE V E ++ D VL +F  +CG CR C S KSN C   
Sbjct: 62  LFPR-----IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVL 116

Query: 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
           G   +  M  D  +RF  +KG  ++H+  +SSF+EY+VV     VK+ P  PL   CLLS
Sbjct: 117 GLERKGVMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLS 175

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
           CGV+ G+GAAW VA V  GS+V IFGLG VGL+VA+GA+L  AS+IIGVDINPEK E  K
Sbjct: 176 CGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
            FG+TDFINP     + + QVIK MT GGADY FEC+G T +   A  S  +GWG TV L
Sbjct: 236 TFGVTDFINPNDL-SEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTL 294

Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKV 351
           GV      +S +    L GR++ G+ FGG KP+SD+ +L  KY++K 
Sbjct: 295 GVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKE 341

Length = 378

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  342 bits (879), Expect = e-116
 Identities = 154/340 (45%), Positives = 206/340 (60%), Gaps = 15/340 (4%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           ++ +AA+ R  GKPL IEE++++PP+A E+ ++I  T +CH+D      S D P+   P 
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHT--LSGDDPE-GFPA 57

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYR 129
           + GHE  G+VE+VGE V  VK  D V+ +F  +CG+C+ C S K N C       G+G  
Sbjct: 58  VLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM 117

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
           P    DGT+R     G  ++H+L  S+F EY+VV    +VKI P  PL  ACLL CGV+T
Sbjct: 118 P----DGTTRL-SGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTT 172

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G+GA    A VE G TVA+FGLG VGLA  +GA+   A +II VDINPEK E+ KKFG T
Sbjct: 173 GIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGAT 232

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
            F+NP    D  V + I E+TDGGADY FEC+G   VM  A  ++    G +VI+GV   
Sbjct: 233 HFVNPKEVDD--VVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGA 289

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD 349
           G  IS    +++ GR   G+ FGG +PRSDI  L   Y+ 
Sbjct: 290 GQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMA 329

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  335 bits (861), Expect = e-114
 Identities = 160/336 (47%), Positives = 206/336 (61%), Gaps = 7/336 (2%)

Query: 16  CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
           CKAA+    GKPL IEEIEV PPKA E+RIK++ T +CH+D+        LP  PLPVI 
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHV--IDGKLPT-PLPVIL 57

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPR 134
           GHE  G+VES+G  V  +K  D V+P+F   CG+C+ C + + N CSK  G   R  M  
Sbjct: 58  GHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS- 116

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
           DGTSRF   KG  IHHFL  S+F EY+VV    + KI P  PL   CL+ CG STG GAA
Sbjct: 117 DGTSRF-TCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAA 175

Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
              A V  GST A+FGLG VGL+V  G +   AS+II VDIN +KFE  K+ G T+ INP
Sbjct: 176 VNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINP 235

Query: 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 314
               DK + +V+ EMTDGG DY FE IG    +  A +++R G G +V++GV   G+  +
Sbjct: 236 RD-QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEAT 294

Query: 315 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           L+  ++L GR++ GT FGG K +  +  L   Y  K
Sbjct: 295 LDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  318 bits (817), Expect = e-107
 Identities = 153/338 (45%), Positives = 216/338 (63%), Gaps = 12/338 (3%)

Query: 15  RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           + +AA+    G+PL IEE++VE P+  E+ ++I+ T +CH+D  F  S  D P+   PVI
Sbjct: 1   KSRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDA-FTLSGAD-PEGVFPVI 58

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRP 130
            GHE  G+VE+VGE V  VK  D V+P++  +CGEC+ C S K+N C       G+G  P
Sbjct: 59  LGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118

Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
               DGTSRF    G  I+H++  S+F+EY+VV    + KI P  PL   CLL CGV+TG
Sbjct: 119 ----DGTSRF-SKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTG 173

Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
           +GA    A VE G TVA+FGLG +GL+V +GAR+ +AS+II +DINP KFE+ KK G TD
Sbjct: 174 IGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATD 233

Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
            +NP    DK + +VI E+TDGG DY FECIG  +VM  A     +GWG+++I+GV   G
Sbjct: 234 CVNPND-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG 292

Query: 311 SPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYL 348
             IS    +++ GR   G+ FGG+K R+++  + ++Y+
Sbjct: 293 QEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYM 330

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  312 bits (801), Expect = e-104
 Identities = 133/335 (39%), Positives = 182/335 (54%), Gaps = 11/335 (3%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           +AA+    GKPL IEE+E++ P   E+ ++I    LCHSD+       DLP  PLP + G
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTG--DLP-APLPAVLG 58

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           HE  GVVE VG  V  VK  D V+  +   CG CR C   + N C   G G       DG
Sbjct: 59  HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDL-GAGILGGQLPDG 117

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
           T RF    G+ +     + +F EY+VV    VVKI   IPL  A LL CGV+TGVGA   
Sbjct: 118 TRRFT-ADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVN 176

Query: 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256
            A V  G TVA+ G G VGL   +GAR+  AS+II VD  PEK E+ ++FG T  +N   
Sbjct: 177 TARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNA-- 234

Query: 257 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
             +    + ++++TDG GADY FE +G  + +  A   +R+G G  V++G+   G  +SL
Sbjct: 235 -SEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSL 292

Query: 316 NSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLD 349
            ++E+ L  + + G+ +G   PR DI  L   Y  
Sbjct: 293 PALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRA 327

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  251 bits (643), Expect = 8e-81
 Identities = 117/340 (34%), Positives = 178/340 (52%), Gaps = 18/340 (5%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           ++  AA+ R PG P V+E++E++ P+  E+ ++I+ T +CH+D+        LP  PLP 
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVV--RDGGLP-TPLPA 57

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYR 129
           + GHE  GVVE+VG  V  +K  D V+  F   CGEC +C S     C  F      G R
Sbjct: 58  VLGHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRR 116

Query: 130 PNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVS 188
           P    DG++      G  +H HF   SSF  Y+VV   +VVK+   +PL +   L CG+ 
Sbjct: 117 P----DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQ 172

Query: 189 TGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
           TG GA   V     GS++A+FG GAVGLA    A++   + II VDI   + E+ K+ G 
Sbjct: 173 TGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA 232

Query: 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
           T  INP       +   I+E+T GG DY  +  G+ +V+  A ++     G   ++G   
Sbjct: 233 THVINPKEED---LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPP 288

Query: 309 HGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKY 347
            G+ ++L+  ++L  G+++ G   G   P+  I  L + Y
Sbjct: 289 PGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELY 328

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  238 bits (610), Expect = 7e-76
 Identities = 123/319 (38%), Positives = 176/319 (55%), Gaps = 15/319 (4%)

Query: 26  KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85
           +PLVIEE+E++PP   E+ +KI    LCHSD++      D P+ PLP+  GHEA GVV  
Sbjct: 19  RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING--DRPR-PLPMALGHEAAGVVVE 75

Query: 86  VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD---GTSRFRE 142
           VGE V +++  D V+ +F   CG CR C   +   C     G   N       G  R R 
Sbjct: 76  VGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALC---EPGAAANGAGTLLSGGRRLRL 132

Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 202
             G++ HH L +S+F EY+VV    VVKI   +PL IA L  C V TGVGA    AGV  
Sbjct: 133 RGGEINHH-LGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRP 191

Query: 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 262
           G +VA+ GLG VGL+   GA    AS+++ VD+N +K  + ++ G T  +N    GD   
Sbjct: 192 GQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNA---GDPNA 248

Query: 263 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL- 321
            + ++E+T GG DY FE  G    +  A+  +R G G TV  G+    + +S+ ++ ++ 
Sbjct: 249 VEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVA 307

Query: 322 KGRSVCGTYFGGLKPRSDI 340
           + R++ G+Y G   PR DI
Sbjct: 308 EERTLKGSYMGSCVPRRDI 326

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  219 bits (560), Expect = 2e-68
 Identities = 128/337 (37%), Positives = 180/337 (53%), Gaps = 15/337 (4%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIF 75
           KAA+   PG+P  +EEIE++ PKA E+ +K++ + LCHSD       T DLP    P++ 
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSD---EHLVTGDLPMPRYPILG 59

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           GHE  GVV  VG  V  VK  D V+  F   CG CR C +   N C         +   D
Sbjct: 60  GHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISD 119

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
           GT RF     DV    L + +F+EY+VV    VVKI   IPL  ACL+ CGV TG G+A 
Sbjct: 120 GTYRFHADGQDVGQMCL-LGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAV 178

Query: 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255
            +A V  G TV + G+G VG+   +GA +  A K+I VD    K E   KFG T     A
Sbjct: 179 NIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF--A 236

Query: 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLT--SVMNDAFNSSREGWGKTVILGV-EMHGS 311
           +  +    Q+++E+T+G GAD     +G      + +A +++R+G G+ V+ G+  M   
Sbjct: 237 SMEEAV--QLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADV 293

Query: 312 PISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKY 347
            + +N  E+ L  + + GT FGG  PR+DI  L + Y
Sbjct: 294 DVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELY 330

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  190 bits (485), Expect = 2e-57
 Identities = 111/334 (33%), Positives = 159/334 (47%), Gaps = 18/334 (5%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+ + P  PL IEEI V  PK  EI I++    +CHSD+   K   +LP  P P + G
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKG--ELP-FPPPFVLG 58

Query: 77  HEAVGVVESVGEYVE---EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNM 132
           HE  G V  VG  VE    +   D V+  F   CG+CR C   K N C  F    R    
Sbjct: 59  HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGT 118

Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVG 192
             DGT+R   L G  ++ +       EY+VV  T +  +   +    + +L C   T  G
Sbjct: 119 LYDGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYG 177

Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
           A    A V  G TVA+ G+G VG +  + A+   AS II VD+  EK    K+ G T  +
Sbjct: 178 ALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237

Query: 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS 311
           N A    +     I+E+T G G D   E +G       A +  R+G G+ V++G+   G+
Sbjct: 238 NAA---KEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGA 293

Query: 312 --PISLNSIEILKGRSVCGTYFGGLKPRSDIATL 343
              I +  + + +G  + G+Y  G +PR D+  L
Sbjct: 294 TAEIPITRL-VRRGIKIIGSY--GARPRQDLPEL 324

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  169 bits (431), Expect = 2e-50
 Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 32/294 (10%)

Query: 42  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 101
           E+ +++    LC +D+   +     P   LP+I GHE  GVV  VG  V  VK  D V+ 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRG-GYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVV 59

Query: 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161
           + +  CG C  C+          G         DG                    F EY 
Sbjct: 60  LPNLGCGTCELCR-----ELCPGGGILGEG--LDGG-------------------FAEYV 93

Query: 162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEG 221
           VV   ++V +   + L  A LL   ++T   A  +   ++ G TV + G G VGL  A+ 
Sbjct: 94  VVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL 153

Query: 222 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281
           A+    +++I  D + EK E+ K+ G    I+      +   + ++    GGAD   + +
Sbjct: 154 AKA-AGARVIVTDRSDEKLELAKELGADHVIDYKEEDLE---EELRLTGGGGADVVIDAV 209

Query: 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335
           G    +  A    R G G+ V++G    G P+      + K  ++ G+  G  +
Sbjct: 210 GGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE 262

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  168 bits (428), Expect = 4e-49
 Identities = 109/335 (32%), Positives = 160/335 (47%), Gaps = 20/335 (5%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIF 75
           +  I R  G P+ +E I V  P   E+ + I    +CH+D+ + +    D      P + 
Sbjct: 3   RGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND----EFPFLL 58

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           GHEA GVVE+VGE V +V   D V+  +   CG+CR CK  +   C       +     D
Sbjct: 59  GHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTD 118

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
           GT    EL        L I +F E ++V      K+ P      A LL CGV  G+GAA 
Sbjct: 119 GT----ELSPA-----LGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAV 169

Query: 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255
              GV+ G +VA+ G G VG A   GA L  ASKII VDI+  K E  ++FG T  +N +
Sbjct: 170 NTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN-S 228

Query: 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 314
           +  D    + I+ +T G GAD   + +G       AF  +R+  G  V++GV      + 
Sbjct: 229 SGTD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPDMTLE 285

Query: 315 LNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYL 348
           L  +++  +G ++  +++G   P  D   L   YL
Sbjct: 286 LPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYL 320

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  165 bits (419), Expect = 6e-48
 Identities = 103/327 (31%), Positives = 144/327 (44%), Gaps = 49/327 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+ +  G+PL IEE+ V  P   E+ IK+    +CH+D+   K   D P   LP+I G
Sbjct: 5   KAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKG--DWPVPKLPLIPG 62

Query: 77  HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPR 134
           HE VG V  VGE V  +K  D V +      CGEC  C+S   N C ++   GY      
Sbjct: 63  HEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT----T 118

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
           DG                    + EY VV   +VVKI   + L  A  L C   T   A 
Sbjct: 119 DG-------------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL 159

Query: 195 WKVAGVEVGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
            K A V+ G  VA+ G G +G      A A GA       +I +  + EK E+ KK G  
Sbjct: 160 -KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGAE------VIAITRSEEKLELAKKLGAD 212

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
             IN +   D    + +KE+    AD   + +G  + +  +  + R G G  V++G+   
Sbjct: 213 HVINSS---DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGG 263

Query: 310 GSPISLN-SIEILKGRSVCGTYFGGLK 335
           G    L   + ILK  S+ G+  G   
Sbjct: 264 GPIPLLPAFLLILKEISIVGSLVGTRA 290

Length = 339

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  153 bits (388), Expect = 2e-43
 Identities = 88/325 (27%), Positives = 137/325 (42%), Gaps = 29/325 (8%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+  + G  + +EE     P   ++ I++  T +C SD+  ++           +I G
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPG-DIILG 60

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           HE VG V  VG  V   K  D V+   +  CG CR C++ + N C         N    G
Sbjct: 61  HEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLC--------ENPGFYG 111

Query: 137 TS-RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP-HIPLGIACLLSCGVSTGVGAA 194
            +     + G           F EY  V     +   P  I    A  L+  ++T     
Sbjct: 112 YAGLGGGIDG----------GFAEYVRVPADFNLAKLPDGIDEEAA-ALTEPLATAYHGH 160

Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
            + A V  G TV + G G +GL     A+L  AS +I VD +PE+ E+ K+ G  D +  
Sbjct: 161 AERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVN 220

Query: 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
            +  D      I E+T G GAD   E +G    ++ A  + R G G  V++GV   G  I
Sbjct: 221 PSEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGV-YGGEDI 276

Query: 314 SLNSIEIL-KGRSVCGTYFGGLKPR 337
            L +  ++ K  ++ G+     +  
Sbjct: 277 PLPAGLVVSKELTLRGSLRPSGRED 301

Length = 350

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  150 bits (382), Expect = 2e-42
 Identities = 85/325 (26%), Positives = 143/325 (44%), Gaps = 31/325 (9%)

Query: 16  CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
            +AA+   PGKPL I E+ +   +   + +++    +C SDV         P++PLP+I 
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAG--RRPRVPLPIIL 58

Query: 76  GHEAVGVVESVGEYV------EEVKERDLVLPIFHRDCGECRDCKSSKSNTC-SKFGRGY 128
           GHE VG V ++G  V      E +K  D V       CG C  C       C ++   G+
Sbjct: 59  GHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGH 118

Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGV 187
             +      S                  + E+  +   T +V++  ++P  +A   +C +
Sbjct: 119 EASCDDPHLS----------------GGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCAL 162

Query: 188 STGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
           +T V AA   AG V  G TV + G G +GL     A+L  A ++I +D +PE+ E+ ++F
Sbjct: 163 AT-VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREF 221

Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           G    I+     D     +++++T G GAD   E  G  + + +     R G G  V++G
Sbjct: 222 GADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVG 280

Query: 306 VEMHGSPISLNSIEI-LKGRSVCGT 329
                  + L+   I  K  ++ G 
Sbjct: 281 SVAPAGTVPLDPERIVRKNLTIIGV 305

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  147 bits (374), Expect = 2e-41
 Identities = 91/327 (27%), Positives = 137/327 (41%), Gaps = 50/327 (15%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+   P   + +EE+ V  P   E+ +K+    +C +DV   +      K P   I G
Sbjct: 2   KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPR--ILG 58

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC---SKFGRGYRPNMP 133
           HE  G +  VG+ V   K  D V    H  CGEC  C     N C    KFG  Y     
Sbjct: 59  HEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLY----- 113

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK-ITPHIPLGI----ACL---LSC 185
            DG                    F EY  V    V +     +P  +    A L   L+C
Sbjct: 114 -DG-------------------GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLAC 153

Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
            +      A + AG++ G TV + G G +GL  A  A+ + A K+I  D+N  + E  KK
Sbjct: 154 CI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK 208

Query: 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
            G    I+ A   ++ + + ++E+TDG GAD      G       A    R+G G+ +  
Sbjct: 209 LGADYTIDAA---EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFF 264

Query: 305 GVEMHGSPISLNSIEIL-KGRSVCGTY 330
           G    GS ++++   I  +  ++ G+Y
Sbjct: 265 GGLPKGSTVNIDPNLIHYREITITGSY 291

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  146 bits (372), Expect = 5e-41
 Identities = 89/312 (28%), Positives = 137/312 (43%), Gaps = 45/312 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA +   PG+ L +EE+ V  P   E+ IK+    +C +D+  ++          P++ G
Sbjct: 2   KALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEG---EFGAAPPLVPG 57

Query: 77  HEAVGVVESVGEYVEEVKERDLVL--P-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           HE  GVV +VG  V   K  D V   P I+   CGEC  C+  + N C            
Sbjct: 58  HEFAGVVVAVGSKVTGFKVGDRVAVDPNIY---CGECFYCRRGRPNLCENLT-AVGVT-- 111

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTG 190
           R+G                    F EY VV    V KI  ++    A L   LSC V   
Sbjct: 112 RNG-------------------GFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH-- 150

Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
                 + G++ G +V +FG G +GL +A+  +LN AS++   + N EK E+ KK G T+
Sbjct: 151 ---GLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATE 207

Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
            ++P     +   +  KE    G D   E  G+   +  A   +R G G  ++ GV    
Sbjct: 208 TVDP----SREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPD 262

Query: 311 SPISLNSIEILK 322
           + +S++  EI +
Sbjct: 263 ARVSISPFEIFQ 274

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  145 bits (368), Expect = 3e-40
 Identities = 85/320 (26%), Positives = 133/320 (41%), Gaps = 58/320 (18%)

Query: 30  IEEIEVEPPKAWEIRIKILCTSLCHSDV-------TFW--KSSTDLPKLPLPVIFGHEAV 80
           +EE+   P K  E++IK+    +C SD+        F   +    L     PV  GHE  
Sbjct: 14  VEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFS 73

Query: 81  GVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 138
           GVV  VG  V   K  D V+  P     CG C  CK    N C   G             
Sbjct: 74  GVVVEVGSGVTGFKVGDRVVVEPTIK--CGTCGACKRGLYNLCDSLG------------- 118

Query: 139 RFRELKGDVIHHFLNISS----FTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGV 191
                       F+ +      F EY VV   HV K+  ++PL  A L   L+       
Sbjct: 119 ------------FIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWH--- 163

Query: 192 GAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251
             A + +G + G T  + G G +GL      +   ASKII  + +  + E+ ++ G T  
Sbjct: 164 --AVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIV 221

Query: 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
           ++P       V   ++++T G G D  F+C G+ + ++ A ++ R   G  V + +    
Sbjct: 222 LDPTEVD---VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAI--WE 275

Query: 311 SPISLNSIEI-LKGRSVCGT 329
            PIS N  ++ LK +++ G+
Sbjct: 276 KPISFNPNDLVLKEKTLTGS 295

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  143 bits (364), Expect = 5e-40
 Identities = 102/314 (32%), Positives = 145/314 (46%), Gaps = 38/314 (12%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAAI   P KPL IEE+    P   E+ IK+    +C+ D+ FWK     P+   P+I G
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGF--FPRGKYPLILG 59

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           HE VG VE VGE VE  K  D V+  ++  CG+C  C S + N C               
Sbjct: 60  HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC--------------- 104

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
             R R   G+ +        F EY  V    +VK+  ++    A L +C V T V A  K
Sbjct: 105 --RNRAEYGEEVDGG-----FAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-K 156

Query: 197 VAGVEVGSTVAI-FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255
            AGV+ G TV +    G VG+   + A+    +++I V  +PEK +I K+ G    I+  
Sbjct: 157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKA-LGARVIAVTRSPEKLKILKELGADYVID-- 213

Query: 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
             G K    V K    GGAD   E +G +  + ++  S  +G G+ V++G  +   P  L
Sbjct: 214 --GSKFSEDVKKL---GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIG-NVTPDPAPL 265

Query: 316 NSIE-ILKGRSVCG 328
                ILK   + G
Sbjct: 266 RPGLLILKEIRIIG 279

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  143 bits (362), Expect = 1e-39
 Identities = 90/351 (25%), Positives = 138/351 (39%), Gaps = 58/351 (16%)

Query: 25  GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 84
              LV+EE+ V  P   E+ +K+    +CHSD+             LP+  GHE  G V 
Sbjct: 11  KGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHIL-DGGVPTLTKLPLTLGHEIAGTVV 69

Query: 85  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 144
            VG  V   K  D V       CG C  C+  + N C        P +  DG        
Sbjct: 70  EVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCL---NQGMPGLGIDGG------- 119

Query: 145 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 204
                       F EY VV    +V +   +P   A + +  V T   A  +   V+ G 
Sbjct: 120 ------------FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGE 167

Query: 205 TVAIFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259
           TV + GLG +GL     A A GA       +I VDI  EK E+ K+ G  + +N     D
Sbjct: 168 TVLVIGLGGLGLNAVQIAKAMGA------AVIAVDIKEEKLELAKELGADEVLNSL---D 218

Query: 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 319
            +          GG D  F+ +G      DA  + + G G+ V++G+      + L+ + 
Sbjct: 219 DSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSDL- 276

Query: 320 ILKGRSVCGTYFGG----------------LKPRSDIATLAQ--KYLDKVH 352
           I +   + G++ GG                L P+ +   L +  + L+++H
Sbjct: 277 IARELRIIGSF-GGTPEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLERLH 326

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  142 bits (361), Expect = 2e-39
 Identities = 81/296 (27%), Positives = 126/296 (42%), Gaps = 40/296 (13%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           +AA+    G+PL I E+    P    + +++    +C SD   W+       LP   + G
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPH--VPG 59

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           HE  GVV  VGE V   +  D V   F   CG C  C++  SN C       +P     G
Sbjct: 60  HEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCE---HQVQPGFTHPG 116

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
                              SF EY  V     ++V++   +    A  L C  +T   A 
Sbjct: 117 -------------------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157

Query: 195 WKVAGVEVGSTVAIFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
              A V+ G  VA+ G G VGL     A A GAR      +I VDI+ +K E+ ++ G  
Sbjct: 158 VHQARVKPGEWVAVHGCGGVGLSAVMIASALGAR------VIAVDIDDDKLELARELGAV 211

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
             +N +    + V+  ++++T GGA    + +G+     ++  S R+  G+ V +G
Sbjct: 212 ATVNAS--EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVG 264

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  142 bits (360), Expect = 3e-39
 Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 48/323 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA +   PG  L  E+I    P   E+ +K+    +C SD+  +  +        P++ G
Sbjct: 2   KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG---AYHPPLVLG 57

Query: 77  HEAVGVVESVGEYVEEVKERDLV--LPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPN 131
           HE  G VE VG  V+++   D V   P+    CG+C  CK  + + CS     G      
Sbjct: 58  HEFSGTVEEVGSGVDDLAVGDRVAVNPLLP--CGKCEYCKKGEYSLCSNYDYIG------ 109

Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
             RDG                   +F EY  V   +++KI  H+    A ++    +  +
Sbjct: 110 SRRDG-------------------AFAEYVSVPARNLIKIPDHVDYEEAAMIE-PAAVAL 149

Query: 192 GAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251
            A    AG+ +G TV + G G +GL   +  ++  A ++I VDI+ EK  + ++ G  D 
Sbjct: 150 HAVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDT 208

Query: 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV---E 307
           INP     +     ++E+T+G GAD   E  G  + +  A   +R G GK V++G+   +
Sbjct: 209 INPKEEDVEK----VRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGD 263

Query: 308 MHGSPISLNSIEILKGRSVCGTY 330
           +  S  +   I + K  ++ G++
Sbjct: 264 VTLSEEAFEKI-LRKELTIQGSW 285

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  142 bits (360), Expect = 3e-39
 Identities = 91/333 (27%), Positives = 138/333 (41%), Gaps = 57/333 (17%)

Query: 16  CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPV 73
            KAA+    G KP  ++++ V  P   E+ +K+  + +CH+D+       D P K  LP+
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALG--DWPVKPKLPL 58

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
           I GHE  GVV +VG  V  +K  D V +   +  CG+C  C++     C       + N 
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN-----QKNS 113

Query: 133 PR--DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
               DGT                   F EY++ D  +V  I   +    A  L C   T 
Sbjct: 114 GYTVDGT-------------------FAEYAIADARYVTPIPDGLSFEQAAPLLCAGVT- 153

Query: 191 VGAAWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
           V  A K AG++ G  V I G G       V  A A G R      +I +D+  EK E+ K
Sbjct: 154 VYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLR------VIAIDVGDEKLELAK 207

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
           + G   F++          + +KE+T G GA          +    A +  R G G  V 
Sbjct: 208 ELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVC 263

Query: 304 LGV----EMHGSPISLNSIEILKGRSVCGTYFG 332
           +G+     +   P  L    +L+G ++ G+  G
Sbjct: 264 VGLPPGGFIPLDPFDL----VLRGITIVGSLVG 292

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  141 bits (359), Expect = 4e-39
 Identities = 92/314 (29%), Positives = 141/314 (44%), Gaps = 50/314 (15%)

Query: 17  KAAICRIPGKPLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           KA +C    KP  +E +++  P   A E+ +++    +C SD+  +      P    P I
Sbjct: 2   KALVCE---KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRN--PFASYPRI 56

Query: 75  FGHEAVGVVESVGEYVEEVKERDLV--LPIFHRDCGECRDCKSSKSNTCSK---FGRGYR 129
            GHE  G V  VGE V  +K  D V   P     CGEC  C+  + N C      G    
Sbjct: 57  LGHELSGEVVEVGEGVAGLKVGDRVVVDPYIS--CGECYACRKGRPNCCENLQVLG---- 110

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             + RDG                    F EY VV    ++ +   + L  A L+   ++ 
Sbjct: 111 --VHRDGG-------------------FAEYIVVPADALL-VPEGLSLDQAALVEP-LAI 147

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G  A  + AGV  G TV + G G +GL V + A+  R +++I VDI+ E+ E  ++ G  
Sbjct: 148 GAHAVRR-AGVTAGDTVLVVGAGPIGLGVIQVAKA-RGARVIVVDIDDERLEFARELGAD 205

Query: 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
           D IN    GD+ V+  ++E+TDG GAD   +  G  + M +A      G G+ V++G+  
Sbjct: 206 DTINV---GDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGL-- 259

Query: 309 HGSPISLNSIEILK 322
              P++    E  K
Sbjct: 260 SKGPVTFPDPEFHK 273

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  140 bits (354), Expect = 2e-38
 Identities = 101/306 (33%), Positives = 135/306 (44%), Gaps = 39/306 (12%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIR---IKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           KA +   PGK   I   EV  PK        +++  TS+C SD+  ++     P     +
Sbjct: 2   KALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGV--PGAKHGM 56

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           I GHE VG V  VG  V+ +K  D V       CG CR C+      C     G++    
Sbjct: 57  ILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR 116

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVV---DITHVVKITPHIPLGIACLLSCGVSTG 190
            DG                      EY  V   D  ++ KI   +P   A +LS  + TG
Sbjct: 117 IDGG-------------------QAEYVRVPYAD-MNLAKIPDGLPDEDALMLSDILPTG 156

Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
              A ++AG++ GSTVA+ G G VGL    GARL  A++II VD NPE+ ++ K+ G TD
Sbjct: 157 FHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATD 215

Query: 251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
            INP       V Q I E+T G G D   E +G       A    R G G    +GV  +
Sbjct: 216 IINPK--NGDIVEQ-ILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGV--Y 269

Query: 310 GSPISL 315
           G P  L
Sbjct: 270 GKPDPL 275

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  133 bits (337), Expect = 5e-36
 Identities = 86/327 (26%), Positives = 137/327 (41%), Gaps = 34/327 (10%)

Query: 28  LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
           + + E  V  P   E+ +++  + LC SD+ ++      P     VI GHE  GVV +VG
Sbjct: 12  VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQ-GVIPGHEPAGVVVAVG 70

Query: 88  EYVEEVKERDLVLPIFHRD-CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGD 146
             V   +  D V+  +H   CG CR+C+      C+     Y  N  RDG          
Sbjct: 71  PGVTHFRVGDRVMV-YHYVGCGACRNCRRGWMQLCTSKRAAYGWN--RDG---------- 117

Query: 147 VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTV 206
                       EY +V    ++ +   +      LL CG+ T    A +  GV    TV
Sbjct: 118 ---------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YHALRRVGVSGRDTV 167

Query: 207 AIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266
            + G G VGL     AR   A  +IGVD +PE+ E+ K  G    IN      + + ++ 
Sbjct: 168 LVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELT 227

Query: 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGR 324
                 GAD   EC G T+    A  + R  WG+ V++G    G  +++      I K R
Sbjct: 228 S---GAGADVAIECSGNTAARRLALEAVRP-WGRLVLVG---EGGELTIEVSNDLIRKQR 280

Query: 325 SVCGTYFGGLKPRSDIATLAQKYLDKV 351
           ++ G+++  +    + A    ++  +V
Sbjct: 281 TLIGSWYFSVPDMEECAEFLARHKLEV 307

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  131 bits (333), Expect = 2e-35
 Identities = 84/301 (27%), Positives = 126/301 (41%), Gaps = 62/301 (20%)

Query: 26  KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVE 84
             L +EE  +  P   E+ +++    +C SDV ++K        +  P++ GHE+ G V 
Sbjct: 8   GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVV 67

Query: 85  SVGEYVEEVKERDLV-----LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM------P 133
           +VG  V  +K  D V     +P     C  C  CKS + N C        P+M      P
Sbjct: 68  AVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLC--------PDMRFAATPP 114

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI-----ACL--LSCG 186
            DGT                      Y    + H       +P  +     A +  LS G
Sbjct: 115 VDGT-------------------LCRY----VNHPADFCHKLPDNVSLEEGALVEPLSVG 151

Query: 187 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
           V      A + AGV  G TV +FG G +GL  A  A+   A+K++  DI+P + E  K+ 
Sbjct: 152 V-----HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKEL 206

Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           G T  +N  T      ++ I E+  G G D   EC G  S +  A  ++R G G  V++G
Sbjct: 207 GATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVG 265

Query: 306 V 306
           +
Sbjct: 266 M 266

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  129 bits (326), Expect = 3e-34
 Identities = 87/336 (25%), Positives = 139/336 (41%), Gaps = 43/336 (12%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPV 73
           PGKPL   EI+   P   E+ +K+    +CHSD+  W    DL            + LP+
Sbjct: 9   PGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPL 68

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           + GHE VG V +VG    +VK  D VL      CGEC  C +   N C+K          
Sbjct: 69  VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAK---------- 118

Query: 134 RDGTSRFRELKGDVIHHFLNISS---FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
                             L I     + EY +V  +  +     +   +A  L+C   T 
Sbjct: 119 ---------------GRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTA 163

Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
             A  K+  +     V I G G +GL      +    + II VDI+  K E  K  G   
Sbjct: 164 YSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADV 223

Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
            +N +   D   ++ I +   GG D   + +  ++  + AF+   +G GK V++G+    
Sbjct: 224 VVNGS---DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGE 279

Query: 311 SPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK 346
           + + L  +  L+  ++ G+Y G L+   ++  LA+ 
Sbjct: 280 ATLPLPLL-PLRALTIQGSYVGSLEELRELVALAKA 314

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  127 bits (322), Expect = 1e-33
 Identities = 79/307 (25%), Positives = 122/307 (39%), Gaps = 32/307 (10%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-TFWKSSTDLPKLPLPVIF 75
           KA      GK   IE+  +      +  ++    + C SDV T W      P     +I 
Sbjct: 2   KAFAMLGIGKVGWIEK-PIPVCGPNDAIVRPTAVAPCTSDVHTVW---GGAPGERHGMIL 57

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           GHEAVGVVE VG  V++ K  D V+             +    +       G++ +  +D
Sbjct: 58  GHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD 117

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGVSTGVGA 193
           G                    F EY  V+    ++  +   +    A +L   +STG   
Sbjct: 118 GV-------------------FAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG 158

Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
           A ++A +++G TVA+FG+G VGL    GARL  A +II V   P + E+ K++G TD ++
Sbjct: 159 A-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217

Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
                   V Q I ++T G G D      G       A    + G G    +        
Sbjct: 218 YKNGD--VVEQ-ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDY 273

Query: 313 ISLNSIE 319
           + +   E
Sbjct: 274 LPIPREE 280

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  121 bits (307), Expect = 1e-31
 Identities = 95/316 (30%), Positives = 127/316 (40%), Gaps = 50/316 (15%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-----TFWKSSTDLPKLPLPVIFGHE 78
            G    + E+ V  P   E+ IK+L  S+C +DV       W  S   P    P+IFGHE
Sbjct: 9   AGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP----PLIFGHE 64

Query: 79  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRD 135
             G V  VGE V  VK  D V    H  CG+C  C++   + C      G      +  D
Sbjct: 65  FAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG------VDTD 118

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVG 192
           G                    F EY VV   ++ K    IP  IA +   L   V T + 
Sbjct: 119 GC-------------------FAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL- 158

Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
                AG   G +V I G G +GL     A+   AS +I  D NP + E+ KK G    I
Sbjct: 159 -----AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVI 213

Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
           NP    ++ V +V       G D   E  G    +     +   G G+  ILG+      
Sbjct: 214 NP---REEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVD 269

Query: 313 ISLNSIEILKGRSVCG 328
           I LN++ I KG +V G
Sbjct: 270 IDLNNLVIFKGLTVQG 285

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  120 bits (304), Expect = 2e-31
 Identities = 90/324 (27%), Positives = 133/324 (41%), Gaps = 43/324 (13%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+    G PL  EE+ V  P   E+ IKI    +CH+D+   +   D      P++ G
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEG--DWGGSKYPLVPG 58

Query: 77  HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPR 134
           HE VG V  VG  VE  K  D V +      CG C  C+    N C K    GY      
Sbjct: 59  HEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT----T 114

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
            G                    + EY V D  + V +   +PL  A  L C   T V +A
Sbjct: 115 QG-------------------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT-VYSA 154

Query: 195 WKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRA--SKIIGVDINPEKFEIGKKFGITDF 251
            + AG   G  VA+ G+G +G LAV    +  RA   + + +  +P+K E+ +K G  + 
Sbjct: 155 LRDAGPRPGERVAVLGIGGLGHLAV----QYARAMGFETVAITRSPDKRELARKLGADEV 210

Query: 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS 311
           ++     D       ++   GGAD     +   +    A    R G G+ V++G+     
Sbjct: 211 VDSGAELD-------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPP 262

Query: 312 PISLNSIEILKGRSVCGTYFGGLK 335
                   I+K +S+ G+  GG  
Sbjct: 263 FSPDIFPLIMKRQSIAGSTHGGRA 286

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  114 bits (289), Expect = 4e-29
 Identities = 95/345 (27%), Positives = 146/345 (42%), Gaps = 44/345 (12%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS--STDLPKLPLPVI 74
           KAA     GKPL +E++ V  P   ++ +++    +CHSD+          LP   LP  
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPY-KLPFT 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVL---PIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
            GHE  G VE VG  V+ +KE D V+   P     CG CR C+  + N C        P 
Sbjct: 61  LGHENAGWVEEVGSGVDGLKEGDPVVVHPPWG---CGTCRYCRRGEENYCE---NARFPG 114

Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
           +  DG                    F EY +V    +VK+   +    A  L+    T  
Sbjct: 115 IGTDG-------------------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAY 155

Query: 192 GAAWKVAGV-EVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
            A  K     + GSTV + G+G +G +AV +  R    + +I VD + E  ++ ++ G  
Sbjct: 156 HAVKKALPYLDPGSTVVVIGVGGLGHIAV-QILRALTPATVIAVDRSEEALKLAERLGAD 214

Query: 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
             +N        V + ++E+T G GAD   + +G    +  A     +G G+ VI+G   
Sbjct: 215 HVLN----ASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGG 269

Query: 309 HGS-PISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVH 352
           HG  P S     +    SV G+ +G      ++  LA+    KV 
Sbjct: 270 HGRLPTSDL---VPTEISVIGSLWGTRAELVEVVALAESGKVKVE 311

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  114 bits (288), Expect = 5e-29
 Identities = 83/295 (28%), Positives = 129/295 (43%), Gaps = 47/295 (15%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA I     +   IEE+    P   E+ IK+    LC+ D+   +     P++  PVI G
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGF--YPRMKYPVILG 59

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           HE VG VE VGE V+  K  D V  + +   G C  C+S +   C               
Sbjct: 60  HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC--------------- 104

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
             + R   G+ +  F     F EY+ V +T +VK+ P++    A ++ C          +
Sbjct: 105 --KNRLGYGEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-R 156

Query: 197 VAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
            AGV+ G TV + G G      A+ +A A GA      K+I V  +  K +I  K+   D
Sbjct: 157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA------KVIAVTSSESKAKIVSKYA--D 208

Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           ++          S+ +K++  GGAD   E +G T  + ++  S   G GK + +G
Sbjct: 209 YV----IVGSKFSEEVKKI--GGADIVIETVG-TPTLEESLRSLNMG-GKIIQIG 255

Length = 334

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  114 bits (287), Expect = 9e-29
 Identities = 84/317 (26%), Positives = 133/317 (41%), Gaps = 48/317 (15%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTF-----WKSSTDLPKLPLPVIFGHE 78
               L + ++ V  P   ++ IK+  T++C +DV       W   T    +P+P++ GHE
Sbjct: 9   AEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKT----IPVPMVVGHE 64

Query: 79  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGT 137
            VG V  VG  V   K  D V    H  CG CR+C++ + + C    G G      R G 
Sbjct: 65  FVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVN----RPG- 119

Query: 138 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAA 194
                             +F EY V+   +V KI   IP  +A +       V T +  +
Sbjct: 120 ------------------AFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTAL--S 159

Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
           + +    VG  V I G G +G+  A  A+   A  ++  D+N  + E+ +K G T  +N 
Sbjct: 160 FDL----VGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215

Query: 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
           A    + +  V+ E+    G D   E  G  S      ++   G G+  +LG+      I
Sbjct: 216 A---KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAI 271

Query: 314 SLNSIEILKGRSVCGTY 330
             N + I KG ++ G Y
Sbjct: 272 DWNKV-IFKGLTIKGIY 287

Length = 341

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  111 bits (278), Expect = 1e-27
 Identities = 87/319 (27%), Positives = 129/319 (40%), Gaps = 51/319 (15%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTF-----WKSSTDLPKLPLPVIFGHE 78
           PG    + E+ V  P   E+ IK+L TS+C +DV       W  S     +  P + GHE
Sbjct: 7   PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR----IKPPQVVGHE 62

Query: 79  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRD 135
             G V  +G  VE +K  D V    H  CG+C  C+  + + C     FG      +  D
Sbjct: 63  VAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG------VDTD 116

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVG 192
           G                    F EY+VV   ++ K    IP   A +   L   V T + 
Sbjct: 117 GC-------------------FAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL- 156

Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
                AG   G +V + G G +GL     A+ + A  +I  D N  + E+ KK G T  +
Sbjct: 157 -----AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVV 211

Query: 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS 311
           NP     + V + + ++TDG G D   E  G    +     +   G G+  +LG+     
Sbjct: 212 NPF---KEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKV 267

Query: 312 PISLNSIEILKGRSVCGTY 330
            I   +  I KG ++ G  
Sbjct: 268 TIDFTNKVIFKGLTIYGIT 286

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  107 bits (269), Expect = 5e-26
 Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 45/307 (14%)

Query: 45  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
           +++  T++C SD+  +     +P +    I GHE +GVVE VG  V  +K  D V+  F 
Sbjct: 30  VRVTATAICGSDLHLY--HGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFT 87

Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHH---FLNISSFT--- 158
             CGEC  CK    + C             D T+   E+     H        S  T   
Sbjct: 88  IACGECFYCKRGLYSQC-------------DNTNPSAEMAKLYGHAGAGIFGYSHLTGGY 134

Query: 159 -----EYSVV---DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 210
                EY  V   D+    KI   +    A  LS  + TG  AA ++A V+ G TVA++G
Sbjct: 135 AGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG 192

Query: 211 LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270
            G VGL  A  A+L  A ++I +D  PE+ E+ +     + IN        V + ++E+T
Sbjct: 193 CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEV--DDVVEALRELT 250

Query: 271 DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILK--GR-S 325
            G G D C + +G+ +  +    + +        L  +    P +L  +I+ ++  G  S
Sbjct: 251 GGRGPDVCIDAVGMEAHGSPLHKAEQALLK----LETD---RPDALREAIQAVRKGGTVS 303

Query: 326 VCGTYFG 332
           + G Y G
Sbjct: 304 IIGVYGG 310

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  105 bits (263), Expect = 9e-26
 Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 43/285 (15%)

Query: 30  IEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
           +E  EV  P+    E+ IK+    +C SD+  +K   D  + P  V+ GHE  G +  VG
Sbjct: 14  VELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETP--VVLGHEFSGTIVEVG 71

Query: 88  EYVEEVKERDLVLPI-FHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTSRFRELKG 145
             VE  K  D V+       CG C  C+    N C  + G G +     DG         
Sbjct: 72  PDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ----ADG--------- 118

Query: 146 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWKVAGVEV 202
                      F EY +V    + ++  ++ L  A L   L+  V     A  + +G+  
Sbjct: 119 ----------GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVH----AVAERSGIRP 164

Query: 203 GSTVAIFGLGAVGLAVAEGARLNRASKII-GVDINPEKFEIGKKFGITDFINPATCGDKT 261
           G TV +FG G +GL  A+ A+L  A+ ++ G + +  + ++ K+ G          G++ 
Sbjct: 165 GDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA----VNGGEED 220

Query: 262 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           +++++ E+TDG GAD   EC G    +  A    R+G G+ V +G
Sbjct: 221 LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  105 bits (263), Expect = 2e-25
 Identities = 80/245 (32%), Positives = 106/245 (43%), Gaps = 37/245 (15%)

Query: 45  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
           +K+L T++C +D+   K   D+P +    I GHE VGVVE VG  V   K  D VL    
Sbjct: 30  VKMLKTTICGTDLHILKG--DVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCI 87

Query: 105 RDCGECRDCKSSKSNTCSKFG--RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 162
             CG C  C+    + C   G   G       DGT                     EY  
Sbjct: 88  SSCGTCGYCRKGLYSHCESGGWILGNLI----DGTQ-------------------AEY-- 122

Query: 163 VDITH----VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
           V I H    + K+   +    A +LS  + TG         V+ G TVAI G G VGLA 
Sbjct: 123 VRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAA 182

Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
              A+L   SKII VD++  + E+ KK G T  +N A        + + E+TDG G D  
Sbjct: 183 LLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA---KGDAIEQVLELTDGRGVDVV 239

Query: 278 FECIG 282
            E +G
Sbjct: 240 IEAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  102 bits (256), Expect = 2e-24
 Identities = 85/278 (30%), Positives = 127/278 (45%), Gaps = 36/278 (12%)

Query: 45  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
           I+++ T +C SD+  ++  +   + P P+  GHE VGVVE VG  V  VK  D V+  F 
Sbjct: 30  IRVVATCVCGSDLWPYRGVSP-TRAPAPI--GHEFVGVVEEVGSEVTSVKPGDFVIAPFA 86

Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164
              G C  C++  + +C   G         DG                    +    + D
Sbjct: 87  ISDGTCPFCRAGFTTSCVHGGFWGAFV---DGGQ----------------GEYVRVPLAD 127

Query: 165 ITHVVKITPHIPLGIACL------LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
            T +VK  P  P     L      LS  + TG  AA   AGV  GSTV + G GAVGL  
Sbjct: 128 GT-LVK-VPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCA 184

Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
              A+   A +II +  + ++  + ++FG TD +  A  G++ V++V +E+T G GAD  
Sbjct: 185 VLAAKRLGAERIIAMSRHEDRQALAREFGATDIV--AERGEEAVARV-RELTGGVGADAV 241

Query: 278 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
            EC+G    M  A   +R G G+   +GV   G  + +
Sbjct: 242 LECVGTQESMEQAIAIARPG-GRVGYVGVPHGGVELDV 278

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  101 bits (254), Expect = 2e-24
 Identities = 67/221 (30%), Positives = 91/221 (41%), Gaps = 43/221 (19%)

Query: 17  KAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSD--VTFWKSSTDLPKLP 70
           KA +   PG     PL + E+ V  P   E+ IK+    +C +D  +       DLP   
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIV----EGDLPPPK 57

Query: 71  LPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFG-RGY 128
           LP+I GHE VG VE+VG  V      D V +P     CGECR C+S + N C      GY
Sbjct: 58  LPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY 117

Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP-HIPLGIACLLSCGV 187
                 DG                    + EY V D      I   +     A LL  G+
Sbjct: 118 T----VDG-------------------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI 154

Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVG-----LAVAEGAR 223
             G   A K+AG++ G  + ++G GA       +A  +GA 
Sbjct: 155 -IGYR-ALKLAGLKPGQRLGLYGFGASAHLALQIARYQGAE 193

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  100 bits (250), Expect = 1e-23
 Identities = 85/331 (25%), Positives = 132/331 (39%), Gaps = 39/331 (11%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---- 65
            GK+    + + R P   L +E++ V   K  EI I++    +C SD+  +++  D    
Sbjct: 23  EGKLTNLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYIL 80

Query: 66  LPKLP-LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124
            P L   PV+ GHE  GVVE  G+ V+  ++ D V       CG CR C+S   N C   
Sbjct: 81  YPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNL 140

Query: 125 GR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG----- 178
              G+      DG                   +F EY  V+  +  +I     +      
Sbjct: 141 KELGFS----ADG-------------------AFAEYIAVNARYAWEINELREIYSEDKA 177

Query: 179 -IACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236
             A  L    S      +   G    G+ V ++G G +GLA    A+   ASK+I  +I+
Sbjct: 178 FEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEIS 237

Query: 237 PEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR 295
            E+  + K+ G     NP    D    + + E+T G GAD   E  G           S 
Sbjct: 238 EERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSI 297

Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSV 326
              GK V +G      P+ L  +++ + + V
Sbjct: 298 AINGKIVYIGRAATTVPLHLEVLQVRRAQIV 328

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 96.2 bits (240), Expect = 2e-22
 Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 46/323 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA     PG PL + E +V  P   E+ IK+    +CHSD    + +  +P L  P + G
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGA--MPGLSYPRVPG 59

Query: 77  HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           HE VG +++VGE V   K  D V +      CG C  C+      C     G    + RD
Sbjct: 60  HEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCE---NGKVTGVTRD 116

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGIACLLSCGVSTGVGAA 194
           G                    + EY +     + +I   +     A LL  GV+T    A
Sbjct: 117 G-------------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTT--FNA 155

Query: 195 WKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
            + +G + G  VA+ G+G +G LAV   A++    + + +    +K ++ +K G   +I+
Sbjct: 156 LRNSGAKPGDLVAVQGIGGLGHLAVQYAAKM--GFRTVAISRGSDKADLARKLGAHHYID 213

Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW---GKTVILGVEMHG 310
            +    + V++ ++E+  GGA      I  T+    A ++   G    GK +ILG    G
Sbjct: 214 TSK---EDVAEALQEL--GGAK----LILATAPNAKAISALVGGLAPRGKLLILGAA--G 262

Query: 311 SPISLNSIE-ILKGRSVCGTYFG 332
            P++++ ++ I+  +S+ G   G
Sbjct: 263 EPVAVSPLQLIMGRKSIHGWPSG 285

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 95.8 bits (239), Expect = 3e-22
 Identities = 81/275 (29%), Positives = 120/275 (43%), Gaps = 40/275 (14%)

Query: 45  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
           +K+   ++C SD+  ++            + GHE VG V  VG  V  +K  D V+  F 
Sbjct: 30  VKVTAAAICGSDLHIYRGH---IPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFT 86

Query: 105 RDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161
             CGEC  C+  +S  C+K   FG    PN+  DG                   +  EY 
Sbjct: 87  IACGECFYCRRGQSGRCAKGGLFGYAGSPNL--DG-------------------AQAEYV 125

Query: 162 VV---DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
            V   D T ++K+   +    A LL   + TG   A K A V  G TVA+ G G VGL  
Sbjct: 126 RVPFADGT-LLKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLCA 183

Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
              A++  A+++  VD  PE+ E     G  + IN     D    + ++E T+G GAD  
Sbjct: 184 VLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFE---DAEPVERVREATEGRGADVV 239

Query: 278 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
            E +G  + ++ AF+  R   G    +GV  H + 
Sbjct: 240 LEAVGGAAALDLAFDLVRP-GGVISSVGV--HTAE 271

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 95.8 bits (239), Expect = 3e-22
 Identities = 81/318 (25%), Positives = 127/318 (39%), Gaps = 40/318 (12%)

Query: 21  CRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHE 78
           C I     L +EE     P   E+R+++    +C SD+ ++        +L  P++ GHE
Sbjct: 1   CVIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHE 60

Query: 79  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGT- 137
             GVVE+VG  V  +     V     R CG C  C++ + N C         NM   G+ 
Sbjct: 61  VSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLC--------LNMRFLGSA 112

Query: 138 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAA 194
            RF  ++G           F EY VVD +  V +   + L  A L   L+  +      A
Sbjct: 113 MRFPHVQG----------GFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALH-----A 157

Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
              AG   G  V + G G +G  V   AR   A++I+  D+      + +  G  + +N 
Sbjct: 158 VNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNL 217

Query: 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 314
           A       +        G  D  FE  G  + +  A    R G G  V +G  M G P+ 
Sbjct: 218 ARDPLAAYAADK-----GDFDVVFEASGAPAALASALRVVRPG-GTVVQVG--MLGGPVP 269

Query: 315 LNSIEILKGRSVC--GTY 330
           L    ++  + +   G++
Sbjct: 270 LPLNALV-AKELDLRGSF 286

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 90.1 bits (224), Expect = 5e-22
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 6/135 (4%)

Query: 213 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG 272
            VGLA  + A+   A+++I VD + EK E+ K+ G    IN          + ++E+T G
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED---FVERVRELTGG 57

Query: 273 -GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331
            G D   +C+G  + +  A    R G    V+        P  L  + +LK  ++ G+  
Sbjct: 58  RGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDL-LLKELTILGSLG 116

Query: 332 GGLK-PRSDIATLAQ 345
           GG +     +  LA 
Sbjct: 117 GGREEFEEALELLAS 131

Length = 131

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 94.1 bits (235), Expect = 1e-21
 Identities = 66/236 (27%), Positives = 91/236 (38%), Gaps = 30/236 (12%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
               L     E  P    ++ IKI    +CHSD+   ++  +      P++ GHE VG+V
Sbjct: 8   ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRN--EWGPTKYPLVPGHEIVGIV 65

Query: 84  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 142
            +VG  V + K  D V +      CG C  CKS +   C K    Y      DGT     
Sbjct: 66  VAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN-GKYPDGT----- 119

Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 202
                    +    + ++ VVD   V KI   +    A  L C   T V +  K  GV  
Sbjct: 120 ---------ITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT-VYSPLKRNGVGP 169

Query: 203 GSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
           G  V + G+G     AV  A A GA       +     +P K E   K G  +FI 
Sbjct: 170 GKRVGVVGIGGLGHLAVKFAKALGAE------VTAFSRSPSKKEDALKLGADEFIA 219

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 86.1 bits (214), Expect = 8e-21
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 24/130 (18%)

Query: 42  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 101
           E+ +++    +C SD+  ++   + P + LP+I GHE  G+VE VG  V  +K  D V+ 
Sbjct: 3   EVLVRVKAAGICGSDLHIYRG--EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60

Query: 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161
                CG+C  C+  + N C     G    +  DG                    F EY 
Sbjct: 61  YPLIPCGKCAACREGRENLC---PNGKFLGVHLDGG-------------------FAEYV 98

Query: 162 VVDITHVVKI 171
           VV   ++V +
Sbjct: 99  VVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 90.9 bits (226), Expect = 2e-20
 Identities = 86/297 (28%), Positives = 131/297 (44%), Gaps = 45/297 (15%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+        V+ E  + P K  E  +K+    +CH+D+    ++ D        I G
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHV--ANGDFGDKT-GRILG 58

Query: 77  HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPR 134
           HE +G+V+ VG  V  +K  D V +  F   CG C  C + +   C      GY      
Sbjct: 59  HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTV---- 114

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGA 193
           DG                      E  +V   + VK+   +    A  ++C GV+T    
Sbjct: 115 DG-------------------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTY--K 153

Query: 194 AWKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
           A KV+G++ G  +AI+G G +G LA+     +  A K+I VDIN +K  + K+ G    I
Sbjct: 154 AIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTI 212

Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS----REGWGKTVILG 305
           N     D  V+++I+E T GGA        +T+V   AFN +    R G G+ V +G
Sbjct: 213 NSKRVED--VAKIIQEKT-GGAHAAV----VTAVAKAAFNQAVDAVRAG-GRVVAVG 261

Length = 338

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 88.5 bits (220), Expect = 1e-19
 Identities = 75/298 (25%), Positives = 119/298 (39%), Gaps = 43/298 (14%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           KA + R  G P  L   ++    P   E+ +++   +L H D+ + +      KLPLP I
Sbjct: 2   KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDL-WVRRGMPGIKLPLPHI 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMP 133
            G +  GVVE+VG  V  VK    V+      CG C  C + + N C+++G  G      
Sbjct: 61  LGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH---- 116

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
            DG                    + EY  V   +++ I  ++    A        T    
Sbjct: 117 VDGG-------------------YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT---- 153

Query: 194 AWKV----AGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
           AW +    A +  G TV + G G+ VG A  + A+L  A  +I    + +K E  K+ G 
Sbjct: 154 AWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGA 212

Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
              I+      +   + ++E+T   G D   E +G       +  S   G G+ V  G
Sbjct: 213 DYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG-GRLVTCG 265

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 81/293 (27%), Positives = 120/293 (40%), Gaps = 43/293 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-------TFWKSSTDLPKL 69
           +A +C  P     +EE+ V  P   EI +K+    +C  D+       +FW      P +
Sbjct: 2   RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60

Query: 70  PLPVIFGHEAVGVVESVGEYVEE--VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-R 126
             P+I GHE VG V  +GE  EE  VK  D V+      C  CR C   +   C K    
Sbjct: 61  KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120

Query: 127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---L 183
           G++ N+   G + +     + I H                   K+   IP   A L   L
Sbjct: 121 GFQNNVN-GGMAEYMRFPKEAIVH-------------------KVPDDIPPEDAILIEPL 160

Query: 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243
           +C +      A   A ++    V + G G +GL +   ARL    K+I +D+  E+  + 
Sbjct: 161 ACALH-----AVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA 215

Query: 244 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR 295
           +KFG    +NP    +  V + IKE+T G G D   E  G  S +    N  R
Sbjct: 216 RKFGADVVLNPP---EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIR 265

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 86.6 bits (215), Expect = 4e-19
 Identities = 79/334 (23%), Positives = 124/334 (37%), Gaps = 58/334 (17%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           KA +    G P  L + E+    P   E+ +++    +   DV   +     P  PLP I
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFI 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G EA GVV +VG  V   K  D V                                + R
Sbjct: 61  PGSEAAGVVVAVGSGVTGFKVGDRVA---------------------------ALGGVGR 93

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
           DG                    + EY VV    +V +   +    A  L     T   A 
Sbjct: 94  DG-------------------GYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLAL 134

Query: 195 WKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
           +  AG++ G TV + G  G VG A  + A+   A+ +  V  + EK E+ K+ G    IN
Sbjct: 135 FDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS-SSEKLELLKELGADHVIN 193

Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
                ++   + ++E+T G G D   + +G       +  +   G G+ V +G    G P
Sbjct: 194 YR---EEDFVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPP 248

Query: 313 ISLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQ 345
           + LN +  + K  ++ G   G   P +    LA+
Sbjct: 249 VPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAE 282

Length = 326

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 66/313 (21%), Positives = 110/313 (35%), Gaps = 58/313 (18%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK---------SSTDLP 67
           +AA+ R    PLV+ ++    P   ++ +K+L   +C SD+                 L 
Sbjct: 2   RAAVFR--DGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLM 59

Query: 68  KLPLPVIFGHEAVGVVESVGEYVEE---VKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124
            L   ++ GHE  G V   G   E    V  R   LP+    CG+   C           
Sbjct: 60  DLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL--CGQGASC----------- 106

Query: 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL-- 182
           G G  P  P                       + EY ++    ++++   + +  A L  
Sbjct: 107 GIGLSPEAP---------------------GGYAEYMLLSEALLLRVPDGLSMEDAALTE 145

Query: 183 -LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
            L+ G+      A + A +  G    + G G +GLAV    +      I+  D +PE+  
Sbjct: 146 PLAVGLH-----AVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRA 200

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGA-DYCFECIGLTSVMNDAFNSSREGWGK 300
           +    G    ++PA                G      FEC+G   ++      +  G G+
Sbjct: 201 LALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GR 259

Query: 301 TVILGVEMHGSPI 313
            V++GV M    I
Sbjct: 260 IVVVGVCMESDNI 272

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 82.8 bits (205), Expect = 8e-18
 Identities = 56/287 (19%), Positives = 102/287 (35%), Gaps = 64/287 (22%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGV 82
           PG+   +EE     P   ++ +++    +C SD+  +            P   GHE  G 
Sbjct: 4   PGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGR 62

Query: 83  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 142
           V ++G  V  +   D V                                           
Sbjct: 63  VVALGPGVRGLAVGDRVA------------------------------------------ 80

Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP--LGIACLLSCGVSTGVGAAWKVAGV 200
                    L+  +F EY + D  H V +   +         L C ++      ++   +
Sbjct: 81  --------GLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN-----VFRRGWI 127

Query: 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260
             G TVA+ G G +GL   + A    A ++I +D  P +  + ++ G T+ +   +   +
Sbjct: 128 RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E 184

Query: 261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
            + + ++E+T G GAD   E +G    ++ A     E  G+ VI G 
Sbjct: 185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGY 230

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 79.6 bits (197), Expect = 7e-17
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 12/147 (8%)

Query: 159 EYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
           E  VV    +V +   +P   A L +   +T +      A   +G  VA+ GLG VGL  
Sbjct: 56  ERVVVPANLLVPLPDGLPPERAALTALA-ATALNGVRD-AEPRLGERVAVVGLGLVGLLA 113

Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278
           A+ A+   A +++GVD +  + E+ +  G  D +   T           E+   GAD   
Sbjct: 114 AQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADT---------ADEIGGRGADVVI 164

Query: 279 ECIGLTSVMNDAFNSSREGWGKTVILG 305
           E  G  S +  A    R+  G+ V++G
Sbjct: 165 EASGSPSALETALRLLRDR-GRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 77.6 bits (191), Expect = 6e-16
 Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 28/292 (9%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
           PGKP+V   +E+    A ++ +K+    +CH+D++++           P+  GHE  G V
Sbjct: 7   PGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHAL-PLALGHEISGRV 65

Query: 84  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 143
              G        + +++P     CGEC  CK+ +   C          MP +      ++
Sbjct: 66  IQAGAGAASWIGKAVIVPAV-IPCGECELCKTGRGTICRA------QKMPGN------DM 112

Query: 144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 203
           +G    H +  +      VVD   +      +PL    +++  V+T   AA + AG++ G
Sbjct: 113 QGGFASHIVVPAKG--LCVVDEARLAA--AGLPLEHVSVVADAVTTPYQAAVQ-AGLKKG 167

Query: 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 263
             V + G G VG  + + A+   A+ ++ +DI+PEK E+ K FG    +NP     + V 
Sbjct: 168 DLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVK 226

Query: 264 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
           ++IK              GL S     F  S    G+   L +  HG  + +
Sbjct: 227 KLIKAFAKAR--------GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVV 270

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 72.3 bits (178), Expect = 5e-14
 Identities = 80/333 (24%), Positives = 123/333 (36%), Gaps = 76/333 (22%)

Query: 19  AICRIPGKP-LVIEEIEVEPPKAWEIRIKILCTSLCHSDV--------TFWKSSTDLPKL 69
           AI   PGKP + + +I    P   E+ ++ L   +C +D         T       L   
Sbjct: 3   AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFL--- 59

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
               + GHEA+GVVE VG+    +   DLV+P   R  G+C +C            R  R
Sbjct: 60  ----VLGHEALGVVEEVGD-GSGLSPGDLVVPTVRRPPGKCLNC------------RIGR 102

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCG 186
           P+    G    R +KG  +H F+      EY V D  ++VK+ P +   +  L   LS  
Sbjct: 103 PDFCETGEYTERGIKG--LHGFM-----REYFVDDPEYLVKVPPSL-ADVGVLLEPLSV- 153

Query: 187 VSTGVGAAWKVAGVEVGS--------TVAIFGLGAVGL-----AVAEGAR---LNRASKI 230
               V  A + A   V             + G G +GL         G     LNR    
Sbjct: 154 ----VEKAIEQA-EAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR---- 204

Query: 231 IGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDA 290
              D    K +I ++ G T ++N +      V         G  D   E  G+  +  +A
Sbjct: 205 --RDPPDPKADIVEELGAT-YVNSSKTPVAEVK------LVGEFDLIIEATGVPPLAFEA 255

Query: 291 FNSSREGWGKTVILGVEMHGSPISLNSIEILKG 323
             +     G  ++ GV   G    ++  E+ + 
Sbjct: 256 LPALAPN-GVVILFGVPGGGREFEVDGGELNRD 287

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 71.8 bits (176), Expect = 8e-14
 Identities = 72/255 (28%), Positives = 105/255 (41%), Gaps = 46/255 (18%)

Query: 45  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
           +K++ T++C SD    +  T  P     ++ GHE  G V   G  VE +K  D+V   F+
Sbjct: 38  LKVVTTNICGSDQHMVRGRTTAPT---GLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN 94

Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGD----------VIHHFLNI 154
             CG CR+CK   +  C         N  R G +      G           V +   N+
Sbjct: 95  IACGRCRNCKEGHTGVCLNV------NPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNL 148

Query: 155 SSFTEY-----SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209
             F +       + D+T +  I P               TG   A   AGV  GSTV I 
Sbjct: 149 LKFPDRDQALEKIRDLTMLSDIFP---------------TGYHGAV-TAGVGPGSTVYIA 192

Query: 210 GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIK 267
           G G VGLA A  A+L  A+ +I  D+NP +    + FG    D    AT  ++ + Q++ 
Sbjct: 193 GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQ-IEQILG 251

Query: 268 EMTDGGADYCFECIG 282
           E      D   +C+G
Sbjct: 252 EPE---VDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 71.4 bits (175), Expect = 9e-14
 Identities = 59/253 (23%), Positives = 97/253 (38%), Gaps = 40/253 (15%)

Query: 19  AICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGH 77
            +   P  P +  + +V         +K+  + LC SD+   +K+         P+  GH
Sbjct: 13  RVAESP-IPEIKHQDDV--------LVKVASSGLCGSDIPRIFKNGAHY----YPITLGH 59

Query: 78  EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDG 136
           E  G VE+VG  V+++   D V  +    C  C +C     + C+K+   G R    RDG
Sbjct: 60  EFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSR----RDG 115

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
                                 EY VV   ++  +   +P+     +   ++ G+ A   
Sbjct: 116 -------------------GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL 155

Query: 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256
             G E G  V I G G +GL   + A    A  +  +DIN EK  + K  G     N   
Sbjct: 156 AQGCE-GKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214

Query: 257 CGDKTVSQVIKEM 269
                +  V++E+
Sbjct: 215 MSAPQIQSVLREL 227

Length = 347

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 70.2 bits (172), Expect = 1e-13
 Identities = 61/253 (24%), Positives = 96/253 (37%), Gaps = 34/253 (13%)

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLV-LPIFHR-------DCGECRDCKSSKSNTC-SKF 124
           + GHE VG V ++          D V L +  R        CG C  C+      C S  
Sbjct: 1   VLGHEIVGEVVALRG--GFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR 58

Query: 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
             G+   +          L G    H    +          T +V +   +P  +A    
Sbjct: 59  KYGHEA-LDSGW-----PLSGGYAEHCHLPAG---------TAIVPVPDDLPDAVAAPAG 103

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
           C  +T V AA + AG   G  V + G G +GL  A  A    A++++  D +P++ E+  
Sbjct: 104 CATAT-VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELAL 162

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
            FG T    P       +++    + +G G D   E  G T+ +     S   G G  V+
Sbjct: 163 SFGATALAEPE-----VLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVL 216

Query: 304 LGVEMHGSPISLN 316
            G    G P++L+
Sbjct: 217 AGSVFPGGPVALD 229

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 71.0 bits (174), Expect = 1e-13
 Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 41/291 (14%)

Query: 26  KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK----SSTDLPKLPLPVIFGHEAVG 81
             L I+  ++ P    ++R+++    +C SDV + K    +   + +   P++ GHE  G
Sbjct: 27  NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKE---PMVIGHECAG 83

Query: 82  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 141
           ++E VG  V+ +   D V       C  C  CK  + N C        P M    T    
Sbjct: 84  IIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC--------PEMKFFATPPVH 135

Query: 142 -ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACL-LSCGVSTGVGAAWKV 197
             L   V+H              D+    K+  ++ L  G  C  LS GV      A + 
Sbjct: 136 GSLANQVVHP------------ADL--CFKLPENVSLEEGAMCEPLSVGVH-----ACRR 176

Query: 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 257
           A +   + V + G G +GL     AR   A +I+ VD++ E+  + K+ G  + +  +T 
Sbjct: 177 ANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTN 236

Query: 258 GDKTVSQV--IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
            +   S+V  I++   GG D  F+C+G    M+ A  ++R G GK  ++G+
Sbjct: 237 IEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM 286

Length = 364

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 33/233 (14%)

Query: 28  LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
           L IEE  +  P A E+R+K+    +C SD   ++     P    P + GHE  GV+++VG
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHN--PFAKYPRVIGHEFFGVIDAVG 69

Query: 88  EYVEE--VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 145
           E V+   + ER  V P+    CG C  C   K N C+         + RDG         
Sbjct: 70  EGVDAARIGERVAVDPVI--SCGHCYPCSIGKPNVCTSL---VVLGVHRDG--------- 115

Query: 146 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS-CGVSTGVGAAWKVAGVEVGS 204
                      F+EY+VV   +  +I   I    A ++    ++  V       G     
Sbjct: 116 ----------GFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGR---TGPTEQD 162

Query: 205 TVAIFGLGAVGLAVAEG-ARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256
              I+G G VGL + +    +     +I  D   E+  + K+ G    IN A 
Sbjct: 163 VALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215

Length = 339

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 68.8 bits (169), Expect = 6e-13
 Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 20/128 (15%)

Query: 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPA 255
           AGV+ G TVA+FG G VGL  A  A L  AS++  VD  PE+ ++ +  G    DF +  
Sbjct: 172 AGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSD-- 229

Query: 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVIL 304
             GD    + I  +  GG D   +C+G  +           V+N     +R G G   I+
Sbjct: 230 --GDP--VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIV 284

Query: 305 GVEMHGSP 312
           GV +   P
Sbjct: 285 GVYVAEDP 292

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 67.6 bits (166), Expect = 1e-12
 Identities = 57/274 (20%), Positives = 90/274 (32%), Gaps = 66/274 (24%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSST-DLPKLPLPV 73
           KA      G P V+E  +V  P+    E+ +K+    +   D+   +        L LP+
Sbjct: 2   KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           I GH+  GVV +VG  V   K  D V                        FG        
Sbjct: 62  IPGHDVAGVVVAVGPGVTGFKVGDEV------------------------FG---MTPFT 94

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
           R G                    + EY VV    +     ++    A      +      
Sbjct: 95  RGGA-------------------YAEYVVVPADELALKPANLSFEEA----AALPLAGLT 131

Query: 194 AW----KVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
           AW    ++ G++ G TV I G  G VG    + A+  R +++I    +    +  +  G 
Sbjct: 132 AWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAK-ARGARVIAT-ASAANADFLRSLGA 189

Query: 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282
            + I      D T     +    GG D   + +G
Sbjct: 190 DEVI------DYTKGDFERAAAPGGVDAVLDTVG 217

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 78/344 (22%), Positives = 114/344 (33%), Gaps = 76/344 (22%)

Query: 25  GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 84
           G  LV+ ++ V  P   E+ +K+   +L   D   WK          P I G +  G V 
Sbjct: 11  GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAILGCDFAGTVV 67

Query: 85  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 144
            VG  V   K  D V        G               F  G  PN PR+G        
Sbjct: 68  EVGSGVTRFKVGDRV-------AG---------------FVHGGNPNDPRNG-------- 97

Query: 145 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST---------GVGAAW 195
                      +F EY V D     KI  +I    A  L  G+ T         G+    
Sbjct: 98  -----------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPP 146

Query: 196 -KVAGVEVGSTVAIFGLG--AVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
            K +    G  V I+G G  +VG     LA   G +      +I    +P+ F++ K  G
Sbjct: 147 PKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGYK------VITT-ASPKNFDLVKSLG 198

Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
                +     D  V + I+  T G   Y  +CI           +     G  +   V 
Sbjct: 199 ADAVFDYH---DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKL---VS 252

Query: 308 MHGSPISLNSIEILKGRSV-CGTYFGGLKPRSDIATLAQKYLDK 350
           +   P      + +K + V   T FG +    +   +  KYL +
Sbjct: 253 LLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPE 296

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 63.7 bits (156), Expect = 3e-11
 Identities = 80/323 (24%), Positives = 123/323 (38%), Gaps = 62/323 (19%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           KA +C+  G P  LV+EE+  EP    E+RI++    +   D+   +    + K PLP +
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFV 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G E  GVVE+VGE V   K                                        
Sbjct: 61  PGSEVAGVVEAVGEGVTGFKV--------------------------------------- 81

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
                     GD +        F E  VV    V  +   +    A  L     T   A 
Sbjct: 82  ----------GDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHAL 131

Query: 195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
            + A ++ G TV + G  G VGLA  + A+   A ++I    + EK  + +  G    I+
Sbjct: 132 VRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190

Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
                D  + + +K +T G G D  ++ +G   V   +  S   G G+ +++G      P
Sbjct: 191 ---YRDPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP 245

Query: 313 -ISLNSIEILKGRSVCGTYFGGL 334
            I  N + +LK  SV G Y+G  
Sbjct: 246 QIPANLL-LLKNISVVGVYWGAY 267

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 63.0 bits (154), Expect = 6e-11
 Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 18/118 (15%)

Query: 25  GKPLVIEEIEVEPPKAWEIR------IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHE 78
           G P  +   +V  PK   I       ++I  T++C SD+  ++  T        ++ GHE
Sbjct: 7   GGPGNVAVEDVPDPK---IEHPTDAIVRITTTAICGSDLHMYRGRTGAEP---GLVLGHE 60

Query: 79  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           A+G VE VG  VE +K  D V+  F+  CG CR+CK   +  C         N  R G
Sbjct: 61  AMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCL------TVNPGRAG 112

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 80/310 (25%), Positives = 126/310 (40%), Gaps = 32/310 (10%)

Query: 42  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 100
           ++ +KIL   +CHSD+   K+     + P  +I GHE VG+   VG+ V + KE D V +
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYP--IIPGHEIVGIATKVGKNVTKFKEGDRVGV 90

Query: 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160
            +    C  C  C     N C K    Y  +   DGT               N   +++ 
Sbjct: 91  GVIIGSCQSCESCNQDLENYCPKVVFTYN-SRSSDGTR--------------NQGGYSDV 135

Query: 161 SVVDITHVVKITPHIPLGI-ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVG-LAV 218
            VVD   V+ I   +P    A LL  G++      +     E G  + + GLG +G +AV
Sbjct: 136 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAV 195

Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278
             G        +I      E+  I  + G   F+        T SQ +KE   G  D+  
Sbjct: 196 KIGKAFGLRVTVISRSSEKEREAI-DRLGADSFLV------TTDSQKMKEAV-GTMDFII 247

Query: 279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS-VCGTYFGGLKPR 337
           + +     +   F+  +   GK V LG  +   P+ L    ++ GR  V G+  GG+K  
Sbjct: 248 DTVSAEHALLPLFSLLKVS-GKLVALG--LPEKPLDLPIFPLVLGRKMVGGSQIGGMKET 304

Query: 338 SDIATLAQKY 347
            ++     K+
Sbjct: 305 QEMLEFCAKH 314

Length = 375

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 63/286 (22%), Positives = 107/286 (37%), Gaps = 56/286 (19%)

Query: 45  IKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 103
           ++I    +C SD+ +++        +  P++ GHE +G +        +  +   + P  
Sbjct: 32  VQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDSSGLKEGQTVAINP-- 89

Query: 104 HRDCGECRDCKSSKSNTCSK---FGRG-YRPNMPRDGTSRFRELKGDVIHHFLNISSFTE 159
            + CG C+ C S   N C+    FG   Y P++  DG                    FT 
Sbjct: 90  SKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHV--DG-------------------GFTR 128

Query: 160 YSVVDITHVVKITPHI---------PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 210
           Y VVD    +               PL +A          + AA   AG   G  V + G
Sbjct: 129 YKVVDTAQCIPYPEKADEKVMAFAEPLAVA----------IHAA-HQAGDLQGKRVFVSG 177

Query: 211 LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270
           +G +G  +    +   A++I+  D++P    + ++ G    +NP    +  +     E  
Sbjct: 178 VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNP---QNDDLDHYKAE-- 232

Query: 271 DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 316
            G  D  FE  G  S +N     +R    K V++ V M G+P    
Sbjct: 233 KGYFDVSFEVSGHPSSINTCLEVTR---AKGVMVQVGMGGAPPEFP 275

Length = 343

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 60.7 bits (147), Expect = 3e-10
 Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 42  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 100
           ++ +KIL   +CHSD+   K+     + P+  + GHE VG+V  +G+ V++ KE D V +
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPI--VPGHEIVGIVTKLGKNVKKFKEGDRVGV 96

Query: 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160
            +    C  C  C     N C K    Y  ++  DGT               N   +++ 
Sbjct: 97  GVIVGSCKSCESCDQDLENYCPKMIFTYN-SIGHDGTK--------------NYGGYSDM 141

Query: 161 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGAVG-LAV 218
            VVD   V++   ++PL     L C   T V +  K  G+ E G  + + GLG +G +AV
Sbjct: 142 IVVDQHFVLRFPDNLPLDAGAPLLCAGIT-VYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200

Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
             G        +I    N E   I  + G   F+
Sbjct: 201 KIGKAFGLKVTVISSSSNKEDEAI-NRLGADSFL 233

Length = 360

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 40/206 (19%)

Query: 28  LVIEEIEVEPPKAWEIRIKILCTSLCHSD---VTFWKSSTDLPKLPLPVIFGHEAVGVVE 84
           L +E+++   P   E+ I++    +   D   +   K        P+P I G E  GVVE
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVK------PMPHIPGAEFAGVVE 67

Query: 85  SVGEYVEEVKERDLVLPIFHRD-CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 143
            VG++V+ VK+ D V+ +++R   G C  C S     C     G    +  +G       
Sbjct: 68  EVGDHVKGVKKGDRVV-VYNRVFDGTCDMCLSGNEMLCRN---GGIIGVVSNG------- 116

Query: 144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 203
                        + EY VV   ++ KI   I   +A  L     T   A  K AG+  G
Sbjct: 117 ------------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-KTAGLGPG 163

Query: 204 STVAIF------GLGAVGLAVAEGAR 223
            TV +F      G+ AV LA   GA 
Sbjct: 164 ETVVVFGASGNTGIFAVQLAKMMGAE 189

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 57.1 bits (139), Expect = 4e-09
 Identities = 66/269 (24%), Positives = 93/269 (34%), Gaps = 82/269 (30%)

Query: 28  LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
           L  E++ V  P   E+ ++     +   D  F    + L  LPLP + G E  GVVE+VG
Sbjct: 14  LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF---RSGLYPLPLPFVLGVEGAGVVEAVG 70

Query: 88  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 147
             V   K  D V                         G                      
Sbjct: 71  PGVTGFKVGDRVA-------------------YAGPPG---------------------- 89

Query: 148 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTGVG-AAW----KVAGV 200
                   ++ EY VV  + +VK+   I    A   LL        G  A     +   V
Sbjct: 90  --------AYAEYRVVPASRLVKLPDGISDETAAALLLQ-------GLTAHYLLRETYPV 134

Query: 201 EVGSTVAIFGL-GAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
           + G TV +    G VGL     A A GA       +IG   + EK E+ +  G    IN 
Sbjct: 135 KPGDTVLVHAAAGGVGLLLTQWAKALGAT------VIGTVSSEEKAELARAAGADHVIN- 187

Query: 255 ATCGDKTVSQVIKEMTDG-GADYCFECIG 282
               D  V +V +E+T G G D  ++ +G
Sbjct: 188 YRDED-FVERV-REITGGRGVDVVYDGVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 54.8 bits (133), Expect = 2e-08
 Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 43/261 (16%)

Query: 28  LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
           L + E  V  P   E+ +++   SL + D+         P +  P+I   +  G V +VG
Sbjct: 15  LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNG-RYPPPVKDPLIPLSDGAGEVVAVG 73

Query: 88  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 147
           E V   K  D V+P F  +             T            P DG           
Sbjct: 74  EGVTRFKVGDRVVPTFFPNWL-------DGPPTAEDEASALGG--PIDGVLA-------- 116

Query: 148 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVA 207
                      EY V+    +V+   H+    A  L C   T   A + +  ++ G TV 
Sbjct: 117 -----------EYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVL 165

Query: 208 IFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 262
           + G G V L     A A GAR      +I    + EK E  K  G    IN  T  D   
Sbjct: 166 VQGTGGVSLFALQFAKAAGAR------VIATSSSDEKLERAKALGADHVINYRTTPD--W 217

Query: 263 SQVIKEMTDG-GADYCFECIG 282
            + + ++T G G D+  E  G
Sbjct: 218 GEEVLKLTGGRGVDHVVEVGG 238

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 72/278 (25%), Positives = 98/278 (35%), Gaps = 71/278 (25%)

Query: 16  CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSD--VTFWKSSTDLPKLPL 71
            KA +   PG    L +EEIE+  P A E+ +K+    L   D  V  W           
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW----SY 56

Query: 72  PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
           P + G +  GVV +VG  V   K  D V                            Y  +
Sbjct: 57  PHVPGVDGAGVVVAVGAKVTGWKVGDRVA---------------------------YHAS 89

Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
           + R G                   SF EY+VVD   V+ +   +    A  L C   T  
Sbjct: 90  LARGG-------------------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAY 130

Query: 192 GAAWKVAGVEVGSTVAIFGL-GAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKK 245
            A +K   +E G T+ I G  G VG     LA   G R       +    +   FE  K 
Sbjct: 131 QALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-------VITTCSKRNFEYVKS 183

Query: 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
            G    I+     D+ V + IKE+T G G D   + +G
Sbjct: 184 LGADHVID---YNDEDVCERIKEITGGRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 38/180 (21%)

Query: 42  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 100
           ++ IK++   +CH+D+   K+  DL     P++ GHE VG V  VG  V +    D+V +
Sbjct: 36  DVVIKVIYCGICHTDLHQIKN--DLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGV 93

Query: 101 PIFHRDCGECRDCKSSKSNTCSK----FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS 156
            +    CGEC  CKS     C+K    +   Y    P  G                    
Sbjct: 94  GVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQG-------------------G 134

Query: 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGL 216
           F    VVD   VVKI   +    A  L C            AGV V S ++ FGL   GL
Sbjct: 135 FASAMVVDQKFVVKIPEGMAPEQAAPLLC------------AGVTVYSPLSHFGLKQSGL 182

Length = 357

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 53.1 bits (128), Expect = 9e-08
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 17/89 (19%)

Query: 24  PGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLP-------KLPLPVI 74
              PLV+E + +  P     E+ +++L   +  SD+        +        + PLP +
Sbjct: 8   EPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDL--------ITISGAYGSRPPLPAV 59

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIF 103
            G+E VGVV  VG  V  +     VLP+ 
Sbjct: 60  PGNEGVGVVVEVGSGVSGLLVGQRVLPLG 88

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 73/314 (23%), Positives = 112/314 (35%), Gaps = 75/314 (23%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA +        V +  + EPP      +++L   +C++D+  +K        P P + G
Sbjct: 2   KALVLDGGLDLRVEDLPKPEPPPGE-ALVRVLLAGICNTDLEIYKGYY-----PFPGVPG 55

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPI-FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           HE VG+VE   E   E+  + +V  I     CG C  C+      C        PN    
Sbjct: 56  HEFVGIVEEGPE--AELVGKRVVGEINIA--CGRCEYCRRGLYTHC--------PN---- 99

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSV--VDITHVVKITPHI----------PLGIACLL 183
                R + G V        +F EY    ++  HVV   P +          PL  A   
Sbjct: 100 -----RTVLGIVDRD----GAFAEYLTLPLENLHVV---PDLVPDEQAVFAEPLAAAL-- 145

Query: 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243
                       +   +  G  VA+ G G +GL +A+   L     ++ V  + EK  + 
Sbjct: 146 ---------EILEQVPITPGDKVAVLGDGKLGLLIAQVLALT-GPDVVLVGRHSEKLALA 195

Query: 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTV 302
           ++ G+            TV     E   GG D   E  G  S +  A    R  G   TV
Sbjct: 196 RRLGVE-----------TVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPRG---TV 241

Query: 303 ILGVEMHGSPISLN 316
           +L    +  P S +
Sbjct: 242 VLK-STYAGPASFD 254

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 72/328 (21%), Positives = 113/328 (34%), Gaps = 63/328 (19%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           +A   +  G    L I E     PK  ++ IK+    +  +D    +     P     ++
Sbjct: 3   RAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEIL 62

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G E  G VE VG  V+  KE D V+ +                      G GY      
Sbjct: 63  -GLEVAGYVEDVGSDVKRFKEGDRVMALLP--------------------GGGY------ 95

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
                                   EY+V    HV+ I        A  +     T     
Sbjct: 96  -----------------------AEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLL 132

Query: 195 WKVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
            K   V+ G +V I  G   VG A A+ A    A+ II    + EK +  KK      I 
Sbjct: 133 KKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIR 191

Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
                     +V K   + G +   +C+G + +   A   + +  GK ++ G  M G+ +
Sbjct: 192 YPDEEGFA-PKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVD--GKWIVYGF-MGGAKV 247

Query: 314 S-LNSIEILKGR-SVCGTYFGGLKPRSD 339
              N + +L+ R S+  +    L+ RSD
Sbjct: 248 EKFNLLPLLRKRASIIFST---LRSRSD 272

Length = 334

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 50.0 bits (120), Expect = 8e-07
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 17 KAAICRIPGKPL-VIEEIEVEP--PKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLP 72
          +AA+    G P  V+E  EV    P A E+ ++   + + + D+  W    T   K  LP
Sbjct: 2  RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELP 59

Query: 73 VIFGHEAVGVVESVGEYVEEVK 94
           I G EAVGVV++VGE V+ ++
Sbjct: 60 AIGGSEAVGVVDAVGEGVKGLQ 81

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 65/273 (23%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           +A      G P  L + ++ V  P   E+ +++  + +   D T+ ++       PLP +
Sbjct: 2   RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVD-TYIRAGAYPGLPPLPYV 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G +  GVVE+VGE V+ +K  D V                      +  G G R     
Sbjct: 61  PGSDGAGVVEAVGEGVDGLKVGDRVW--------------------LTNLGWGRRQ---- 96

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA- 193
            GT                     EY VV    +V +   +          G + G+ A 
Sbjct: 97  -GT-------------------AAEYVVVPADQLVPLPDGVS------FEQGAALGIPAL 130

Query: 194 -AWKV----AGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
            A++     AG + G TV + G  GAVG A  + AR   A ++I    + E  E+ ++ G
Sbjct: 131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAG 189

Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFE 279
                N      + ++  I   T G G D   E
Sbjct: 190 ADAVFNYR---AEDLADRILAATAGQGVDVIIE 219

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           +A      G P  L IEE+ V  P A E+ I++    L  +D   ++    +   PLP  
Sbjct: 2   RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADA-MFRRGAYIEPPPLPAR 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVL 100
            G+EA GVVE+VG  V      D V 
Sbjct: 61  LGYEAAGVVEAVGAGVTGFAVGDRVS 86

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 47.4 bits (113), Expect = 7e-06
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 22 RIPGK-PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-----LPVIF 75
          R+ GK  L +E+ E+      EI ++++  SLC S        +D  K+P      PVI 
Sbjct: 7  RMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVIL 66

Query: 76 GHEAVGVVESVGE 88
          GHE  G +  VG+
Sbjct: 67 GHEFAGTILKVGK 79

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 57/290 (19%), Positives = 100/290 (34%), Gaps = 62/290 (21%)

Query: 24  PGKPLVIEEIEVEPPKAW---EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAV 80
              PL I  I++  P  +   EI +K+   +L   D+  + S T   K+      G +  
Sbjct: 9   NTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVK-EKGLGRDYS 67

Query: 81  GVVESVGEYVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSR 139
           GV+  VG  V  E K  D V  I+                                    
Sbjct: 68  GVIVKVGSNVASEWKVGDEVCGIYP----------------------------------- 92

Query: 140 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV-- 197
                    H +    + ++Y +VD     K     P  I+   +      +G A+++  
Sbjct: 93  ---------HPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILE 143

Query: 198 -AGVEVG--STVAIFGLG-AVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI 252
             G ++G  S V + G   +VG    + A+ +     ++G   +    E+ KK G   FI
Sbjct: 144 DLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFI 202

Query: 253 NPATC-GDKTVSQVIKEMTDGGA-DYCFECIG---LTSVMNDAFNSSREG 297
           +     G K +  V++ +   G  D   +C+G   L   +N       + 
Sbjct: 203 DYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN 252

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 3/96 (3%)

Query: 27  PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86
           PL   E  V  P   E+ +++    +C +D+    S  DLP     V  GHE VG V   
Sbjct: 14  PLRFVERPVPRPGPGELLVRVRACGVCRTDLHV--SEGDLPVHRPRVTPGHEVVGEVAGR 71

Query: 87  GEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTC 121
           G         D V +    R CG CR C+    N C
Sbjct: 72  GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLC 107

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 43.7 bits (104), Expect = 8e-05
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 81
           +  K L + E EV  P   E+ IK+    +  SD+ F K      K  LPV  G E  G
Sbjct: 12 PLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTK-ALPVPPGFEGSG 70

Query: 82 VVESVGE 88
           V + G 
Sbjct: 71 TVVAAGG 77

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.4 bits (103), Expect = 9e-05
 Identities = 60/277 (21%), Positives = 87/277 (31%), Gaps = 79/277 (28%)

Query: 24  PGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAV 80
             + L++ E+EV  P     E+ +K+   S+   D    +    L    P P I G +  
Sbjct: 8   SPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFA 67

Query: 81  GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRF 140
           G V +VG  V   K  D V                        FGR         G    
Sbjct: 68  GEVVAVGSGVTRFKVGDEV------------------------FGRL---PPKGGGA--- 97

Query: 141 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI-----ACLLSCGVSTGVGAAW 195
                             EY V   + + K     P G+     A L   G+ T + A  
Sbjct: 98  ----------------LAEYVVAPESGLAK----KPEGVSFEEAAALPVAGL-TALQALR 136

Query: 196 KVAGVEVGSTVAIFGL-GAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
               V+ G  V I G  G VG     +A A GA       + GV  +    E+ +  G  
Sbjct: 137 DAGKVKPGQRVLINGASGGVGTFAVQIAKALGAH------VTGVC-STRNAELVRSLGAD 189

Query: 250 DFINPATCGDKTVSQVIKEMTDGGA-DYCFECIGLTS 285
           + I      D T    +     G   D  F+ +G + 
Sbjct: 190 EVI------DYTTEDFVALTAGGEKYDVIFDAVGNSP 220

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 57/270 (21%), Positives = 91/270 (33%), Gaps = 87/270 (32%)

Query: 28  LVIEEIEVEPPKAWEIRIKILCTSLCHSDVT----FWKSSTDLPKLPLPVIFGHEAVGVV 83
           L + E ++  P A E+ +K+  + +  +DV      +    D P  PLP   G++ VG V
Sbjct: 15  LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLY---PDQP--PLPFTPGYDLVGRV 69

Query: 84  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 143
           +++G  V   +  D V  +                                 G + +   
Sbjct: 70  DALGSGVTGFEVGDRVAAL-----------------------------TRVGGNAEYI-- 98

Query: 144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW----KVAG 199
                              +D  ++V +   +    A    C V   V  A+    + A 
Sbjct: 99  ------------------NLDAKYLVPVPEGVDAAEA---VCLVLNYV-TAYQMLHRAAK 136

Query: 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-----EIGKKFGITDFIN 253
           V  G  V I G  G VG A+ E A L  A ++ G     E+      E+G          
Sbjct: 137 VLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTA--SERNHAALRELG---------- 183

Query: 254 PATCGDKTVSQVIKEM-TDGGADYCFECIG 282
            AT  D      +  M T GG D  F+ +G
Sbjct: 184 -ATPIDYRTKDWLPAMLTPGGVDVVFDGVG 212

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
          KA +    G P    + E+    P   ++ +++  + +   D    +        PLP I
Sbjct: 2  KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR-PPLPAI 60

Query: 75 FGHEAVGVVESVGEYVEEVKERDLV 99
           G +  GVVE+VGE V   +  D V
Sbjct: 61 LGCDVAGVVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)

Query: 16  CKAAICRIPGKP---LVIEEIEVEPPKAW-EIRIKILCTSLCHSDV-TFWKSSTDLPKL- 69
            KA +    G+P   L +E  E+ PP    E+ +K+L   +  +D+          P   
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 70  -PLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 101
              P + G+E VG V  VG  V+ +K  D V+P
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIP 93

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 185 CGVSTGVGAAWKVA----GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK- 239
            GV  G+ AA +       +E G TVA+ GLG VG  +AE   L   +K+I  DIN E  
Sbjct: 7   YGVFLGMKAAAEHLLGTDSLE-GKTVAVQGLGKVGYKLAEHL-LEEGAKLIVADINEEAV 64

Query: 240 FEIGKKFGIT 249
               + FG T
Sbjct: 65  ARAAELFGAT 74

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 68 KLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 99
          KLPLP+  G+ +VG V  VG  V   K  D V
Sbjct: 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRV 48

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 39.1 bits (92), Expect = 0.003
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
          KA +   PG P  L + EI +  PK   + I++    L  S++   +  +  P +  P +
Sbjct: 2  KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHS--PSVKFPRV 59

Query: 75 FGHEAVGVVES 85
           G EAVG VE 
Sbjct: 60 LGIEAVGEVEE 70

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	373
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.98
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.98
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.98
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.92
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.89
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.77
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.33
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.19
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	98.63
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.57
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.39
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.29
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.28
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.23
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.19
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.18
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.08
PLN02494	477	adenosylhomocysteinase	98.01
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.01
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.94
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.79
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.78
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.78
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.77
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.75
PRK08324	681	short chain dehydrogenase; Validated	97.6
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.49
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.42
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.38
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.38
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.38
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.36
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.28
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.21
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.17
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.16
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.15
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.04
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.03
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.01
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	96.99
TIGR00438	188	rrmJ cell division protein FtsJ.	96.96
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.95
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.84
PRK07326	237	short chain dehydrogenase; Provisional	96.78
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.74
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.73
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.73
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.72
PRK05993	277	short chain dehydrogenase; Provisional	96.72
PRK05693	274	short chain dehydrogenase; Provisional	96.71
PRK08177	225	short chain dehydrogenase; Provisional	96.7
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.7
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.67
PRK00811	283	spermidine synthase; Provisional	96.67
PLN02366	308	spermidine synthase	96.63
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.62
PRK12742	237	oxidoreductase; Provisional	96.61
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.61
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.61
PRK07806	248	short chain dehydrogenase; Provisional	96.6
PRK06182	273	short chain dehydrogenase; Validated	96.59
PRK08265	261	short chain dehydrogenase; Provisional	96.57
PRK14967	223	putative methyltransferase; Provisional	96.55
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.55
PRK06949	258	short chain dehydrogenase; Provisional	96.54
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.54
PRK12939	250	short chain dehydrogenase; Provisional	96.52
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.51
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.51
PRK07109	334	short chain dehydrogenase; Provisional	96.49
PRK07060	245	short chain dehydrogenase; Provisional	96.49
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.48
PRK04148	134	hypothetical protein; Provisional	96.48
PRK08017	256	oxidoreductase; Provisional	96.45
PLN03209	576	translocon at the inner envelope of chloroplast su	96.45
PRK11207	197	tellurite resistance protein TehB; Provisional	96.45
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.45
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.44
PRK12828	239	short chain dehydrogenase; Provisional	96.42
PRK00536	262	speE spermidine synthase; Provisional	96.41
PRK12829	264	short chain dehydrogenase; Provisional	96.4
PRK07402	196	precorrin-6B methylase; Provisional	96.4
PRK06057	255	short chain dehydrogenase; Provisional	96.4
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.39
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.39
PRK06139	330	short chain dehydrogenase; Provisional	96.37
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.31
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.26
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.26
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.25
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.25
PRK07825	273	short chain dehydrogenase; Provisional	96.24
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.24
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.22
PRK01581	374	speE spermidine synthase; Validated	96.21
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	96.21
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.19
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.19
PRK08267	260	short chain dehydrogenase; Provisional	96.19
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.17
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.16
PRK04457	262	spermidine synthase; Provisional	96.16
PRK07814	263	short chain dehydrogenase; Provisional	96.15
PRK05872	296	short chain dehydrogenase; Provisional	96.15
PRK08618	325	ornithine cyclodeaminase; Validated	96.15
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.15
PRK08628	258	short chain dehydrogenase; Provisional	96.14
PRK09186	256	flagellin modification protein A; Provisional	96.11
PRK05866	293	short chain dehydrogenase; Provisional	96.11
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.1
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.09
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.08
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.08
PRK05867	253	short chain dehydrogenase; Provisional	96.05
PRK07677	252	short chain dehydrogenase; Provisional	96.05
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.05
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	96.04
PRK06841	255	short chain dehydrogenase; Provisional	96.01
COG4122	219	Predicted O-methyltransferase [General function pr	96.0
PRK06180	277	short chain dehydrogenase; Provisional	95.99
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.97
PRK08317	241	hypothetical protein; Provisional	95.95
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.94
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.94
PRK08263	275	short chain dehydrogenase; Provisional	95.94
PRK06196	315	oxidoreductase; Provisional	95.93
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.92
PRK06484	520	short chain dehydrogenase; Validated	95.92
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.92
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.92
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.91
PLN02823	336	spermine synthase	95.91
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.89
PRK06128	300	oxidoreductase; Provisional	95.88
PRK08339	263	short chain dehydrogenase; Provisional	95.87
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.87
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.86
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.85
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.85
PRK06500	249	short chain dehydrogenase; Provisional	95.83
PRK07904	253	short chain dehydrogenase; Provisional	95.81
PRK06953	222	short chain dehydrogenase; Provisional	95.81
PRK07478	254	short chain dehydrogenase; Provisional	95.79
PRK07831	262	short chain dehydrogenase; Provisional	95.79
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.79
PRK07832	272	short chain dehydrogenase; Provisional	95.76
PRK07062	265	short chain dehydrogenase; Provisional	95.76
PRK07454	241	short chain dehydrogenase; Provisional	95.73
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.73
PRK04266	226	fibrillarin; Provisional	95.73
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.72
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.72
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.72
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.71
PRK05875	276	short chain dehydrogenase; Provisional	95.7
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.7
PRK07576	264	short chain dehydrogenase; Provisional	95.69
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.68
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.68
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.65
CHL00194	317	ycf39 Ycf39; Provisional	95.64
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.63
PLN02780	320	ketoreductase/ oxidoreductase	95.63
PRK09291	257	short chain dehydrogenase; Provisional	95.63
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.63
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.62
PRK05717	255	oxidoreductase; Validated	95.61
PRK09072	263	short chain dehydrogenase; Provisional	95.59
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.59
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.58
PRK07063	260	short chain dehydrogenase; Provisional	95.57
PRK07024	257	short chain dehydrogenase; Provisional	95.56
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.55
PRK07774	250	short chain dehydrogenase; Provisional	95.54
PRK07890	258	short chain dehydrogenase; Provisional	95.53
PRK08643	256	acetoin reductase; Validated	95.52
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.52
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.52
PLN02244	340	tocopherol O-methyltransferase	95.51
PRK08703	239	short chain dehydrogenase; Provisional	95.51
PRK07574	385	formate dehydrogenase; Provisional	95.5
PRK06484	520	short chain dehydrogenase; Validated	95.5
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.5
PRK06138	252	short chain dehydrogenase; Provisional	95.48
PLN02476	278	O-methyltransferase	95.48
PLN03139	386	formate dehydrogenase; Provisional	95.47
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.46
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.46
PRK06198	260	short chain dehydrogenase; Provisional	95.46
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.46
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.46
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.45
PRK06181	263	short chain dehydrogenase; Provisional	95.44
PRK06172	253	short chain dehydrogenase; Provisional	95.44
PRK06125	259	short chain dehydrogenase; Provisional	95.44
PLN03075	296	nicotianamine synthase; Provisional	95.42
PRK07985	294	oxidoreductase; Provisional	95.42
PRK06940	275	short chain dehydrogenase; Provisional	95.41
PRK05854	313	short chain dehydrogenase; Provisional	95.41
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.41
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.4
PF07021	193	MetW: Methionine biosynthesis protein MetW; InterP	95.4
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.4
PRK06197	306	short chain dehydrogenase; Provisional	95.39
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.39
PRK07035	252	short chain dehydrogenase; Provisional	95.38
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.38
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.37
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.37
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.36
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.36
PRK06482	276	short chain dehydrogenase; Provisional	95.36
PRK08589	272	short chain dehydrogenase; Validated	95.35
PRK06101	240	short chain dehydrogenase; Provisional	95.35
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.34
PRK07340	304	ornithine cyclodeaminase; Validated	95.34
PRK06483	236	dihydromonapterin reductase; Provisional	95.33
PRK08251	248	short chain dehydrogenase; Provisional	95.33
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.33
PRK06194	287	hypothetical protein; Provisional	95.33
PRK06914	280	short chain dehydrogenase; Provisional	95.32
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.31
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.31
PRK12937	245	short chain dehydrogenase; Provisional	95.3
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.29
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	95.26
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.23
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.23
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.23
PRK09242	257	tropinone reductase; Provisional	95.23
PLN02253	280	xanthoxin dehydrogenase	95.23
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.22
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.2
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.2
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.19
PRK07417	279	arogenate dehydrogenase; Reviewed	95.18
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.18
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.17
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.13
PRK05876	275	short chain dehydrogenase; Provisional	95.13
PRK07074	257	short chain dehydrogenase; Provisional	95.13
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.11
PRK12367	245	short chain dehydrogenase; Provisional	95.1
PLN00203	519	glutamyl-tRNA reductase	95.1
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.09
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.08
PRK07067	257	sorbitol dehydrogenase; Provisional	95.06
PRK08862	227	short chain dehydrogenase; Provisional	95.05
PRK08226	263	short chain dehydrogenase; Provisional	95.05
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.03
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	95.02
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.01
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.99
PRK06720	169	hypothetical protein; Provisional	94.99
PRK06179	270	short chain dehydrogenase; Provisional	94.99
PRK06114	254	short chain dehydrogenase; Provisional	94.98
PRK08328	231	hypothetical protein; Provisional	94.98
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.98
PRK06701	290	short chain dehydrogenase; Provisional	94.97
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	94.97
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.96
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.96
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.96
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	94.94
PRK06398	258	aldose dehydrogenase; Validated	94.94
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.93
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.92
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	94.92
PRK07856	252	short chain dehydrogenase; Provisional	94.92
PRK08264	238	short chain dehydrogenase; Validated	94.89
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	94.84
PRK05884	223	short chain dehydrogenase; Provisional	94.84
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	94.84
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.82
PRK12747	252	short chain dehydrogenase; Provisional	94.82
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.81
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.8
PRK10538	248	malonic semialdehyde reductase; Provisional	94.8
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	94.78
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.78
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	94.77
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.67
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.67
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.67
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.63
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.63
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.62
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.61
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.61
PRK06141	314	ornithine cyclodeaminase; Validated	94.59
PRK07577	234	short chain dehydrogenase; Provisional	94.59
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.57
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	94.57
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.57
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.54
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.54
PRK07102	243	short chain dehydrogenase; Provisional	94.53
TIGR00452	314	methyltransferase, putative. Known examples to dat	94.51
PRK13243	333	glyoxylate reductase; Reviewed	94.47
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.4
PRK07775	274	short chain dehydrogenase; Provisional	94.4
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.36
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.34
PRK12335	287	tellurite resistance protein TehB; Provisional	94.33
PRK08303	305	short chain dehydrogenase; Provisional	94.32
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.32
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.3
PLN02928	347	oxidoreductase family protein	94.29
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.27
PLN02490	340	MPBQ/MSBQ methyltransferase	94.27
PLN02256	304	arogenate dehydrogenase	94.27
KOG0725	270	consensus Reductases with broad range of substrate	94.26
PRK14903	431	16S rRNA methyltransferase B; Provisional	94.24
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.24
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.24
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.23
PRK14968	188	putative methyltransferase; Provisional	94.22
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.2
PRK06523	260	short chain dehydrogenase; Provisional	94.19
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.19
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.16
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.15
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.14
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.12
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.1
COG0569	225	TrkA K+ transport systems, NAD-binding component [	94.1
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.08
PRK14904	445	16S rRNA methyltransferase B; Provisional	94.07
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.07
PF05724	218	TPMT: Thiopurine S-methyltransferase (TPMT); Inter	94.07
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	94.06
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.05
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.05
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.05
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	94.04
PLN02336	475	phosphoethanolamine N-methyltransferase	94.02
PRK05650	270	short chain dehydrogenase; Provisional	94.0
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.0
PRK07791	286	short chain dehydrogenase; Provisional	93.98
PRK08223	287	hypothetical protein; Validated	93.98
PRK12743	256	oxidoreductase; Provisional	93.97
PRK06849	389	hypothetical protein; Provisional	93.95
PLN00016	378	RNA-binding protein; Provisional	93.94
PRK14902	444	16S rRNA methyltransferase B; Provisional	93.94
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.92
KOG1252	362	consensus Cystathionine beta-synthase and related	93.9
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.89
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	93.87
PTZ00146	293	fibrillarin; Provisional	93.85
PRK10669	558	putative cation:proton antiport protein; Provision	93.83
PRK12480	330	D-lactate dehydrogenase; Provisional	93.8
PRK14901	434	16S rRNA methyltransferase B; Provisional	93.74
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	93.72
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	93.71
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	93.7
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	93.7
PRK05855	582	short chain dehydrogenase; Validated	93.68
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.68
PRK15068	322	tRNA mo(5)U34 methyltransferase; Provisional	93.68
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	93.64
PRK10901	427	16S rRNA methyltransferase B; Provisional	93.64
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.62
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	93.61
PF05185	448	PRMT5: PRMT5 arginine-N-methyltransferase; InterPr	93.6
PRK06436	303	glycerate dehydrogenase; Provisional	93.59
PRK08278	273	short chain dehydrogenase; Provisional	93.59
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.58
PRK13403	335	ketol-acid reductoisomerase; Provisional	93.58
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.55
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	93.52
PRK06153	393	hypothetical protein; Provisional	93.51
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	93.5
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.5
COG4106	257	Tam Trans-aconitate methyltransferase [General fun	93.49
PRK03612	521	spermidine synthase; Provisional	93.49

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=2.8e-63  Score=463.95  Aligned_cols=320  Identities=31%  Similarity=0.452  Sum_probs=297.5

Q ss_pred             ccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      +++|||+++.++++++++++++.|+|+++||+|||+|+|+|++|++.++|.++..  .+|.++|||.+|+|+++|++|++
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~   78 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVTG   78 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCcc
Confidence            5789999999999999999999999999999999999999999999999999888  79999999999999999999999


Q ss_pred             cCCCCEEEe-eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           93 VKERDLVLP-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        93 ~~~Gd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      |++||||.+ ....+|+.|++|++|++++|+++..   .|++.+|                   +|+||+++|+++++++
T Consensus        79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~i  136 (339)
T COG1064          79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKI  136 (339)
T ss_pred             CCCCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEEC
Confidence            999999999 8889999999999999999999776   8888988                   9999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      |++++++.||.+.|+..|.|+++ +..+++||++|+|.|.|++|++++|+||++|+ +|++++++++|++.++++||+++
T Consensus       137 P~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~  214 (339)
T COG1064         137 PEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHV  214 (339)
T ss_pred             CCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEE
Confidence            99999999999999999999975 66999999999999999999999999999998 99999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      ++.++   +++.+.+.+.    +|+++|+++ +.+++.++++|+++ |+++++|........+++...+.. +++|.||.
T Consensus       215 i~~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~  285 (339)
T COG1064         215 INSSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSL  285 (339)
T ss_pred             EEcCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEe
Confidence            99876   6777777653    999999999 78899999999997 999999986423345577777776 99999999


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGLL  370 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~l  370 (373)
                      .++   +.++++++++..+|++.+   +.++++++++|++.|.
T Consensus       286 ~g~---~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~  325 (339)
T COG1064         286 VGT---RADLEEALDFAAEGKIKPEILETIPLDEINEAYERME  325 (339)
T ss_pred             cCC---HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHH
Confidence            888   789999999999999997   4899999999998875

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=8.1e-63  Score=451.55  Aligned_cols=348  Identities=43%  Similarity=0.739  Sum_probs=333.6

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |++||++..++++||+++++.+++|++||||||+.|+|+||+|...+.|..+.   .+|.++|||++|+|++||+.|+++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~---~~P~vLGHEgAGiVe~VG~gVt~v   77 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE---GFPAVLGHEGAGIVEAVGEGVTSV   77 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC---CCceecccccccEEEEecCCcccc
Confidence            57899999999999999999999999999999999999999999999998877   499999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      +|||+|+..+.-+|+.|.+|++|.+++|.....+-..|...||..++. .++.++.|+++.++|++|.++++.+++++++
T Consensus        78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~  156 (366)
T COG1062          78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDP  156 (366)
T ss_pred             CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCC
Confidence            999999999999999999999999999999888877888899999998 8999999999999999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ..+++.++++-|.+.|.+.++.+.+++++|++|.|.|.|++|++++|-|+..|+++||+++.+++|+++++++||++++|
T Consensus       157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn  236 (366)
T COG1062         157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVN  236 (366)
T ss_pred             CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCc-cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecC
Q 017335          254 PATCGDK-TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG  332 (373)
Q Consensus       254 ~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (373)
                      +++   . ++.+.+.++|++++|++|||+|....+.++++++.+ ||+.+.+|....+..++++..+|..+.+++|+.+|
T Consensus       237 ~~~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G  312 (366)
T COG1062         237 PKE---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG  312 (366)
T ss_pred             chh---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence            997   4 699999999999999999999999999999999999 59999999998888999999998889999999999


Q ss_pred             CCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          333 GLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ....+.+++++++++.+|+++.     ++++|+++|+||..+
T Consensus       313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m  354 (366)
T COG1062         313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLM  354 (366)
T ss_pred             CCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHH
Confidence            9999999999999999999996     678899999999765

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-61  Score=436.88  Aligned_cols=356  Identities=54%  Similarity=0.893  Sum_probs=336.9

Q ss_pred             CCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        10 ~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      +.++.+|||++..++++||.++|+.+++|+.+||+||+.++++||+|...++|..+..  -+|.++|||++|+|+++|..
T Consensus         2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~--~fP~IlGHEaaGIVESvGeg   79 (375)
T KOG0022|consen    2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG--LFPVILGHEAAGIVESVGEG   79 (375)
T ss_pred             CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc--cCceEecccceeEEEEecCC
Confidence            4578999999999999999999999999999999999999999999999999987655  79999999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCC-CCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      |+++++||+|+..+.-.|+.|.+|+++..|+|.+...... .++..||..||- .+|.+++||.+.++|+||.+++...+
T Consensus        80 V~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v  158 (375)
T KOG0022|consen   80 VTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISV  158 (375)
T ss_pred             ccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeeccee
Confidence            9999999999999999999999999999999999888743 555569999998 88889999999999999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      .+|++..+++.++++.|.+.|+|.|+++.+.++||++|.|.|.|++|+++++-||+.|+++||++|.+++|.+.++++|+
T Consensus       159 ~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGa  238 (375)
T KOG0022|consen  159 AKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGA  238 (375)
T ss_pred             EecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEE
Q 017335          249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG  328 (373)
Q Consensus       249 ~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g  328 (373)
                      ++.+|+.+ ..+.+.+.+.++|++++|+-|||+|...++.+++.+...|||+-+.+|....++.+++.+++++.+.++.|
T Consensus       239 Te~iNp~d-~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G  317 (375)
T KOG0022|consen  239 TEFINPKD-LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG  317 (375)
T ss_pred             ceecChhh-ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence            99999985 33468999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          329 TYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +.+|.++.+.+++.+++.+.+++++.     +.+|++++++||+.|
T Consensus       318 s~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll  363 (375)
T KOG0022|consen  318 SAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLL  363 (375)
T ss_pred             EecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHH
Confidence            99999999999999999999999986     777788889998765

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-56  Score=406.54  Aligned_cols=321  Identities=24%  Similarity=0.369  Sum_probs=279.5

Q ss_pred             ccceeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCC-CCCCccccCcccEEEEEeCCCC
Q 017335           13 VIRCKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      ..+|+|+++.++++ +++++.|.|++ .|+||+|++.++|||+||++.+........ ...|.++|||.+|+|+++|++|
T Consensus         2 ~~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V   80 (354)
T KOG0024|consen    2 AADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV   80 (354)
T ss_pred             CcccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence            35799999999998 99999999986 999999999999999999999986654331 3589999999999999999999


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +++++||||++.+..+|++|+.|++|++|+|++..+.  .....+|                   ++++|+..+++++++
T Consensus        81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~--atpp~~G-------------------~la~y~~~~~dfc~K  139 (354)
T KOG0024|consen   81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC--ATPPVDG-------------------TLAEYYVHPADFCYK  139 (354)
T ss_pred             cccccCCeEEecCCCccccchhhhCcccccCCccccc--cCCCcCC-------------------ceEEEEEechHheee
Confidence            9999999999999999999999999999999999983  3445667                   999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      |||+++++++|++. +++++|+| .+++.+++|++|||+|+|++|+++...||++|+++|++++..++|++.++++|++.
T Consensus       140 LPd~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~  217 (354)
T KOG0024|consen  140 LPDNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV  217 (354)
T ss_pred             CCCCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence            99999999999999 89999996 58899999999999999999999999999999999999999999999999999998


Q ss_pred             EEcCCCCC-CccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEE
Q 017335          251 FINPATCG-DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC  327 (373)
Q Consensus       251 vi~~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  327 (373)
                      +.+..... .+++.+.+....+. .+|+.|||+|...+++.++.+++.+ |++++.|..  ....+|+..+... +++++
T Consensus       218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~  294 (354)
T KOG0024|consen  218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLR  294 (354)
T ss_pred             EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeee
Confidence            88776621 12333444444443 5999999999999999999999997 999999863  3466888888777 99999


Q ss_pred             EeecCCCCchhHHHHHHHHHHcCCCCCCcccccCCC
Q 017335          328 GTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPN  363 (373)
Q Consensus       328 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~  363 (373)
                      |+.-..   ..+++.+++++.+|+++++.++++++.
T Consensus       295 g~fry~---~~~y~~ai~li~sGki~~k~lIT~r~~  327 (354)
T KOG0024|consen  295 GSFRYC---NGDYPTAIELVSSGKIDVKPLITHRYK  327 (354)
T ss_pred             eeeeec---cccHHHHHHHHHcCCcCchhheecccc
Confidence            996333   468999999999999997555544443

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-54  Score=393.23  Aligned_cols=335  Identities=25%  Similarity=0.370  Sum_probs=296.8

Q ss_pred             CCCCCcccceeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEE
Q 017335            7 SPKAGKVIRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE   84 (373)
Q Consensus         7 ~~~~~~~~~~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~   84 (373)
                      |++...|.+++++.++.++.  ++++.+++.|+|+++||+|||+++|||++|++.++|.++..  .+|.++|||.+|+|+
T Consensus         1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s--~~PlV~GHEiaG~Vv   78 (360)
T KOG0023|consen    1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLS--KYPLVPGHEIAGVVV   78 (360)
T ss_pred             CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcc--cCCccCCceeeEEEE
Confidence            35566789999999999877  46779999999999999999999999999999999999887  899999999999999


Q ss_pred             EeCCCCCccCCCCEEEe-eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEe
Q 017335           85 SVGEYVEEVKERDLVLP-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV  163 (373)
Q Consensus        85 ~vG~~v~~~~~Gd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v  163 (373)
                      ++|++|+.|++||||-+ ....+|+.|++|+++++++|++.-.+ ..|+..||              .-++|+|++|+++
T Consensus        79 kvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DG--------------t~~~ggf~~~~~v  143 (360)
T KOG0023|consen   79 KVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDG--------------TITQGGFQEYAVV  143 (360)
T ss_pred             EECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCC--------------CCccCccceeEEE
Confidence            99999999999999954 44688999999999999999964443 36777777              2345789999999


Q ss_pred             eccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHH
Q 017335          164 DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEI  242 (373)
Q Consensus       164 ~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~  242 (373)
                      ++.++++||++++.+.||.+.|+..|.|+.| ...++.||++|.|.|+|++|.+++|+||++|. +|+++++++ .|.+.
T Consensus       144 ~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea  221 (360)
T KOG0023|consen  144 DEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEA  221 (360)
T ss_pred             eeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHH
Confidence            9999999999999999999999999999965 77889999999999997799999999999999 999999988 55666


Q ss_pred             HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh
Q 017335          243 GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK  322 (373)
Q Consensus       243 ~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  322 (373)
                      ++.|||+..++..+  ++++.+++.+.+++++|-|.+-  ....++.++.+++.+ |++|++|.+..  ++.++.+.+..
T Consensus       222 ~~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil  294 (360)
T KOG0023|consen  222 IKSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLIL  294 (360)
T ss_pred             HHhcCcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhc
Confidence            67799999998873  3899999999888778877766  445589999999997 99999998543  78888888887


Q ss_pred             -CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccccc
Q 017335          323 -GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGLL  370 (373)
Q Consensus       323 -~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~l  370 (373)
                       .++|.||.+|.   +.+.++++++..+|.+..  +..+++++++|++++.
T Consensus       295 ~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~  342 (360)
T KOG0023|consen  295 GRKSIKGSIVGS---RKETQEALDFVARGLIKSPIELVKLSEVNEAYERME  342 (360)
T ss_pred             ccEEEEeecccc---HHHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHH
Confidence             89999999999   789999999999999986  8999999999998764

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.8e-51  Score=401.95  Aligned_cols=360  Identities=53%  Similarity=0.888  Sum_probs=293.9

Q ss_pred             CCCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335            8 PKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus         8 ~~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      .++.+|++|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+... .+|.++|||++|+|+++|
T Consensus         3 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~-~~p~i~GhE~~G~V~~vG   81 (381)
T PLN02740          3 ETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQR-AYPRILGHEAAGIVESVG   81 (381)
T ss_pred             cccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccC-CCCccccccceEEEEEeC
Confidence            4456889999999999987789999999999999999999999999999999988753221 578999999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCC-CCCCCCCcccccc-CCceecccccccceeeeEEeec
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP-NMPRDGTSRFREL-KGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~-g~~~~G~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      +++++|++||||++.+...|+.|++|+.|.++.|++....... ....+|..++... .+....+++..|+|+||+.+|.
T Consensus        82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~  161 (381)
T PLN02740         82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS  161 (381)
T ss_pred             CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence            9999999999999999999999999999999999886532100 0000110000000 0000011122469999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      +.++++|+++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.+++
T Consensus       162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~  241 (381)
T PLN02740        162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE  241 (381)
T ss_pred             HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence            99999999999999999999999999988788899999999999999999999999999998669999999999999999


Q ss_pred             cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcE
Q 017335          246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS  325 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~  325 (373)
                      +|++++++.++ .+.++.+.+.+++++++|++||++|...++..++.++++++|+++.+|.......++++...++++++
T Consensus       242 ~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~  320 (381)
T PLN02740        242 MGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRS  320 (381)
T ss_pred             cCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCe
Confidence            99999998765 11247778888876689999999998877999999998823999999985443335566555556899


Q ss_pred             EEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +.|+..+.+....++.++++++.+|++++     +.|+++++++|++.+
T Consensus       321 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~  369 (381)
T PLN02740        321 ITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLL  369 (381)
T ss_pred             EEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHH
Confidence            99998777665678999999999999864     779999999988654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=5.7e-51  Score=397.07  Aligned_cols=346  Identities=36%  Similarity=0.633  Sum_probs=290.0

Q ss_pred             eeeEEeecCC--------CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335           16 CKAAICRIPG--------KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus        16 ~ka~~~~~~~--------~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      |||+++.+.|        +.++++++|.|+|+++||+|||.++|||++|++.+.|..+.   .+|.++|||++|+|+++|
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~GhE~~G~V~~vG   77 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR---PLPMALGHEAAGVVVEVG   77 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC---CCCccCCccceeEEEEeC
Confidence            7999999865        33899999999999999999999999999999999887542   578999999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      ++++++++||||++.+...|+.|..|+.|.+++|.........|...+|...+....+. ..+..+.|+|+||+.+|++.
T Consensus        78 ~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~-~~~~~g~G~~aey~~v~~~~  156 (371)
T cd08281          78 EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGE-INHHLGVSAFAEYAVVSRRS  156 (371)
T ss_pred             CCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcc-cccccCcccceeeEEecccc
Confidence            99999999999999888899999999999999998764321122222221010000000 00111235999999999999


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      ++++|++++++++++++++++|||.++.+...++++++|||+|+|++|++++|+||.+|+++|+++++++++++.++++|
T Consensus       157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G  236 (371)
T cd08281         157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG  236 (371)
T ss_pred             eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence            99999999999999999999999998878889999999999999999999999999999967999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV  326 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  326 (373)
                      +++++++.+   .++.+.+++.+++++|+||||+|....+..++++++++ |+++.+|.......++++...++. ++++
T Consensus       237 a~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  312 (371)
T cd08281         237 ATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTL  312 (371)
T ss_pred             CceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEE
Confidence            999999887   78888888887768999999999877799999999997 999999975433345677777776 9999


Q ss_pred             EEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          327 CGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +|+..+.+...++++++++++++|++++     +.|+++++++|++.+
T Consensus       313 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  360 (371)
T cd08281         313 KGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRL  360 (371)
T ss_pred             EEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHH
Confidence            9998776555678999999999999974     678999999988754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.6e-50  Score=391.97  Aligned_cols=350  Identities=43%  Similarity=0.769  Sum_probs=287.4

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++..++++++++++|.|+|+++||+|||.++|||++|++.+.|..+..  .+|.++|||++|+|+++|+++++|++
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~   79 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG--VFPVILGHEGAGIVEAVGEGVTSVKV   79 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC--CCCeeeccccEEEEEEECCCCccCCC
Confidence            8999999888779999999999999999999999999999999998876544  67899999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||||++.+...|+.|.+|+.|.+++|.+.......|+..+|..++.. +|....+..+.|+|+||+.+|++.++++|+++
T Consensus        80 GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        80 GDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSK-DGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCcccccc-CCCcccccccCccceeeEEechhheEECCCCC
Confidence            99999998899999999999999999875432223333333211111 01000111224699999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++++++++.|||+++.+...+++|++|||+|+|++|++++|+||.+|+++|+++++++++++.++++|++++++..
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~  238 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN  238 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence            99999999999999999887888999999999999999999999999999986799999999999999999999999876


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK  335 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (373)
                      + .+.++.+.+.+++++++|++|||+|.+.++..+++++++++|+++.+|.......+++....++.+..+.|+..+...
T Consensus       239 ~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  317 (368)
T TIGR02818       239 D-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVK  317 (368)
T ss_pred             c-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCC
Confidence            3 124566778777777899999999987779999999987229999999854333445555555555567887665544


Q ss_pred             chhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          336 PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       336 ~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .+.++.++++++++|++++     +.|+++++.+|++.+
T Consensus       318 ~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~  356 (368)
T TIGR02818       318 GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLM  356 (368)
T ss_pred             cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHH
Confidence            4678999999999999863     789999998888654

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=5.2e-50  Score=389.94  Aligned_cols=352  Identities=49%  Similarity=0.820  Sum_probs=291.0

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      .+|||+++..++++++++++|.|.|+++||+|||.++|||++|++.+.|..+..  .+|.++|||++|+|+++|+++++|
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~   78 (368)
T cd08300           1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG--LFPVILGHEGAGIVESVGEGVTSV   78 (368)
T ss_pred             CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC--CCCceeccceeEEEEEeCCCCccC
Confidence            369999999887779999999999999999999999999999999998876544  689999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||||++.+...|+.|.+|+.++++.|.+.......|...+|..++... |....+..+.|+|+||+.++++.++++|+
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~-g~~~~~~~~~G~~aey~~v~~~~~~~iP~  157 (368)
T cd08300          79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCK-GKPIYHFMGTSTFSEYTVVAEISVAKINP  157 (368)
T ss_pred             CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccC-CcccccccccccceeEEEEchhceEeCCC
Confidence            99999999999999999999999999998754321123333332111111 11111122346999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+||.+|+++|+++++++++++.++++|++++++
T Consensus       158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~  237 (368)
T cd08300         158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVN  237 (368)
T ss_pred             CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence            99999999999999999998878889999999999999999999999999999967999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG  333 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (373)
                      +++ .++++.+.+.+++++++|+|||++|+...+..+++++++++|+++.+|.......++++...+..+.++.++..+.
T Consensus       238 ~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  316 (368)
T cd08300         238 PKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGG  316 (368)
T ss_pred             ccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecc
Confidence            875 1125778888887778999999999877799999999873399999997543333455555555566778877766


Q ss_pred             CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +..++++.++++++++|++++     +.|+++++.+|++.+
T Consensus       317 ~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~  357 (368)
T cd08300         317 WKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLM  357 (368)
T ss_pred             cCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHH
Confidence            666788999999999999974     789999999988754

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=7.9e-50  Score=388.74  Aligned_cols=352  Identities=53%  Similarity=0.891  Sum_probs=291.5

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      ++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++.+.|..+..  .+|.++|||++|+|+++|+++++|
T Consensus         1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~   78 (369)
T cd08301           1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTP--LFPRILGHEAAGIVESVGEGVTDL   78 (369)
T ss_pred             CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCC--CCCcccccccceEEEEeCCCCCcc
Confidence            489999999887779999999999999999999999999999999998876544  678999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~-~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      ++||||++.+..+|+.|.+|+.|+++.|.+.......|... ++...+.. .|....++...|+|+||+.+|+..++++|
T Consensus        79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~iP  157 (369)
T cd08301          79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSI-NGKPIYHFVGTSTFSEYTVVHVGCVAKIN  157 (369)
T ss_pred             ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCcccccc-CCcceeeeeccccceeEEEEecccEEECC
Confidence            99999999999999999999999999998854321122211 00000000 00011112233689999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++++++++.+.|||.++.+...+++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|+++++
T Consensus       158 ~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i  237 (369)
T cd08301         158 PEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV  237 (369)
T ss_pred             CCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence            99999999999999999999888888999999999999999999999999999986799999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhcc-CCceEEEEcccCCCCccccCHHHHhhCcEEEEeec
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF  331 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (373)
                      ++.+ ...++.+.+++++++++|++||++|....+..+++++++ + |+++.+|.......++++...+++++++.|+..
T Consensus       238 ~~~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  315 (369)
T cd08301         238 NPKD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLF  315 (369)
T ss_pred             cccc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcccccCHHHHhcCCeEEEEec
Confidence            8764 113466777777766899999999988778999999999 4 999999986543455666655556999999987


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGLL  370 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~l  370 (373)
                      +.+..+++++++++++.+|++++     +.|+++++++|+..+.
T Consensus       316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~  359 (369)
T cd08301         316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLL  359 (369)
T ss_pred             CCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHH
Confidence            77665678999999999998864     6789999999887553

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=5.2e-50  Score=388.51  Aligned_cols=338  Identities=31%  Similarity=0.540  Sum_probs=287.2

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+.   .+|.++|||++|+|+++|+++++|+
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~G~e~~G~V~~vG~~v~~~~   77 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND---EFPFLLGHEAAGVVEAVGEGVTDVA   77 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc---cCCcccccceEEEEEEeCCCCcccC
Confidence            6999999999888999999999999999999999999999999998886432   5789999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCC-CCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY-RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      +||||++.+...|+.|.+|..|++++|....... ..++ .+|         ...+..+..|+|+||+.+|++.++++|+
T Consensus        78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~  147 (358)
T TIGR03451        78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TELSPALGIGAFAEKTLVHAGQCTKVDP  147 (358)
T ss_pred             CCCEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------cccccccccccccceEEEehhheEECCC
Confidence            9999999999999999999999999997532110 0000 011         0000111235999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++++++++.+.++|.++.+...+++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++++++
T Consensus       148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~  227 (358)
T TIGR03451       148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN  227 (358)
T ss_pred             CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence            99999999999999999988778888999999999999999999999999999966999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +++   .++.+.+.+.+++ ++|+||||+|++.++..++++++++ |+++.+|........+++...++. ++++.++..
T Consensus       228 ~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~  303 (358)
T TIGR03451       228 SSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY  303 (358)
T ss_pred             CCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence            877   7888888888877 8999999999877799999999997 999999985432345677766666 899998866


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +.....++++++++++++|++++     +.|+++++.+|++.+
T Consensus       304 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~  346 (358)
T TIGR03451       304 GDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKM  346 (358)
T ss_pred             CCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHH
Confidence            54444678999999999999964     678999999888654

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=6.1e-49  Score=377.94  Aligned_cols=320  Identities=28%  Similarity=0.436  Sum_probs=277.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++. ++++++|.|.|+++||+|||.+++||++|++.+.+.+.... .+|.++|||++|+|+++|++|+++++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~   78 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPA-YQGVIPGHEPAGVVVAVGPGVTHFRV   78 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccC-CCCceeccCceEEEEEECCCCccCCC
Confidence            79999998776 99999999999999999999999999999998876643221 46789999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|++.+...|+.|+.|+.|++++|.+...  ..|...+|                   +|+||+.+|.+.++++|+++
T Consensus        79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~  137 (339)
T cd08239          79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDL  137 (339)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCC
Confidence            9999999999999999999999999987653  24555556                   99999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++.+++++.|||+++ +...+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++++++++
T Consensus       138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~  216 (339)
T cd08239         138 SFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG  216 (339)
T ss_pred             CHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC
Confidence            9999999999999999976 567899999999999999999999999999994499999999999999999999999987


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      +   .+ .+.+.+.+++ ++|+||||+|+...++.++++++++ |+++.+|.... ..+.. ...++. +++++|+..+.
T Consensus       217 ~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~-~~~~~~~~~~i~g~~~~~  289 (339)
T cd08239         217 Q---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEV-SNDLIRKQRTLIGSWYFS  289 (339)
T ss_pred             c---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCc-HHHHHhCCCEEEEEecCC
Confidence            6   55 6677777777 8999999999988778999999997 99999997433 22222 233444 89999987554


Q ss_pred             CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                         .+++.++++++++|++++     +.|+++++++|++.+
T Consensus       290 ---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~  327 (339)
T cd08239         290 ---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALF  327 (339)
T ss_pred             ---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHH
Confidence               578999999999999874     678899998888653

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.5e-48  Score=380.80  Aligned_cols=350  Identities=49%  Similarity=0.850  Sum_probs=281.9

Q ss_pred             CCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        10 ~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      ++....|||+++.++++.++++++|.|+|+++||+|||.++|||++|++.+.+..     .+|.++|||++|+|+++|++
T Consensus         7 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~   81 (378)
T PLN02827          7 QPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEG   81 (378)
T ss_pred             CcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCC
Confidence            4444789999999887669999999999999999999999999999999887642     36789999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeeccce
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~-~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +++|++||||++.+...|+.|.+|++|.+++|++.... ..|... ++...|.. .|...-++...|+|+||+.+|++.+
T Consensus        82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~-~g~~~~~~~~~G~~aeyv~v~~~~~  159 (378)
T PLN02827         82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSI-KGKPVYHYCAVSSFSEYTVVHSGCA  159 (378)
T ss_pred             CcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccc-cCcccccccccccceeeEEechhhe
Confidence            99999999999999899999999999999999874321 011100 00000000 0000000001359999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +++|+++++++++.+.+.+.++|.++.+..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|+
T Consensus       160 ~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa  239 (378)
T PLN02827        160 VKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGV  239 (378)
T ss_pred             EECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence            99999999999999998999999877777889999999999999999999999999998668899999999999999999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH-HHHh-hCcEE
Q 017335          249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEIL-KGRSV  326 (373)
Q Consensus       249 ~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~-~~~~i  326 (373)
                      ++++++++ .+.++.+.+.+++++++|+|||++|....+..+++.+++++|+++.+|.....  .+++. ..++ +++++
T Consensus       240 ~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i  316 (378)
T PLN02827        240 TDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTL  316 (378)
T ss_pred             cEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceE
Confidence            99998764 11357777777776689999999998777899999999932999999985432  23332 2344 49999


Q ss_pred             EEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          327 CGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .|+..+.+....++.++++++++|+|++     +.|+++++.+|++.+
T Consensus       317 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~  364 (378)
T PLN02827        317 KGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELM  364 (378)
T ss_pred             EeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHH
Confidence            9998776655678999999999999986     678899998887765

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=4.8e-48  Score=375.72  Aligned_cols=349  Identities=51%  Similarity=0.874  Sum_probs=289.1

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      +.|||+++.+.+++++++++|.|.++++||+|||.++++|++|++.+.|..+ .  .+|.++|||++|+|+++|++++++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~   77 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-T--LFPVILGHEGAGIVESVGEGVTNL   77 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-C--CCCeecccceeEEEEeeCCCCccC
Confidence            4689999998877799999999999999999999999999999999988654 2  678999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|++.+...|+.|.+|+.|.+++|++..+. ..|+..+|...+.. .+....++.+.|+|+||+.++.+.++++|+
T Consensus        78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~  155 (365)
T cd08277          78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDP  155 (365)
T ss_pred             CCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCC
Confidence            9999999998999999999999999999986542 12333222111100 011111122346999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++
T Consensus       156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~  235 (365)
T cd08277         156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFIN  235 (365)
T ss_pred             CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEec
Confidence            99999999999999999998878889999999999999999999999999999867999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG  333 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (373)
                      .++ .+.++.+.+.+++++++|+||||+|....+..+++++++++|+++.+|.... ...+++...++.++++.|+..+.
T Consensus       236 ~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~  313 (365)
T cd08277         236 PKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGG  313 (365)
T ss_pred             ccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCC
Confidence            765 1123566777777668999999999877789999999772299999998542 34466666666689999998877


Q ss_pred             CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +..+.++.++++++++++++.     +.|+++++++|++.+
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~  354 (365)
T cd08277         314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLM  354 (365)
T ss_pred             CChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHH
Confidence            665678999999999998764     679999999988654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=3.7e-48  Score=375.72  Aligned_cols=328  Identities=21%  Similarity=0.323  Sum_probs=275.6

Q ss_pred             CCCCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEe
Q 017335            7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV   86 (373)
Q Consensus         7 ~~~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v   86 (373)
                      +|++.-|++++++.+.+....+++.+++.|+|+++||+|||.++|||++|++.+.|..+..  .+|.++|||++|+|+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~v   81 (360)
T PLN02586          4 SPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFT--RYPIVPGHEIVGIVTKL   81 (360)
T ss_pred             ChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCC--CCCccCCcceeEEEEEE
Confidence            5777889999999998876669999999999999999999999999999999998765433  57899999999999999


Q ss_pred             CCCCCccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCC----CCCCCCCCCccccccCCceecccccccceeeeE
Q 017335           87 GEYVEEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS  161 (373)
Q Consensus        87 G~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~  161 (373)
                      |++|++|++||||++.+. ..|+.|.+|+.|.+++|++.....    ..|...+|                   +|+||+
T Consensus        82 G~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~  142 (360)
T PLN02586         82 GKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYG-------------------GYSDMI  142 (360)
T ss_pred             CCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCC-------------------ccceEE
Confidence            999999999999986654 479999999999999998754310    01223345                   999999


Q ss_pred             EeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH-H
Q 017335          162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-F  240 (373)
Q Consensus       162 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~  240 (373)
                      .+|++.++++|+++++++++.+++.+.|+|+++.+...+++|++|||.|+|++|++++|+||.+|+ +|++++.++++ .
T Consensus       143 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~  221 (360)
T PLN02586        143 VVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKED  221 (360)
T ss_pred             EEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhh
Confidence            999999999999999999999999999999977666667899999999999999999999999999 78887766665 4


Q ss_pred             HHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH
Q 017335          241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI  320 (373)
Q Consensus       241 ~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~  320 (373)
                      +.++++|+++++++++   .   +.+.+.++ ++|+|||++|....++.++++++++ |+++.+|....  ..+++...+
T Consensus       222 ~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~  291 (360)
T PLN02586        222 EAINRLGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFPL  291 (360)
T ss_pred             hHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHHH
Confidence            5567899999998765   2   23444443 6999999999877789999999997 99999997432  356677666


Q ss_pred             hh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          321 LK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       321 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      +. +..+.|+..+.   ..+++++++++++|++++  +.|+++++++|++.+
T Consensus       292 ~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~~~~l~~~~~A~~~~  340 (360)
T PLN02586        292 VLGRKLVGGSDIGG---IKETQEMLDFCAKHNITADIELIRMDEINTAMERL  340 (360)
T ss_pred             HhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCcEEEEeHHHHHHHHHHH
Confidence            66 77888876554   578999999999999986  679999999998754

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-48  Score=373.75  Aligned_cols=318  Identities=20%  Similarity=0.342  Sum_probs=266.0

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhccc-CCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      |...+||+++.++++ +++++++.| ++++||||||.++|||++|++.+. |........+|.++|||++|+|+++  ++
T Consensus         1 ~~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v   76 (343)
T PRK09880          1 MQVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS   76 (343)
T ss_pred             CcccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence            345689999999988 999999987 689999999999999999999875 4332211157899999999999999  67


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-----CCCCCccccccCCceecccccccceeeeEEeec
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-----~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      ++|++||||++.+..+|+.|.+|+.|++++|++...   .|.     ..+|                   +|+||+.+|+
T Consensus        77 ~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~~~~~G-------------------~~aey~~v~~  134 (343)
T PRK09880         77 SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYFPHVDG-------------------GFTRYKVVDT  134 (343)
T ss_pred             ccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccccCCCCC-------------------ceeeeEEech
Confidence            899999999999999999999999999999988654   232     1244                   9999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      +.++++|+++++++++.. .++++||+++ +.....++++|||+|+|++|++++|+|+.+|+++|+++++++++++.+++
T Consensus       135 ~~~~~~P~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~  212 (343)
T PRK09880        135 AQCIPYPEKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE  212 (343)
T ss_pred             HHeEECCCCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH
Confidence            999999999999876644 4888999976 45566789999999999999999999999999779999999999999999


Q ss_pred             cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      +|+++++++++   .++.+ +... .+++|+||||+|.+.+++.++++++++ |+++.+|....  ..+++...++. ++
T Consensus       213 lGa~~vi~~~~---~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~  284 (343)
T PRK09880        213 MGADKLVNPQN---DDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEI  284 (343)
T ss_pred             cCCcEEecCCc---ccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCc
Confidence            99999999876   45433 2222 236999999999977799999999997 99999997433  34667777666 99


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ++.|+...    .++++++++++++|++++     +.|+++++++|++.+
T Consensus       285 ~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  330 (343)
T PRK09880        285 SLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFA  330 (343)
T ss_pred             EEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHH
Confidence            99998532    367999999999999975     678999999888654

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=4.7e-48  Score=372.64  Aligned_cols=323  Identities=28%  Similarity=0.369  Sum_probs=261.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCc-cccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||++++..++...++++.+.|.+.++||+|||.++|||+||++.+++..+..  ..|. ++|||++|+|+++| .++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~--~~~~~i~GHE~~G~V~evG-~~~~~~   77 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV--PPGDIILGHEFVGEVVEVG-VVRGFK   77 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC--CCCCcccCccceEEEEEec-cccCCC
Confidence            6788888877635577777777899999999999999999999999987665  4555 99999999999999 777899


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCC--CCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE-c
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG--YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK-I  171 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-l  171 (373)
                      +||||++.+..+|+.|.+|+.|.+++|++.++.  ...+...+|                   +|+||+.+|.+++++ +
T Consensus        78 ~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G-------------------~~aEyv~vp~~~~~~~~  138 (350)
T COG1063          78 VGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG-------------------GFAEYVRVPADFNLAKL  138 (350)
T ss_pred             CCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC-------------------ceEEEEEeccccCeecC
Confidence            999999999999999999999999999965431  011111445                   999999999655555 5


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD  250 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~  250 (373)
                      |++++ .+++++..++.++|++.......+++++|+|+|+|++|++++++++.+|+++|++++.+++|++++++ .|++.
T Consensus       139 pd~~~-~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~  217 (350)
T COG1063         139 PDGID-EEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADV  217 (350)
T ss_pred             CCCCC-hhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeE
Confidence            88884 45555555999998864455556666699999999999999999999999999999999999999998 66776


Q ss_pred             EEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335          251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  328 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  328 (373)
                      +++...   .+....+.+.+++ ++|++|||+|...+++.++++++++ |+++++|.+..... .++...++. ++++.|
T Consensus       218 ~~~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~g  292 (350)
T COG1063         218 VVNPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRG  292 (350)
T ss_pred             eecCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEe
Confidence            776665   4677788888888 9999999999998999999999997 99999998654332 566666666 999999


Q ss_pred             eecCCCCchhHHHHHHHHHHcCCCCCCc-----ccccCCCccccc
Q 017335          329 TYFGGLKPRSDIATLAQKYLDKVHLRSS-----FHLCDPNSDSAG  368 (373)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~-----~~~~~~~~a~~~  368 (373)
                      +...  ....+++++++++.+|+++++.     +++++++++++.
T Consensus       293 s~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~  335 (350)
T COG1063         293 SLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYEL  335 (350)
T ss_pred             ccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHH
Confidence            9421  1246899999999999999753     344555555543

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=3.6e-47  Score=362.31  Aligned_cols=301  Identities=26%  Similarity=0.362  Sum_probs=261.5

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++.+.+.+  ++++++|.|.|+++||||||.++|||+.|...+.|...... .+|+++|.|++|+|+++|++|++|
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~-~~P~i~G~d~aG~V~avG~~V~~~   79 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVR-PLPFIPGSEAAGVVVAVGSGVTGF   79 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCC-CCCCcccceeEEEEEEeCCCCCCc
Confidence            789999987765  88999999999999999999999999999999999732222 699999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||||+....                         .+  .+                   |+|+||+.+|++.++++|+
T Consensus        80 ~~GdrV~~~~~-------------------------~~--~~-------------------G~~AEy~~v~a~~~~~~P~  113 (326)
T COG0604          80 KVGDRVAALGG-------------------------VG--RD-------------------GGYAEYVVVPADWLVPLPD  113 (326)
T ss_pred             CCCCEEEEccC-------------------------CC--CC-------------------CcceeEEEecHHHceeCCC
Confidence            99999986530                         00  22                   3999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++||++++.++|||+++.+..++++|++|||+|+ |++|++++|+||++|+ +++++.+++++.++++++|+++++
T Consensus       114 ~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi  192 (326)
T COG0604         114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVI  192 (326)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEE
Confidence            99999999999999999999999899999999999987 9999999999999998 777777788888899999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      ++++   .+|.+++++++++ ++|+|||++|+.. +..++++|+++ |+++.+|...+....+++...++. .++++|..
T Consensus       193 ~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~  267 (326)
T COG0604         193 NYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT  267 (326)
T ss_pred             cCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEec
Confidence            9988   7899999999998 8999999999888 88999999997 999999985433455677666665 88888887


Q ss_pred             cCCC---CchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          331 FGGL---KPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       331 ~~~~---~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ....   ...+.+.++.+++++|++++   ..|++++...+.++.
T Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~  312 (326)
T COG0604         268 LGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHL  312 (326)
T ss_pred             ceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHH
Confidence            6544   22467888999999999997   689999965555543

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=4.9e-47  Score=371.38  Aligned_cols=324  Identities=26%  Similarity=0.367  Sum_probs=260.9

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCCC-------CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPPK-------AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      -|||+++.++++ ++++++|.|+|+       +|||||||.++|||++|++.+.|..+.   .+|.++|||++|+|+++|
T Consensus         2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~---~~p~i~GhE~~G~V~~vG   77 (393)
T TIGR02819         2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA---PTGLVLGHEITGEVIEKG   77 (393)
T ss_pred             CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC---CCCccccceeEEEEEEEc
Confidence            389999999887 999999999874       689999999999999999999886532   578999999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCC---CCCCCC----CCCCccccccCCceecccccccceeee
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG---YRPNMP----RDGTSRFRELKGDVIHHFLNISSFTEY  160 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---~~~g~~----~~G~~~~~~~~~~~~~~~~~~g~~a~~  160 (373)
                      ++|++|++||||++.+...|+.|.+|++|++++|.+....   ...|+.    ++|                   +|+||
T Consensus        78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G-------------------~~aey  138 (393)
T TIGR02819        78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVG-------------------GQSEY  138 (393)
T ss_pred             CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCC-------------------ceEEE
Confidence            9999999999999999999999999999999999975321   012221    234                   99999


Q ss_pred             EEeecc--ceEEcCCCCCh----hhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc
Q 017335          161 SVVDIT--HVVKITPHIPL----GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD  234 (373)
Q Consensus       161 ~~v~~~--~~~~lP~~l~~----~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~  234 (373)
                      +.+|+.  .++++|++++.    .+++++.+++.++|+++ +..+++++++|||.|+|++|++++|+|+.+|++.|++++
T Consensus       139 ~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d  217 (393)
T TIGR02819       139 VMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGD  217 (393)
T ss_pred             EEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeC
Confidence            999964  79999998753    34667777999999965 567899999999998999999999999999995567678


Q ss_pred             CChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCH--------------HHHHHHHHHhccCCc
Q 017335          235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT--------------SVMNDAFNSSREGWG  299 (373)
Q Consensus       235 ~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~G  299 (373)
                      +++++++.++++|++.+.+.+.   .++.+.+.+++++ ++|++||++|.+              .+++.++++++++ |
T Consensus       218 ~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G  293 (393)
T TIGR02819       218 LNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-G  293 (393)
T ss_pred             CCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-C
Confidence            8889999999999975443333   4677778888876 899999999985              3699999999997 9


Q ss_pred             eEEEEcccCCCCc-----------cccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC------CcccccC
Q 017335          300 KTVILGVEMHGSP-----------ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR------SSFHLCD  361 (373)
Q Consensus       300 ~~v~~G~~~~~~~-----------~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~------~~~~~~~  361 (373)
                      +++.+|.+.....           +++....++. ++++.|+.   ....+.+.++++++.+|++++      +.|++++
T Consensus       294 ~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~  370 (393)
T TIGR02819       294 AIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDD  370 (393)
T ss_pred             EEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHH
Confidence            9999998632211           1233333333 66777642   111234478999999999874      5699999


Q ss_pred             CCcccccc
Q 017335          362 PNSDSAGL  369 (373)
Q Consensus       362 ~~~a~~~~  369 (373)
                      +++|++.+
T Consensus       371 ~~~a~~~~  378 (393)
T TIGR02819       371 APEGYAEF  378 (393)
T ss_pred             HHHHHHHH
Confidence            99988754

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=4.7e-46  Score=362.53  Aligned_cols=320  Identities=23%  Similarity=0.322  Sum_probs=263.9

Q ss_pred             ceeeEE--eecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           15 RCKAAI--CRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        15 ~~ka~~--~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      +.||+.  ..+....+++.+++.|+|+++||+|||.++|||++|++.+.|.+...  .+|.++|||++|+|+++|+++++
T Consensus         4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~--~~p~i~GhE~aG~Vv~vG~~v~~   81 (375)
T PLN02178          4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFS--RYPIIPGHEIVGIATKVGKNVTK   81 (375)
T ss_pred             cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCC--CCCcccCceeeEEEEEECCCCCc
Confidence            344444  44443458888999999999999999999999999999998865433  56899999999999999999999


Q ss_pred             cCCCCEEEeeCCC-CCCCCccccCCCCCcCccCCCCCC----CCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           93 VKERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        93 ~~~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~----~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      |++||||++.+.. .|+.|.+|++|++++|++......    .|...+|                   +|+||+.+|++.
T Consensus        82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~  142 (375)
T PLN02178         82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQG-------------------GYSDVIVVDHRF  142 (375)
T ss_pred             cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCC-------------------ccccEEEEchHH
Confidence            9999999877655 699999999999999998643100    1222344                   999999999999


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHH
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKK  245 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~  245 (373)
                      ++++|+++++++++++++...|+|+++..... .++|++|+|.|+|++|++++|+||.+|+ +|+++++++++ .+.+++
T Consensus       143 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~  221 (375)
T PLN02178        143 VLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDR  221 (375)
T ss_pred             eEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHh
Confidence            99999999999999999999999987644432 3689999999999999999999999999 88888876554 778889


Q ss_pred             cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      +|+++++++.+   .   +.+.+.++ ++|+||||+|....+..++++++++ |+++.+|....  ..+++...++. ++
T Consensus       222 lGa~~~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~  291 (375)
T PLN02178        222 LGADSFLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRK  291 (375)
T ss_pred             CCCcEEEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCe
Confidence            99999998764   2   34445543 7999999999887789999999997 99999997532  35667777666 89


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      ++.|+..+.   .+++.++++++++|++++  +.|+++++++|++.+
T Consensus       292 ~i~g~~~~~---~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~  335 (375)
T PLN02178        292 MVGGSQIGG---MKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRL  335 (375)
T ss_pred             EEEEeCccC---HHHHHHHHHHHHhCCCcccEEEEeHHHHHHHHHHH
Confidence            999986554   578999999999999987  669999999998754

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=8.6e-46  Score=357.77  Aligned_cols=318  Identities=25%  Similarity=0.371  Sum_probs=272.2

Q ss_pred             EEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCCccCCCC
Q 017335           19 AICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERD   97 (373)
Q Consensus        19 ~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   97 (373)
                      +++++++++++++++|.|.|+++||+|||.++|+|++|++.+.+.. +..  .+|.++|||++|+|+++|++++.+ +||
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~-~Gd   78 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH--ALPLALGHEISGRVIQAGAGAASW-IGK   78 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccC--CCCeeccccceEEEEEeCCCcCCC-CCC
Confidence            4567777668999999999999999999999999999999874433 222  578999999999999999999877 999


Q ss_pred             EEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC----
Q 017335           98 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP----  173 (373)
Q Consensus        98 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~----  173 (373)
                      ||++.+..+|+.|.+|+.|.+++|.....   .|...+|                   +|+||+.+|++.++++|+    
T Consensus        79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~  136 (349)
T TIGR03201        79 AVIVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLA  136 (349)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccc
Confidence            99999999999999999999999977543   3444456                   999999999999999999    


Q ss_pred             --CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          174 --HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       174 --~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                        ++++++++.+.+++.|+|+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++
T Consensus       137 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~  214 (349)
T TIGR03201       137 AAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLT  214 (349)
T ss_pred             ccCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceE
Confidence              899999999999999999976 45789999999999999999999999999999 89999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-Ccc----EEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GAD----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS  325 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  325 (373)
                      +++.+...+++.+.+.+++++ ++|    +||||+|....+..++++++++ |+++.+|....  ..+++...++. +.+
T Consensus       215 i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~  291 (349)
T TIGR03201       215 LNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHAR  291 (349)
T ss_pred             ecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccE
Confidence            987652223677788888877 776    8999999988788999999997 99999998543  23566666666 788


Q ss_pred             EEEeecCCCCchhHHHHHHHHHHcCCCCC----CcccccCCCcccccc
Q 017335          326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~~~  369 (373)
                      +.|+....   .++++++++++++|++++    +.|+++++++|++.+
T Consensus       292 ~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~  336 (349)
T TIGR03201       292 ALGNWGCP---PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAA  336 (349)
T ss_pred             EEEEecCC---HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHH
Confidence            88876433   578999999999999964    568999999888654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-45  Score=356.17  Aligned_cols=321  Identities=21%  Similarity=0.317  Sum_probs=267.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.+++. ++++++|.|.| .++||+|||.++++|++|+..+..... .  .+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-H--YYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-C--CCCcccccceEEEEEEeCCCCCCCC
Confidence            79999999876 99999999997 599999999999999999875322111 1  3678999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|++.+...|+.|++|+.|.+++|.+...   .|...+|                   +|++|+.+|++.++++|++
T Consensus        77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~  134 (347)
T PRK10309         77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTD  134 (347)
T ss_pred             CCCEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCC
Confidence            99999999999999999999999999976443   4444556                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++++.+. ++.++|++ .+...++++++|||+|+|++|++++|+|+.+|++.|+++++++++++.++++|+++++++
T Consensus       135 ~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~  212 (347)
T PRK10309        135 MPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNS  212 (347)
T ss_pred             CCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecC
Confidence            9999999875 56677876 466788999999999999999999999999999558999999999999999999999988


Q ss_pred             CCCCCccHHHHHHHhcCC-Ccc-EEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcccc-CHHHHhh-CcEEEEee
Q 017335          255 ATCGDKTVSQVIKEMTDG-GAD-YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK-GRSVCGTY  330 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~-~~~~~~~-~~~i~g~~  330 (373)
                      +.   .+ .+.+.+++.+ ++| ++|||+|...++..++++++++ |+++.+|.......++. +...++. ++++.|+.
T Consensus       213 ~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~  287 (347)
T PRK10309        213 RE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSW  287 (347)
T ss_pred             cc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEe
Confidence            76   44 4566677666 888 9999999987799999999997 99999997543222221 2224454 89999987


Q ss_pred             cCCCC--chhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          331 FGGLK--PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       331 ~~~~~--~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .+...  ..++++++++++++|++++     +.|+++++.+|++.+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~  333 (347)
T PRK10309        288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDL  333 (347)
T ss_pred             ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHH
Confidence            64322  2477899999999999863     678899998888654

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.1e-45  Score=354.16  Aligned_cols=309  Identities=19%  Similarity=0.245  Sum_probs=264.0

Q ss_pred             eEEeecCCC----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           18 AAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        18 a~~~~~~~~----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |+++..++.    .++++++|.|.|+++||+|||.++|||++|++.+.|..+..  .+|.++|||++|+|+++|+++++|
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~   78 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH--RPRVTPGHEVVGEVAGRGADAGGF   78 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC--CCCccCCcceEEEEEEECCCCccc
Confidence            345555542    38999999999999999999999999999999998876543  457899999999999999999999


Q ss_pred             CCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           94 KERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        94 ~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      ++||+|++.+. ..|+.|++|+.|.+++|++...   .|...+|                   +|+||+.+|++.++++|
T Consensus        79 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP  136 (329)
T TIGR02822        79 AVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLP  136 (329)
T ss_pred             CCCCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECC
Confidence            99999987764 4799999999999999988654   4555556                   99999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++++.+++.+.|||+++ ....+++|++|||+|+|++|++++|+|+.+|+ +|++++++++|.++++++|+++++
T Consensus       137 ~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi  214 (329)
T TIGR02822       137 TGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAG  214 (329)
T ss_pred             CCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceec
Confidence            9999999999999999999976 56789999999999999999999999999999 899999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +..+   ..         .+++|+++++.+...++..++++++++ |+++.+|..... ..+++...++. ++++.++..
T Consensus       215 ~~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~  280 (329)
T TIGR02822       215 GAYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTS  280 (329)
T ss_pred             cccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeec
Confidence            7543   11         126899999888777899999999997 999999974332 23566666555 889998864


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      ..   ++++.++++++++|++++  +.|+++++++|++.+
T Consensus       281 ~~---~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~  317 (329)
T TIGR02822       281 NT---RADAREFLELAAQHGVRVTTHTYPLSEADRALRDL  317 (329)
T ss_pred             CC---HHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHH
Confidence            33   578899999999999986  779999999998654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.5e-45  Score=355.27  Aligned_cols=319  Identities=20%  Similarity=0.277  Sum_probs=254.4

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCC-CCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++..++.+++++++|.|+|+++||||||.++|||++|++.+.|.++... ..+|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            68999986544499999999999999999999999999999999988753221 146789999999999999999 8999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      +||||+..+...|++|.+|+.|++++|+...+. ..|.. .+|                   +|+||+.+|++.++++|+
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~G-------------------~~aey~~~~~~~~~~~P~  139 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLHG-------------------FMREYFVDDPEYLVKVPP  139 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCCc-------------------cceeEEEeccccEEECCC
Confidence            999999998889999999999999999875431 12321 234                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHH------HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHH
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWK------VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGK  244 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~------~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~  244 (373)
                      +++ +. +++..++.+++.++..      ...+++|++|||+|+|++|++++|+||.+|+ +|+++++   +++|++.++
T Consensus       140 ~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~  216 (355)
T cd08230         140 SLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE  216 (355)
T ss_pred             CCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence            998 44 4444466665544322      2236789999999999999999999999999 8999987   688999999


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccC----HHHH
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN----SIEI  320 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~----~~~~  320 (373)
                      ++|++. +++++   .++.+ ..  ..+++|+||||+|....++.+++.++++ |+++.+|.......++++    ...+
T Consensus       217 ~~Ga~~-v~~~~---~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~  288 (355)
T cd08230         217 ELGATY-VNSSK---TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDL  288 (355)
T ss_pred             HcCCEE-ecCCc---cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhH
Confidence            999987 46554   44433 21  2248999999999887789999999997 999999985442344555    2344


Q ss_pred             hh-CcEEEEeecCCCCchhHHHHHHHHHHcCC------CC---CCcccccCCCcccccc
Q 017335          321 LK-GRSVCGTYFGGLKPRSDIATLAQKYLDKV------HL---RSSFHLCDPNSDSAGL  369 (373)
Q Consensus       321 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~------i~---~~~~~~~~~~~a~~~~  369 (373)
                      +. ++++.|+..+.   .++++++++++.+++      +.   .+.|+++++.+|++.+
T Consensus       289 ~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~  344 (355)
T cd08230         289 VLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEK  344 (355)
T ss_pred             hhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhc
Confidence            54 89999986443   577899999999877      22   3789999999988754

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.9e-45  Score=352.51  Aligned_cols=322  Identities=22%  Similarity=0.317  Sum_probs=270.7

Q ss_pred             ccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      .++++|++++.+++++++++++.|+|+++||+|||.+++||++|++.+.|..+..  .+|.++|||++|+|+++|+++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~Vv~vG~~v~~   84 (357)
T PLN02514          7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS--NYPMVPGHEVVGEVVEVGSDVSK   84 (357)
T ss_pred             CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC--CCCccCCceeeEEEEEECCCccc
Confidence            4568999999999889999999999999999999999999999999988865443  57889999999999999999999


Q ss_pred             cCCCCEEEeeCCC-CCCCCccccCCCCCcCccCCCCC----CCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           93 VKERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        93 ~~~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      |++||+|++.+.. .|+.|..|+.|.+++|.+....+    ..|...+|                   +|+||+.+|.+.
T Consensus        85 ~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~  145 (357)
T PLN02514         85 FTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQG-------------------GFASAMVVDQKF  145 (357)
T ss_pred             ccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCC-------------------ccccEEEEchHH
Confidence            9999999876543 69999999999999998753211    11222234                   999999999999


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF  246 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~l  246 (373)
                      ++++|+++++++++.+++.+.|||+++......++|++|+|+|+|++|++++|+||.+|+ +|++++++++++..+ +++
T Consensus       146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~  224 (357)
T PLN02514        146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL  224 (357)
T ss_pred             eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence            999999999999999999999999977655556899999999989999999999999999 788888887776555 569


Q ss_pred             CCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335          247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS  325 (373)
Q Consensus       247 ga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  325 (373)
                      |+++++++.+   .   +.+.+.+. ++|++|||+|...+++.++++++++ |+++.+|....  ..+++...++. +++
T Consensus       225 Ga~~~i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~  294 (357)
T PLN02514        225 GADDYLVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKV  294 (357)
T ss_pred             CCcEEecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcE
Confidence            9998887654   2   23444443 7999999999877799999999997 99999997532  34666666666 899


Q ss_pred             EEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      +.|+..+.   ..++.++++++++|++++  +.|+++++.+|++.+
T Consensus       295 i~g~~~~~---~~~~~~~~~~~~~g~l~~~i~~~~l~~~~~A~~~~  337 (357)
T PLN02514        295 ITGSFIGS---MKETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERL  337 (357)
T ss_pred             EEEEecCC---HHHHHHHHHHHHhCCCcCcEEEEcHHHHHHHHHHH
Confidence            99997655   578999999999999875  779999999988764

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=4.4e-44  Score=348.82  Aligned_cols=351  Identities=46%  Similarity=0.729  Sum_probs=283.0

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      +..+|||+++..++++++++++|.|+|.++||+|||.++|||++|++.+.|... .  .+|.++|||++|+|+++|++++
T Consensus         4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~   80 (373)
T cd08299           4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-T--PFPVILGHEAAGIVESVGEGVT   80 (373)
T ss_pred             ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-C--CCCccccccceEEEEEeCCCCc
Confidence            456799999998877799999999999999999999999999999999988753 2  5788999999999999999999


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      .+++||+|++.+..+|+.|.+|+.+.++.|+.....-..|+..+|..++..+ |.+.+++...|+|+||+.++++.++++
T Consensus        81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~e~~~v~~~~~~~l  159 (373)
T cd08299          81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCK-GKPIHHFLGTSTFSEYTVVDEIAVAKI  159 (373)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccC-CcccccccCCCcccceEEecccceeeC
Confidence            9999999999998999999999999999998754310012211111111100 122233333569999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      |+++++++++++++++.+||+++.+...++++++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++
T Consensus       160 P~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~  239 (373)
T cd08299         160 DAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATEC  239 (373)
T ss_pred             CCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE
Confidence            99999999999999999999988888899999999999889999999999999998679999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHh-ccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335          252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY  330 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  330 (373)
                      ++..+ ...++.+.+.+++++++|+++||+|++..+..++..+ +++ |+++.+|.......++++...+..+.++.++.
T Consensus       240 i~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~  317 (373)
T cd08299         240 INPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAV  317 (373)
T ss_pred             ecccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEE
Confidence            98765 1123667777776668999999999866677767765 576 99999997543334556554444588999988


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      .+.+...+++.++++++.++.+++     +.|+++++.++++.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~  360 (373)
T cd08299         318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDL  360 (373)
T ss_pred             ecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHH
Confidence            777665677888888888876543     66888888777654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=4.5e-44  Score=347.85  Aligned_cols=346  Identities=33%  Similarity=0.610  Sum_probs=287.8

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |+|||+++.++++++++++.+.|++.++||+|||.++++|++|+....+..+ .  .+|.++|||++|+|+++|++++++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~   77 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-T--PLPAVLGHEGAGVVEAVGSAVTGL   77 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccC
Confidence            5799999999776789999999999999999999999999999999888654 2  578899999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceec-ccccccceeeeEEeeccceEEcC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~-~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      ++||+|++.+. .|++|.+|+.+..++|.........|...+|.-.++.+.+++.+ +++..|+|++|+.++++.++++|
T Consensus        78 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP  156 (365)
T cd08278          78 KPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD  156 (365)
T ss_pred             CCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence            99999998764 89999999999999998655332334444443222223333322 23345799999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++++.+++.+.||+.++.+...++++++|||+|+|++|++++++|+.+|+++|+++++++++.+.++++|+++++
T Consensus       157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i  236 (365)
T cd08278         157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVI  236 (365)
T ss_pred             CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence            99999999999999999999888888899999999998899999999999999997799999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +++.   .++.+.+.+.+++++|+++||+|....+..++++++++ |+++.+|..+......++...++. +.++.++..
T Consensus       237 ~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (365)
T cd08278         237 NPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIE  312 (365)
T ss_pred             cCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeec
Confidence            9876   67888888877339999999999877799999999997 999999975333344667766644 899988765


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC----CcccccCCCcccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSA  367 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~  367 (373)
                      ......+.+.+++++++++++.+    ..|+++++.+++.
T Consensus       313 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~  352 (365)
T cd08278         313 GDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIA  352 (365)
T ss_pred             CCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHH
Confidence            54444567889999999998854    4578888877764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=3.9e-44  Score=346.30  Aligned_cols=320  Identities=28%  Similarity=0.428  Sum_probs=275.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-C--------CCCCCccccCcccEEEEEe
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-P--------KLPLPVIFGHEAVGVVESV   86 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~--------~~~~p~~~G~e~~G~V~~v   86 (373)
                      |||+++.+++. ++++++|.|+|+++||+||+.++++|++|+..+.+.... .        ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            79999998876 999999999999999999999999999998866533210 0        0136889999999999999


Q ss_pred             CCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeec
Q 017335           87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        87 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      |+++++|++||+|+..+..+|++|.+|+.+.+++|.....   .|+. .+|                   +|++|+.++.
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~a~~~~~~~  137 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGGG-------------------GFAEYVVVPA  137 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCCC-------------------ceeeEEEech
Confidence            9999999999999999989999999999999999986543   3332 245                   9999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      ..++++|+++++++++.+ .++.|||.++ ....++++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus       138 ~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~  215 (351)
T cd08233         138 YHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE  215 (351)
T ss_pred             HHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            999999999999999876 5888999976 78889999999999999999999999999999789999999999999999


Q ss_pred             cCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-C
Q 017335          246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-G  323 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~  323 (373)
                      +|+++++++++   .++.+.+.+.+++ ++|++||++|....+..++++++++ |+++.+|...  ...+++...+.. +
T Consensus       216 ~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~  289 (351)
T cd08233         216 LGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKE  289 (351)
T ss_pred             hCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhC
Confidence            99999999887   7888888888877 7999999999877799999999997 9999999854  345677776666 8


Q ss_pred             cEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCC-Ccccccc
Q 017335          324 RSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDP-NSDSAGL  369 (373)
Q Consensus       324 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~-~~a~~~~  369 (373)
                      +++.|+....   .++++++++++++|++++     +.|+++++ ++|++.+
T Consensus       290 ~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~  338 (351)
T cd08233         290 KTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEEL  338 (351)
T ss_pred             cEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHH
Confidence            9999986443   478999999999999954     57888885 5676543

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.1e-43  Score=344.35  Aligned_cols=331  Identities=24%  Similarity=0.373  Sum_probs=275.1

Q ss_pred             eeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc----
Q 017335           17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE----   92 (373)
Q Consensus        17 ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~----   92 (373)
                      ||+++.++++.+++++++.|.|+++||+|||.++++|++|+..+.|..+..  .+|.++|||++|+|+++|+++++    
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~~   79 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTTDVAG   79 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCC--CCCcccccCCceEEEEeCCCccccccC
Confidence            799999988669999999999999999999999999999999988876533  67889999999999999999986    


Q ss_pred             --cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCC-CCccccccCCceecccccccceeeeEEeecc-ce
Q 017335           93 --VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HV  168 (373)
Q Consensus        93 --~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~-G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~  168 (373)
                        |++||+|++.+...|+.|.+|+.+.++.|++..+   .|...+ |.             ....|+|++|+.++++ .+
T Consensus        80 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~  143 (361)
T cd08231          80 EPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAI  143 (361)
T ss_pred             CccCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCce
Confidence              9999999999999999999999999999988664   232211 00             0012499999999986 79


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +++|++++++++++++++++|||.++.+....+++++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|+
T Consensus       144 ~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~  223 (361)
T cd08231         144 VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGA  223 (361)
T ss_pred             EECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence            99999999999999988999999988666666799999999999999999999999999789999999999999999999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE
Q 017335          249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV  326 (373)
Q Consensus       249 ~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  326 (373)
                      +++++.+.....++...+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|........+++...++. ++++
T Consensus       224 ~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  302 (361)
T cd08231         224 DATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTI  302 (361)
T ss_pred             CeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEE
Confidence            999988752112233567777776 8999999999877789999999997 999999975433344566655555 8999


Q ss_pred             EEeecCCCCchhHHHHHHHHHHcC--CCCC-----CcccccCCCcccccc
Q 017335          327 CGTYFGGLKPRSDIATLAQKYLDK--VHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~~~~~~~~~~~~~~~~~~~~~g--~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .++..+.   .+++.++++++.++  .+.+     +.|+++++.+|++.+
T Consensus       303 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~  349 (361)
T cd08231         303 IGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELA  349 (361)
T ss_pred             EEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHH
Confidence            9886543   56788999999887  4432     668888888887543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.1e-43  Score=343.17  Aligned_cols=347  Identities=45%  Similarity=0.769  Sum_probs=289.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      +||+++.+.++++++++++.|.+++++|+||+.++++|++|++.+.+....   .+|.++|||++|+|+++|++++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~---~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT---PLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC---CCCcccccceeEEEEEeCCCcccCCC
Confidence            579999988777999999999999999999999999999999988876542   46789999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|++.+...|++|.+|+.+.+++|+...+.-+.|...+|...|-- +|-+.+++.+.|+|++|+.++++.++++|+++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~  156 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDA  156 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCC
Confidence            99999999899999999999999999876643223332233222211 22233445556799999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++.+.+++.+||.++.+...++++++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++++..
T Consensus       157 ~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  236 (365)
T cd05279         157 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR  236 (365)
T ss_pred             CHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence            99999999999999999888888999999999998899999999999999996688888899999999999999999887


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhc-cCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL  334 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (373)
                      . .+.++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|........+++...+.++.+++|+..+.+
T Consensus       237 ~-~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  314 (365)
T cd05279         237 D-QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGW  314 (365)
T ss_pred             c-ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCC
Confidence            6 11167777888775589999999998677999999999 97 999999875433456777777744888999877766


Q ss_pred             CchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          335 KPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       335 ~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      ...+.+.+++++++++++++     +.|+++++.+|++.
T Consensus       315 ~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~  353 (365)
T cd05279         315 KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDL  353 (365)
T ss_pred             chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHH
Confidence            66788999999999998864     55777777777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.4e-42  Score=333.06  Aligned_cols=316  Identities=24%  Similarity=0.367  Sum_probs=274.3

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++..++++++++++|.|+++++||+||+.++++|++|+..+.|..+..  .+|.++|||++|+|+++|++++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~vG~~v~~~~~   78 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SYPRVPGHEVVGRIDAVGEGVSRWKV   78 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC--CCCcccCcceeEEEEEECCCCccCCC
Confidence            7999999986569999999999999999999999999999999988865433  56889999999999999999999999


Q ss_pred             CCEEEeeC-CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        96 Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      ||+|++.+ ...|++|.+|..|.++.|.....   .|+..+|                   +|++|+.++.+.++++|++
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~  136 (333)
T cd08296          79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDD  136 (333)
T ss_pred             CCEEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCC
Confidence            99998755 46799999999999999987664   4554455                   8999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++++.+++.+.+||.++. ...++++++|||+|+|++|++++++|+.+|+ +|+++++++++++.++++|+++++++
T Consensus       137 ~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~  214 (333)
T cd08296         137 LDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDT  214 (333)
T ss_pred             CCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecC
Confidence            999999999999999999764 4589999999999999999999999999999 89999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      ..   .++...+.+.  +++|+++|+.|....+..++++++++ |+++.+|...  ..++++...++. ++++.++..+.
T Consensus       215 ~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~  286 (333)
T cd08296         215 SK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT  286 (333)
T ss_pred             CC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC
Confidence            76   6677666665  37999999998666799999999997 9999999754  345667666556 99999986443


Q ss_pred             CCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                         ..++.++++++++++++.  +.|+++++.+|+..
T Consensus       287 ---~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~a~~~  320 (333)
T cd08296         287 ---ALDSEDTLKFSALHGVRPMVETFPLEKANEAYDR  320 (333)
T ss_pred             ---HHHHHHHHHHHHhCCCCceEEEEEHHHHHHHHHH
Confidence               577889999999998875  77899999888754

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.6e-42  Score=334.99  Aligned_cols=325  Identities=25%  Similarity=0.278  Sum_probs=271.9

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++. +++++.+.|.++++||+|||.++++|++|++.+.+.....  .+|.++|||++|+|+++|+.++++++
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGE--RHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCC--CCCcccCcceEEEEEEecCCcCccCC
Confidence            79999999886 8999999999999999999999999999999887765443  56889999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP  173 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP~  173 (373)
                      ||+|+..+...|++|..|..|.++.|.........+...+|                   +|++|+.+|.+  .++++|+
T Consensus        78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g-------------------~~~~y~~v~~~~~~~~~lP~  138 (351)
T cd08285          78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDG-------------------VFAEYFHVNDADANLAPLPD  138 (351)
T ss_pred             CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCc-------------------ceeEEEEcchhhCceEECCC
Confidence            99999988889999999999999999864321011222334                   99999999974  8999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++++.++..+.|||++ .+...++++++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|++++++
T Consensus       139 ~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~  217 (351)
T cd08285         139 GLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD  217 (351)
T ss_pred             CCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEec
Confidence            99999999999899999997 47788999999999988999999999999999967999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH--hh-CcEEEEe
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI--LK-GRSVCGT  329 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~--~~-~~~i~g~  329 (373)
                      ++.   .++.+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|.......++++...+  .. ..++.+.
T Consensus       218 ~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~  293 (351)
T cd08285         218 YKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGG  293 (351)
T ss_pred             CCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEe
Confidence            877   6788888888766 8999999999877789999999997 9999999765433344443222  22 5666655


Q ss_pred             ecCCCCchhHHHHHHHHHHcCCCCC------CcccccCCCcccccc
Q 017335          330 YFGGLKPRSDIATLAQKYLDKVHLR------SSFHLCDPNSDSAGL  369 (373)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~g~i~~------~~~~~~~~~~a~~~~  369 (373)
                      ....  ..++++++++++++|++++      +.++++++.+|+..+
T Consensus       294 ~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~  337 (351)
T cd08285         294 LCPG--GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLM  337 (351)
T ss_pred             ecCC--ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHH
Confidence            3221  2467999999999999886      237888888877543

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.2e-43  Score=307.96  Aligned_cols=301  Identities=25%  Similarity=0.263  Sum_probs=263.4

Q ss_pred             CcccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           11 GKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      ..|+..|.+++++.|..  +++++.|.|+|+|+|++||..|+|+|.-|..+.+|-+...  ..|++||-|++|+|+++|+
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~--plPytpGmEaaGvVvAvG~   81 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPA--PLPYTPGMEAAGVVVAVGE   81 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCC--CCCcCCCcccceEEEEecC
Confidence            46778899999988764  8999999999999999999999999999999999998644  7999999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +|+++++||||+..-                              +.                   |.|+|++.+|...+
T Consensus        82 gvtdrkvGDrVayl~------------------------------~~-------------------g~yaee~~vP~~kv  112 (336)
T KOG1197|consen   82 GVTDRKVGDRVAYLN------------------------------PF-------------------GAYAEEVTVPSVKV  112 (336)
T ss_pred             CccccccccEEEEec------------------------------cc-------------------hhhheeccccceee
Confidence            999999999997532                              22                   38999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      .++|+.+++.+||++....+|||..+++...+++|++|||+.+ |++|+++.|++|..|+ ++|++.++++|.+.+++-|
T Consensus       113 ~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG  191 (336)
T KOG1197|consen  113 FKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENG  191 (336)
T ss_pred             ccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcC
Confidence            9999999999999999999999998899999999999999976 9999999999999999 9999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS  325 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  325 (373)
                      ++|.|+++.   +|+.+++.++|++ |+|+++|.+|... +...+.+|++. |+++.+|.. ++..-+++...+.- ++.
T Consensus       192 ~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~a-sgl~~p~~l~~ls~k~l~  265 (336)
T KOG1197|consen  192 AEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNA-SGLIDPIPLNQLSPKALQ  265 (336)
T ss_pred             Ccceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEeccc-cCCCCCeehhhcChhhhh
Confidence            999999999   9999999999988 9999999999877 99999999997 999999984 44444555555444 554


Q ss_pred             EEE-eecCCCCchh----HHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          326 VCG-TYFGGLKPRS----DIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       326 i~g-~~~~~~~~~~----~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      +.. +.++-....+    ...++..++.+|.|++   +.||++++.+|.+++
T Consensus       266 lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~di  317 (336)
T KOG1197|consen  266 LVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADI  317 (336)
T ss_pred             hccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHH
Confidence            432 3333333233    3567888899999997   899999999998765

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.2e-42  Score=334.82  Aligned_cols=298  Identities=19%  Similarity=0.235  Sum_probs=237.6

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC--CCCCCccccCcccEEEEEeCCCCCc
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--KLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      .-++++++++++ ++++++|.|+ +++||||||.++|||++|++.+.|.+...  ...+|.++|||++|+|+++|..  +
T Consensus         2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            357899999987 9999999995 99999999999999999999998865321  0157999999999999998864  6


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      |++||||++.+...|+ |..|  +..++|.+..+   .|...+|                   +|+||+.+|+++++++|
T Consensus        78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~vP  132 (341)
T cd08237          78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKLP  132 (341)
T ss_pred             cCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEECC
Confidence            9999999998887787 4455  45678876543   3433455                   99999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHH--hCCCCCCEEEEECCChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~--~~~~~~~~VlI~G~G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      +++++++|+++. +++++|+++.+.  ..+++|++|||+|+|++|++++|+++. +|..+|++++++++|++.+++.+++
T Consensus       133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~  211 (341)
T cd08237         133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET  211 (341)
T ss_pred             CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence            999999887665 888999876442  356899999999999999999999986 6655899999999999999886665


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCC---HHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      +.++       +       ...+ ++|+|||++|+   +.++..++++++++ |+++.+|...  ...+++...++. ++
T Consensus       212 ~~~~-------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~  274 (341)
T cd08237         212 YLID-------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKGL  274 (341)
T ss_pred             eehh-------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCce
Confidence            3321       1       1122 79999999994   45689999999997 9999999743  245667666665 99


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcC-C----CC---CCcccccCC
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDK-V----HL---RSSFHLCDP  362 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g-~----i~---~~~~~~~~~  362 (373)
                      ++.|+..+.   .+++++++++++++ +    +.   .+.|+++++
T Consensus       275 ~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l  317 (341)
T cd08237         275 TLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSI  317 (341)
T ss_pred             EEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccH
Confidence            999986433   57899999999999 2    22   266777543

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.1e-41  Score=327.36  Aligned_cols=314  Identities=22%  Similarity=0.350  Sum_probs=264.8

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++. +++++++.|+|+++|++||+.+++||++|+..+.|..+..  .+|.++|||++|+|+++|++|+.+++
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA--KYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC--CCCcccccceEEEEEEECCCCccCCC
Confidence            78999999886 9999999999999999999999999999999888875543  57899999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|++.+..+|+.|.+|..+++++|.....   .++..+|                   +|++|+.++.+.++++|+++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~ip~~~  135 (339)
T PRK10083         78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG-------------------GFSEYAVVPAKNAHRIPDAI  135 (339)
T ss_pred             CCEEEEccccCCCCCccccCcCcccCCCCce---EEEccCC-------------------cceeeEEechHHeEECcCCC
Confidence            9999999999999999999999999976543   3443445                   89999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++.++ +..++.++|. +.+..+++++++|+|+|+|++|++++|+|+. +|+..|+++++++++.+.++++|+++++++
T Consensus       136 ~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~  213 (339)
T PRK10083        136 ADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINN  213 (339)
T ss_pred             CHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence            998876 4457888886 6678899999999999999999999999996 699678889999999999999999999998


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      ++   .++.+.+..  .+ ++|++||++|+...+..++++++++ |+++.+|....  ...++...+.. ++++.++.. 
T Consensus       214 ~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~-  284 (339)
T PRK10083        214 AQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL-  284 (339)
T ss_pred             cc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec-
Confidence            76   566666643  23 5789999999876799999999997 99999997532  23344444444 778777643 


Q ss_pred             CCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          333 GLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                         ..+.+.++++++++|++++     +.|++++++++++.
T Consensus       285 ---~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~  322 (339)
T PRK10083        285 ---NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIEL  322 (339)
T ss_pred             ---ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHH
Confidence               2467999999999998875     66788888777654

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1e-41  Score=336.21  Aligned_cols=315  Identities=21%  Similarity=0.241  Sum_probs=253.9

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcc-cCCCC-C---CCCCCCccccCcccEEEEEeCC
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTD-L---PKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~-~---~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      |+|||+++.+++. ++++++|.|+|+++||+|||.++|||++|++.+ .|... .   ....+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            5799999999987 999999999999999999999999999999976 44321 1   0014788999999999999999


Q ss_pred             CCC-ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc-
Q 017335           89 YVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT-  166 (373)
Q Consensus        89 ~v~-~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-  166 (373)
                      +|+ +|++||||++.+...|+.|..|..              .|...+|                   +|+||+.+|++ 
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G-------------------~~aey~~v~~~~  126 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG-------------------GLATYHIIPNEV  126 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC-------------------cceEEEEecHHh
Confidence            998 599999999999888998887731              2333455                   99999999987 


Q ss_pred             ---ceEEcCCCCChhhhhccchhhh---hHHHHH--------HHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCC--CCe
Q 017335          167 ---HVVKITPHIPLGIACLLSCGVS---TGVGAA--------WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNR--ASK  229 (373)
Q Consensus       167 ---~~~~lP~~l~~~~aa~l~~~~~---ta~~~~--------~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G--~~~  229 (373)
                         .++++|+++++++++++. ++.   +++.++        .++..+++|++|+|+|+ |++|++++|+|+.+|  +.+
T Consensus       127 ~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~  205 (410)
T cd08238         127 MEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSL  205 (410)
T ss_pred             ccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCce
Confidence               689999999999998653 222   233322        24577899999999985 999999999999975  457


Q ss_pred             EEEEcCChhHHHHHHHc--------CCc-eEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCc
Q 017335          230 IIGVDINPEKFEIGKKF--------GIT-DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWG  299 (373)
Q Consensus       230 Vi~~~~~~~~~~~~~~l--------ga~-~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G  299 (373)
                      |++++++++|++.++++        |++ +++++++  ..++.+.+++++++ ++|++||++|....++.++++++++ |
T Consensus       206 Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G  282 (410)
T cd08238         206 LVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-G  282 (410)
T ss_pred             EEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-C
Confidence            99999999999999997        776 5677653  14677888888887 8999999999888899999999997 8


Q ss_pred             eEEEEcccCC-CCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          300 KTVILGVEMH-GSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       300 ~~v~~G~~~~-~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +++.++.... ....+++...++. +++++|+..+.   .++++++++++++|++++     +.|+++++++|++.+
T Consensus       283 ~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~  356 (410)
T cd08238         283 CLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNL  356 (410)
T ss_pred             eEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHh
Confidence            8877654222 2234677767666 99999986443   578999999999999986     678899988887765

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.1e-41  Score=325.44  Aligned_cols=319  Identities=28%  Similarity=0.416  Sum_probs=276.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.++++++++.+.+.|++++++|+||+.++++|++|+....|.... ....+|.++|||++|+|+++|+++++++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            799999988667999999999999999999999999999999988776542 1126788999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+..+...|+.|..|..|.+++|++..+   .|+..+|                   +|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~  138 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG  138 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence            99999999999999999999999999998886   5666667                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHH-hCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++.++..+.|||.++... ..+.++++|||+|+|++|++++++|+.+| . +|+++++++++.+.++++|+++++
T Consensus       139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~  217 (340)
T cd05284         139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL  217 (340)
T ss_pred             CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence            99999999999999999987665 46889999999999889999999999999 6 899999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~  330 (373)
                      +++.   . +.+++.+++++ ++|+++|++|+...+..++++++++ |+++.+|....   .+++...++ +++++.++.
T Consensus       218 ~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~  289 (340)
T cd05284         218 NASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSL  289 (340)
T ss_pred             cCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEe
Confidence            9886   5 77888888776 8999999999866699999999997 99999997532   344444433 488988875


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                      ...   .+.+.+++++++++++.+  +.|+++++.++++.
T Consensus       290 ~~~---~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~a~~~  326 (340)
T cd05284         290 WGT---RAELVEVVALAESGKVKVEITKFPLEDANEALDR  326 (340)
T ss_pred             ccc---HHHHHHHHHHHHhCCCCcceEEEeHHHHHHHHHH
Confidence            443   577899999999998864  66788887777654

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-41  Score=325.85  Aligned_cols=318  Identities=27%  Similarity=0.378  Sum_probs=268.2

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC------C-CCCCccccCcccEEEEEeCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP------K-LPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~------~-~~~p~~~G~e~~G~V~~vG~   88 (373)
                      |||+++.+++. +++++.+.|++.+++|+||+.+++||++|+..+.|.....      . ..+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            79999999887 9999999999999999999999999999999887753110      0 03577899999999999999


Q ss_pred             CCC--ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC--CCCCccccccCCceecccccccceeeeEEee
Q 017335           89 YVE--EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP--RDGTSRFRELKGDVIHHFLNISSFTEYSVVD  164 (373)
Q Consensus        89 ~v~--~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~--~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  164 (373)
                      .++  +|++||+|+..+..+|+.|+.|+.|.+++|.....   .|+.  .+|                   +|++|+.++
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~g-------------------~~~~~~~~~  137 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNNVNG-------------------GMAEYMRFP  137 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccCCCC-------------------cceeeEEcc
Confidence            999  89999999999999999999999999999975432   3332  344                   999999999


Q ss_pred             cc-ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          165 IT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       165 ~~-~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      ++ .++++|+++++++++.+ .+++|+|.++ +...++++++|+|.|+|++|++++++|+.+|+..|+++++++++.+.+
T Consensus       138 ~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  215 (350)
T cd08256         138 KEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA  215 (350)
T ss_pred             cccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH
Confidence            88 67899999999999988 7999999976 788899999999977899999999999999986788899999999999


Q ss_pred             HHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH--
Q 017335          244 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI--  320 (373)
Q Consensus       244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~--  320 (373)
                      +++|++++++.+.   .++.+.+.+++++ ++|++||++|....+..++++++++ |+++.+|.....  .+++...+  
T Consensus       216 ~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~  289 (350)
T cd08256         216 RKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGD  289 (350)
T ss_pred             HHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhc
Confidence            9999999998876   7788888888877 8999999999766688999999997 999999875432  33444333  


Q ss_pred             hhCcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      .+++++.++....    ..+.++++++++|.+++     +.|+++++.+++..
T Consensus       290 ~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~  338 (350)
T cd08256         290 RKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFEL  338 (350)
T ss_pred             ccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHH
Confidence            2378888875443    46889999999998875     55788888877654

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=7e-41  Score=325.18  Aligned_cols=345  Identities=38%  Similarity=0.644  Sum_probs=284.4

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++..++.++++++++.|++++++|+|||.++++|+.|+..+.+..+.   .+|.++|||++|+|+++|++++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~   77 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA---PLPAVLGHEGAGVVEEVGPGVTGVKP   77 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC---CCCccccccceEEEEEeCCCccccCC
Confidence            799999998777999999999999999999999999999999988876542   56789999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|+..+...|++|.+|+.++.+.|+..... -+|...+|+.++ ..-|.....++..|+|++|+.++++.++++|+++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~  155 (363)
T cd08279          78 GDHVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRF-TADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI  155 (363)
T ss_pred             CCEEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCcccc-cccCccccccccCccceeeEEeccccEEECCCCC
Confidence            99999999999999999999999999764310 011111111111 0001111112234599999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++.+++.+.+||.++.+...++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.+
T Consensus       156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~  235 (363)
T cd08279         156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS  235 (363)
T ss_pred             ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence            99999999999999999888888899999999998899999999999999995599999999999999999999999887


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      .   .++...+.+++++ ++|+++|++++...+..++++++++ |+++.+|.........++...+.. +.++.++.++.
T Consensus       236 ~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (363)
T cd08279         236 E---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS  311 (363)
T ss_pred             C---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence            7   6788888888765 8999999999777689999999997 999999875433455667776665 78888876655


Q ss_pred             CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ....+.+++++++++++++++     +.|+++++.++++.+
T Consensus       312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~  352 (363)
T cd08279         312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADM  352 (363)
T ss_pred             cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHH
Confidence            445688999999999999874     457888888776553

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.4e-40  Score=326.44  Aligned_cols=333  Identities=18%  Similarity=0.163  Sum_probs=273.2

Q ss_pred             CCCCCcccceeeEEeecC--C---CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC--------CCCCCc
Q 017335            7 SPKAGKVIRCKAAICRIP--G---KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--------KLPLPV   73 (373)
Q Consensus         7 ~~~~~~~~~~ka~~~~~~--~---~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~--------~~~~p~   73 (373)
                      .|.+-.|.+|||+++..+  +   +.++++++|.|.++++||+||+.+++||++|++.+.+.....        ....+.
T Consensus         4 ~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~   83 (393)
T cd08246           4 PPLGVVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH   83 (393)
T ss_pred             CCCCcCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence            355668999999998632  2   237899999999999999999999999999998877652100        001235


Q ss_pred             cccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccc
Q 017335           74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFL  152 (373)
Q Consensus        74 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~  152 (373)
                      ++|||++|+|+++|++++.+++||+|++.+...|++|..|..+.+++|.....   +|+. .+|                
T Consensus        84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~g----------------  144 (393)
T cd08246          84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNYG----------------  144 (393)
T ss_pred             ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCCC----------------
Confidence            89999999999999999999999999999999999999999999999986543   4432 234                


Q ss_pred             cccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHH--hCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCe
Q 017335          153 NISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASK  229 (373)
Q Consensus       153 ~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~--~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~  229 (373)
                         +|++|+.++...++++|+++++++++.+.+++.|||+++...  ..++++++|+|+|+ |++|++++++|+.+|+ +
T Consensus       145 ---~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~  220 (393)
T cd08246         145 ---SFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-N  220 (393)
T ss_pred             ---cceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-e
Confidence               999999999999999999999999999999999999987654  67899999999998 9999999999999999 7


Q ss_pred             EEEEcCChhHHHHHHHcCCceEEcCCCCC-------------------CccHHHHHHHhcCC--CccEEEECCCCHHHHH
Q 017335          230 IIGVDINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG--GADYCFECIGLTSVMN  288 (373)
Q Consensus       230 Vi~~~~~~~~~~~~~~lga~~vi~~~~~~-------------------~~~~~~~i~~~~~~--~~d~vid~~g~~~~~~  288 (373)
                      ++++++++++.+.++++|++++++.++..                   ...+.+.+.+++++  ++|++||++|+.. ++
T Consensus       221 vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~  299 (393)
T cd08246         221 PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FP  299 (393)
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HH
Confidence            88889999999999999999999875410                   01356777788776  6999999999754 89


Q ss_pred             HHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCc
Q 017335          289 DAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNS  364 (373)
Q Consensus       289 ~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~  364 (373)
                      .++++++++ |+++.+|.... ...+++...+.. +.++.++....   .+++.+++++++++.+.+   +.|+++++++
T Consensus       300 ~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~  374 (393)
T cd08246         300 TSVFVCDRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDPCLSKVFSLDETPD  374 (393)
T ss_pred             HHHHHhccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCceeeeeEEEeHHHHHH
Confidence            999999997 99999987432 234455555555 88888886544   467889999999998864   6788888887


Q ss_pred             cccc
Q 017335          365 DSAG  368 (373)
Q Consensus       365 a~~~  368 (373)
                      ++..
T Consensus       375 a~~~  378 (393)
T cd08246         375 AHQL  378 (393)
T ss_pred             HHHH
Confidence            7654

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.3e-40  Score=324.16  Aligned_cols=335  Identities=25%  Similarity=0.336  Sum_probs=271.2

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.++++ +++++++.|.|. +++|+||+.+++||++|+..+.|.++..  .+|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM--KKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC--CCCccccccceEEEEEeCCCCCCCC
Confidence            79999998866 999999999884 9999999999999999999998876554  5788999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCC-CCC---CCCCCCccccccCCceecccccccceeeeEEeecc--ce
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY-RPN---MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HV  168 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g---~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~  168 (373)
                      +||+|++.+...|++|.+|+.+.+++|++..... ..+   ....|..++     ... .....|+|++|+.++.+  .+
T Consensus        78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~g~~~~~~~v~~~~~~~  151 (386)
T cd08283          78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGY-----SHL-TGGYAGGQAEYVRVPFADVGP  151 (386)
T ss_pred             CCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccccccc-----ccc-cCCCCCeeEEEEEcccccCeE
Confidence            9999999999999999999999999998754320 000   000000000     000 00013599999999988  89


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +++|+++++++++.++..++|||+++ +...++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.+++++.
T Consensus       152 ~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~  230 (386)
T cd08283         152 FKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG  230 (386)
T ss_pred             EECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence            99999999999999999999999987 88889999999999889999999999999998569999999999999999854


Q ss_pred             ceEEcCCCCCCc-cHHHHHHHhcCC-CccEEEECCCCH---------------------HHHHHHHHHhccCCceEEEEc
Q 017335          249 TDFINPATCGDK-TVSQVIKEMTDG-GADYCFECIGLT---------------------SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       249 ~~vi~~~~~~~~-~~~~~i~~~~~~-~~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..+++...   . ++.+.+.+++++ ++|++||++|+.                     ..+..++++++++ |+++.+|
T Consensus       231 ~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g  306 (386)
T cd08283         231 AETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIG  306 (386)
T ss_pred             cEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEc
Confidence            46887765   4 488888888877 899999999753                     3588899999997 9999999


Q ss_pred             ccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          306 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       306 ~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      ..... ...++....+. ++++.++...   ..+.+.+++++++++++.+     +.|+++++.++++.
T Consensus       307 ~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~  371 (386)
T cd08283         307 VYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKI  371 (386)
T ss_pred             CCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHH
Confidence            75432 33455534444 8888887432   2577999999999999975     55788888777653

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.5e-40  Score=320.25  Aligned_cols=323  Identities=31%  Similarity=0.420  Sum_probs=270.3

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.+++. +++.+.|.|.| +++||+|||.++++|++|+..+.+.++..  .+|.++|||++|+|+++|+++++++
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGA--KHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCC--CCCceeccceEEEEEEECCCccccC
Confidence            68999999877 89999999999 89999999999999999999988876654  6789999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT  172 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP  172 (373)
                      +||+|+..+...|+.|.+|..|.+.+|+.....-..+...+|                   +|++|++++.+  .++++|
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP  138 (347)
T cd05278          78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDG-------------------GQAEYVRVPYADMNLAKIP  138 (347)
T ss_pred             CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCC-------------------eeeEEEEecchhCeEEECC
Confidence            999999999999999999999999999875532111222234                   99999999987  999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++++.++..+.|||+++ ....++++++|||.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|+++++
T Consensus       139 ~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi  217 (347)
T cd05278         139 DGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDII  217 (347)
T ss_pred             CCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEE
Confidence            9999999999999999999976 778899999999988899999999999999965789998899999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeec
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF  331 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (373)
                      +++.   .++.+.+...+++ ++|++||++++...+..++++++++ |+++.+|..............+.+++++.++..
T Consensus       218 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
T cd05278         218 NPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLV  293 (347)
T ss_pred             cCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeecc
Confidence            9887   6788888888776 8999999999865689999999997 999999864332211122222234778777643


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      ..   .+.+.++++++.++++.+     +.|+++++.+++..
T Consensus       294 ~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  332 (347)
T cd05278         294 PV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRL  332 (347)
T ss_pred             Cc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHH
Confidence            32   578999999999998874     44677777776543

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.5e-40  Score=317.74  Aligned_cols=322  Identities=26%  Similarity=0.416  Sum_probs=276.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++.++++++.+.|.+.+++|+||+.++++|++|+....|..+..  .+|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~~~~~~~   78 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV--TLPHVPGHEFAGVVVEVGEDVSRWRV   78 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC--CCCeeeccceeEEEEEECCCCccCCC
Confidence            7999999887779999999999999999999999999999999888876543  56889999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP  173 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP~  173 (373)
                      ||+|+..+..+|++|.+|..|..++|+++..   .|+..+|                   +|++|+.+++.  .++++|+
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~iP~  136 (345)
T cd08260          79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG-------------------SFAEYVAVPRADVNLVRLPD  136 (345)
T ss_pred             CCEEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------------cceeEEEcccccCceEECCC
Confidence            9999987778899999999999999998753   4555556                   89999999975  9999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++++.++..++|||+++.+..++.++++|+|+|+|++|++++++|+..|+ +|+++.+++++.+.++++|++++++
T Consensus       137 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~  215 (345)
T cd08260         137 DVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN  215 (345)
T ss_pred             CCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEc
Confidence            999999999999999999987778889999999999999999999999999999 8999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc-cccCHHHHhh-CcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-ISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-~~~~~~~~~~-~~~i~g~~~  331 (373)
                      .+.  +.++.+.+..+.++++|++|||+|+...+..++++++++ |+++.+|....... .+++...++. +.++.+...
T Consensus       216 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (345)
T cd08260         216 ASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG  292 (345)
T ss_pred             ccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence            763  246667777776658999999999766688999999997 99999997543322 4556655544 888888754


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      .   ..+.+++++++++++++.+     +.++++++.++++.
T Consensus       293 ~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~  331 (345)
T cd08260         293 M---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAA  331 (345)
T ss_pred             C---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHH
Confidence            3   2578999999999998864     55777777776654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=2e-40  Score=320.20  Aligned_cols=322  Identities=28%  Similarity=0.415  Sum_probs=272.5

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC----------CCCCCCccccCcccEEEEE
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPVIFGHEAVGVVES   85 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----------~~~~~p~~~G~e~~G~V~~   85 (373)
                      |||+++..++.+++++++|.|+++++||+|++.++++|++|+..+.+.++.          ....+|.++|||++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            799999988877999999999999999999999999999999988875431          0014567899999999999


Q ss_pred             eCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335           86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        86 vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      +|++++++++||+|++.+...|++|..|.++.+++|....+   .|....|                   +|++|+.++.
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~  138 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQDG-------------------GYAEYVIVPH  138 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeeccC-------------------cceeeEEecH
Confidence            99999999999999999999999999999999999977644   3333445                   8999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      +.++++|+++++.+++.+.+.+.|||+++.+...+.++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus       139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  218 (350)
T cd08240         139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA  218 (350)
T ss_pred             HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999999999999987766667789999999889999999999999999779999999999999999


Q ss_pred             cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCc
Q 017335          246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGR  324 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~  324 (373)
                      +|++.+++.+.   .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|...........  .+. ++.
T Consensus       219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~--~~~~~~~  292 (350)
T cd08240         219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLP--LLPLRAL  292 (350)
T ss_pred             hCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHH--HHhhcCc
Confidence            99999998876   67777777776658999999999777799999999997 999999875443222322  233 488


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ++.++....   .+++.+++++++++.++.   ..|+++++.++++.
T Consensus       293 ~i~~~~~~~---~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~  336 (350)
T cd08240         293 TIQGSYVGS---LEELRELVALAKAGKLKPIPLTERPLSDVNDALDD  336 (350)
T ss_pred             EEEEcccCC---HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHH
Confidence            888876544   478999999999998764   66778777777654

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2.2e-40  Score=314.75  Aligned_cols=289  Identities=16%  Similarity=0.195  Sum_probs=229.4

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeecc-ccchhcccCCCCCCC-CCCCccccCcccEEEEEeCCCCCc
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLC-HSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      +|||+++.+++. +++++.|.|+|+++||||||.++||| ++|++.+.|.++... ..+|.++|||++|+|+++|+++ +
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            589999998876 99999999999999999999999996 799998888754321 1579999999999999999998 6


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      |++||||++.+    ..|..|..               |  .+|                   +|+||+.+|++.++++|
T Consensus        79 ~~vGdrV~~~~----~~c~~~~~---------------~--~~G-------------------~~aey~~v~~~~~~~ip  118 (308)
T TIGR01202        79 FRPGDRVFVPG----SNCYEDVR---------------G--LFG-------------------GASKRLVTPASRVCRLD  118 (308)
T ss_pred             CCCCCEEEEeC----cccccccc---------------c--cCC-------------------cccceEEcCHHHceeCC
Confidence            99999998742    23333211               1  124                   99999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++. ++++ .+.|||+++.+ . ..++++|||+|+|++|++++|+||.+|++.|++++.++++++.+++   .+++
T Consensus       119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i  191 (308)
T TIGR01202       119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVL  191 (308)
T ss_pred             CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---cccc
Confidence            9999864 5555 67899997644 3 3468899999999999999999999999667778888777766654   3455


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      |+.+   .         .+.++|+||||+|+..+++.++++++++ |+++++|....  ..+++...++. ++++.++..
T Consensus       192 ~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~  256 (308)
T TIGR01202       192 DPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAE  256 (308)
T ss_pred             Chhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEecc
Confidence            5432   1         1238999999999987789999999997 99999998543  34555555555 889988754


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGLL  370 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~l  370 (373)
                      ..   .++++++++++++|++++     +.|+++++++|+..++
T Consensus       257 ~~---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~  297 (308)
T TIGR01202       257 WQ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAF  297 (308)
T ss_pred             cc---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHh
Confidence            33   578999999999999974     6788999999887543

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.1e-39  Score=314.30  Aligned_cols=319  Identities=28%  Similarity=0.370  Sum_probs=273.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.+++. +++++.+.|+| .++||+||+.++++|++|+..+.|..+..  .+|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV--TPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC--CCCceecccceEEEEEeccCccccC
Confidence            78999998887 99999999986 89999999999999999999998876544  5688999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT  172 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP  172 (373)
                      +||+|++.+...|+.|.+|..+.++.|......  .|...+|                   +|++|+.++.+  .++++|
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~~~lp  136 (345)
T cd08286          78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLIDG-------------------TQAEYVRIPHADNSLYKLP  136 (345)
T ss_pred             CCCEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccCC-------------------eeeeEEEcccccCceEECC
Confidence            999999999999999999999999999876542  2333445                   99999999987  999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++.+++.++..+++||.++.....+.++++|||.|+|++|++++|+|+.+|..+|+++++++++.+.++++|+++++
T Consensus       137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v  216 (345)
T cd08286         137 EGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTV  216 (345)
T ss_pred             CCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCcee
Confidence            99999999999999999998777788899999999998899999999999999944899999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      +++.   .++...+.+++++ ++|++|||+|....++.+++.++++ |+++.+|....  ..+++...++. ++++.+..
T Consensus       217 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~  290 (345)
T cd08286         217 NSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGL  290 (345)
T ss_pred             cccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeec
Confidence            9876   6777788887776 8999999999877789999999997 99999996432  34566666444 88988753


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      ..    .+.+.+++++++++.+++     +.|+++++.++++.
T Consensus       291 ~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~  329 (345)
T cd08286         291 VD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDT  329 (345)
T ss_pred             Cc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHH
Confidence            22    256888999999998864     55788888777543

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.4e-39  Score=305.02  Aligned_cols=255  Identities=21%  Similarity=0.368  Sum_probs=216.0

Q ss_pred             cccCcccEEEEEeCCCCC------ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-------CCCCccc
Q 017335           74 IFGHEAVGVVESVGEYVE------EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-------RDGTSRF  140 (373)
Q Consensus        74 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-------~~G~~~~  140 (373)
                      ++|||++|+|+++|++|+      ++++||||++.+...|+.|.+|+.|++++|++...   .|..       .+|    
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~~~~~~G----   73 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDSGWPLSG----   73 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccCCccccc----
Confidence            589999999999999999      89999999999999999999999999999987553   2322       234    


Q ss_pred             cccCCceecccccccceeeeEEeecc-ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHH
Q 017335          141 RELKGDVIHHFLNISSFTEYSVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVA  219 (373)
Q Consensus       141 ~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~  219 (373)
                                     +|+||+.+|+. .++++|+++++++++.+++.+.|+|+++ +.....++++|||+|+|++|++++
T Consensus        74 ---------------~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~  137 (280)
T TIGR03366        74 ---------------GYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAA  137 (280)
T ss_pred             ---------------cceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHH
Confidence                           99999999997 7999999999999999999999999965 555667999999999999999999


Q ss_pred             HHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCC
Q 017335          220 EGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGW  298 (373)
Q Consensus       220 ~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~  298 (373)
                      |+||.+|+++|++++++++|++.++++|++++++.+.     ..+.+.+++++ ++|++||++|.+..++.++++++++ 
T Consensus       138 ~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-  211 (280)
T TIGR03366       138 AAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-  211 (280)
T ss_pred             HHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-
Confidence            9999999955999999999999999999999998654     24556667666 8999999999888899999999997 


Q ss_pred             ceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcC--CCCCCccccc
Q 017335          299 GKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDK--VHLRSSFHLC  360 (373)
Q Consensus       299 G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g--~i~~~~~~~~  360 (373)
                      |+++.+|........+++...++. +++++|+..+.   .++++++++++.++  +++++++..+
T Consensus       212 G~iv~~G~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~  273 (280)
T TIGR03366       212 GTAVLAGSVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGK  273 (280)
T ss_pred             CEEEEeccCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhc
Confidence            999999975433455777777776 99999986433   57899999999984  5554444333

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=3.8e-39  Score=316.82  Aligned_cols=328  Identities=20%  Similarity=0.186  Sum_probs=267.5

Q ss_pred             cccceeeEEeec--CCC---CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC--------CCCCCC-ccccC
Q 017335           12 KVIRCKAAICRI--PGK---PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLP-VIFGH   77 (373)
Q Consensus        12 ~~~~~ka~~~~~--~~~---~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~--------~~~~~p-~~~G~   77 (373)
                      +|.+|||+++..  .+.   .+++.++|.|.|++++|+||+.++++|++|++...+....        .....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            678899999965  443   3899999999999999999999999999998766553210        000123 37999


Q ss_pred             cccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccc
Q 017335           78 EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISS  156 (373)
Q Consensus        78 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~  156 (373)
                      |++|+|+++|++++.+++||+|++.+...|++|+.|+.|.+++|.....   .|.. .+|                   +
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~g-------------------~  141 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNFG-------------------S  141 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCCc-------------------c
Confidence            9999999999999999999999999999999999999999999976432   2321 234                   9


Q ss_pred             eeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHH--HhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE
Q 017335          157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV  233 (373)
Q Consensus       157 ~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~--~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~  233 (373)
                      |++|+.++.+.++++|+++++++++.+.+.+.|||.++..  ...++++++|+|+|+ |++|++++++|+.+|+ +++++
T Consensus       142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~  220 (398)
T TIGR01751       142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV  220 (398)
T ss_pred             ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence            9999999999999999999999999999999999997654  467899999999998 9999999999999999 78888


Q ss_pred             cCChhHHHHHHHcCCceEEcCCCCC-------------------CccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHH
Q 017335          234 DINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNS  293 (373)
Q Consensus       234 ~~~~~~~~~~~~lga~~vi~~~~~~-------------------~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~  293 (373)
                      ++++++.+.++++|+++++|++++.                   ...+.+.+.+++++ ++|++|||+|... +..++++
T Consensus       221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~  299 (398)
T TIGR01751       221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFV  299 (398)
T ss_pred             cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHh
Confidence            8899999999999999999876410                   01355667777776 8999999999754 8899999


Q ss_pred             hccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          294 SREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       294 l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ++++ |+++.+|.... ...+++...+.. +.++.++.++.   ..++.+++++++++++.+   +.|+++++++++..
T Consensus       300 l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~  373 (398)
T TIGR01751       300 CRRG-GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQD  373 (398)
T ss_pred             hccC-CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHH
Confidence            9997 99999997533 234555555555 78888876554   456789999999998874   67788888777654

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.5e-39  Score=310.62  Aligned_cols=342  Identities=32%  Similarity=0.511  Sum_probs=275.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc---
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE---   92 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   92 (373)
                      |||+++.+++.++++++.|.|.++++||+||+.++++|++|+..+.+..+.   .+|.++|||++|+|+.+|+++++   
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~p~~~g~e~~G~v~~vG~~~~~~~~   77 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF---PPPFVLGHEISGEVVEVGPNVENPYG   77 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC---CCCcccccccceEEEEeCCCCCCCCc
Confidence            789999998777999999999999999999999999999999988876543   57789999999999999999988   


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCC-CCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      |++||+|+..+...|+.|.+|.-+.+++|+...+ .+..|...+|-..+....+++.. .+..|+|++|+.++.+.++++
T Consensus        78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEEC
Confidence            9999999998888999999999999999987541 11111111110000000000000 012358999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      |+++++.+++.++..++|||.++.+...+.++++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v  236 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT  236 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence            99999999999999999999988777788999999999889999999999999999449999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEe
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGT  329 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~  329 (373)
                      ++.+.   .++..++.+.+++ ++|+|||++++......++++++++ |+++.+|.........++...++ +++++.++
T Consensus       237 ~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  312 (367)
T cd08263         237 VNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGS  312 (367)
T ss_pred             ecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence            99887   6788888888766 8999999999874589999999997 99999986543333456666654 48888875


Q ss_pred             ecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335          330 YFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA  367 (373)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~  367 (373)
                      ...  ...+.+.+++++++++++.+     +.|+++++.++++
T Consensus       313 ~~~--~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~  353 (367)
T cd08263         313 YGA--RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYE  353 (367)
T ss_pred             CCC--CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHH
Confidence            322  22578999999999999875     4477777776654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-39  Score=309.29  Aligned_cols=314  Identities=27%  Similarity=0.357  Sum_probs=266.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.++++++++++.|.|.++++|++|++.++++|++|+....|..+..  .+|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~   78 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM--KYPVILGHEVVGTVEEVGENVKGFKP   78 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC--CCCeeccccceEEEEEeCCCCccCCC
Confidence            7899999998889999999999999999999999999999999888865544  56789999999999999999988999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|++.....|+.|.+|..+.+++|.....   .|...+|                   +|++|+.++.+.++++|+++
T Consensus        79 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~  136 (334)
T PRK13771         79 GDRVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNV  136 (334)
T ss_pred             CCEEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCC
Confidence            9999999888999999999999999988654   4544556                   99999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      ++.+++.+++.+.+||.++.+. .++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++ ++++++.
T Consensus       137 ~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~  213 (334)
T PRK13771        137 SDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVG  213 (334)
T ss_pred             CHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCc
Confidence            9999999999999999977555 8999999999998 9999999999999999 899999999999999888 7777754


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      +     ++.+.+.++  +++|+++||+|+.. ...++++++++ |+++.+|..+....++++...++. +.++.+.... 
T Consensus       214 ~-----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  283 (334)
T PRK13771        214 S-----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA-  283 (334)
T ss_pred             h-----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC-
Confidence            3     345555554  37999999999865 88999999997 999999975433222233333333 8888887422 


Q ss_pred             CCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                        .+++++++++++++++++.   +.|+++++.+++..
T Consensus       284 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~  319 (334)
T PRK13771        284 --TKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEE  319 (334)
T ss_pred             --CHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHH
Confidence              3688999999999998864   67888888887654

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.6e-39  Score=306.78  Aligned_cols=315  Identities=30%  Similarity=0.495  Sum_probs=267.3

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||++++.++. +++.+++.|.++++||+|+|.++++|+.|+....+..+..  .+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCCCCCC
Confidence            78999998876 9999999999999999999999999999999888776544  46788999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|+..+...|+.|..|+.++++.|.+...   .++...|                   +|++|+.++++ ++++|+++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~-~~~~p~~~  134 (337)
T cd08261          78 GDRVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRDG-------------------GFAEYIVVPAD-ALLVPEGL  134 (337)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCCC-------------------cceeEEEechh-eEECCCCC
Confidence            9999998888999999999999999965432   3333345                   89999999999 99999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++++ ..+++++.++ +...++++++|||+|+|.+|.+++++|+.+|+ +|+++.+++++.+.++++|++++++++
T Consensus       135 ~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~  211 (337)
T cd08261         135 SLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG  211 (337)
T ss_pred             CHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc
Confidence            99999877 4778888865 77889999999999889999999999999999 899999899999999999999999988


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      .   .++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|...  ....++...+.. ++++.+..   
T Consensus       212 ~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~---  282 (337)
T cd08261         212 D---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSR---  282 (337)
T ss_pred             c---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEec---
Confidence            7   6788888888776 8999999998877789999999997 9999998643  233455555554 78887763   


Q ss_pred             CCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      ....+.+.++++++++|++.+     ..++++++.++++.
T Consensus       283 ~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~  322 (337)
T cd08261         283 NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDL  322 (337)
T ss_pred             cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHH
Confidence            223567899999999999875     44667777666543

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=5.8e-39  Score=308.86  Aligned_cols=320  Identities=25%  Similarity=0.378  Sum_probs=262.5

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||++++.++++.+++.+.|.|.|+++||+||+.++++|++|+..+.+.. ......+|.++|||++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            6899999888779999999999999999999999999999998766532 111114678999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+..+...|+.|.+|+.+.+++|++..+   .+...+|                   +|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~iP~~  138 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------------AFAEYLVIPAFNVWKIPDD  138 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------------cceeeEEechHHeEECcCC
Confidence            99999999999999999999999999987643   4444556                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++++.+ ..+.+++.++..  ...+|++|+|.|+|++|++++++|+.+|+++|+++++++++.+.++++|+++++++
T Consensus       139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~  215 (341)
T PRK05396        139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV  215 (341)
T ss_pred             CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence            999988755 466666654432  34689999999889999999999999999668888889999999999999999988


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      +.   .++.+.+.+++++ ++|+||||.|+...++.++++++++ |+++.+|....  ..+++...+.. ++++.++...
T Consensus       216 ~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~  289 (341)
T PRK05396        216 AK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGR  289 (341)
T ss_pred             cc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEcc
Confidence            77   6788888888776 8999999999887799999999997 99999997543  23344445555 7888876522


Q ss_pred             CCCchhHHHHHHHHHHcC-CCC---CCcccccCCCccccc
Q 017335          333 GLKPRSDIATLAQKYLDK-VHL---RSSFHLCDPNSDSAG  368 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g-~i~---~~~~~~~~~~~a~~~  368 (373)
                      .  ..+.+.++++++.++ ++.   .+.|+++++.+++..
T Consensus       290 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~  327 (341)
T PRK05396        290 E--MFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEA  327 (341)
T ss_pred             C--ccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHH
Confidence            2  235567788999888 332   266778877777644

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=3.1e-39  Score=308.69  Aligned_cols=296  Identities=19%  Similarity=0.213  Sum_probs=246.7

Q ss_pred             eeeEEeecCCC-----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           16 CKAAICRIPGK-----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        16 ~ka~~~~~~~~-----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      |||+++.+++.     .+++.++|.|.|+++||+||+.++++|++|+..+.|..+... .+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~-~~p~v~G~e~~G~V~~vG~~v   79 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTK-ALPVPPGFEGSGTVVAAGGGP   79 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCcCCCcceEEEEEEECCCc
Confidence            78999998874     378889999999999999999999999999998888654322 578899999999999999999


Q ss_pred             Cc-cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335           91 EE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  169 (373)
Q Consensus        91 ~~-~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  169 (373)
                      ++ |++||+|+....                             .+|                   +|++|+.+|++.++
T Consensus        80 ~~~~~vGd~V~~~~~-----------------------------~~g-------------------~~a~~~~v~~~~~~  111 (324)
T cd08291          80 LAQSLIGKRVAFLAG-----------------------------SYG-------------------TYAEYAVADAQQCL  111 (324)
T ss_pred             cccCCCCCEEEecCC-----------------------------CCC-------------------cchheeeecHHHeE
Confidence            96 999999985321                             023                   89999999999999


Q ss_pred             EcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE-C-CChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF-G-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       170 ~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~-G-~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      ++|+++++++++.+++...|||. +.+.... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++.+.++++|
T Consensus       112 ~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g  188 (324)
T cd08291         112 PLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIG  188 (324)
T ss_pred             ECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence            99999999999988888899986 4555555 55666665 4 49999999999999999 8999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS  325 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  325 (373)
                      ++++++++.   .++.+.+++.+++ ++|++||++|+.. ....+++++++ |+++.+|.........++...++. +++
T Consensus       189 ~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  263 (324)
T cd08291         189 AEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKS  263 (324)
T ss_pred             CcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcE
Confidence            999999887   7888899888877 8999999999877 77889999997 999999974332222354555555 899


Q ss_pred             EEEeecCCCC---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          326 VCGTYFGGLK---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       326 i~g~~~~~~~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      +.++....+.   ..+++++++++++ +++++   +.|+++++.+|++.+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~  312 (324)
T cd08291         264 IEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFY  312 (324)
T ss_pred             EEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHH
Confidence            9998765532   2467888999988 88876   789999999998754

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.1e-38  Score=306.86  Aligned_cols=319  Identities=26%  Similarity=0.358  Sum_probs=264.8

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.+++. +++++++.|.|. ++||+||+.++++|+.|+..+.|.++.   .+|.++|||++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS---TPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC---CCCcccccceEEEEEeeCCCccccC
Confidence            68999988765 999999999985 999999999999999999888776542   4678999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCC-CCCCCCccccccCCceecccccccceeeeEEeecc--ceEEc
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKI  171 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g-~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~l  171 (373)
                      +||+|+..+...|++|.+|.++++++|++.......+ ...+                   |+|++|+.++++  .++++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~~~v~~~~~~~~~~  137 (344)
T cd08284          77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLD-------------------GAQAEYVRVPFADGTLLKL  137 (344)
T ss_pred             CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCC-------------------CceeEEEEcccccCceEEC
Confidence            9999999998999999999999999998754310001 0113                   489999999865  99999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      |+++++++++.++..++|||+++ ....+.++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|+. +
T Consensus       138 p~~l~~~~a~~l~~~~~ta~~~~-~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~  215 (344)
T cd08284         138 PDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-P  215 (344)
T ss_pred             CCCCCHHHhhhhcCchHHHHhhh-HhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-E
Confidence            99999999999999999999976 457889999999998899999999999999975799998899999999999985 5


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      ++.+.   .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|.... ...+.+....+. ++++.+.
T Consensus       216 ~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~  290 (344)
T cd08284         216 INFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFG  290 (344)
T ss_pred             EecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEe
Confidence            66655   5788888888876 8999999999877799999999997 99999997542 233444444444 8888765


Q ss_pred             ecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335          330 YFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA  367 (373)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~  367 (373)
                      .   ....+.+.+++++++++++.+     +.|+++++.+++.
T Consensus       291 ~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~  330 (344)
T cd08284         291 R---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYR  330 (344)
T ss_pred             c---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHH
Confidence            2   123578999999999999864     5577777776654

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.5e-39  Score=306.70  Aligned_cols=310  Identities=26%  Similarity=0.367  Sum_probs=259.4

Q ss_pred             eeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. ...  .+|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~--~~~~~~g~e~~G~v~~vG~~v~~~~   77 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVK--PMPHIPGAEFAGVVEEVGDHVKGVK   77 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCC--CCCeecccceeEEEEEECCCCCCCC
Confidence            7899998766 34888888888899999999999999999999887642 222  4577899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|++.+...|++|.+|+.|.+++|.++.+   .|+..+|                   +|++|+.++++.++++|++
T Consensus        78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~  135 (325)
T cd08264          78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDS  135 (325)
T ss_pred             CCCEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCC
Confidence            99999999999999999999999999987653   4544455                   8999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      +++++++.+++.+.+||+++. ..+++++++|+|+|+ |++|++++++|+.+|+ +|+++.+    .+.++++|++++++
T Consensus       136 ~~~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~  209 (325)
T cd08264         136 ISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVD  209 (325)
T ss_pred             CCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeec
Confidence            999999999999999999764 488999999999998 9999999999999999 7888863    36677899999987


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      .+.     ..+.+.+++ +++|+|+|++|.. .+..++++++++ |+++.+|.. .....+++...+.. +.++.++..+
T Consensus       210 ~~~-----~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~  280 (325)
T cd08264         210 YDE-----VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGG  280 (325)
T ss_pred             chH-----HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCC
Confidence            654     345566666 6899999999975 599999999997 999999874 22335667777666 8888887655


Q ss_pred             CCCchhHHHHHHHHHHcCCCCC-CcccccCCCccccc
Q 017335          333 GLKPRSDIATLAQKYLDKVHLR-SSFHLCDPNSDSAG  368 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~a~~~  368 (373)
                      .   ++.+.++++++...++.. +.|++++++++++.
T Consensus       281 ~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~  314 (325)
T cd08264         281 T---RKELLELVKIAKDLKVKVWKTFKLEEAKEALKE  314 (325)
T ss_pred             C---HHHHHHHHHHHHcCCceeEEEEcHHHHHHHHHH
Confidence            4   578999999997666433 77888888887654

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.9e-39  Score=308.03  Aligned_cols=321  Identities=24%  Similarity=0.335  Sum_probs=267.0

Q ss_pred             eeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCC
Q 017335           17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER   96 (373)
Q Consensus        17 ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   96 (373)
                      |+++.+.++..+++++++.|+|+++||+||+.++++|++|+..+.+.....  .+|.++|||++|+|+++|+++++|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPT--KYPLVPGHEIVGIVVAVGSKVTKFKVG   78 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCC--CCCcccCcceeeEEEEECCCCcccCCC
Confidence            578888888779999999999999999999999999999999988876443  578899999999999999999999999


Q ss_pred             CEEEee-CCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           97 DLVLPI-FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        97 d~V~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      |+|++. ....|++|.+|..+.+++|+.....+ .|....|              .+..|+|++|+.++.+.++++|+++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~  143 (337)
T cd05283          79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGL  143 (337)
T ss_pred             CEEEEecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCC
Confidence            999854 44579999999999999998865431 1111111              0112489999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++.+.+.+.+||.++ +...++++++|+|.|.|++|++++++++.+|+ +|+++++++++.++++++|++++++.+
T Consensus       144 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~  221 (337)
T cd05283         144 DSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK  221 (337)
T ss_pred             CHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc
Confidence            9999999999999999975 45568999999998889999999999999999 999999999999999999999999876


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL  334 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  334 (373)
                      .   .++...    ..+++|++|||+|....+..++++++++ |+++.+|.....  .+++...++. ++++.++..+. 
T Consensus       222 ~---~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~-  290 (337)
T cd05283         222 D---PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEP--LPVPPFPLIFGRKSVAGSLIGG-  290 (337)
T ss_pred             c---hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCC--CccCHHHHhcCceEEEEecccC-
Confidence            5   333221    1348999999999875589999999997 999999975432  2556666554 99999987654 


Q ss_pred             CchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          335 KPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       335 ~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                        .+++.+++++++++++++  +.|+++++.+|++.+
T Consensus       291 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~  325 (337)
T cd05283         291 --RKETQEMLDFAAEHGIKPWVEVIPMDGINEALERL  325 (337)
T ss_pred             --HHHHHHHHHHHHhCCCccceEEEEHHHHHHHHHHH
Confidence              578999999999999875  778888888877543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.4e-38  Score=305.62  Aligned_cols=317  Identities=27%  Similarity=0.383  Sum_probs=264.6

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++....+++.|.|++.++||+|||.++++|++|+..+.+..+.   ..|.++|||++|+|+++|++++.|++
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKV   77 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCccCCC
Confidence            899999998774448999999999999999999999999999988776532   34678999999999999999999999


Q ss_pred             CCEEEeeC-CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        96 Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      ||+|++.+ ...|+.|..|..+..++|.+...   .|+..+|                   +|++|+.++.+.++++|++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~  135 (338)
T PRK09422         78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEG  135 (338)
T ss_pred             CCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCC
Confidence            99999765 46799999999999999987653   4555666                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      +++++++.++....|||+++ +...++++++|||+|+|++|++++++|+. +|+ +|+++++++++.+.++++|++.+++
T Consensus       136 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  213 (338)
T PRK09422        136 LDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN  213 (338)
T ss_pred             CCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEec
Confidence            99999999999999999976 77889999999999999999999999998 599 8999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      ++.  ..++.+.+.+.++ ++|+++++.++...+..++++++.+ |+++.+|....  ..+++...+.. +.++.++..+
T Consensus       214 ~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~  287 (338)
T PRK09422        214 SKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG  287 (338)
T ss_pred             ccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC
Confidence            753  1456677777765 6886555555566699999999997 99999987432  34455555554 7888776533


Q ss_pred             CCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          333 GLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                      .   .+++.++++++++|++.+  ..++++++.+++..
T Consensus       288 ~---~~~~~~~~~l~~~g~l~~~v~~~~~~~~~~a~~~  322 (338)
T PRK09422        288 T---RQDLEEAFQFGAEGKVVPKVQLRPLEDINDIFDE  322 (338)
T ss_pred             C---HHHHHHHHHHHHhCCCCccEEEEcHHHHHHHHHH
Confidence            3   578999999999998864  55677777766543

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.5e-39  Score=289.00  Aligned_cols=310  Identities=23%  Similarity=0.311  Sum_probs=262.4

Q ss_pred             CCCCCCcccceeeEEeecCCCC---eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEE
Q 017335            6 ASPKAGKVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGV   82 (373)
Q Consensus         6 ~~~~~~~~~~~ka~~~~~~~~~---l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~   82 (373)
                      .+++.+++...|++++++.|+|   +++++.++|..+.++|+||..|+.||++|+..++|.|+..+ .+|.+-|+|++|+
T Consensus        10 ~ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~e   88 (354)
T KOG0025|consen   10 SSSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVGE   88 (354)
T ss_pred             cccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceEE
Confidence            3455678899999999998887   88999999998888899999999999999999999998876 8899999999999


Q ss_pred             EEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEE
Q 017335           83 VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV  162 (373)
Q Consensus        83 V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~  162 (373)
                      |+.+|+.++.|++||.|+....                                                +.|+|++|.+
T Consensus        89 Vv~vGs~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v  120 (354)
T KOG0025|consen   89 VVAVGSNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAV  120 (354)
T ss_pred             EEEecCCcCccCCCCeEeecCC------------------------------------------------CCccceeeEe
Confidence            9999999999999999987643                                                2459999999


Q ss_pred             eeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH-
Q 017335          163 VDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-  240 (373)
Q Consensus       163 v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~-  240 (373)
                      .+++.++++++.++++.||.+.+..+|||+++.+..++.+||+|+-.|+ +++|++.+|+||++|+ +-|-+.|+-... 
T Consensus       121 ~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ie  199 (354)
T KOG0025|consen  121 FSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIE  199 (354)
T ss_pred             ecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHH
Confidence            9999999999999999999999999999999999999999999999998 9999999999999999 555555554433 


Q ss_pred             ---HHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccC
Q 017335          241 ---EIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN  316 (373)
Q Consensus       241 ---~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~  316 (373)
                         +.++.+||++||...+..+..+...   .... .+.+.|||+|+.. ...+.+.|.+| |+++.+|. ++.++++++
T Consensus       200 el~~~Lk~lGA~~ViTeeel~~~~~~k~---~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGG-MSkqPv~~~  273 (354)
T KOG0025|consen  200 ELKKQLKSLGATEVITEEELRDRKMKKF---KGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGG-MSKQPVTVP  273 (354)
T ss_pred             HHHHHHHHcCCceEecHHHhcchhhhhh---hccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecC-ccCCCcccc
Confidence               3356799999996554222222111   1123 7899999999988 77888999997 99999998 788889998


Q ss_pred             HHHHhh-CcEEEEeecCCCCc--------hhHHHHHHHHHHcCCCCC---CcccccCCCcccccccc
Q 017335          317 SIEILK-GRSVCGTYFGGLKP--------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGLLV  371 (373)
Q Consensus       317 ~~~~~~-~~~i~g~~~~~~~~--------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~l~  371 (373)
                      ...++. ++.++|+++..|..        .+.+.++.++++.|+|..   +..++++...|...+|.
T Consensus       274 ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~  340 (354)
T KOG0025|consen  274 TSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALS  340 (354)
T ss_pred             cchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHH
Confidence            888887 99999999888763        245788999999999986   67788888877777663

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.6e-38  Score=306.09  Aligned_cols=316  Identities=28%  Similarity=0.398  Sum_probs=265.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.+++. +++++.|.|.| +++||+||+.++++|++|+..+.|..+.   ..|.++|||++|+|+++|++++.++
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT---RAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC---CCCcccccceEEEEEEeCCCCCccC
Confidence            78999998876 99999999996 8999999999999999999888876542   4578999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT  172 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP  172 (373)
                      +||+|+......|+.|..|..|+.++|....+   .|...+|                   +|++|+.+|.+  .++++|
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP  134 (345)
T cd08287          77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVP  134 (345)
T ss_pred             CCCEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECC
Confidence            99999886677899999999999999987554   4555556                   99999999975  999999


Q ss_pred             CCCChhhhh-----ccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          173 PHIPLGIAC-----LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       173 ~~l~~~~aa-----~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      ++++++.+.     ++...+.+||+++ ....++++++|+|.|+|++|++++++|+.+|++.++++++++++.+.++++|
T Consensus       135 ~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g  213 (345)
T cd08287         135 GSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFG  213 (345)
T ss_pred             CCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence            999883221     2235788899875 5678999999999988999999999999999966899999998999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH-HhhCcE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRS  325 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~~~~  325 (373)
                      ++++++++.   .++.+.+.+.+++ ++|+++|++|+...++.++++++++ |+++.+|....  ...++... +.++++
T Consensus       214 a~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~  287 (345)
T cd08287         214 ATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVG  287 (345)
T ss_pred             CceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceE
Confidence            999999987   6788888888877 8999999999877799999999997 99999987542  34555533 444999


Q ss_pred             EEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335          326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA  367 (373)
Q Consensus       326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~  367 (373)
                      +.+.....   .+.+.++++++.++++.+     +.|+++++.+++.
T Consensus       288 ~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~  331 (345)
T cd08287         288 LAGGPAPV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYR  331 (345)
T ss_pred             EEEecCCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHH
Confidence            98764222   467999999999999874     5577787777654

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.2e-38  Score=304.68  Aligned_cols=320  Identities=27%  Similarity=0.412  Sum_probs=273.4

Q ss_pred             eeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++..++ ..+++++++.|.|.++||+||+.++++|++|+..+.+..+... ..|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKP-KLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCC-CCCccCCcccceEEEEeCCCCCCCC
Confidence            7999999877 3399999999999999999999999999999998887654321 4567899999999999999999999


Q ss_pred             CCCEEEeeC-CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           95 ERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        95 ~Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      +||+|+..+ ...|+.|.+|..++..+|.+...   .|+...|                   +|++|+.++++.++++|+
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~  137 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPD  137 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCC
Confidence            999999876 46799999999999999988754   5555556                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++++.++....|||.++.. ..++++++|||+|+ +++|++++++|+.+|+ +|+++.+++++.+.++++|+++++
T Consensus       138 ~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~  215 (341)
T cd08297         138 GLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFV  215 (341)
T ss_pred             CCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999997654 58999999999998 6799999999999999 999999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      +++.   .++.+.+.+.+++ ++|+++|+.++...+..++++++++ |+++.+|... ....+++...++. +.++.+..
T Consensus       216 ~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~  290 (341)
T cd08297         216 DFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSL  290 (341)
T ss_pred             cCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEec
Confidence            9887   6788888888766 8999999888777799999999997 9999999754 2334666666555 88988864


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                      ...   .+++++++++++++++.+  ..|+++++.+++..
T Consensus       291 ~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~  327 (341)
T cd08297         291 VGT---RQDLQEALEFAARGKVKPHIQVVPLEDLNEVFEK  327 (341)
T ss_pred             cCC---HHHHHHHHHHHHcCCCcceeEEEcHHHHHHHHHH
Confidence            433   578999999999998864  56677776666543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.3e-38  Score=310.63  Aligned_cols=328  Identities=27%  Similarity=0.377  Sum_probs=265.3

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||++++.+++. ++++++|.|.+ +++||+|||.+++||++|++.+.|..+.   .+|.++|||++|+|+++|+.+++++
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~---~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA---EPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC---CCCceeccccEEEEEEeCCCCCcCC
Confidence            68999998875 99999999996 7999999999999999999999887652   4688999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT  172 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP  172 (373)
                      +||+|+..+..+|+.|..|+.+..++|.+.......  ...|....        .+  ..|+|++|+.+|.+  .++++|
T Consensus        77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~--~~g~~a~y~~v~~~~~~~~~lP  144 (375)
T cd08282          77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG--GAYGYVDM--------GP--YGGGQAEYLRVPYADFNLLKLP  144 (375)
T ss_pred             CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCccccc--cccccccc--------CC--CCCeeeeEEEeecccCcEEECC
Confidence            999999999999999999999999999864321000  00010000        00  02489999999976  899999


Q ss_pred             CCCChh---hhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          173 PHIPLG---IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       173 ~~l~~~---~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      ++++++   +++.+...++|||+++ +...+++|++|+|.|+|++|++++++|+.+|+.+|+++++++++.+.++++|+ 
T Consensus       145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-  222 (375)
T cd08282         145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-  222 (375)
T ss_pred             CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-
Confidence            999998   5677888999999987 78889999999999889999999999999997679999999999999999998 


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH-----------HHHHHHHHhccCCceEEEEcccCCCC-------
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVILGVEMHGS-------  311 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~G~~~~~~-------  311 (373)
                      ..++.++   .++.+.+.+++++++|+++||+|...           .+..++++++++ |+++.+|......       
T Consensus       223 ~~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~  298 (375)
T cd08282         223 IPIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA  298 (375)
T ss_pred             eEeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence            4567665   67888888777668999999999762           488999999997 9999888743211       


Q ss_pred             ----ccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          312 ----PISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       312 ----~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                          ...++...++. +.++.++...   ..+.+.+++++++++++++     +.|+++++++++..
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~  362 (375)
T cd08282         299 AKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYAR  362 (375)
T ss_pred             ccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHH
Confidence                23455555555 7777766422   2567889999999999874     77888888887654

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=2.6e-38  Score=304.29  Aligned_cols=319  Identities=28%  Similarity=0.405  Sum_probs=270.3

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++++++. +.+++.+.|++.+++|+|++.++++|+.|+..+.+.....  ..|.++|+|++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~--~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL--KPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccC--CCCcccccceEEEEEeeCCCCCCCCC
Confidence            68999998875 9999999999999999999999999999999888765322  45779999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc-----eEE
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-----VVK  170 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~  170 (373)
                      ||+|+..+...|++|++|..+++++|.....   .|...+|                   +|++|+.++.+.     +++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~~~~~~  135 (343)
T cd08235          78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG-------------------GFAEYVRVPAWAVKRGGVLK  135 (343)
T ss_pred             CCEEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------------cceeeEEecccccccccEEE
Confidence            9999999999999999999999999977543   3444455                   999999999999     999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +|+++++.+++.+ .++.+||.++. ...++++++|||+|+|++|++++++|+..|++.|+++++++++.+.++++|+++
T Consensus       136 lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~  213 (343)
T cd08235         136 LPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY  213 (343)
T ss_pred             CCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcE
Confidence            9999999999876 68899999764 458999999999988999999999999999933999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335          251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  328 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  328 (373)
                      ++++++   .++.+.+++.+++ ++|+||||+++...+..++++++++ |+++.+|........+++...+.. ++++.+
T Consensus       214 ~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~  289 (343)
T cd08235         214 TIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITG  289 (343)
T ss_pred             EecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEE
Confidence            999887   7888888888777 8999999999876689999999997 999999875443334555555554 788877


Q ss_pred             eecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          329 TYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      +....   .+.+++++++++++++.+     ..|+++++.++++.
T Consensus       290 ~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~  331 (343)
T cd08235         290 SYAAS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFEL  331 (343)
T ss_pred             EecCC---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHH
Confidence            65333   467889999999998752     56778877777654

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.8e-38  Score=297.35  Aligned_cols=300  Identities=28%  Similarity=0.461  Sum_probs=257.0

Q ss_pred             eeeEEeecCCC-CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGK-PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~-~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++.++++ .+++++++.|.+.+++|+|||.++++|++|.....+.....  ..|.++|+|++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~   78 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV--ETPVVLGHEFSGTIVEVGPDVEGWK   78 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcC--CCCeeeccceEEEEEEECCCcCcCC
Confidence            68899887552 49999999999999999999999999999998888765333  4678999999999999999999999


Q ss_pred             CCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           95 ERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        95 ~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      +||+|+..+. .+|++|++|..+.++.|++..   +.|...+|                   +|++|+.++...++++|+
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lp~  136 (306)
T cd08258          79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRK---GIGTQADG-------------------GFAEYVLVPEESLHELPE  136 (306)
T ss_pred             CCCEEEEccCcCCCCCCcchhCcCcccCCCCc---eeeecCCC-------------------ceEEEEEcchHHeEECcC
Confidence            9999998875 689999999999999998642   23444445                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEE--cCChhHHHHHHHcCCceE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGV--DINPEKFEIGKKFGITDF  251 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~--~~~~~~~~~~~~lga~~v  251 (373)
                      ++++++++ +...++++|.++.....++++++|||.|+|.+|++++++|+.+|+ +|+++  ++++++.+.++++|++++
T Consensus       137 ~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~  214 (306)
T cd08258         137 NLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV  214 (306)
T ss_pred             CCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc
Confidence            99999887 666888999988888899999999998889999999999999999 78776  345567888899999888


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                       +++.   .++.+.+.+.+++ ++|++||++|....+...+++++++ |+++.+|... .....++...++. +++++|+
T Consensus       215 -~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~  288 (306)
T cd08258         215 -NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGS  288 (306)
T ss_pred             -CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEE
Confidence             7776   7888888887776 8999999998777789999999997 9999999854 3345667777766 9999999


Q ss_pred             ecCCCCchhHHHHHHHHHHcC
Q 017335          330 YFGGLKPRSDIATLAQKYLDK  350 (373)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~g  350 (373)
                      .++.   +++++++++++++|
T Consensus       289 ~~~~---~~~~~~~~~~~~~~  306 (306)
T cd08258         289 RSST---PASWETALRLLASG  306 (306)
T ss_pred             ecCc---hHhHHHHHHHHhcC
Confidence            8766   67899999999876

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.5e-38  Score=309.60  Aligned_cols=324  Identities=25%  Similarity=0.361  Sum_probs=263.6

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC------CCCCCCCCccccCcccEEEEEeC
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST------DLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~------~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      .++.+.++..+ . ++++++|.|++++++|+||+.++++|++|+..+.+..      +.. ..+|.++|||++|+|+++|
T Consensus        27 ~~~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG  103 (384)
T cd08265          27 TNLGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGL-TEFPVVIGHEFSGVVEKTG  103 (384)
T ss_pred             ccceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcc-cCCCcccccceEEEEEEEC
Confidence            34556666643 3 9999999999999999999999999999998876321      111 1567899999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      +++++|++||+|++.+..+|+.|+.|..+.+++|.....   .|+..+|                   +|++|+.++++.
T Consensus       104 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~  161 (384)
T cd08265         104 KNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARY  161 (384)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHH
Confidence            999999999999999999999999999999999987553   5555566                   999999999999


Q ss_pred             eEEcCCCC-------ChhhhhccchhhhhHHHHHHHH-hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          168 VVKITPHI-------PLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       168 ~~~lP~~l-------~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      ++++|+++       +++ ++++..++++||+++... ..+++|++|||+|+|++|++++++|+.+|+++|+++++++++
T Consensus       162 ~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~  240 (384)
T cd08265         162 AWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEER  240 (384)
T ss_pred             eEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence            99999863       455 555666889999987666 689999999999889999999999999998779999999999


Q ss_pred             HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCH-HHHHHHHHHhccCCceEEEEcccCCCCccccCH
Q 017335          240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISLNS  317 (373)
Q Consensus       240 ~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~  317 (373)
                      .+.++++|+++++++++....++...+.+++++ ++|+|+|++|.. ..+..++++++++ |+++.+|....  .++++.
T Consensus       241 ~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~  317 (384)
T cd08265         241 RNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHL  317 (384)
T ss_pred             HHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccH
Confidence            999999999999987751123788888888887 899999999973 4588999999997 99999996432  344454


Q ss_pred             HHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          318 IEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       318 ~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      ..+.. +.++.++....  ....+.+++++++++++.+     +.|+++++.+++..
T Consensus       318 ~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~  372 (384)
T cd08265         318 EVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKA  372 (384)
T ss_pred             HHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHH
Confidence            44444 67888774322  1356899999999999874     45778777776654

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=3.2e-38  Score=302.39  Aligned_cols=318  Identities=27%  Similarity=0.421  Sum_probs=272.3

Q ss_pred             eeeEEeecCCCC-eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKP-LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~-l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+..+.+..+... .+|.++|+|++|+|+++|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~~~~~g~~~~G~v~~~G~~v~~~~   79 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLT-KLPLTLGHEIAGTVVEVGAGVTNFK   79 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccC-CCCEeccccccEEEEEECCCCccCC
Confidence            799999999887 67888889999999999999999999999999888765322 5678999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+..+...|+.|.+|..++.++|....+   .|+..+|                   +|++|+.++.+.++++|++
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~  137 (338)
T cd08254          80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDG  137 (338)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCC
Confidence            99999999999999999999999999977654   4555556                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++++.++.++.|||.++.+...++++++|||.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++.
T Consensus       138 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~  216 (338)
T cd08254         138 VPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNS  216 (338)
T ss_pred             CCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence            99999999999999999988788889999999999889999999999999999 89999999999999999999999887


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      ..   ..+...+ ..+.+ ++|+++||+|....+..++++|+++ |+++.+|....  ...++...+.. +.++.++...
T Consensus       217 ~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~  289 (338)
T cd08254         217 LD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG  289 (338)
T ss_pred             CC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC
Confidence            76   5565656 44555 8999999999877799999999997 99999986432  23455555555 8888887543


Q ss_pred             CCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccc
Q 017335          333 GLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSA  367 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~  367 (373)
                      .   .+.+.+++++++++.+.+  +.++++++.+++.
T Consensus       290 ~---~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~  323 (338)
T cd08254         290 T---PEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLE  323 (338)
T ss_pred             C---HHHHHHHHHHHHcCCCcccceeEcHHHHHHHHH
Confidence            3   578999999999998875  5666666666544

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1e-37  Score=303.04  Aligned_cols=321  Identities=23%  Similarity=0.369  Sum_probs=253.9

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCc
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      .+|+++++..++. +++++.+.|.|.++||+||+.++++|++|+..+.+.... ....+|.++|||++|+|+++|+++++
T Consensus        16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
T PLN02702         16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH   94 (364)
T ss_pred             cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence            4455566666655 899999999999999999999999999999988763211 00135778999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      |++||+|++.+...|++|..|+.|.++.|+...+   .+. ..+|                   +|++|+.++.+.++++
T Consensus        95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~g-------------------~~~~y~~v~~~~~~~~  152 (364)
T PLN02702         95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVHG-------------------SLANQVVHPADLCFKL  152 (364)
T ss_pred             CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCCC-------------------cccceEEcchHHeEEC
Confidence            9999999999999999999999999999986432   221 1244                   9999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      |++++++++++.. ++.++|.++ +...+.++++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++
T Consensus       153 P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~  230 (364)
T PLN02702        153 PENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEI  230 (364)
T ss_pred             CCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence            9999999987633 555678765 77889999999999989999999999999999668889989999999999999988


Q ss_pred             EcCCCCCCccHHHHHHHh---cCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEE
Q 017335          252 INPATCGDKTVSQVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC  327 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  327 (373)
                      ++... ...++.+.+.++   +++++|+|||++|....+..++++++++ |+++.+|....  ..++....... ++++.
T Consensus       231 ~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~  306 (364)
T PLN02702        231 VLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVV  306 (364)
T ss_pred             EecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEE
Confidence            76532 114566666554   2338999999999777799999999997 99999996432  23445545555 88998


Q ss_pred             EeecCCCCchhHHHHHHHHHHcCCCCC-----Cc--ccccCCCcccc
Q 017335          328 GTYFGGLKPRSDIATLAQKYLDKVHLR-----SS--FHLCDPNSDSA  367 (373)
Q Consensus       328 g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~--~~~~~~~~a~~  367 (373)
                      ++...    ...+.+++++++++++.+     +.  ++++++.++++
T Consensus       307 ~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~  349 (364)
T PLN02702        307 GVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFE  349 (364)
T ss_pred             EeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHH
Confidence            87532    357889999999999863     34  33356665543

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.6e-37  Score=299.20  Aligned_cols=317  Identities=28%  Similarity=0.427  Sum_probs=259.5

Q ss_pred             eEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCC-CCCCCCCCCccccCcccEEEEEeCCCCCccCCC
Q 017335           18 AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER   96 (373)
Q Consensus        18 a~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   96 (373)
                      |++++++.. +++++.+.|.+.++||+|||.++++|+.|+..+.+. .......+|.++|+|++|+|+++|+++++|++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            467788755 999999999999999999999999999999876432 111101356789999999999999999999999


Q ss_pred             CEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCC
Q 017335           97 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP  176 (373)
Q Consensus        97 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~  176 (373)
                      |+|++.+..+|++|.+|+.|.+++|++....  .....+|                   +|++|+.++++.++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~  138 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVDG-------------------TLCRYVNHPADFCHKLPDNVS  138 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCCC-------------------ceeeeEEecHHHcEECcCCCC
Confidence            9999999999999999999999999865331  1111234                   899999999999999999999


Q ss_pred             hhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCC
Q 017335          177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  256 (373)
Q Consensus       177 ~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~  256 (373)
                      +++++.+ .++.+||.++ +...++++++|||.|+|++|++++++|+.+|+++|+++++++++.++++++|++++++.+.
T Consensus       139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~  216 (343)
T cd05285         139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT  216 (343)
T ss_pred             HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence            9999877 4888999875 8889999999999988999999999999999944999999999999999999999998876


Q ss_pred             CCCcc---HHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          257 CGDKT---VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       257 ~~~~~---~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                         .+   +.+.+.+.+.+ ++|++|||+|+...++.++++++++ |+++.+|.....  ..++...... ++++.+...
T Consensus       217 ---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~  290 (343)
T cd05285         217 ---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFR  290 (343)
T ss_pred             ---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEecc
Confidence               45   37778777776 7999999999875689999999997 999999864322  3444444444 778777642


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      .    .+.+.+++++++++++.+     +.|+++++.+++..
T Consensus       291 ~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~  328 (343)
T cd05285         291 Y----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFET  328 (343)
T ss_pred             C----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHH
Confidence            2    267899999999998752     56778887777644

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3e-37  Score=295.08  Aligned_cols=320  Identities=23%  Similarity=0.343  Sum_probs=268.7

Q ss_pred             eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++...+.  .+++.+.+.|.+.+++|+|++.++++|++|+..+.|..+... .+|.++|||++|+|+.+|++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~   79 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKL-PLPHILGSDGAGVVEAVGPGVTNV   79 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCC-CCCeecccceEEEEEEeCCCCCCC
Confidence            68999984432  278888888889999999999999999999998887654221 567899999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|++.+...|+.|.+|..+.+++|.+...   .|....|                   +|++|+.++.+.++++|+
T Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~  137 (342)
T cd08266          80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPD  137 (342)
T ss_pred             CCCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCC
Confidence            999999999999999999999999999987533   5555555                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++++.+++.+.+||.++.+...++++++|+|+|+ +.+|++++++++..|+ +|+.+++++++.+.++.++.+.++
T Consensus       138 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~  216 (342)
T cd08266         138 NLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVI  216 (342)
T ss_pred             CCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEE
Confidence            99999999999999999998888888999999999998 7999999999999999 899999999999999888888888


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      +...   .++.+.+...+.+ ++|+++++.|... +..++++++++ |+++.+|..... ...++....+. ++++.+..
T Consensus       217 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  290 (342)
T cd08266         217 DYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGST  290 (342)
T ss_pred             ecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEe
Confidence            7665   6777777777666 8999999999865 88999999997 999999875432 33455533334 88888876


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ...   ...+.+++++++++.+.+   +.|+++++.+++..
T Consensus       291 ~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~  328 (342)
T cd08266         291 MGT---KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRR  328 (342)
T ss_pred             cCC---HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHH
Confidence            443   568899999999998764   66777777766543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.6e-37  Score=297.19  Aligned_cols=308  Identities=20%  Similarity=0.321  Sum_probs=247.8

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC---------CCCCCCccccCcccEEEEEe
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL---------PKLPLPVIFGHEAVGVVESV   86 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---------~~~~~p~~~G~e~~G~V~~v   86 (373)
                      |||+++.++  .+++++++.|++++++|+|+|.++++|+.|+..+.|....         ....+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            789999876  4999999999999999999999999999999988773210         00145789999999999999


Q ss_pred             CCCCCc-cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335           87 GEYVEE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        87 G~~v~~-~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      |+++++ |++||+|+..+...|+.|..|..|..             -..+|                   +|++|+.++.
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-------------~~~~g-------------------~~~~~~~v~~  126 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-------------PEAPG-------------------GYAEYMLLSE  126 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-------------cCCCC-------------------ceeeeEEech
Confidence            999987 99999999999999999999943210             01233                   8999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      +.++++|+++++++++ ++.++++||.+ .....++++++|||+|+|++|.+++|+|+.+|+..++++++++++.+.+++
T Consensus       127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~  204 (341)
T cd08262         127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA  204 (341)
T ss_pred             HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence            9999999999999887 55688899997 578889999999999889999999999999999668888889999999999


Q ss_pred             cCCceEEcCCCCCCccHHH---HHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH-H
Q 017335          246 FGITDFINPATCGDKTVSQ---VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-I  320 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~---~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~  320 (373)
                      +|++++++++.   .+..+   .+...+.+ ++|++||++|+...+..++++++++ |+++.+|......  ++.... +
T Consensus       205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~  278 (341)
T cd08262         205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESD--NIEPALAI  278 (341)
T ss_pred             cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCC--ccCHHHHh
Confidence            99999998775   32211   34444555 8999999999865588999999997 9999999753322  223322 2


Q ss_pred             hhCcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      .++.++.++....   .+++.++++++++|++.+     +.|+++++++++..
T Consensus       279 ~~~~~~~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~  328 (341)
T cd08262         279 RKELTLQFSLGYT---PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEA  328 (341)
T ss_pred             hcceEEEEEeccc---HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHH
Confidence            3477877654222   467899999999999874     55788888777654

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.6e-37  Score=296.08  Aligned_cols=295  Identities=23%  Similarity=0.273  Sum_probs=249.8

Q ss_pred             eeeEEeecCCCC---eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           16 CKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        16 ~ka~~~~~~~~~---l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      |||+++.+++.+   ++++++|.|.+.++||+|||.++++|++|+..+.|..+... ..|.++|||++|+|+++|+++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~p~~~G~e~~G~V~~~G~~v~~   79 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKP-ELPAIGGSEAVGVVDAVGEGVKG   79 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCCCCCcceEEEEEEeCCCCCC
Confidence            799999887652   78899999999999999999999999999999887654221 56889999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      +++||+|+...                              ..                   |+|++|+.+++..++++|
T Consensus        80 ~~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~ip  110 (324)
T cd08292          80 LQVGQRVAVAP------------------------------VH-------------------GTWAEYFVAPADGLVPLP  110 (324)
T ss_pred             CCCCCEEEecc------------------------------CC-------------------CcceeEEEEchHHeEECC
Confidence            99999998642                              11                   389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++++++.+++...++|.++ +...+++|++|||+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|++++
T Consensus       111 ~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~  188 (324)
T cd08292         111 DGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPV  188 (324)
T ss_pred             CCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEE
Confidence            9999999999988889999865 5688999999999988 9999999999999999 89999889999999888999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      +++++   .++.+.+.+++++ ++|+||||+|+.. ...++++++++ |+++.+|.. ....++++....+. +.++.++
T Consensus       189 ~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~  262 (324)
T cd08292         189 VSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSM-SGEPMQISSGDLIFKQATVRGF  262 (324)
T ss_pred             EcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecC-CCCCCcCCHHHHhhCCCEEEEE
Confidence            98877   7888889888887 9999999999865 88999999997 999999974 23344556554555 8999988


Q ss_pred             ecCCCC-------chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          330 YFGGLK-------PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       330 ~~~~~~-------~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ....+.       ..+.+.++++++.+|++.+   +.|+++++.++++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~  311 (324)
T cd08292         263 WGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAA  311 (324)
T ss_pred             EcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHH
Confidence            654321       1356888999999999873   67888887777653

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-37  Score=294.72  Aligned_cols=299  Identities=21%  Similarity=0.332  Sum_probs=251.8

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++. +++++++.|+++++||+||+.++++|++|+....|..+     +|.++|||++|+|+++|++   +++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC---CCC
Confidence            68999998765 99999999999999999999999999999998877542     5678999999999999987   689


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      ||+|...+...|+.|.+|..|.+++|+....   .++ ..+|                   +|++|+.++.+.++++|++
T Consensus        72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~  129 (319)
T cd08242          72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG-------------------AFAEYLTLPLENLHVVPDL  129 (319)
T ss_pred             CCeEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------------ceEEEEEechHHeEECcCC
Confidence            9999999999999999999999999987543   344 2345                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++++.+ .++.++|. +.+...++++++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.++++|++.+++.
T Consensus       130 ~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~  206 (319)
T cd08242         130 VPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPD  206 (319)
T ss_pred             CCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCc
Confidence            999988864 45667776 5678889999999999889999999999999999 79999999999999999999888876


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      +.   .         +.+ ++|+++||+|....++.++++++++ |+++..+....  ...++...+.. +.++.++..+
T Consensus       207 ~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~  271 (319)
T cd08242         207 EA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG  271 (319)
T ss_pred             cc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc
Confidence            54   1         233 8999999999877789999999997 99998775432  34556655555 8888887543


Q ss_pred             CCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          333 GLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .      +++++++++++++++     +.|+++++.+++..+
T Consensus       272 ~------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~  307 (319)
T cd08242         272 P------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERA  307 (319)
T ss_pred             c------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHH
Confidence            2      788999999999842     778888888876543

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.2e-37  Score=295.01  Aligned_cols=310  Identities=24%  Similarity=0.356  Sum_probs=262.4

Q ss_pred             eeeEEeecCCC----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           16 CKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        16 ~ka~~~~~~~~----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      |||+++.+++.    ++++++.+.|.++++||+||+.++++|++|+..+.|..+..  .+|.++|||++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~   78 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPP--KLPLIPGHEIVGRVEAVGPGVT   78 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCC--CCCccccccccEEEEEECCCCC
Confidence            78999998883    48888888888999999999999999999999988876544  5788999999999999999999


Q ss_pred             ccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           92 EVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        92 ~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      ++++||+|++.+. ..|++|.+|..+.+++|+...+   .|+..+|                   +|++|+.++.+.+++
T Consensus        79 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~  136 (329)
T cd08298          79 RFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYP  136 (329)
T ss_pred             CCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEE
Confidence            9999999987654 6799999999999999987765   5655566                   899999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +|+++++.+++.+++++.|||.++ +..+++++++|||+|+|++|++++++++..|+ +|+++++++++.+.++++|+++
T Consensus       137 lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~  214 (329)
T cd08298         137 IPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADW  214 (329)
T ss_pred             CCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcE
Confidence            999999999999999999999977 88999999999999999999999999999999 9999999999999999999988


Q ss_pred             EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335          251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY  330 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  330 (373)
                      +++.+.   .         .++++|+++++.+....++.++++++++ |+++.+|.... ....++...+..+..+.++.
T Consensus       215 ~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~  280 (329)
T cd08298         215 AGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVA  280 (329)
T ss_pred             EeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEec
Confidence            887754   1         2237999999877777799999999997 99999986322 22234444444477777764


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                      ...   .+.+.+++++++++.+.+  +.|+++++.+|++.
T Consensus       281 ~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~  317 (329)
T cd08298         281 NLT---RQDGEEFLKLAAEIPIKPEVETYPLEEANEALQD  317 (329)
T ss_pred             CCC---HHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHH
Confidence            322   567899999999998875  67788888777654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=4.5e-37  Score=295.74  Aligned_cols=320  Identities=27%  Similarity=0.460  Sum_probs=266.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++++.+. +.+++.+.|+++++||+||+.++++|+.|+..+.+.+..   ..|.++|+|++|+|+++|+++++|++
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~---~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY---HPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC---CCCcccCcceEEEEEEECCCCCcCCC
Confidence            78999999876 999999999999999999999999999999888776522   46788999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|+..+...|+.|.+|..+.+..|+....   .|...+|                   +|++|+.+|++.++++|+++
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lP~~~  134 (343)
T cd08236          77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG-------------------AFAEYVSVPARNLIKIPDHV  134 (343)
T ss_pred             CCEEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------------cccceEEechHHeEECcCCC
Confidence            9999999888999999999999999977532   4444455                   99999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++++ ..+++||.++. ...++++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++++++.+
T Consensus       135 ~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~  212 (343)
T cd08236         135 DYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK  212 (343)
T ss_pred             CHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc
Confidence            99999888 57889999764 77899999999998899999999999999994499999999999999999999999887


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc-ccCHHHHhh-CcEEEEeecC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~~-~~~i~g~~~~  332 (373)
                      .   .. .+.+.+..++ ++|++|||+|....+..++++++++ |+++.+|.......+ ..+...++. +.++.+....
T Consensus       213 ~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (343)
T cd08236         213 E---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNS  287 (343)
T ss_pred             c---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeec
Confidence            6   55 6677777776 7999999998877789999999997 999999975432112 223333344 8888887653


Q ss_pred             CCC--chhHHHHHHHHHHcCCCC-----CCcccccCCCccccc
Q 017335          333 GLK--PRSDIATLAQKYLDKVHL-----RSSFHLCDPNSDSAG  368 (373)
Q Consensus       333 ~~~--~~~~~~~~~~~~~~g~i~-----~~~~~~~~~~~a~~~  368 (373)
                      ...  ..+.+.+++++++++++.     ...++++++.+++..
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  330 (343)
T cd08236         288 YSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFER  330 (343)
T ss_pred             cccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHH
Confidence            321  246788999999999875     256677777666543

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=4.2e-37  Score=296.00  Aligned_cols=321  Identities=30%  Similarity=0.410  Sum_probs=258.5

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||++++.++..+++.+.+.|.|+++|++|||.++++|+.|+..+.+.. ......+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            7899999887669999999999999999999999999999988755432 111014567899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+..+.++|+.|.+|..+.+++|....   ..|...+|                   +|++|++++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~v~v~~~~~~~lP~~  138 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVDTDG-------------------CFAEYVVVPEENLWKNDKD  138 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccc---eEeccCCC-------------------cceEEEEechHHcEECcCC
Confidence            9999999999999999999999999997642   24444445                   8999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      ++++.+ +++.++.+++.++.  ...+++++|||.|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.
T Consensus       139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  215 (341)
T cd05281         139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP  215 (341)
T ss_pred             CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence            998555 55557888887654  456789999999889999999999999998668889889999999999999999987


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (373)
                      +.   .++. .+.+++++ ++|++|||+|+......++++|+++ |+++.+|........++....++++.++.+.....
T Consensus       216 ~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (341)
T cd05281         216 RE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK  290 (341)
T ss_pred             cc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC
Confidence            76   6777 78887776 8999999999877789999999997 99999986433212222222233477777764222


Q ss_pred             CCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                        ..+.+.+++++++++.+.+     +.++++++.+++..
T Consensus       291 --~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~  328 (341)
T cd05281         291 --MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFEL  328 (341)
T ss_pred             --cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHH
Confidence              2466888999999998763     55777777777654

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.6e-37  Score=291.96  Aligned_cols=315  Identities=32%  Similarity=0.485  Sum_probs=263.2

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++..+++.+.++++|.|.+.+++|+|++.++++|++|+..+.|..+..  ..|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~   78 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG--KYPLILGHEIVGTVEEVGEGVERFKP   78 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC--CCCeeccccceEEEEEECCCCccCCC
Confidence            7899998755558999999999999999999999999999999988866544  56789999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|+......|+.|.+|+.+.+++|.+..   ..|....|                   +|++|+.++...++++|+++
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~  136 (332)
T cd08259          79 GDRVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG-------------------GFAEYVKVPERSLVKLPDNV  136 (332)
T ss_pred             CCEEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC-------------------eeeeEEEechhheEECCCCC
Confidence            999999998999999999999999998752   24555555                   99999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      ++++++.+++++.+||.++.. ..+.++++|||+|+ |++|++++++++..|. +|+++.+++++.+.++++|++++++.
T Consensus       137 ~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~  214 (332)
T cd08259         137 SDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDG  214 (332)
T ss_pred             CHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            999999999999999998766 88999999999998 9999999999999999 89999999999999988998888754


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~  333 (373)
                      +    . +.+.+.+..  ++|++++++|... ...++++++++ |+++.+|..... ...++..... ++.++.++..  
T Consensus       215 ~----~-~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--  282 (332)
T cd08259         215 S----K-FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSIS--  282 (332)
T ss_pred             H----H-HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecC--
Confidence            3    2 555555443  7999999999877 88999999997 999999874332 2222333332 3777777642  


Q ss_pred             CCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                       ...+++.+++++++++.+.+   +.|+++++.+++..+
T Consensus       283 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~  320 (332)
T cd08259         283 -ATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDL  320 (332)
T ss_pred             -CCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHH
Confidence             23678999999999998764   667888877776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=6e-37  Score=293.26  Aligned_cols=314  Identities=28%  Similarity=0.429  Sum_probs=263.8

Q ss_pred             eeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCC
Q 017335           17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER   96 (373)
Q Consensus        17 ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   96 (373)
                      ||+++.+++..+++++.|.|.+.+++|+|++.++++|++|+..+.+.....  .+|.++|||++|+|+++|++++++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~~g~~~~~~~~G   78 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGS--KYPLVPGHEIVGEVVEVGAGVEGRKVG   78 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCC--CCCcccCccceEEEEEECCCCcccccC
Confidence            689999986569999999999999999999999999999999888776443  567899999999999999999999999


Q ss_pred             CEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           97 DLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        97 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      |+|++.+. .+|+.|.+|+++.+++|++..+   .++..+|                   +|++|+.++.+.++++|+++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~  136 (330)
T cd08245          79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGL  136 (330)
T ss_pred             CEEEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCC
Confidence            99987654 6799999999999999999654   4444445                   89999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++++.+.+...+||.++.. ..++++++|||+|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++..
T Consensus       137 ~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  214 (330)
T cd08245         137 PLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG  214 (330)
T ss_pred             CHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC
Confidence            999999999999999997644 789999999999888899999999999999 899999999999999999999888776


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL  334 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  334 (373)
                      .   .+....    ..+++|+++|+++.......++++++++ |+++.+|..... ...+....+.. +.++.++..+. 
T Consensus       215 ~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-  284 (330)
T cd08245         215 A---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG-  284 (330)
T ss_pred             C---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC-
Confidence            5   333222    2247999999988777789999999997 999999864332 22333444555 88888886544 


Q ss_pred             CchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          335 KPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       335 ~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                        ...++++++++.++.+.+  +.|+++++.+++..
T Consensus       285 --~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~  318 (330)
T cd08245         285 --RADLQEALDFAAEGKVKPMIETFPLDQANEAYER  318 (330)
T ss_pred             --HHHHHHHHHHHHcCCCcceEEEEcHHHHHHHHHH
Confidence              577889999999998864  67777777776654

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=9.9e-37  Score=292.09  Aligned_cols=315  Identities=27%  Similarity=0.457  Sum_probs=265.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++. +++.+.+.|+++++||+||+.++++|+.|+....|..+.   .+|.++|+|++|+|+.+|++++++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCCCCCC
Confidence            78999998886 999999999999999999999999999999988876543   46789999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||+|+......|+.|.+|..+++++|++...   .|...+|                   +|++|+.++.+.++++|+++
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~  134 (334)
T cd08234          77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNL  134 (334)
T ss_pred             CCEEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCC
Confidence            9999998888999999999999999988753   4444556                   89999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++.+++.+ ..+.+++.++ +...++++++|||+|+|.+|++++++|+..|++.|+++++++++.+.++++|++++++.+
T Consensus       135 ~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~  212 (334)
T cd08234         135 SFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS  212 (334)
T ss_pred             CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC
Confidence            99998876 6888999876 788999999999998899999999999999994489999999999999999998888877


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      .   .++...  ..+.+ ++|++||+++....+..++++++++ |+++.+|........+++...+.. ++++.+.... 
T Consensus       213 ~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  285 (334)
T cd08234         213 R---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-  285 (334)
T ss_pred             C---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-
Confidence            6   455444  33444 8999999998777789999999997 999999875443344556555554 7888877532 


Q ss_pred             CCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                         .+.+++++++++++++.+     +.|+++++.+++..
T Consensus       286 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  322 (334)
T cd08234         286 ---PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEG  322 (334)
T ss_pred             ---HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHH
Confidence               467899999999999864     44667776666544

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=6.4e-37  Score=294.23  Aligned_cols=310  Identities=24%  Similarity=0.402  Sum_probs=250.1

Q ss_pred             EeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhccc-CCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCE
Q 017335           20 ICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL   98 (373)
Q Consensus        20 ~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~   98 (373)
                      ++++++. +++++.+.|.++++||+|||.++++|++|+..+. +........+|.++|||++|+|+++|++|++|++||+
T Consensus         2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            4666666 9999999999999999999999999999988764 3221111135778999999999999999999999999


Q ss_pred             EEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-----CCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           99 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        99 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-----~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      |++.+..+|++|.+|..|..+.|.++.+   .+.     ..+|                   +|++|+.++.+.++++|+
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~g-------------------~~~~~v~v~~~~~~~iP~  138 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRFPHVQG-------------------GFREYLVVDASQCVPLPD  138 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccc---eeeccccCCCCC-------------------ceeeEEEechHHeEECcC
Confidence            9999999999999999999999998643   221     1234                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++++. ..+++++|.++.+.... ++++|||.|+|.+|++++++|+.+|+.+|+++++++++.++++++|++++++
T Consensus       139 ~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~  216 (339)
T cd08232         139 GLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVN  216 (339)
T ss_pred             CCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEc
Confidence            999999876 46888999876555455 9999999988999999999999999867999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcC--CCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          254 PATCGDKTVSQVIKEMTD--GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      .+.   .++    .++..  +++|+++|+.|....++.++++|+++ |+++.+|...  ...+.+...++. ++++.+..
T Consensus       217 ~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~  286 (339)
T cd08232         217 LAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSF  286 (339)
T ss_pred             CCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEe
Confidence            875   332    22222  26999999999766689999999997 9999998643  233444444444 78887764


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      .    ..+.+.+++++++++++.+     +.|+++++++++..
T Consensus       287 ~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~  325 (339)
T cd08232         287 R----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFAL  325 (339)
T ss_pred             c----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHH
Confidence            2    2467899999999998853     55778887776544

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2.4e-36  Score=290.63  Aligned_cols=314  Identities=25%  Similarity=0.393  Sum_probs=255.9

Q ss_pred             ecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCccCCCCEEE
Q 017335           22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL  100 (373)
Q Consensus        22 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  100 (373)
                      +.+++++++++.|.|.|+++||+||+.++++|++|...+.+.... ....+|.++|||++|+|+++|+++++|++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            456777999999999999999999999999999999876554211 1114577899999999999999999999999999


Q ss_pred             eeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhh
Q 017335          101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  180 (373)
Q Consensus       101 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~a  180 (373)
                      ..+...|+.|..|..+.+++|++.+.   .|+..+|                   +|++|+.++++.++++|++++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~a  142 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------CFAEYAVVPAQNIWKNPKSIPPEYA  142 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcce---EeecCCC-------------------cceeEEEeehHHcEECcCCCChHhh
Confidence            99999999999999999999999753   3444455                   8999999999999999999998655


Q ss_pred             hccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCc
Q 017335          181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       181 a~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~  260 (373)
                       +++.++.+|+.++  ...++++++|+|.|+|++|.+++++|+.+|++.|+++++++++.+.++++|++++++...   .
T Consensus       143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~  216 (340)
T TIGR00692       143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E  216 (340)
T ss_pred             -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence             4666888888865  345789999999888999999999999999944889988899999999999999998876   7


Q ss_pred             cHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH-HHhh-CcEEEEeecCCCCch
Q 017335          261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILK-GRSVCGTYFGGLKPR  337 (373)
Q Consensus       261 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~~~i~g~~~~~~~~~  337 (373)
                      ++.+.+.+++++ ++|++|||+|+...+..++++++++ |+++.+|....  ..+++.. .+.. ++++.+...  ....
T Consensus       217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~  291 (340)
T TIGR00692       217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG--KVTIDFTNKVIFKGLTIYGITG--RHMF  291 (340)
T ss_pred             CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC--CcccchhhhhhhcceEEEEEec--CCch
Confidence            788888888776 8999999999877789999999997 99999997532  2233322 3333 777776542  1224


Q ss_pred             hHHHHHHHHHHcCCCC-----CCcccccCCCccccc
Q 017335          338 SDIATLAQKYLDKVHL-----RSSFHLCDPNSDSAG  368 (373)
Q Consensus       338 ~~~~~~~~~~~~g~i~-----~~~~~~~~~~~a~~~  368 (373)
                      +.+.++++++++++++     .+.|+++++.+++..
T Consensus       292 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~  327 (340)
T TIGR00692       292 ETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFEL  327 (340)
T ss_pred             hhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHH
Confidence            6688999999999986     266777777766543

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.6e-36  Score=291.01  Aligned_cols=309  Identities=23%  Similarity=0.271  Sum_probs=248.3

Q ss_pred             eeeEEeecCCCC--eEEEE-EecCCCCCCeEEEEEeeeeccccchhcccCCCCC------------------CCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEE-IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------PKLPLPVI   74 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~-~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~------------------~~~~~p~~   74 (373)
                      |||+++..++.+  +.+.+ .+.|++.+++|+|||.++++|++|+..+.|..+.                  ....+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688998876542  55654 4777789999999999999999999988775431                  01257889


Q ss_pred             ccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccc
Q 017335           75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNI  154 (373)
Q Consensus        75 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~  154 (373)
                      +|||++|+|+++|+++++|++||+|++.+...|+.|..|..     |.      ..|...+|                  
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~------~~~~~~~g------------------  131 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID------YIGSERDG------------------  131 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc------ccCCCCCc------------------
Confidence            99999999999999999999999999988888888766532     11      02222234                  


Q ss_pred             cceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE
Q 017335          155 SSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV  233 (373)
Q Consensus       155 g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~  233 (373)
                       +|++|+.++.+.++++|+++++.+++.+++.+.|||.++ ....++++++|||+|+ |++|++++++|+.+|+ +|+++
T Consensus       132 -~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~  208 (350)
T cd08274         132 -GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV  208 (350)
T ss_pred             -cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence             899999999999999999999999999999999999965 7788999999999998 9999999999999999 78888


Q ss_pred             cCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc
Q 017335          234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP  312 (373)
Q Consensus       234 ~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~  312 (373)
                      ++++ +.+.++++|++.+++...   ..+.+  ...+.+ ++|++||++|+.. ++.++++++++ |+++.+|.. ....
T Consensus       209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~-~~~~  279 (350)
T cd08274         209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAI-AGPV  279 (350)
T ss_pred             eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEeccc-CCcc
Confidence            8665 888889999987766544   33333  445555 8999999999865 89999999997 999999864 2223


Q ss_pred             cccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          313 ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       313 ~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      .+++...++. ++++.++....   .+.+.++++++.++++++   +.|+++++.++++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~  336 (350)
T cd08274         280 VELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAE  336 (350)
T ss_pred             ccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHH
Confidence            4667766555 89999887543   578999999999998764   67787777776654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=291.80  Aligned_cols=297  Identities=20%  Similarity=0.235  Sum_probs=237.3

Q ss_pred             ccceeeEEeec-C-CC----CeEEEEE---ecCC-CCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccC--ccc
Q 017335           13 VIRCKAAICRI-P-GK----PLVIEEI---EVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH--EAV   80 (373)
Q Consensus        13 ~~~~ka~~~~~-~-~~----~l~~~~~---~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~--e~~   80 (373)
                      +.+.|.+++.. + +.    .+++++.   +.|. +++|||||||.++++|+.|...+.+.....  ..|+++|+  |++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~--~~p~~~G~~~~~~   83 (348)
T PLN03154          6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSY--LPPFVPGQRIEGF   83 (348)
T ss_pred             cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCC--CCCcCCCCeeEee
Confidence            34467788853 2 11    1777774   5553 579999999999999999876544322222  35789998  889


Q ss_pred             EEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeee
Q 017335           81 GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY  160 (373)
Q Consensus        81 G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~  160 (373)
                      |+|..+|+++++|++||+|+..                                                    ++|+||
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey  111 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEY  111 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEE
Confidence            9999999999999999999632                                                    279999


Q ss_pred             EEeeccc--eEE--cCCCCChh-hhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc
Q 017335          161 SVVDITH--VVK--ITPHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD  234 (373)
Q Consensus       161 ~~v~~~~--~~~--lP~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~  234 (373)
                      +.++.+.  +.+  +|++++++ ++++++++++|||+++.+...+++|++|||+|+ |++|++++|+||.+|+ +|++++
T Consensus       112 ~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~  190 (348)
T PLN03154        112 SLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSA  190 (348)
T ss_pred             EEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEc
Confidence            9998753  544  59999986 688899999999998878889999999999998 9999999999999999 899999


Q ss_pred             CChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc
Q 017335          235 INPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI  313 (373)
Q Consensus       235 ~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~  313 (373)
                      +++++.+.++ ++|+++++++++  ..++.+.+++.+++++|++||++|+. .+..++++++++ |+++.+|..... ..
T Consensus       191 ~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~  265 (348)
T PLN03154        191 GSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLN-SL  265 (348)
T ss_pred             CCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccC-CC
Confidence            9999999987 799999999864  13677788877766899999999976 499999999997 999999974322 11


Q ss_pred             -----ccCHHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          314 -----SLNSIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       314 -----~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                           .++...++. ++++.|+..+.+.  ..+.++++++++++|++++   ..|+++++++|+..+
T Consensus       266 ~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l  332 (348)
T PLN03154        266 SASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGL  332 (348)
T ss_pred             CCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHH
Confidence                 124445555 8999998654332  1356888999999999987   579999999998754

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3e-36  Score=289.79  Aligned_cols=296  Identities=21%  Similarity=0.211  Sum_probs=237.2

Q ss_pred             eeeEEeecCCC-CeEEEEEec----CCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcc--cEEEEEeCC
Q 017335           16 CKAAICRIPGK-PLVIEEIEV----EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA--VGVVESVGE   88 (373)
Q Consensus        16 ~ka~~~~~~~~-~l~~~~~~~----p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~vG~   88 (373)
                      +|+++...+.. .|++++.+.    |+|+++||||||.+++||+.|++.+.|.+.... ..|+++|++.  .|++..+|+
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~-~~p~~~g~~~~g~~~~~~v~~   86 (338)
T cd08295           8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLY-LPPFKPGEVITGYGVAKVVDS   86 (338)
T ss_pred             EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcccc-CCCcCCCCeEeccEEEEEEec
Confidence            56666555443 389999887    889999999999999999999998887543211 4678899754  456666888


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-cc
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-TH  167 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~  167 (373)
                      .+++|++||+|+..                                                    |+|+||+.+|+ ..
T Consensus        87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~  114 (338)
T cd08295          87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD  114 (338)
T ss_pred             CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence            88899999999632                                                    27999999999 89


Q ss_pred             eEEcC-CCCChh-hhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          168 VVKIT-PHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       168 ~~~lP-~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      ++++| +++++. +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus       115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~  193 (338)
T cd08295         115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK  193 (338)
T ss_pred             eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            99995 678887 788899999999998878889999999999998 9999999999999999 8999999999999999


Q ss_pred             H-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc----cccCHHH
Q 017335          245 K-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP----ISLNSIE  319 (373)
Q Consensus       245 ~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~----~~~~~~~  319 (373)
                      + +|+++++++++  ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++.+|.......    ...+...
T Consensus       194 ~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~  269 (338)
T cd08295         194 NKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLN  269 (338)
T ss_pred             HhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHH
Confidence            8 99999998654  146777787776568999999999854 89999999997 99999986432211    0123344


Q ss_pred             Hhh-CcEEEEeecCCCCc--hhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          320 ILK-GRSVCGTYFGGLKP--RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       320 ~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++. ++++.++.......  .+.+.++++++++|++++   ..|+++++.+|+..+
T Consensus       270 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~  325 (338)
T cd08295         270 IIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGL  325 (338)
T ss_pred             HhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHH
Confidence            444 78888865544321  345788999999999875   668999988887553

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.7e-35  Score=282.87  Aligned_cols=288  Identities=19%  Similarity=0.193  Sum_probs=231.3

Q ss_pred             ceeeEEeecC--CCC----eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           15 RCKAAICRIP--GKP----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        15 ~~ka~~~~~~--~~~----l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      .|||+++.++  +.+    +++++.+.|+|+++||||||.+++||+.|......   ..  .+|.++|+|++|+|++   
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~--~~p~v~G~e~~G~V~~---   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LN--EGDTMIGTQVAKVIES---   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CC--CCCcEecceEEEEEec---
Confidence            5899999983  332    88999999999999999999999999887542211   11  4678999999999995   


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--  166 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--  166 (373)
                      .+++|++||||+..                                                    ++|++|+.++.+  
T Consensus        74 ~~~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~  101 (329)
T cd08294          74 KNSKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQ  101 (329)
T ss_pred             CCCCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccc
Confidence            44679999999742                                                    168999999999  


Q ss_pred             -ceEEcCCCCC--h---hhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          167 -HVVKITPHIP--L---GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       167 -~~~~lP~~l~--~---~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                       .++++|++++  +   ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus       102 ~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~  180 (329)
T cd08294         102 PDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDK  180 (329)
T ss_pred             cceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHH
Confidence             9999999988  2   2334677899999998888889999999999997 9999999999999999 89999999999


Q ss_pred             HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCC---c--cc
Q 017335          240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---P--IS  314 (373)
Q Consensus       240 ~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~---~--~~  314 (373)
                      .++++++|+++++++++   .++.+.+.+.+++++|++||++|+.. +..++++++++ |+++.+|......   .  ..
T Consensus       181 ~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~  255 (329)
T cd08294         181 VAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGP  255 (329)
T ss_pred             HHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCc
Confidence            99999999999999887   78888888877668999999999855 89999999997 9999998532211   1  11


Q ss_pred             cCHHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          315 LNSIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       315 ~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      .....++. ++++.++......  ..+.+.++++++++|++++   ..|+++++.+|+..
T Consensus       256 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~  315 (329)
T cd08294         256 YVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIG  315 (329)
T ss_pred             ccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHH
Confidence            22223344 8888887544321  1245778999999999875   56788888877654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.8e-35  Score=282.90  Aligned_cols=277  Identities=21%  Similarity=0.236  Sum_probs=224.7

Q ss_pred             eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCC
Q 017335           28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC  107 (373)
Q Consensus        28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c  107 (373)
                      +++++.+.|+|++|||||||.++++|+.|..   |.+...  ..|.++|.|++|+|+++|+   +|++||||+..     
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~--~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-----   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK--EGDTMMGQQVARVVESKNV---ALPKGTIVLAS-----   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC--CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----
Confidence            8899999999999999999999999996543   333222  3578999999999999874   59999999742     


Q ss_pred             CCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc----CCCCChhhh-hc
Q 017335          108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI----TPHIPLGIA-CL  182 (373)
Q Consensus       108 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l----P~~l~~~~a-a~  182 (373)
                                                                     ++|++|+.++.+++.++    |++++++++ ++
T Consensus        86 -----------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~  118 (325)
T TIGR02825        86 -----------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGT  118 (325)
T ss_pred             -----------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHh
Confidence                                                           16899999999998888    899999997 67


Q ss_pred             cchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCcc
Q 017335          183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  261 (373)
Q Consensus       183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~  261 (373)
                      +++++.|||+++.+...+++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.++++|+++++++++  ..+
T Consensus       119 l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~  195 (325)
T TIGR02825       119 VGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKS  195 (325)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--ccc
Confidence            88899999998888899999999999997 9999999999999999 8999999999999999999999999875  124


Q ss_pred             HHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---Cccc--cCHHHHhh-CcEEEEeecCCCC
Q 017335          262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---SPIS--LNSIEILK-GRSVCGTYFGGLK  335 (373)
Q Consensus       262 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---~~~~--~~~~~~~~-~~~i~g~~~~~~~  335 (373)
                      +.+.++..+++++|++||++|+.. +..++++++++ |+++.+|.....   ...+  .....+.. ++++.++....+.
T Consensus       196 ~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  273 (325)
T TIGR02825       196 LEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQ  273 (325)
T ss_pred             HHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhh
Confidence            556666665558999999999876 89999999997 999999964321   1112  12333344 7888887644322


Q ss_pred             ---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          336 ---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       336 ---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                         ..+.+.++++++++|++++   ..|+++++.+|+..+
T Consensus       274 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~  313 (325)
T TIGR02825       274 GEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGM  313 (325)
T ss_pred             hhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHH
Confidence               1356889999999999986   667888888887653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.3e-35  Score=285.91  Aligned_cols=283  Identities=19%  Similarity=0.170  Sum_probs=219.8

Q ss_pred             eEEEEEecCCCC-CCeEEEEEeeeeccccchhccc---CCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeC
Q 017335           28 LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF  103 (373)
Q Consensus        28 l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~---g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  103 (373)
                      +++++.|.|+|. ++||||||.++|||+.|.....   +.....  .+|.++|||++|+|+++|+++++|++||+|+...
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  100 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLA--PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN  100 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCC--CccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence            888999999875 9999999999999998853222   111112  4678999999999999999999999999997421


Q ss_pred             CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhh----
Q 017335          104 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI----  179 (373)
Q Consensus       104 ~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~----  179 (373)
                                                                         ++|+||+++|++.++++|+++++.+    
T Consensus       101 ---------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~  129 (345)
T cd08293         101 ---------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYF  129 (345)
T ss_pred             ---------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHH
Confidence                                                               1799999999999999999864432    


Q ss_pred             hhccchhhhhHHHHHHHHhCCCCC--CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCC
Q 017335          180 ACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPA  255 (373)
Q Consensus       180 aa~l~~~~~ta~~~~~~~~~~~~~--~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~  255 (373)
                      +++++.++.|||+++.+...++++  ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|++++++++
T Consensus       130 ~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~  209 (345)
T cd08293         130 LGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK  209 (345)
T ss_pred             hhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC
Confidence            445677899999988778888877  99999998 9999999999999998679999999999999876 9999999988


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---Ccc--ccC--HHHHhh--CcEE
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---SPI--SLN--SIEILK--GRSV  326 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---~~~--~~~--~~~~~~--~~~i  326 (373)
                      +   .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|.....   ...  .++  ...+..  ++++
T Consensus       210 ~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (345)
T cd08293         210 T---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITR  284 (345)
T ss_pred             C---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEE
Confidence            7   78888888887668999999999876 79999999997 999999853211   111  111  112222  4443


Q ss_pred             EEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          327 CGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       327 ~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      .+.......  ..+.++++++++++|++++   ..++++++.+|++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~  331 (345)
T cd08293         285 ERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQS  331 (345)
T ss_pred             EEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHH
Confidence            333222211  1245778889999999976   34578888887654

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=3.2e-35  Score=282.52  Aligned_cols=298  Identities=22%  Similarity=0.266  Sum_probs=245.0

Q ss_pred             eeeEEeecCCCC---eEEEEEecCCCCC-CeEEEEEeeeeccccchhcccCCCCCCCC---CCCccccCcccEEEEEeCC
Q 017335           16 CKAAICRIPGKP---LVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKSSTDLPKL---PLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        16 ~ka~~~~~~~~~---l~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~vG~   88 (373)
                      |||+++..++++   +.+++.|.|.|.+ ++|+||+.++|+|++|+..+.|..+....   .+|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            899999988764   8999999998887 99999999999999999988876543210   1677999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      ++..|++||+|+....                             .+                   |+|++|+.++.+.+
T Consensus        81 ~v~~~~~Gd~V~~~~~-----------------------------~~-------------------g~~~~~~~v~~~~~  112 (341)
T cd08290          81 GVKSLKPGDWVIPLRP-----------------------------GL-------------------GTWRTHAVVPADDL  112 (341)
T ss_pred             CCCCCCCCCEEEecCC-----------------------------CC-------------------ccchheEeccHHHe
Confidence            9999999999986421                             12                   38999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hHHHHH
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIG  243 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~----~~~~~~  243 (373)
                      +++|+++++++++.+++.+.|||.++.+...++++++|||+|+ |++|++++++|+..|+ +|+++.+++    ++.+.+
T Consensus       113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~  191 (341)
T cd08290         113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL  191 (341)
T ss_pred             EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence            9999999999999999999999998877788999999999988 9999999999999999 788887765    678888


Q ss_pred             HHcCCceEEcCCCCCCc---cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH
Q 017335          244 KKFGITDFINPATCGDK---TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI  320 (373)
Q Consensus       244 ~~lga~~vi~~~~~~~~---~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~  320 (373)
                      +++|++++++++.   .   ++...+..+.++++|++|||+|+.. +..++++++++ |+++.+|.... ....++...+
T Consensus       192 ~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~  265 (341)
T cd08290         192 KALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLL  265 (341)
T ss_pred             HhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHH
Confidence            8999999998875   4   6777777776558999999999876 77899999997 99999986432 2345555444


Q ss_pred             hh-CcEEEEeecCCCC---c----hhHHHHHHHHHHcCCCCC---Ccc---cccCCCccccc
Q 017335          321 LK-GRSVCGTYFGGLK---P----RSDIATLAQKYLDKVHLR---SSF---HLCDPNSDSAG  368 (373)
Q Consensus       321 ~~-~~~i~g~~~~~~~---~----~~~~~~~~~~~~~g~i~~---~~~---~~~~~~~a~~~  368 (373)
                      +. +.++.+.......   .    ...+.++++++.+|++.+   ..+   +++++.+++..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~  327 (341)
T cd08290         266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALAN  327 (341)
T ss_pred             hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHH
Confidence            44 8999988654321   0    135888999999998875   445   77777776554

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.9e-34  Score=274.44  Aligned_cols=315  Identities=23%  Similarity=0.275  Sum_probs=257.0

Q ss_pred             eeeEEeecCC--CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++...+  +.+++++.+.|.++++|++|++.++++|++|+....|..+... ..|.++|||++|+|+++|+.++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~   79 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPV-KDPLIPLSDGAGEVVAVGEGVTRF   79 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCC-CCCcccccceeEEEEEeCCCCcCC
Confidence            7999999664  3388888888889999999999999999999998887654332 467889999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|++.....|+.+.      ++.|....   ..|...+|                   +|++|+.++.+.++++|+
T Consensus        80 ~~Gd~V~~~~~~~~~~~~------~~~~~~~~---~~~~~~~g-------------------~~~~~~~~~~~~~~~lp~  131 (336)
T cd08276          80 KVGDRVVPTFFPNWLDGP------PTAEDEAS---ALGGPIDG-------------------VLAEYVVLPEEGLVRAPD  131 (336)
T ss_pred             CCCCEEEEeccccccccc------cccccccc---ccccccCc-------------------eeeeEEEecHHHeEECCC
Confidence            999999987766554433      33443221   13333345                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++.+++.+.+.+.+||.++.+...++++++|+|+|.|++|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus       132 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~  210 (336)
T cd08276         132 HLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVIN  210 (336)
T ss_pred             CCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEc
Confidence            999999999999999999988777889999999999889999999999999999 8999999999999999999999988


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      .+.  +.++.+.+...+++ ++|+++|+++... +..++++++++ |+++.+|..... ..+.....++. ++++.+...
T Consensus       211 ~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  285 (336)
T cd08276         211 YRT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAV  285 (336)
T ss_pred             CCc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEec
Confidence            653  14577788888876 8999999998655 88999999997 999999974332 22344445455 999998876


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      +.   .+.+.+++++++++.+.+   +.|+++++++++..
T Consensus       286 ~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~  322 (336)
T cd08276         286 GS---RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRY  322 (336)
T ss_pred             Cc---HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHH
Confidence            54   578999999999887754   66777777776543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=9.7e-35  Score=278.52  Aligned_cols=293  Identities=18%  Similarity=0.186  Sum_probs=234.2

Q ss_pred             eeEEeecC---CCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           17 KAAICRIP---GKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        17 ka~~~~~~---~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      ||+++..+   +.+  +++.++|.|+|+++||+|||.++++|+.|...+.+..+..  .+|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~   78 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA--GQPKILGWDAAGVVVAVGDEVT   78 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC--CCCcccceeeEEEEEEeCCCCC
Confidence            57778775   433  8888999999999999999999999999998887765443  5688999999999999999999


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      +|++||+|+...                           +...+|                   +|++|+.++++.++++
T Consensus        79 ~~~~Gd~V~~~~---------------------------~~~~~g-------------------~~~~~~~v~~~~~~~i  112 (336)
T TIGR02817        79 LFKPGDEVWYAG---------------------------DIDRPG-------------------SNAEFHLVDERIVGHK  112 (336)
T ss_pred             CCCCCCEEEEcC---------------------------CCCCCC-------------------cccceEEEcHHHcccC
Confidence            999999997531                           011223                   8999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCC-----CCEEEEECC-ChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~-----~~~VlI~G~-G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~  244 (373)
                      |+++++++++.+++...|||.++....++++     +++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++
T Consensus       113 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~  191 (336)
T TIGR02817       113 PKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVL  191 (336)
T ss_pred             CCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHH
Confidence            9999999999999999999998878888877     999999997 99999999999998 99 9999999999999999


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-C
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-G  323 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~  323 (373)
                      ++|+++++++..    ++.+.+.+..++++|+++|++++...+...+++++++ |+++.++..     ..++...+.. +
T Consensus       192 ~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~  261 (336)
T TIGR02817       192 ELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKS  261 (336)
T ss_pred             HcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcc
Confidence            999999998643    5677777754448999999987766689999999997 999988532     1334444444 5


Q ss_pred             cEEEEeecCCC--Cc-------hhHHHHHHHHHHcCCCCC---Cccc---ccCCCccccc
Q 017335          324 RSVCGTYFGGL--KP-------RSDIATLAQKYLDKVHLR---SSFH---LCDPNSDSAG  368 (373)
Q Consensus       324 ~~i~g~~~~~~--~~-------~~~~~~~~~~~~~g~i~~---~~~~---~~~~~~a~~~  368 (373)
                      .++.+..+...  ..       .+.+.++++++.++++++   +.++   ++++.+|+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~  321 (336)
T TIGR02817       262 ISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHAL  321 (336)
T ss_pred             eEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHH
Confidence            77665433211  00       145788999999998865   3333   4556665543

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-34  Score=274.35  Aligned_cols=296  Identities=21%  Similarity=0.237  Sum_probs=243.2

Q ss_pred             ceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        15 ~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      ||||+++..++..  +++++.+.|++.++||+|||.++++|+.|.....+..+... ..|.++|||++|+|+++|+++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~   79 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPP-GSSEILGLEVAGYVEDVGSDVKR   79 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccceeeEEEEEEeCCCCCC
Confidence            6999999987752  67778888889999999999999999999988877543221 45678999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      +++||+|+...                              .+                   |+|++|+.++.+.++++|
T Consensus        80 ~~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip  110 (334)
T PTZ00354         80 FKEGDRVMALL------------------------------PG-------------------GGYAEYAVAHKGHVMHIP  110 (334)
T ss_pred             CCCCCEEEEec------------------------------CC-------------------CceeeEEEecHHHcEeCC
Confidence            99999997531                              11                   389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++++++.+..++.+||.++.+...++++++|+|+|+ |++|++++++|+.+|+ +++.+.+++++.+.++++|++++
T Consensus       111 ~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  189 (334)
T PTZ00354        111 QGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIIL  189 (334)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence            999999999999999999998877788999999999997 9999999999999999 77778889999999999999999


Q ss_pred             EcCCCCCCcc-HHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh-CcEEE
Q 017335          252 INPATCGDKT-VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-GRSVC  327 (373)
Q Consensus       252 i~~~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~i~  327 (373)
                      ++...   .+ +.+.+.+.+++ ++|++||++++.. +..++++++++ |+++.+|...+ ..+. ++...++. +.++.
T Consensus       190 ~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~  263 (334)
T PTZ00354        190 IRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASII  263 (334)
T ss_pred             EecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEE
Confidence            98765   44 77788888766 8999999998755 88999999997 99999986433 2222 66665555 66888


Q ss_pred             EeecCCCCc-------hhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335          328 GTYFGGLKP-------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA  367 (373)
Q Consensus       328 g~~~~~~~~-------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~  367 (373)
                      ++.......       .+.+.+++++++++.+.+   +.++++++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  313 (334)
T PTZ00354        264 FSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHT  313 (334)
T ss_pred             eeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHH
Confidence            876554221       133577889999998764   6677776666543

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=4.5e-34  Score=272.05  Aligned_cols=298  Identities=19%  Similarity=0.225  Sum_probs=245.4

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC-CCCCCccccCcccEEEEEeCCCCCc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      |||+++++++.+  +++.+.+.|.+.+++|+|++.++++|++|+....|..+.. ....|.++|||++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            789999876543  6677777777899999999999999999998887754321 1156788999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      +++||+|+....                            ..+                   |+|++|+.++.+.++++|
T Consensus        81 ~~~Gd~V~~~~~----------------------------~~~-------------------g~~~~~~~v~~~~~~~lp  113 (324)
T cd08244          81 AWLGRRVVAHTG----------------------------RAG-------------------GGYAELAVADVDSLHPVP  113 (324)
T ss_pred             CCCCCEEEEccC----------------------------CCC-------------------ceeeEEEEEchHHeEeCC
Confidence            999999986421                            012                   389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++++++.+++.+.|||. +.+...++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++++
T Consensus       114 ~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  191 (324)
T cd08244         114 DGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA  191 (324)
T ss_pred             CCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            99999999999999999965 678888999999999997 9999999999999999 89999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      ++.+.   .++.+.+.+.+++ ++|+++|++|+.. ...++++++++ |+++.+|..... ..+++...++. ++++.+.
T Consensus       192 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08244         192 VDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGE-WTALDEDDARRRGVTVVGL  265 (324)
T ss_pred             EecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCC-CCccCHHHHhhCCcEEEEe
Confidence            98876   6788888888776 8999999999876 78999999997 999999875432 23555444445 8898887


Q ss_pred             ecCCCCc---hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          330 YFGGLKP---RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       330 ~~~~~~~---~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      .......   .+.+.+++++++++++..   ..|+++++.++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~  310 (324)
T cd08244         266 LGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAA  310 (324)
T ss_pred             ecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHH
Confidence            6544321   356788999999998754   67788887777643

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.4e-34  Score=274.95  Aligned_cols=296  Identities=20%  Similarity=0.188  Sum_probs=240.0

Q ss_pred             ceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        15 ~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      +||++++.+++.+  +++++++.|+|+++||+||+.++|+|++|+....+.++..  .+|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~vG~~v~~   78 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP--SLPSGLGTEAAGVVSKVGSGVKH   78 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC--CCCCccCcceEEEEEEeCCCCCC
Confidence            5899999987664  8899999999999999999999999999999888776544  56789999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      +++||+|+....                             ..                   |+|++|+.++.+.++++|
T Consensus        79 ~~~Gd~V~~~~~-----------------------------~~-------------------g~~~~~v~v~~~~~~~lp  110 (327)
T PRK10754         79 IKVGDRVVYAQS-----------------------------AL-------------------GAYSSVHNVPADKAAILP  110 (327)
T ss_pred             CCCCCEEEECCC-----------------------------CC-------------------cceeeEEEcCHHHceeCC
Confidence            999999974210                             11                   389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++++++.+++...+||.++.+...++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++++
T Consensus       111 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~  189 (327)
T PRK10754        111 DAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQV  189 (327)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEE
Confidence            999999999988899999998777788999999999976 9999999999999999 89999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE--E
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV--C  327 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i--~  327 (373)
                      ++.+.   .++.+.+.+.+++ ++|++|||+|+.. ....+++++++ |+++.+|.... ....++...+.. +...  .
T Consensus       190 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~  263 (327)
T PRK10754        190 INYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTR  263 (327)
T ss_pred             EcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEec
Confidence            98876   7788888888887 8999999999755 88899999997 99999997432 122233333323 2111  1


Q ss_pred             EeecCCCCch----hHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335          328 GTYFGGLKPR----SDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA  367 (373)
Q Consensus       328 g~~~~~~~~~----~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~  367 (373)
                      ....+...+.    +.+.++++++++|++.+     +.|+++++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~  312 (327)
T PRK10754        264 PSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHE  312 (327)
T ss_pred             ceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHH
Confidence            1110111112    23566889999998863     6788888877654

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=7.2e-34  Score=271.69  Aligned_cols=295  Identities=23%  Similarity=0.225  Sum_probs=241.9

Q ss_pred             ceeeEEeecCCC----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           15 RCKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        15 ~~ka~~~~~~~~----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      .|||+++.+++.    ++++++++.|.+.++||+|||.++++|++|+....|...... .+|.++|||++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~-~~p~~~g~e~~G~v~~vG~~v   79 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGV-KPPFDCGFEGVGEVVAVGEGV   79 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCC-CCCcccCceeEEEEEEECCCC
Confidence            499999998665    488999999999999999999999999999998877654322 678899999999999999999


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +++++||+|+....                                                  |+|++|+.++.+.+++
T Consensus        80 ~~~~~Gd~V~~~~~--------------------------------------------------g~~~s~~~v~~~~~~~  109 (329)
T cd08250          80 TDFKVGDAVATMSF--------------------------------------------------GAFAEYQVVPARHAVP  109 (329)
T ss_pred             CCCCCCCEEEEecC--------------------------------------------------cceeEEEEechHHeEE
Confidence            99999999986421                                                  3899999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      +|++  +.+++.++..+.|||.++.+...++++++|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|++
T Consensus       110 ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~  186 (329)
T cd08250         110 VPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCD  186 (329)
T ss_pred             CCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCc
Confidence            9997  35677888899999998877788999999999997 9999999999999999 899999999999999999998


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---------CccccCHHHH
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---------SPISLNSIEI  320 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---------~~~~~~~~~~  320 (373)
                      ++++.+.   .++.+.+....++++|++||++|+.. +..++++++++ |+++.+|.....         ....++...+
T Consensus       187 ~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  261 (329)
T cd08250         187 RPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLL  261 (329)
T ss_pred             eEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHh
Confidence            8988776   66766676665458999999999754 89999999997 999999864321         1112333333


Q ss_pred             hhCcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335          321 LKGRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG  368 (373)
Q Consensus       321 ~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~  368 (373)
                      .++.++.++.+....  ..+.+.+++++++++.+.+     +.++++++++|+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  316 (329)
T cd08250         262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDY  316 (329)
T ss_pred             hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHH
Confidence            448898888654322  2356788999999998765     34788888777654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=9.3e-34  Score=270.03  Aligned_cols=299  Identities=17%  Similarity=0.177  Sum_probs=233.9

Q ss_pred             eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++..++.  ++++++.|.|.++++||+||+.++++|++|+..+.|..+... .+|.++|||++|+|+++  +++.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~--~~~~~   77 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR-NYPHTPGIDAAGTVVSS--DDPRF   77 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCC-CCCCccCcccEEEEEEe--CCCCC
Confidence            79999999875  599999999999999999999999999999998888754322 46789999999999999  45679


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+....                        ..|+..+|                   +|++|+.++++.++++|+
T Consensus        78 ~~Gd~V~~~~~------------------------~~g~~~~g-------------------~~~~~~~v~~~~~~~lp~  114 (325)
T cd05280          78 REGDEVLVTGY------------------------DLGMNTDG-------------------GFAEYVRVPADWVVPLPE  114 (325)
T ss_pred             CCCCEEEEccc------------------------ccCCCCCc-------------------eeEEEEEEchhhEEECCC
Confidence            99999986421                        13444445                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHh--CCC-CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVA--GVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~--~~~-~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      ++++++++.+++.+.+||.++....  .+. .+++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++
T Consensus       115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~  193 (325)
T cd05280         115 GLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGAS  193 (325)
T ss_pred             CCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCc
Confidence            9999999999999999999765543  335 3579999998 9999999999999999 799999999999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEE
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCG  328 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g  328 (373)
                      ++++.+.   .. .+..+....+++|++||++++.. +..++++++++ |+++.+|..... ..+++...++ ++.++.+
T Consensus       194 ~~~~~~~---~~-~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~  266 (325)
T cd05280         194 EVLDRED---LL-DESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLG  266 (325)
T ss_pred             EEEcchh---HH-HHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEE
Confidence            9988654   21 12222233338999999999865 99999999997 999999975332 2245555553 4889888


Q ss_pred             eecCCCCc---hhHHHHHHHHHHcCCCC--CCcccccCCCccccc
Q 017335          329 TYFGGLKP---RSDIATLAQKYLDKVHL--RSSFHLCDPNSDSAG  368 (373)
Q Consensus       329 ~~~~~~~~---~~~~~~~~~~~~~g~i~--~~~~~~~~~~~a~~~  368 (373)
                      ........   .+.+..+.+++..+...  .+.|+++++.+++..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  311 (325)
T cd05280         267 IDSVNCPMELRKQVWQKLATEWKPDLLEIVVREISLEELPEAIDR  311 (325)
T ss_pred             EEeecCchhHHHHHHHHHHHHHhcCCccceeeEecHHHHHHHHHH
Confidence            76544321   13344555556666443  277888887777654

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-33  Score=261.00  Aligned_cols=270  Identities=29%  Similarity=0.479  Sum_probs=226.4

Q ss_pred             eEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcC
Q 017335           42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC  121 (373)
Q Consensus        42 evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c  121 (373)
                      ||+|+|.++++|+.|+..+.+..+.. ..+|.++|||++|+|+++|++++.|++||+|+..+...|+.|.+|+.    .|
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~   75 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPP-PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LC   75 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcC-CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hC
Confidence            68999999999999999988876411 15688999999999999999999999999999999999999999997    77


Q ss_pred             ccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCC
Q 017335          122 SKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE  201 (373)
Q Consensus       122 ~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~  201 (373)
                      +....   .+....|                   +|++|+.++.+.++++|+++++++++.++.++.+||.++.....++
T Consensus        76 ~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~  133 (271)
T cd05188          76 PGGGI---LGEGLDG-------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK  133 (271)
T ss_pred             CCCCE---eccccCC-------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC
Confidence            76654   4444455                   8999999999999999999999999999999999999877776679


Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~  280 (373)
                      ++++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++++++...   .++.+.+. ...+ ++|+++|+
T Consensus       134 ~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~  208 (271)
T cd05188         134 PGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDA  208 (271)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEEC
Confidence            99999999996699999999999998 9999999999999999999999988776   66666666 4444 89999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCCchhHHHHHHHHH
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKY  347 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  347 (373)
                      ++.......++++++++ |+++.+|..............+.+++++.++..+.   .++++++++++
T Consensus       209 ~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  271 (271)
T cd05188         209 VGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDLL  271 (271)
T ss_pred             CCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhhC
Confidence            99855589999999997 99999997554333222333333499999987655   45677777653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4.1e-33  Score=265.83  Aligned_cols=297  Identities=16%  Similarity=0.170  Sum_probs=234.3

Q ss_pred             eeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        17 ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||+++...+.+  ++++++|.|.+.+++|+||+.++++|++|+..+.|..+... .+|.++|||++|+|++  .++..|+
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~~   77 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVR-SYPMIPGIDAAGTVVS--SEDPRFR   77 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCC-CCCccceeeeEEEEEe--cCCCCCC
Confidence            68888876663  78999999999999999999999999999998888653321 4688999999999998  5567899


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|++...                        ..|...+|                   +|++|+.+|.+.++++|++
T Consensus        78 ~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~~~~~~~~~iP~~  114 (323)
T TIGR02823        78 EGDEVIVTGY------------------------GLGVSHDG-------------------GYSQYARVPADWLVPLPEG  114 (323)
T ss_pred             CCCEEEEccC------------------------CCCCCCCc-------------------cceEEEEEchhheEECCCC
Confidence            9999986531                        12222344                   8999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHH--hCCCCCC-EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKV--AGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~--~~~~~~~-~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +++++++.+++.+.+|+.++...  ..+.+++ +|+|+|+ |++|++++++|+.+|+ +|+++.+++++.+.++++|+++
T Consensus       115 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~  193 (323)
T TIGR02823       115 LSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASE  193 (323)
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcE
Confidence            99999999999999998865433  3488898 9999998 9999999999999999 8888888888889999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      +++.++   .+.  .+..+.++++|+++||+|+.. +..++++++++ |+++.+|... ....+++...++. ++++.+.
T Consensus       194 ~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~  265 (323)
T TIGR02823       194 VIDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGI  265 (323)
T ss_pred             EEcccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEE
Confidence            988754   332  444555447999999999775 89999999997 9999999753 2334444455534 8999887


Q ss_pred             ecCCCC---chhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          330 YFGGLK---PRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       330 ~~~~~~---~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                      ......   ..+.+..+.+++..+++..  +.|+++++.+++..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~  309 (323)
T TIGR02823       266 DSVYCPMALREAAWQRLATDLKPRNLESITREITLEELPEALEQ  309 (323)
T ss_pred             eccccCchhHHHHHHHHHHHhhcCCCcCceeeecHHHHHHHHHH
Confidence            543221   1233566777787887653  77888888877654

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=3.8e-33  Score=266.22  Aligned_cols=300  Identities=15%  Similarity=0.157  Sum_probs=228.4

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++.+++++  +++++.|.|.|.++||+||+.++++|++|.....+...... .+|.++|||++|+|+++|  ++.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~V~~~~--~~~~   77 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVK-RYPFIPGIDLAGTVVESN--DPRF   77 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccC-CCCcCcccceeEEEEEcC--CCCC
Confidence            799999988764  78899999999999999999999999999876543211111 468899999999999964  4679


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|++...                        ..|...+|                   +|++|+.++++.++++|+
T Consensus        78 ~~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~v~~~~~~~~p~  114 (326)
T cd08289          78 KPGDEVIVTSY------------------------DLGVSHHG-------------------GYSEYARVPAEWVVPLPK  114 (326)
T ss_pred             CCCCEEEEccc------------------------ccCCCCCC-------------------cceeEEEEcHHHeEECCC
Confidence            99999986532                        12333345                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHh--C-CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVA--G-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~--~-~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      ++++++++.+++.+.|||.++....  . ...+++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++
T Consensus       115 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~  193 (326)
T cd08289         115 GLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAK  193 (326)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCC
Confidence            9999999999999999998764432  2 345789999998 9999999999999999 899999999999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  328 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  328 (373)
                      ++++.++   . ..+.+.+++++++|++||++|+.. +..++++++++ |+++.+|.... ...+++...++. ++++.+
T Consensus       194 ~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~  266 (326)
T cd08289         194 EVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLG  266 (326)
T ss_pred             EEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEE
Confidence            9998765   3 344555554448999999999854 89999999997 99999997532 334444555544 899988


Q ss_pred             eecCCC-C--chhHHHHHHHHHHcCC-C--CCCcccccCCCcccccc
Q 017335          329 TYFGGL-K--PRSDIATLAQKYLDKV-H--LRSSFHLCDPNSDSAGL  369 (373)
Q Consensus       329 ~~~~~~-~--~~~~~~~~~~~~~~g~-i--~~~~~~~~~~~~a~~~~  369 (373)
                      ...... .  ..+.+..+.+.+.... +  ..+.|+++++.+++..+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~  313 (326)
T cd08289         267 IDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQI  313 (326)
T ss_pred             EEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHH
Confidence            753221 1  1122333333333121 1  24778888888776553

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=2.9e-33  Score=266.42  Aligned_cols=284  Identities=24%  Similarity=0.290  Sum_probs=241.0

Q ss_pred             eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCC
Q 017335           28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC  107 (373)
Q Consensus        28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c  107 (373)
                      +++++.+.|.+.+++|+||+.++++|+.|...+.+...... .+|.++|||++|+|+++|++++++++||+|+..+.   
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRP-PLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCC-CCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC---
Confidence            66778888899999999999999999999998877653322 56789999999999999999999999999986531   


Q ss_pred             CCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhh
Q 017335          108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  187 (373)
Q Consensus       108 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~  187 (373)
                                                 +                   |+|++|+.++.+.++++|+++++.+++.+++..
T Consensus        90 ---------------------------~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~  123 (323)
T cd05282          90 ---------------------------E-------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINP  123 (323)
T ss_pred             ---------------------------C-------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccH
Confidence                                       1                   389999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHH
Q 017335          188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI  266 (373)
Q Consensus       188 ~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i  266 (373)
                      .+||.++.+...+.++++|||+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|++++++++.   .++...+
T Consensus       124 ~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~  199 (323)
T cd05282         124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRV  199 (323)
T ss_pred             HHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHH
Confidence            999998878778899999999988 8999999999999999 8999999999999999999999999876   6788888


Q ss_pred             HHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEeecCCCCc-------h
Q 017335          267 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP-------R  337 (373)
Q Consensus       267 ~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~  337 (373)
                      .+.+++ ++|++|||+|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.+.....+..       .
T Consensus       200 ~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (323)
T cd05282         200 KEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQ  276 (323)
T ss_pred             HHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHH
Confidence            888877 8999999999877 67889999997 999999875432 3456666666 489998887655321       2


Q ss_pred             hHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          338 SDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       338 ~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      +.+.+++++++++++.+   +.|+++++.+++..
T Consensus       277 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~  310 (323)
T cd05282         277 ETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAA  310 (323)
T ss_pred             HHHHHHHHHHhCCCcccCccceecHHHHHHHHHH
Confidence            45888999999998864   66788877776654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4e-33  Score=264.54  Aligned_cols=297  Identities=21%  Similarity=0.280  Sum_probs=238.3

Q ss_pred             eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      ||++++..++.  .+++.+.+.|.+.++||+||+.++++|+.|+....+..+..  ..|.++|||++|+|+++|.  .++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~vG~--~~~   76 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV--KFPRVLGIEAVGEVEEAPG--GTF   76 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCccccceeEEEEEEecC--CCC
Confidence            68899987654  26777888888999999999999999999999888765443  5678999999999999995  579


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+....                        ..+...+|                   +|++|+.++...++++|+
T Consensus        77 ~~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~~~~~~~~~ip~  113 (320)
T cd08243          77 TPGQRVATAMG------------------------GMGRTFDG-------------------SYAEYTLVPNEQVYAIDS  113 (320)
T ss_pred             CCCCEEEEecC------------------------CCCCCCCc-------------------ccceEEEcCHHHcEeCCC
Confidence            99999987532                        01212233                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++++.+++++.|||.++.+...++++++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|+++++
T Consensus       114 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  192 (320)
T cd08243         114 DLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVV  192 (320)
T ss_pred             CCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence            99999999999999999998877788999999999998 9999999999999999 899999999999999999999888


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc-ccCHHHH---hhCcEEEE
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEI---LKGRSVCG  328 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~---~~~~~i~g  328 (373)
                      +. .   .++.+.+.++ ++++|+++|++|+.. +..++++++++ |+++.+|........ +......   .+++++.+
T Consensus       193 ~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (320)
T cd08243         193 ID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTG  265 (320)
T ss_pred             ec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEe
Confidence            64 3   4677777777 448999999999855 89999999997 999999974322211 1222222   23777777


Q ss_pred             eecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          329 TYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ....... .+.+.+++++++++.+.+   +.|+++++.+++..
T Consensus       266 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~  307 (320)
T cd08243         266 SSSGDVP-QTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAY  307 (320)
T ss_pred             cchhhhh-HHHHHHHHHHHHCCceecccccEEcHHHHHHHHHH
Confidence            6543322 356888999999998764   67788877776544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.6e-33  Score=262.24  Aligned_cols=286  Identities=20%  Similarity=0.274  Sum_probs=231.8

Q ss_pred             cCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcc-cCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEe
Q 017335           23 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP  101 (373)
Q Consensus        23 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  101 (373)
                      +++. +++++++.|++.++||+||+.++++|++|+..+ .+......+.+|.++|||++|+|+++|++++++++||+|+.
T Consensus         3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            4444 899999999999999999999999999999887 66542211135789999999999999999999999999986


Q ss_pred             eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhh
Q 017335          102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  181 (373)
Q Consensus       102 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa  181 (373)
                      ...                                                  |+|++|+.++++.++++|+++  ..++
T Consensus        82 ~~~--------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~~  109 (312)
T cd08269          82 LSG--------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQA  109 (312)
T ss_pred             ecC--------------------------------------------------CcceeeEEEchhheEECCCch--hhhH
Confidence            431                                                  389999999999999999998  2333


Q ss_pred             ccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCcc
Q 017335          182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  261 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~  261 (373)
                      ....++++++.++. ...++++++|+|+|+|++|++++++|+.+|+++|+++.+++++.++++++|++++++.+.   .+
T Consensus       110 ~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~  185 (312)
T cd08269         110 FPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EA  185 (312)
T ss_pred             HhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cC
Confidence            32368889998654 788999999999988999999999999999933999999999999999999999998766   77


Q ss_pred             HHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCC-Cchh
Q 017335          262 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL-KPRS  338 (373)
Q Consensus       262 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~-~~~~  338 (373)
                      +.+.+.+++++ ++|+++||+|.......++++++++ |+++.+|... ....++++..+.. +.++.+...... ...+
T Consensus       186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (312)
T cd08269         186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE  263 (312)
T ss_pred             HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence            88888888876 8999999998877789999999997 9999999743 3344556554444 778777643322 1247


Q ss_pred             HHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335          339 DIATLAQKYLDKVHLR-----SSFHLCDPNSDSA  367 (373)
Q Consensus       339 ~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~  367 (373)
                      .+++++++++++++.+     +.|+++++.+++.
T Consensus       264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~  297 (312)
T cd08269         264 GMREAVKLIADGRLDLGSLLTHEFPLEELGDAFE  297 (312)
T ss_pred             HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence            7999999999998874     4477777776654

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3e-33  Score=269.18  Aligned_cols=296  Identities=25%  Similarity=0.279  Sum_probs=235.3

Q ss_pred             eeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||++++.++ ..+++++++.|.|+++||+||+.++++|++|+....+.. ..  .+|.++|||++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~--~~~~~~g~e~~G~v~~vG~~v~~~~   77 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IP--SYPAILGCDFAGTVVEVGSGVTRFK   77 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-cc--CCCceeeeeeeEEEEEeCCCcCcCC
Confidence            7899999884 238999999999999999999999999999998875554 11  3567899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+......|+                      +...+                   |+|++|+.++.+.++++|++
T Consensus        78 ~Gd~V~~~~~~~~~----------------------~~~~~-------------------g~~~~~~~v~~~~~~~ip~~  116 (339)
T cd08249          78 VGDRVAGFVHGGNP----------------------NDPRN-------------------GAFQEYVVADADLTAKIPDN  116 (339)
T ss_pred             CCCEEEEEeccccC----------------------CCCCC-------------------CcccceEEechhheEECCCC
Confidence            99999876532211                      11123                   38999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCC----------CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGV----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~----------~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      +++++++.+++.+.|||.++.+...+          .++++|||+|+ |++|++++++|+.+|+ +|+++. ++++.+.+
T Consensus       117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~  194 (339)
T cd08249         117 ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLV  194 (339)
T ss_pred             CCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHH
Confidence            99999999999999999987666544          78999999998 8999999999999999 888887 56888999


Q ss_pred             HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhcc--CCceEEEEcccCCCCccccCHHHHh
Q 017335          244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE--GWGKTVILGVEMHGSPISLNSIEIL  321 (373)
Q Consensus       244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~G~~~~~~~~~~~~~~~~  321 (373)
                      +++|++++++.+.   .++.+.+.+.+++++|++||++|.+..+..+++++++  + |+++.+|......       .+.
T Consensus       195 ~~~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~-------~~~  263 (339)
T cd08249         195 KSLGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET-------EPR  263 (339)
T ss_pred             HhcCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc-------cCC
Confidence            9999999999877   7788888877766899999999985559999999999  9 9999998743321       111


Q ss_pred             hCcEEEE---eecC------CCCchhHHHHHHHHHHcCCCCC---Cccc--ccCCCccccc
Q 017335          322 KGRSVCG---TYFG------GLKPRSDIATLAQKYLDKVHLR---SSFH--LCDPNSDSAG  368 (373)
Q Consensus       322 ~~~~i~g---~~~~------~~~~~~~~~~~~~~~~~g~i~~---~~~~--~~~~~~a~~~  368 (373)
                      .+.++..   ..+.      .......+.+++++++++++.+   ..++  ++++.++++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  324 (339)
T cd08249         264 KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDL  324 (339)
T ss_pred             CCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHH
Confidence            1222222   2111      1111355778999999998876   4455  7777776554

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.4e-33  Score=260.94  Aligned_cols=282  Identities=18%  Similarity=0.222  Sum_probs=229.9

Q ss_pred             eeeEEeecCCC-CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGK-PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~-~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||++++.+.+. .+++++.+.|.+.++||+||+.++++|+.|.....+.      ..|.++|||++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~~~~   74 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGSGPA   74 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCCCCC
Confidence            68999987542 2777788999999999999999999999999876521      3456899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+...                              .+                   |+|++|+.++.+.++++|++
T Consensus        75 ~Gd~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~  105 (305)
T cd08270          75 VGARVVGLG------------------------------AM-------------------GAWAELVAVPTGWLAVLPDG  105 (305)
T ss_pred             CCCEEEEec------------------------------CC-------------------cceeeEEEEchHHeEECCCC
Confidence            999997532                              11                   38999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      +++++++++++.+.|||+++.+.... ++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus       106 ~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  183 (305)
T cd08270         106 VSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVV  183 (305)
T ss_pred             CCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            99999999999999999976555444 6999999998 9999999999999999 8999999999999999999877664


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh---CcEEEEee
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK---GRSVCGTY  330 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~---~~~i~g~~  330 (373)
                      ...           ++.++++|+++|++|+.. +..++++++.+ |+++.+|... .....++...+..   +.++.++.
T Consensus       184 ~~~-----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~  249 (305)
T cd08270         184 GGS-----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFF  249 (305)
T ss_pred             ccc-----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEE
Confidence            332           122347999999999875 89999999997 9999999754 3334556555544   78888886


Q ss_pred             cCC-CCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          331 FGG-LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~-~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      +.. ....+.+..++++++++++.+   +.++++++++++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~  291 (305)
T cd08270         250 LYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEA  291 (305)
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHH
Confidence            653 112467889999999999975   56777777776654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=1.8e-32  Score=262.70  Aligned_cols=295  Identities=20%  Similarity=0.186  Sum_probs=239.2

Q ss_pred             eeeEEeecCCCC-----eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           16 CKAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        16 ~ka~~~~~~~~~-----l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      |||++++++++.     +++++++.|.+.+++|+|++.++++|++|+..+.+..+..  .+|.++|||++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~v   78 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVP--GQPKILGWDASGVVEAVGSEV   78 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCC--CCCcccccceEEEEEEcCCCC
Confidence            689999998763     5566778888899999999999999999999887765433  567789999999999999999


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +.|++||+|+....                           +..+|                   +|++|+.++.+.+++
T Consensus        79 ~~~~~Gd~V~~~~~---------------------------~~~~g-------------------~~~~~~~v~~~~~~~  112 (336)
T cd08252          79 TLFKVGDEVYYAGD---------------------------ITRPG-------------------SNAEYQLVDERIVGH  112 (336)
T ss_pred             CCCCCCCEEEEcCC---------------------------CCCCc-------------------cceEEEEEchHHeee
Confidence            99999999985311                           01223                   899999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCC-----CCEEEEECC-ChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHH
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG  243 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~-----~~~VlI~G~-G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~  243 (373)
                      +|+++++++++.+++.+.+||.++.+...+++     +++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.+
T Consensus       113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~  191 (336)
T cd08252         113 KPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWV  191 (336)
T ss_pred             CCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHH
Confidence            99999999999999999999998878888887     999999986 999999999999999 7 999999999999999


Q ss_pred             HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-h
Q 017335          244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-K  322 (373)
Q Consensus       244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~  322 (373)
                      +++|++++++.+.    ++.+.+.....+++|++||++|....+..++++++++ |+++.+|...    ..++...+. +
T Consensus       192 ~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~  262 (336)
T cd08252         192 KELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSK  262 (336)
T ss_pred             HhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcc
Confidence            9999999998763    4555665443348999999999766699999999997 9999998642    234444443 4


Q ss_pred             CcEEEEeecCCC---------CchhHHHHHHHHHHcCCCCC------CcccccCCCccccc
Q 017335          323 GRSVCGTYFGGL---------KPRSDIATLAQKYLDKVHLR------SSFHLCDPNSDSAG  368 (373)
Q Consensus       323 ~~~i~g~~~~~~---------~~~~~~~~~~~~~~~g~i~~------~~~~~~~~~~a~~~  368 (373)
                      +.++.+..+...         ...+.+.++++++.+|.+.+      +.++++++.+++..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~  323 (336)
T cd08252         263 SASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHAL  323 (336)
T ss_pred             cceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHH
Confidence            888887654321         11245788999999998875      23677777776654

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=4.8e-32  Score=256.35  Aligned_cols=296  Identities=23%  Similarity=0.293  Sum_probs=244.6

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++..++.+  +++.+.+.|.+.+++|+||+.++++|++|+..+.+..+... .+|.++|||++|+|+++|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~   79 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPP-GASDILGLEVAGVVVAVGPGVTGW   79 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCC-CCCCcccceeEEEEEeeCCCCCCC
Confidence            799999885543  77888888888999999999999999999988877553322 567899999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+...                              .+|                   +|++|+.++.+.++++|+
T Consensus        80 ~~Gd~V~~~~------------------------------~~g-------------------~~~~~~~~~~~~~~~~p~  110 (323)
T cd05276          80 KVGDRVCALL------------------------------AGG-------------------GYAEYVVVPAGQLLPVPE  110 (323)
T ss_pred             CCCCEEEEec------------------------------CCC-------------------ceeEEEEcCHHHhccCCC
Confidence            9999997532                              112                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++.+++.++.++.++|.++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.++
T Consensus       111 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (323)
T cd05276         111 GLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAI  189 (323)
T ss_pred             CCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence            99999999999999999998877788999999999997 8999999999999999 899999999999999889998888


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~  330 (373)
                      +...   .++.+.+...+.+ ++|+++|+.|+.. +...+++++++ |+++.+|..... ...++...++ +++++.++.
T Consensus       190 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  263 (323)
T cd05276         190 NYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGST  263 (323)
T ss_pred             eCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEee
Confidence            8776   6777778777766 8999999999877 88899999997 999999874332 2355555554 489999886


Q ss_pred             cCCCCc-------hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          331 FGGLKP-------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~-------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ......       .+.+.++++++.++++.+   ..|+++++.+++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  311 (323)
T cd05276         264 LRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRR  311 (323)
T ss_pred             ccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHH
Confidence            554311       133577888898988754   66777777766544

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.2e-31  Score=255.60  Aligned_cols=298  Identities=15%  Similarity=0.162  Sum_probs=234.7

Q ss_pred             eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++.+++.  .+++++.|.|+|+++||+||+.++++|++|...+.+...... .+|.++|||++|+|++  ++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~   77 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVR-TFPLVPGIDLAGTVVE--SSSPRF   77 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccC-CCCCccccceEEEEEe--CCCCCC
Confidence            78999998774  388999999999999999999999999999988877643221 4678899999999999  677789


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+....                        ..+...+|                   +|++|+.++.+.++++|+
T Consensus        78 ~~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~v~~~~~~~lp~  114 (324)
T cd08288          78 KPGDRVVLTGW------------------------GVGERHWG-------------------GYAQRARVKADWLVPLPE  114 (324)
T ss_pred             CCCCEEEECCc------------------------cCCCCCCC-------------------cceeEEEEchHHeeeCCC
Confidence            99999986421                        01111233                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHH--HHhCCC-CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAW--KVAGVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~--~~~~~~-~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      ++++++++.+++.+++++.++.  +..... ++++|||+|+ |++|++++++|+.+|+ +|++++.++++.+.++++|++
T Consensus       115 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~  193 (324)
T cd08288         115 GLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGAS  193 (324)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCC
Confidence            9999999999999999987643  224455 6789999998 9999999999999999 899999999999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hhCcEEEE
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG  328 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g  328 (373)
                      +++++++     ....+..++.+++|.++|+++... +..++..++.+ |+++.+|.... ...+++...+ .++.++.+
T Consensus       194 ~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08288         194 EIIDRAE-----LSEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLG  265 (324)
T ss_pred             EEEEcch-----hhHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEE
Confidence            9998765     222455555557999999999754 77888999997 99999997532 2334455555 34899988


Q ss_pred             eecCCCC---chhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335          329 TYFGGLK---PRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG  368 (373)
Q Consensus       329 ~~~~~~~---~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~  368 (373)
                      .......   ..+.+..+++++.++++.+  +.++++++++++..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~  310 (324)
T cd08288         266 IDSVMAPIERRRAAWARLARDLDPALLEALTREIPLADVPDAAEA  310 (324)
T ss_pred             EEeecccchhhHHHHHHHHHHHhcCCccccceeecHHHHHHHHHH
Confidence            7533322   2345777888888887764  77888888777654

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.3e-32  Score=262.85  Aligned_cols=286  Identities=23%  Similarity=0.326  Sum_probs=217.6

Q ss_pred             eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCC--CCCCccccCcccEE---EEEeC-CCCCccCCCCEEEe
Q 017335           28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAVGV---VESVG-EYVEEVKERDLVLP  101 (373)
Q Consensus        28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V~~  101 (373)
                      ...++.++|.|++++++|++.++++|+.|+.+..|.+....  ..+|.+++.++.|+   +...| ..+..+..||++..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            55677899999999999999999999999999998865441  14664445544444   34444 22334555555532


Q ss_pred             eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhh
Q 017335          102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  181 (373)
Q Consensus       102 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa  181 (373)
                      .                              ..                   .|+|+||+++|+..++++|++++++++|
T Consensus       100 ~------------------------------~~-------------------~g~~aey~v~p~~~~~~~P~~l~~~~aa  130 (347)
T KOG1198|consen  100 F------------------------------LS-------------------SGGLAEYVVVPEKLLVKIPESLSFEEAA  130 (347)
T ss_pred             c------------------------------cC-------------------CCceeeEEEcchhhccCCCCccChhhhh
Confidence            2                              12                   2499999999999999999999999999


Q ss_pred             ccchhhhhHHHHHHHHh------CCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          182 LLSCGVSTGVGAAWKVA------GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~------~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++.+..|||+++....      ++++|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++||++++|+
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy  209 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY  209 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence            99999999999999999      8999999999987 8999999999999996 66666679999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH---hhCcEE-----
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSV-----  326 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~---~~~~~i-----  326 (373)
                      ++   +++.+.+.+.+.++||+||||+|+.. ......++..+ |+...++.. ++...+.+...+   ...+.+     
T Consensus       210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
T KOG1198|consen  210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLV-GDELANYKLDDLWQSANGIKLYSLGL  283 (347)
T ss_pred             CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEec-cccccccccccchhhhhhhhheeeee
Confidence            99   99999999998449999999999975 77777888885 764444432 211111111100   111111     


Q ss_pred             EEe---ecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          327 CGT---YFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~---~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      .+.   ........+.+..+.+++++|+|++   +.||++++.+|+.++
T Consensus       284 ~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~  332 (347)
T KOG1198|consen  284 KGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKL  332 (347)
T ss_pred             eccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHH
Confidence            111   0111223688999999999999997   899999999988764

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=2.3e-32  Score=263.47  Aligned_cols=294  Identities=21%  Similarity=0.202  Sum_probs=228.9

Q ss_pred             eeeEEeecCCCC---eEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCC---------------CCCCCCCcccc
Q 017335           16 CKAAICRIPGKP---LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTD---------------LPKLPLPVIFG   76 (373)
Q Consensus        16 ~ka~~~~~~~~~---l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~~~p~~~G   76 (373)
                      |||+++.+++++   +++++.+.|.|. ++||+|||.++++|++|+..+.|...               ..  .+|.++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~--~~p~~~G   78 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGI--EFPLTLG   78 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCC--CCCeeec
Confidence            789999888774   889999999994 99999999999999999998876421               12  5688999


Q ss_pred             CcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccc
Q 017335           77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS  156 (373)
Q Consensus        77 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~  156 (373)
                      ||++|+|+++|++++++++||+|+....                           ...+|                   +
T Consensus        79 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~g-------------------~  112 (350)
T cd08248          79 RDCSGVVVDIGSGVKSFEIGDEVWGAVP---------------------------PWSQG-------------------T  112 (350)
T ss_pred             ceeEEEEEecCCCcccCCCCCEEEEecC---------------------------CCCCc-------------------c
Confidence            9999999999999999999999986532                           11123                   8


Q ss_pred             eeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCC----CCEEEEECC-ChHHHHHHHHHHHCCCCeEE
Q 017335          157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV----GSTVAIFGL-GAVGLAVAEGARLNRASKII  231 (373)
Q Consensus       157 ~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~----~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi  231 (373)
                      |++|+.++.+.++++|+++++++++.+++.+.|||.++.+...+.+    |++|+|+|+ |++|++++++|+.+|+ +|+
T Consensus       113 ~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~  191 (350)
T cd08248         113 HAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVT  191 (350)
T ss_pred             ceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEE
Confidence            9999999999999999999999999999999999998777766654    999999997 9999999999999999 888


Q ss_pred             EEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCC
Q 017335          232 GVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS  311 (373)
Q Consensus       232 ~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~  311 (373)
                      ++.++ ++.+.++++|++++++...   .++.+.+...  +++|++||++|.. ....++++++++ |+++.+|..+...
T Consensus       192 ~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~  263 (350)
T cd08248         192 TTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKN  263 (350)
T ss_pred             EEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccc
Confidence            88755 6777888999988988776   5565555432  3899999999987 489999999997 9999998543211


Q ss_pred             c--cccC--H----HHHhh-CcE-------EEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          312 P--ISLN--S----IEILK-GRS-------VCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       312 ~--~~~~--~----~~~~~-~~~-------i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      .  ..+.  .    ..+.. ...       +.... . ....+.+.++++++++|.+.+   +.|+++++++++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~  337 (350)
T cd08248         264 TDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF-F-SPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEK  337 (350)
T ss_pred             cccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE-E-CCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHH
Confidence            1  1110  0    01111 111       11110 0 112567999999999998764   67888888777654

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=2.5e-31  Score=251.85  Aligned_cols=300  Identities=23%  Similarity=0.299  Sum_probs=243.2

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      ||++++..++.+  +.+.+++.|.+.+++|+|++.++++|++|+..+.|...... ..|.++|||++|+|+++|+++++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~   79 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLP-PLPYVPGSDGAGVVEAVGEGVDGL   79 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCC-CCCeecccceEEEEEeeCCCCCCC
Confidence            688888876543  78888999999999999999999999999988877653221 578899999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+.....                        .+ ..+|                   ++++|+.++.+.++++|+
T Consensus        80 ~~Gd~v~~~~~~------------------------~~-~~~g-------------------~~~~~~~~~~~~~~~ip~  115 (325)
T cd08253          80 KVGDRVWLTNLG------------------------WG-RRQG-------------------TAAEYVVVPADQLVPLPD  115 (325)
T ss_pred             CCCCEEEEeccc------------------------cC-CCCc-------------------ceeeEEEecHHHcEeCCC
Confidence            999999876420                        00 0123                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++++.+++++.+||.++.+...++++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|+++++
T Consensus       116 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  194 (325)
T cd08253         116 GVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVF  194 (325)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            99999999999999999998877789999999999997 9999999999999999 899999999999999999999998


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      +...   .++.+.+.+.+.+ ++|+++|+.+... ....+++++.+ |+++.+|...  ...+++...++. +.++.+..
T Consensus       195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~  267 (325)
T cd08253         195 NYRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVL  267 (325)
T ss_pred             eCCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeee
Confidence            8776   6788888877766 8999999999876 88889999997 9999998754  223455555334 78887765


Q ss_pred             cCCCCc---hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          331 FGGLKP---RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~---~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ......   .+.+.++.+++.++.+.+   ..|+++++++++..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  311 (325)
T cd08253         268 LYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEA  311 (325)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHH
Confidence            433221   234566677888887653   66777776665543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=6.5e-31  Score=248.25  Aligned_cols=293  Identities=24%  Similarity=0.280  Sum_probs=238.6

Q ss_pred             eeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        17 ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||+.+..++..  +.+.+.+.|.+.+++|+|+|.++++|++|+....+..+.   .+|.++|||++|+|+.+|+++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~~   77 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGFK   77 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCCC
Confidence            46676655542  667777777789999999999999999999988776543   3577899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+...                              ..                   |+|++|+.++.+.++++|++
T Consensus        78 ~G~~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~  108 (320)
T cd05286          78 VGDRVAYAG------------------------------PP-------------------GAYAEYRVVPASRLVKLPDG  108 (320)
T ss_pred             CCCEEEEec------------------------------CC-------------------CceeEEEEecHHHceeCCCC
Confidence            999998542                              01                   38999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      +++.+++.++....++|.++.+...+.++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus       109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  187 (320)
T cd05286         109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVIN  187 (320)
T ss_pred             CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEe
Confidence            9999999999899999998878888999999999996 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hhCcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~~  331 (373)
                      .+.   .++.+.+...+.+ ++|+++||+++.. ...++++++++ |+++.+|..... ...++...+ .+++++.+...
T Consensus       188 ~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  261 (320)
T cd05286         188 YRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSL  261 (320)
T ss_pred             CCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEeh
Confidence            776   6788888888776 8999999999864 88999999997 999999874332 223444444 34888776543


Q ss_pred             CCCC-c----hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          332 GGLK-P----RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       332 ~~~~-~----~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      .... .    .+.+.+++++++++++.+   +.|+++++.+++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~  306 (320)
T cd05286         262 FHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRD  306 (320)
T ss_pred             hhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHH
Confidence            3221 1    234567889999988764   66777777776543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.7e-31  Score=251.56  Aligned_cols=293  Identities=25%  Similarity=0.272  Sum_probs=233.7

Q ss_pred             eeeEEeecCC--CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++.+++  ..+++++.|.|++.+++|+||+.++++|++|+..+.+.....  .+|.++|||++|+|+.+|++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~~~~~   78 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW--SYPHVPGVDGAGVVVAVGAKVTGW   78 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCcccccceEEEEEEeCCCCCcC
Confidence            7999999998  349999999999999999999999999999998877654332  346789999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+....                           +..+|                   +|++|+.++.+.++++|+
T Consensus        79 ~~Gd~V~~~~~---------------------------~~~~~-------------------~~~s~~~~~~~~~~~ip~  112 (325)
T cd08271          79 KVGDRVAYHAS---------------------------LARGG-------------------SFAEYTVVDARAVLPLPD  112 (325)
T ss_pred             CCCCEEEeccC---------------------------CCCCc-------------------cceeEEEeCHHHeEECCC
Confidence            99999986531                           11223                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++.+++.+.+.+.+|+.++.+...+++|++|+|+|+ |++|++++++++..|+ +|+++. ++++.+.++++|++.++
T Consensus       113 ~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~  190 (325)
T cd08271         113 SLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVI  190 (325)
T ss_pred             CCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEe
Confidence            99999999999999999998878888999999999998 8899999999999999 788877 67788888889999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeec
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF  331 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  331 (373)
                      +...   .++...+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|......    ....+..+..+....+
T Consensus       191 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~  261 (325)
T cd08271         191 DYND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDAS----PDPPFTRALSVHEVAL  261 (325)
T ss_pred             cCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCc----chhHHhhcceEEEEEe
Confidence            8776   6677778887766 8999999999876 67789999997 9999997533221    1111112333332221


Q ss_pred             -----CC-----CCchhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335          332 -----GG-----LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA  367 (373)
Q Consensus       332 -----~~-----~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~  367 (373)
                           ..     ....+.+.+++++++++++.+   +.|+++++.+++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~  310 (325)
T cd08271         262 GAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALR  310 (325)
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHH
Confidence                 11     011245677889999988754   6677776666544

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=2.4e-31  Score=240.19  Aligned_cols=282  Identities=20%  Similarity=0.196  Sum_probs=227.7

Q ss_pred             eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC--CCCCccCCCCEEEeeCCC
Q 017335           28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG--EYVEEVKERDLVLPIFHR  105 (373)
Q Consensus        28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~  105 (373)
                      ++++++++|+|+++|||||+.|.|+++- ++-+....+..  -.|+-+|...+|.++...  +....|++||.|+..   
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~---  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV---  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec---
Confidence            9999999999999999999999999983 33343333444  466777777666555543  446679999999743   


Q ss_pred             CCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhh--hcc
Q 017335          106 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLL  183 (373)
Q Consensus       106 ~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~a--a~l  183 (373)
                                                                       .+|++|..++.+.+.++.++.-+..+  ..+
T Consensus       101 -------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL  131 (340)
T COG2130         101 -------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVL  131 (340)
T ss_pred             -------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhc
Confidence                                                             27999999999999999866322222  235


Q ss_pred             chhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCcc
Q 017335          184 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKT  261 (373)
Q Consensus       184 ~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~  261 (373)
                      ..+..|||.++++.++.++|++|+|-++ |++|..+.|+||..|+ +|+++..++||.+++++ +|.|.+||++.   ++
T Consensus       132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d  207 (340)
T COG2130         132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---ED  207 (340)
T ss_pred             CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---cc
Confidence            5689999999999999999999999988 9999999999999999 99999999999999988 99999999999   89


Q ss_pred             HHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC---C-C-ccccCHHHHhh-CcEEEEeec-CCC
Q 017335          262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH---G-S-PISLNSIEILK-GRSVCGTYF-GGL  334 (373)
Q Consensus       262 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~---~-~-~~~~~~~~~~~-~~~i~g~~~-~~~  334 (373)
                      +.+++.+.++.++|+.||++|++. ++..+..|+.. +|+..+|.-..   . . .-+-....++. .++++|+.. ..+
T Consensus       208 ~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~  285 (340)
T COG2130         208 FAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDY  285 (340)
T ss_pred             HHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhh
Confidence            999999999999999999999988 99999999997 99999996322   1 1 11223334444 889999987 333


Q ss_pred             Cc--hhHHHHHHHHHHcCCCCCCccc---ccCCCccccccc
Q 017335          335 KP--RSDIATLAQKYLDKVHLRSSFH---LCDPNSDSAGLL  370 (373)
Q Consensus       335 ~~--~~~~~~~~~~~~~g~i~~~~~~---~~~~~~a~~~~l  370 (373)
                      ..  .+..+++..|+++|||+.+.-.   +|.+++||-.+|
T Consensus       286 ~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl  326 (340)
T COG2130         286 DQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLL  326 (340)
T ss_pred             hhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHh
Confidence            22  2668899999999999985433   777787777665

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.4e-31  Score=249.22  Aligned_cols=294  Identities=22%  Similarity=0.281  Sum_probs=239.0

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++..++.+  +++++.+.|.+.+++|+|++.++++|++|+....+...... ..|.++|||++|+|+++|+++..+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~   79 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP-PLPAILGCDVAGVVEAVGEGVTRF   79 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceeEEEEEeCCCCCCC
Confidence            799999987764  77888888889999999999999999999998877643221 457789999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      ++||+|+....                          |+. ..                   |+|++|+.++.+.++++|
T Consensus        80 ~~Gd~V~~~~~--------------------------~~~~~~-------------------g~~~~~~~v~~~~~~~~p  114 (326)
T cd08272          80 RVGDEVYGCAG--------------------------GLGGLQ-------------------GSLAEYAVVDARLLALKP  114 (326)
T ss_pred             CCCCEEEEccC--------------------------CcCCCC-------------------CceeEEEEecHHHcccCC
Confidence            99999986431                          110 12                   389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++..++.++..+.+||.++.+...++++++++|+|+ |.+|++++++++.+|+ +|++++++ ++.+.++++|++.+
T Consensus       115 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~  192 (326)
T cd08272         115 ANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPI  192 (326)
T ss_pred             CCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEE
Confidence            999999999999999999998888899999999999996 9999999999999999 89999888 88999999999888


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY  330 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  330 (373)
                      ++...   . +.+.+.+.+.+ ++|+++|++++.. ....+++++++ |+++.+|...   ..++... ..+++++.+..
T Consensus       193 ~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~  262 (326)
T cd08272         193 IYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVF  262 (326)
T ss_pred             Eecch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEE
Confidence            88776   5 77788888777 8999999999865 88899999997 9999998643   2222222 13377777765


Q ss_pred             cCC--C---C---chhHHHHHHHHHHcCCCCC----CcccccCCCcccc
Q 017335          331 FGG--L---K---PRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSA  367 (373)
Q Consensus       331 ~~~--~---~---~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~  367 (373)
                      ...  .   .   ..+.+.++++++.++++..    +.|++.++.+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~  311 (326)
T cd08272         263 TLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHA  311 (326)
T ss_pred             cccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHH
Confidence            332  1   1   1356888999999988753    5667776666654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.6e-30  Score=246.91  Aligned_cols=300  Identities=25%  Similarity=0.306  Sum_probs=240.3

Q ss_pred             eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++...+.  .+++.+.+.|.+++++++|+|.++++|+.|+....+...... .+|.++|||++|+|+.+|+.+.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~   79 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPP-PLPARLGYEAAGVVEAVGAGVTGF   79 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCC-CCCCCCCcceEEEEEeeCCCCCcC
Confidence            68888887554  277778888889999999999999999999988877643321 457889999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+..+.                         .+...+|                   ++++|+.++.+.++++|+
T Consensus        80 ~~Gd~V~~~~~-------------------------~~~~~~g-------------------~~~~~~~~~~~~~~~~p~  115 (328)
T cd08268          80 AVGDRVSVIPA-------------------------ADLGQYG-------------------TYAEYALVPAAAVVKLPD  115 (328)
T ss_pred             CCCCEEEeccc-------------------------cccCCCc-------------------cceEEEEechHhcEeCCC
Confidence            99999987542                         1112233                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++++.+++++.++|.++.+...+.++++|+|+|+ |++|++++++++..|+ +|+.+++++++.+.++++|+++++
T Consensus       116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  194 (328)
T cd08268         116 GLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVI  194 (328)
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence            99999999999999999998878888999999999998 9999999999999999 899999999999999889998888


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH-HHhhCcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~~i~g~~  330 (373)
                      +.+.   .++.+.+.+.+.+ ++|+++++.++.. ...++++++++ |+++.+|.... ....++.. .+.++.++.+..
T Consensus       195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  268 (328)
T cd08268         195 VTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYS  268 (328)
T ss_pred             ecCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEe
Confidence            8776   6777778777766 8999999999855 88999999997 99999987443 22334444 234488888876


Q ss_pred             cCCCC-ch----hHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335          331 FGGLK-PR----SDIATLAQKYLDKVHLR---SSFHLCDPNSDSA  367 (373)
Q Consensus       331 ~~~~~-~~----~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~  367 (373)
                      ..... ..    ..+..+.+++.++.+.+   ..|+++++.++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (328)
T cd08268         269 LDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHR  313 (328)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHH
Confidence            44321 11    23455566677777654   6677777666654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=9.7e-31  Score=249.93  Aligned_cols=292  Identities=21%  Similarity=0.211  Sum_probs=229.1

Q ss_pred             eeEEeecCC------CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCC
Q 017335           17 KAAICRIPG------KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        17 ka~~~~~~~------~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      ||+++...+      +.+++++++.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~   82 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP   82 (329)
T ss_pred             cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence            566665432      12889999999999999999999999999876555443211 10023568899999999999964


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-cce
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THV  168 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~  168 (373)
                        ++++||+|+..                                                    ++|++|+.++. +.+
T Consensus        83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~  108 (329)
T cd05288          83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL  108 (329)
T ss_pred             --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence              79999999742                                                    17999999999 999


Q ss_pred             EEcCCCCC--hhhhhc-cchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          169 VKITPHIP--LGIACL-LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       169 ~~lP~~l~--~~~aa~-l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +++|++++  +.+++. +++++.|||.++.+...+.++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++
T Consensus       109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~  187 (329)
T cd05288         109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV  187 (329)
T ss_pred             EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            99999985  555555 88899999998877788999999999996 9999999999999999 8999999999999998


Q ss_pred             H-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc----ccCHHH
Q 017335          245 K-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI----SLNSIE  319 (373)
Q Consensus       245 ~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~----~~~~~~  319 (373)
                      + +|++++++.++   .++.+.+.+.+++++|++|||+|+.. +..++++++++ |+++.+|........    .++...
T Consensus       188 ~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  262 (329)
T cd05288         188 EELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN  262 (329)
T ss_pred             hhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence            8 99999998876   67877887777558999999999755 99999999997 999999864332111    122333


Q ss_pred             Hhh-CcEEEEeecCCCCc--hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          320 ILK-GRSVCGTYFGGLKP--RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       320 ~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ++. +.++.+..+.....  .+.+.++++++.+|.+.+   ..++++++.+++..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~  317 (329)
T cd05288         263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLG  317 (329)
T ss_pred             HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHH
Confidence            334 88888876544321  255788999999998875   55677777666543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=1.6e-30  Score=248.46  Aligned_cols=292  Identities=23%  Similarity=0.274  Sum_probs=230.3

Q ss_pred             eeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        17 ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||+++...+.+  +++.+.+.|.|.+++|+|++.++++|++|+..+.+..+... .+|.++|||++|+|+.+|++++.|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~   80 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQP-PLPFTPGYDLVGRVDALGSGVTGFE   80 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceEEEEEEeCCCCccCC
Confidence            78888876653  88888999999999999999999999999998887654322 5788999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|.....                              +                   |+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~  111 (331)
T cd08273          81 VGDRVAALTR------------------------------V-------------------GGNAEYINLDAKYLVPVPEG  111 (331)
T ss_pred             CCCEEEEeCC------------------------------C-------------------cceeeEEEechHHeEECCCC
Confidence            9999986421                              1                   28999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      +++++++.++.++.+||.++.+...++++++|+|+|+ |++|++++++|+.+|+ +|+++++ +++.+.++++|+.. ++
T Consensus       112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~  188 (331)
T cd08273         112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID  188 (331)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence            9999999999999999998777788999999999998 9999999999999999 8999987 88889999999754 44


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccC--HH----------HHh
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN--SI----------EIL  321 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~--~~----------~~~  321 (373)
                      ...   .++...  ...++++|+++||+++.. ...++++++++ |+++.+|.........++  ..          ...
T Consensus       189 ~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (331)
T cd08273         189 YRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLL  261 (331)
T ss_pred             CCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcce
Confidence            443   444443  344458999999999887 89999999997 999999975432221111  11          011


Q ss_pred             -hCcEEEEeecCCCC------chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          322 -KGRSVCGTYFGGLK------PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       322 -~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                       ....+.+.......      ..+.+.++++++++|.+.+   +.|+++++.+++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~  318 (331)
T cd08273         262 PTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRL  318 (331)
T ss_pred             eccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHH
Confidence             12233332211111      1367888999999998864   67888888777654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.98  E-value=2.6e-30  Score=245.20  Aligned_cols=295  Identities=23%  Similarity=0.255  Sum_probs=240.9

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+.+..++.+  +.+.+.+.|.+++++++|+|.++++|++|+..+.+....+. .+|.++|||++|+|+.+|+.+.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~   79 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPP-GASDILGLEVAGEVVAVGEGVSRW   79 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCCCccceeEEEEEEeCCCCCCC
Confidence            688888876554  66777777778999999999999999999988876543321 467899999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|+...                              .+                   |+|++|+.++.+.++++|+
T Consensus        80 ~~Gd~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~  110 (325)
T TIGR02824        80 KVGDRVCALV------------------------------AG-------------------GGYAEYVAVPAGQVLPVPE  110 (325)
T ss_pred             CCCCEEEEcc------------------------------CC-------------------CcceeEEEecHHHcEeCCC
Confidence            9999997531                              11                   2899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++.+++.++.++.++|.++.+...++++++|+|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.++
T Consensus       111 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (325)
T TIGR02824       111 GLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAI  189 (325)
T ss_pred             CCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999998888889999999999997 9999999999999999 899999999999989889988888


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hhCcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~  330 (373)
                      +...   .++.+.+....++ ++|+++|+.|... +..++++++++ |+++.+|....... .++...+ .+++++.+..
T Consensus       190 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~  263 (325)
T TIGR02824       190 NYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGST  263 (325)
T ss_pred             ecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEe
Confidence            7766   6777888877766 8999999999765 88999999997 99999987432222 5566555 3499999887


Q ss_pred             cCCC-Cc------hhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335          331 FGGL-KP------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA  367 (373)
Q Consensus       331 ~~~~-~~------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~  367 (373)
                      .... ..      ...+.+++++++++++.+   ..|+++++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  310 (325)
T TIGR02824       264 LRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHA  310 (325)
T ss_pred             hhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHH
Confidence            5442 11      123566788998988753   6677776666554

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.98  E-value=5.1e-30  Score=247.77  Aligned_cols=301  Identities=20%  Similarity=0.191  Sum_probs=223.9

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC---CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC-
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP---KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE-   91 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-   91 (373)
                      .|++++.+++.++++++++.|.|   .+++|+||+.++++|++|+..+.+...... ..|.++|||++|+|+++|++++ 
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~V~~vG~~v~~   79 (352)
T cd08247           1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFK-VKEKGLGRDYSGVIVKVGSNVAS   79 (352)
T ss_pred             CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccc-cCCCccCceeEEEEEEeCccccc
Confidence            37899999888788887777766   899999999999999999987754322110 2477899999999999999998 


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc----c
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----H  167 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~  167 (373)
                      +|++||+|+......|                         ..+                   |+|++|+.++..    .
T Consensus        80 ~~~~Gd~V~~~~~~~~-------------------------~~~-------------------g~~~~~~~v~~~~~~~~  115 (352)
T cd08247          80 EWKVGDEVCGIYPHPY-------------------------GGQ-------------------GTLSQYLLVDPKKDKKS  115 (352)
T ss_pred             CCCCCCEEEEeecCCC-------------------------CCC-------------------ceeeEEEEEccccccce
Confidence            8999999986532100                         012                   389999999987    7


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHh-CCCCCCEEEEECC-ChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~-~~~~~~~VlI~G~-G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~  244 (373)
                      ++++|+++++++++.++..+.|||.++.+.. .+++|++|+|+|+ |++|++++++|+.+| .+.|+++.+ +++.+.++
T Consensus       116 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~  194 (352)
T cd08247         116 ITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNK  194 (352)
T ss_pred             eEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHH
Confidence            9999999999999999999999999876666 7999999999998 799999999999875 435777764 55566788


Q ss_pred             HcCCceEEcCCCCCCcc---HHHHHHHh-cCC-CccEEEECCCCHHHHHHHHHHhc---cCCceEEEEcccCCCC--ccc
Q 017335          245 KFGITDFINPATCGDKT---VSQVIKEM-TDG-GADYCFECIGLTSVMNDAFNSSR---EGWGKTVILGVEMHGS--PIS  314 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~---~~~~i~~~-~~~-~~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~G~~~~~~--~~~  314 (373)
                      ++|++++++.++   .+   +...+.+. +++ ++|++|||+|+......++++++   ++ |+++.++......  ..+
T Consensus       195 ~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~  270 (352)
T cd08247         195 KLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDT  270 (352)
T ss_pred             HhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchh
Confidence            899999998766   34   44444444 424 89999999998666889999999   97 9999875322110  000


Q ss_pred             --------cCHHHHhhC-----cEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          315 --------LNSIEILKG-----RSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       315 --------~~~~~~~~~-----~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                              +....+..+     .++....  .....+.+.++++++.++.+.+   +.++++++++++..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~  338 (352)
T cd08247         271 FNSWDNPSANARKLFGSLGLWSYNYQFFL--LDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFER  338 (352)
T ss_pred             hhhccccchhhhhhhhhhcCCCcceEEEE--ecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHH
Confidence                    111111112     2222211  1111356888999999998764   77888888877654

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=4.1e-30  Score=241.61  Aligned_cols=279  Identities=23%  Similarity=0.265  Sum_probs=225.3

Q ss_pred             cCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCcccc
Q 017335           35 VEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK  114 (373)
Q Consensus        35 ~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~  114 (373)
                      +|.+.+++|+|++.++++|+.|+..+.+..+... .+|.++|||++|+|+++|++++++++||+|+....          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMP-PYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCC-CCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC----------
Confidence            5788999999999999999999998887654321 57889999999999999999999999999986531          


Q ss_pred             CCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHH
Q 017335          115 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA  194 (373)
Q Consensus       115 ~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~  194 (373)
                                        ..+|                   +|++|+.++++.++++|+++++++++.++..+.+||.++
T Consensus        71 ------------------~~~g-------------------~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  113 (303)
T cd08251          71 ------------------ESMG-------------------GHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF  113 (303)
T ss_pred             ------------------CCCc-------------------ceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence                              0123                   899999999999999999999999999999999999975


Q ss_pred             HHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-
Q 017335          195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-  272 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-  272 (373)
                       +...++++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++...   .++...+...+++ 
T Consensus       114 -~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~  188 (303)
T cd08251         114 -ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGR  188 (303)
T ss_pred             -HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCC
Confidence             6788999999999976 9999999999999999 8999999999999999999999998876   6788888888877 


Q ss_pred             CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC---C---chhHHHHHHHH
Q 017335          273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL---K---PRSDIATLAQK  346 (373)
Q Consensus       273 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~  346 (373)
                      ++|+++|++++.. ....+++++++ |+++.+|.........++...+..+.++....+...   .   ..+.+.+++++
T Consensus       189 ~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (303)
T cd08251         189 GVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL  266 (303)
T ss_pred             CceEEEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence            8999999998654 88999999997 999999864322222344444444554443322111   1   12457888899


Q ss_pred             HHcCCCCC---CcccccCCCccccc
Q 017335          347 YLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       347 ~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      +.+|.+++   +.|+++++.+++..
T Consensus       267 ~~~g~~~~~~~~~~~~~~~~~~~~~  291 (303)
T cd08251         267 VEEGELRPTVSRIFPFDDIGEAYRY  291 (303)
T ss_pred             HHCCCccCCCceEEcHHHHHHHHHH
Confidence            99998764   66777777666543

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=6.4e-30  Score=240.77  Aligned_cols=289  Identities=21%  Similarity=0.266  Sum_probs=231.1

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      |||+++..++..  +.+++.+.|++++++|+||+.++++|++|+..+.+.... ....+|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            789998877653  566777778899999999999999999999988775421 11145789999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      +++||+|+.....                           ..+                   |+|++|+.++.+.++++|
T Consensus        81 ~~~G~~V~~~~~~---------------------------~~~-------------------g~~~~~~~~~~~~~~~~p  114 (309)
T cd05289          81 FKVGDEVFGMTPF---------------------------TRG-------------------GAYAEYVVVPADELALKP  114 (309)
T ss_pred             CCCCCEEEEccCC---------------------------CCC-------------------CcceeEEEecHHHhccCC
Confidence            9999999865410                           112                   389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++..++.+++.+.+++.++.+...+.++++|+|+|+ |.+|++++++++..|+ +|+++.+++ +.+.++++|++++
T Consensus       115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~  192 (309)
T cd05289         115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV  192 (309)
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence            999999999999999999998777667999999999997 9999999999999999 888888777 8888888998888


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY  330 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  330 (373)
                      ++...   .++.+    .+.+ ++|+++|++++.. ...++++++++ |+++.+|.....  ..   ..+..+.++....
T Consensus       193 ~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~--~~---~~~~~~~~~~~~~  258 (309)
T cd05289         193 IDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPA--EQ---AAKRRGVRAGFVF  258 (309)
T ss_pred             EeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcc--hh---hhhhccceEEEEE
Confidence            87765   44433    3333 7999999999875 89999999997 999999874331  11   2222366666554


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      +...  .+.+.+++++++++.+.+   +.|+++++.++++.
T Consensus       259 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  297 (309)
T cd05289         259 VEPD--GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHER  297 (309)
T ss_pred             eccc--HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHH
Confidence            3222  578999999999998753   67888888777654

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.6e-29  Score=237.85  Aligned_cols=294  Identities=27%  Similarity=0.407  Sum_probs=237.3

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      |||+++..++..  +++.+.+ |.+. +++++|++.++++|++|+..+.+...... ..|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~   78 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKP-PLPFVPGSEVAGVVEAVGEGVTG   78 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCC-CCCCcccceeEEEEEEeCCCCCC
Confidence            689998854432  6777777 6666 59999999999999999988877653221 35678999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      +++||+|+...                              .+                   |++++|+.++.+.++++|
T Consensus        79 ~~~G~~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip  109 (323)
T cd08241          79 FKVGDRVVALT------------------------------GQ-------------------GGFAEEVVVPAAAVFPLP  109 (323)
T ss_pred             CCCCCEEEEec------------------------------CC-------------------ceeEEEEEcCHHHceeCC
Confidence            99999998653                              01                   389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++.+++.+.....+|+.++.+...++++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+
T Consensus       110 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  188 (323)
T cd08241         110 DGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHV  188 (323)
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCcee
Confidence            999999999888899999998777888999999999998 9999999999999999 89999999999999999999888


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEe
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGT  329 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~  329 (373)
                      ++...   .++.+.+...+++ ++|+++|++|+.. ...++++++++ |+++.+|..... ...++....+ ++.++.+.
T Consensus       189 ~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~  262 (323)
T cd08241         189 IDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGE-IPQIPANLLLLKNISVVGV  262 (323)
T ss_pred             eecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCC-cCcCCHHHHhhcCcEEEEE
Confidence            88776   6788888888776 8999999999854 88899999997 999999874322 1113332233 48888887


Q ss_pred             ecCCCCc------hhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335          330 YFGGLKP------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA  367 (373)
Q Consensus       330 ~~~~~~~------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~  367 (373)
                      ....+..      .+.+.+++++++++++.+   ..|++.++.+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (323)
T cd08241         263 YWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALR  309 (323)
T ss_pred             ecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHH
Confidence            6554321      255788999999998754   5566666666554

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.4e-28  Score=235.02  Aligned_cols=295  Identities=21%  Similarity=0.303  Sum_probs=232.3

Q ss_pred             eeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           17 KAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        17 ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||+++...+.  .+.+.+.+.|.|.+++|+||+.++++|++|+..+.+...... ..|.++|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~   79 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAP-KPPFVPGFECAGTVEAVGEGVKDFK   79 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCC-CCCCCCcceeEEEEEEECCCCcCCC
Confidence            4666665443  277778888889999999999999999999998877643221 4577899999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||+|+....                              +|                   +|++|+.++.+.++++|++
T Consensus        80 ~G~~V~~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~ip~~  110 (337)
T cd08275          80 VGDRVMGLTR------------------------------FG-------------------GYAEVVNVPADQVFPLPDG  110 (337)
T ss_pred             CCCEEEEecC------------------------------CC-------------------eeeeEEEecHHHeEECCCC
Confidence            9999986421                              12                   8999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++.+++.+.++|.++.+...++++++|+|+|+ |++|++++++|+.+ +. .++... .+++.+.++++|+++++
T Consensus       111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~~-~~~~~~~~~~~g~~~~~  188 (337)
T cd08275         111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGTA-SASKHEALKENGVTHVI  188 (337)
T ss_pred             CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEeC-CHHHHHHHHHcCCcEEe
Confidence            9999999999999999998888888999999999998 99999999999999 43 333332 45678888889998899


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc---------------cccCH
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP---------------ISLNS  317 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~---------------~~~~~  317 (373)
                      +.+.   .++...+...+++++|+++|++|+.. ...++++++++ |+++.+|.......               +.+..
T Consensus       189 ~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (337)
T cd08275         189 DYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDP  263 (337)
T ss_pred             eCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCH
Confidence            8876   67878888777558999999999865 88999999997 99999987532211               12222


Q ss_pred             HHHhh-CcEEEEeecCCCCc-----hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          318 IEILK-GRSVCGTYFGGLKP-----RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       318 ~~~~~-~~~i~g~~~~~~~~-----~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ...+. +.++.+..+.....     ...+.++++++.++++.+   ..|+++++++++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (337)
T cd08275         264 MKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRR  323 (337)
T ss_pred             HHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHH
Confidence            33344 88888876542211     134678889999998764   66777777776553

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=6.7e-29  Score=235.43  Aligned_cols=283  Identities=22%  Similarity=0.225  Sum_probs=217.8

Q ss_pred             EEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC-CCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCC
Q 017335           29 VIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC  107 (373)
Q Consensus        29 ~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c  107 (373)
                      ++++.+.|++.++||+|++.++++|++|...+.|..+.. ...+|..+|||++|+|+++|++++++++||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            778889999999999999999999999999887754210 01356789999999999999999999999999865420  


Q ss_pred             CCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhh
Q 017335          108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  187 (373)
Q Consensus       108 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~  187 (373)
                                               ...                   |+|++|+.++.+.++++|+++++++++.+++++
T Consensus        93 -------------------------~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  128 (319)
T cd08267          93 -------------------------KGG-------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG  128 (319)
T ss_pred             -------------------------CCC-------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence                                     111                   389999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHH
Q 017335          188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI  266 (373)
Q Consensus       188 ~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i  266 (373)
                      .+||.++.+...++++++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|++++++.+.   .++.   
T Consensus       129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---  200 (319)
T cd08267         129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---  200 (319)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence            999998777777999999999998 9999999999999999 89998865 8888889999988888765   3443   


Q ss_pred             HHhcCC-CccEEEECCCCH-HHHHHHHHHhccCCceEEEEcccCCCCcccc---CHHHHhhCcEEEEeecCCCCchhHHH
Q 017335          267 KEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISL---NSIEILKGRSVCGTYFGGLKPRSDIA  341 (373)
Q Consensus       267 ~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~  341 (373)
                      ...+.+ ++|+++||+++. ......+..++++ |+++.+|..........   .........++.......  ..+.+.
T Consensus       201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  277 (319)
T cd08267         201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLE  277 (319)
T ss_pred             hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHH
Confidence            334444 899999999953 2234444459997 99999997543322221   111222233333322221  267899


Q ss_pred             HHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          342 TLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       342 ~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      +++++++++++.+   +.|+++++.+++..
T Consensus       278 ~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~  307 (319)
T cd08267         278 QLAELVEEGKLKPVIDSVYPLEDAPEAYRR  307 (319)
T ss_pred             HHHHHHHCCCeeeeeeeEEcHHHHHHHHHH
Confidence            9999999998764   66788877777654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=8.8e-29  Score=230.30  Aligned_cols=267  Identities=21%  Similarity=0.193  Sum_probs=218.0

Q ss_pred             CeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCc
Q 017335           41 WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT  120 (373)
Q Consensus        41 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~  120 (373)
                      +||+||+.++++|++|+....+..  .  .+|.++|||++|+|+++|++++++++||+|+....                
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~----------------   60 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--P--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP----------------   60 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--C--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec----------------
Confidence            589999999999999999887754  2  46789999999999999999999999999986421                


Q ss_pred             CccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCC
Q 017335          121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV  200 (373)
Q Consensus       121 c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~  200 (373)
                                                        |+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+
T Consensus        61 ----------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~  106 (293)
T cd05195          61 ----------------------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL  106 (293)
T ss_pred             ----------------------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc
Confidence                                              3899999999999999999999999999999999999988788899


Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--CceEEcCCCCCCccHHHHHHHhcCC-CccE
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIKEMTDG-GADY  276 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg--a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~  276 (373)
                      ++|++|+|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|  ++++++...   .++.+.+.+.+.+ ++|+
T Consensus       107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~  182 (293)
T cd05195         107 QKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDV  182 (293)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceE
Confidence            99999999986 9999999999999999 8999999999999999888  788888766   6788888888776 8999


Q ss_pred             EEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCC------chhHHHHHHHHHHcC
Q 017335          277 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK------PRSDIATLAQKYLDK  350 (373)
Q Consensus       277 vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g  350 (373)
                      ++|++|+. .++.++++++++ |+++.+|.........++...+..+.++.+..+....      ..+.+.+++++++++
T Consensus       183 vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (293)
T cd05195         183 VLNSLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAG  260 (293)
T ss_pred             EEeCCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCC
Confidence            99999988 499999999997 9999998744322122333333336666655432211      124578889999999


Q ss_pred             CCCC---CcccccCCCcccc
Q 017335          351 VHLR---SSFHLCDPNSDSA  367 (373)
Q Consensus       351 ~i~~---~~~~~~~~~~a~~  367 (373)
                      ++.+   ..+.++++.+++.
T Consensus       261 ~~~~~~~~~~~~~~~~~a~~  280 (293)
T cd05195         261 VLKPLPPTVVPSASEIDAFR  280 (293)
T ss_pred             CcccCCCeeechhhHHHHHH
Confidence            8764   4566666655544

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=3.2e-28  Score=226.46  Aligned_cols=263  Identities=21%  Similarity=0.241  Sum_probs=214.3

Q ss_pred             EEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccC
Q 017335           45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF  124 (373)
Q Consensus        45 Vkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~  124 (373)
                      ||+.++++|++|+..+.+..+     .|.++|||++|+|+++|++++++++||+|+....                    
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--------------------   56 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP--------------------   56 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--------------------
Confidence            899999999999998877532     3568999999999999999999999999986421                    


Q ss_pred             CCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCC
Q 017335          125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS  204 (373)
Q Consensus       125 ~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~  204 (373)
                                                    |+|++|+.++.+.++++|+++++++++.+++.+.++|.++.+...+++++
T Consensus        57 ------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~  106 (288)
T smart00829       57 ------------------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGE  106 (288)
T ss_pred             ------------------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCC
Confidence                                          38999999999999999999999999999999999999877888999999


Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceEEcCCCCCCccHHHHHHHhcCC-CccEEEEC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTDG-GADYCFEC  280 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~  280 (373)
                      +|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|+  +++++...   .++.+.+.+.+++ ++|+++|+
T Consensus       107 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~  182 (288)
T smart00829      107 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNS  182 (288)
T ss_pred             EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeC
Confidence            9999986 9999999999999999 89999999999999999998  78888776   6787888887776 89999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC--C---chhHHHHHHHHHHcCCCCC-
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL--K---PRSDIATLAQKYLDKVHLR-  354 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--~---~~~~~~~~~~~~~~g~i~~-  354 (373)
                      +++. .+..++++++++ |+++.+|.........++...+.++.++.+..+...  .   ..+.+.+++++++++++.+ 
T Consensus       183 ~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (288)
T smart00829      183 LAGE-FLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL  260 (288)
T ss_pred             CCHH-HHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence            9964 488999999997 999999864322222344444334677666543211  1   1245777889999998764 


Q ss_pred             --CcccccCCCccccc
Q 017335          355 --SSFHLCDPNSDSAG  368 (373)
Q Consensus       355 --~~~~~~~~~~a~~~  368 (373)
                        +.|+++++.+++..
T Consensus       261 ~~~~~~~~~~~~~~~~  276 (288)
T smart00829      261 PVTVFPISDVEDAFRY  276 (288)
T ss_pred             CceEEcHHHHHHHHHH
Confidence              66777776665543

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.94  E-value=2e-25  Score=208.26  Aligned_cols=232  Identities=25%  Similarity=0.293  Sum_probs=186.5

Q ss_pred             CCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceec
Q 017335           70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH  149 (373)
Q Consensus        70 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~  149 (373)
                      .+|.++|||++|+|+++|++++++++||+|+...                                              
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------------------------   52 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG----------------------------------------------   52 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----------------------------------------------
Confidence            4889999999999999999999999999998531                                              


Q ss_pred             ccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCe
Q 017335          150 HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK  229 (373)
Q Consensus       150 ~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~  229 (373)
                            .|++|+.++.+.++++|+++++++++.+ ..+.+||.++ ....++++++|||+|+|++|++++++|+.+|+++
T Consensus        53 ------~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~  124 (277)
T cd08255          53 ------PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE  124 (277)
T ss_pred             ------CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence                  5899999999999999999999999988 7899999975 5788999999999988999999999999999933


Q ss_pred             EEEEcCChhHHHHHHHcC-CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          230 IIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       230 Vi~~~~~~~~~~~~~~lg-a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      |+++++++++.+.++++| ++++++...           ..+.+ ++|++||+++....+...+++++++ |+++.+|..
T Consensus       125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~  192 (277)
T cd08255         125 VVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY  192 (277)
T ss_pred             EEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence            999999999999999999 565554332           11234 8999999999777789999999997 999999975


Q ss_pred             CCCCccccCHHHHhh-CcEEEEeecCCCC---------chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          308 MHGSPISLNSIEILK-GRSVCGTYFGGLK---------PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       308 ~~~~~~~~~~~~~~~-~~~i~g~~~~~~~---------~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ... . ......+.. ..++.+.......         ..+.+.+++++++++++..   +.|+++++.++++.+
T Consensus       193 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~  265 (277)
T cd08255         193 GLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLL  265 (277)
T ss_pred             CCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHH
Confidence            432 1 112223333 5577776543211         1256899999999998754   678888888776543

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.92  E-value=1.1e-22  Score=183.59  Aligned_cols=274  Identities=23%  Similarity=0.214  Sum_probs=203.1

Q ss_pred             CCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccC----cccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCc
Q 017335           36 EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH----EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECR  111 (373)
Q Consensus        36 p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~----e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~  111 (373)
                      .++++++||||..|-+..+--...+....+..- -.|+.+|-    .++|+|++.+  .++|++||.|....        
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y-~~~~~~G~pi~g~GV~kVi~S~--~~~~~~GD~v~g~~--------  101 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDY-APPYEPGKPIDGFGVAKVIDSG--HPNYKKGDLVWGIV--------  101 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcccc-cCcccCCcEecCCceEEEEecC--CCCCCcCceEEEec--------
Confidence            347889999999999998764433332222210 12333332    7899999964  46799999996432        


Q ss_pred             cccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcCC--CCChhhhh-ccchh
Q 017335          112 DCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP--HIPLGIAC-LLSCG  186 (373)
Q Consensus       112 ~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP~--~l~~~~aa-~l~~~  186 (373)
                                                                  +|.||.+++..  ...++|.  +.++.... ++..+
T Consensus       102 --------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~  137 (343)
T KOG1196|consen  102 --------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMP  137 (343)
T ss_pred             --------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhhccCCc
Confidence                                                        69999999764  3344443  34433333 35568


Q ss_pred             hhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHH
Q 017335          187 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQ  264 (373)
Q Consensus       187 ~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~  264 (373)
                      .+|||....+....+.|++|+|-|+ |++|+++.|+||.+|+ +|++...++||-.++++ +|.+..+|+++  +.+..+
T Consensus       138 glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e~~~~~  214 (343)
T KOG1196|consen  138 GLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSA  214 (343)
T ss_pred             hhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--ccCHHH
Confidence            8999999999999999999999998 9999999999999999 99999999999999875 79999999998  248888


Q ss_pred             HHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc----cC-HHHHh-hCcEEEEeecCCCCc--
Q 017335          265 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS----LN-SIEIL-KGRSVCGTYFGGLKP--  336 (373)
Q Consensus       265 ~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~----~~-~~~~~-~~~~i~g~~~~~~~~--  336 (373)
                      ++.+..+.++|+.||.+|+.. ++..+..|+.. ||++.+|.-+ ....+    +. ....+ ++++++|....++.+  
T Consensus       215 aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~IS-qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~  291 (343)
T KOG1196|consen  215 ALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMIS-QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY  291 (343)
T ss_pred             HHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeeh-hccccCCccccchhhheeeeEEeeeEEeechhhhh
Confidence            898888889999999999988 99999999996 9999999743 11111    11 12223 378888876555432  


Q ss_pred             hhHHHHHHHHHHcCCCCCCccc---ccCCCccccccc
Q 017335          337 RSDIATLAQKYLDKVHLRSSFH---LCDPNSDSAGLL  370 (373)
Q Consensus       337 ~~~~~~~~~~~~~g~i~~~~~~---~~~~~~a~~~~l  370 (373)
                      .+-++.+..++++|||...+-.   ++..++|+-.++
T Consensus       292 ~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf  328 (343)
T KOG1196|consen  292 PKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLF  328 (343)
T ss_pred             HHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHh
Confidence            2456888999999999973322   566666665443

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.89  E-value=5.2e-23  Score=210.10  Aligned_cols=274  Identities=16%  Similarity=0.110  Sum_probs=225.6

Q ss_pred             eEEEEEecC---CCCCCeEEEEEeeeeccccchhcccCCCCCCC-----CCCCccccCcccEEEEEeCCCCCccCCCCEE
Q 017335           28 LVIEEIEVE---PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-----LPLPVIFGHEAVGVVESVGEYVEEVKERDLV   99 (373)
Q Consensus        28 l~~~~~~~p---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V   99 (373)
                      +++.+-|..   +..++.=+..|-|+.||..|+++..|+.+.+.     ......+|-|++|+          .+-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence            566666644   34678889999999999999999999876552     02225888899885          5779999


Q ss_pred             EeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhh
Q 017335          100 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  179 (373)
Q Consensus       100 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~  179 (373)
                      +...                              +.-                   +.++-+.++.+.+|.+|++...++
T Consensus      1499 M~mv------------------------------pAk-------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMV------------------------------PAK-------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred             EEee------------------------------ehh-------------------hhhhhhhcchhhhhhCCcccchhh
Confidence            6432                              222                   788999999999999999999999


Q ss_pred             hhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcC
Q 017335          180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINP  254 (373)
Q Consensus       180 aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~  254 (373)
                      |+..|+.+.|+|+++..++..++|+++||+++ |++|++|+.+|.+.|+ +|+.+..++||++++.+    +-.+++-|+
T Consensus      1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred             cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence            99999999999999999999999999999955 9999999999999999 99999999999999875    346778888


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (373)
                      ++   .+|.+-+...|.| |+|+|++....+. ++.+++||..+ |||..+|...-++..++.+.-|++|.+++|..+-+
T Consensus      1609 Rd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDs 1683 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDS 1683 (2376)
T ss_pred             cc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhh
Confidence            88   8999999999999 9999999999887 99999999997 99999998777777889998888999999986544


Q ss_pred             CC--chhHHHHHHHHHHcCCCC----C---CcccccCCCccc
Q 017335          334 LK--PRSDIATLAQKYLDKVHL----R---SSFHLCDPNSDS  366 (373)
Q Consensus       334 ~~--~~~~~~~~~~~~~~g~i~----~---~~~~~~~~~~a~  366 (373)
                      ..  ..+.+.++.+++++|.-.    |   +.|+-.++.+||
T Consensus      1684 vmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AF 1725 (2376)
T KOG1202|consen 1684 VMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAF 1725 (2376)
T ss_pred             hhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHH
Confidence            32  246677777777775432    2   445544544444

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=1.9e-23  Score=167.94  Aligned_cols=108  Identities=34%  Similarity=0.596  Sum_probs=96.1

Q ss_pred             CCeEEEEEeeeeccccchhcccCC-CCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCC
Q 017335           40 AWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS  118 (373)
Q Consensus        40 ~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~  118 (373)
                      |+||||||.++|||++|++.+++. ....  .+|.++|||++|+|+++|+++++|++||||++.+...|+.|++|+.+.+
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPP--KFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTS--SSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCC--CCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            689999999999999999999984 3333  8999999999999999999999999999999999989999999999999


Q ss_pred             CcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335          119 NTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus       119 ~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      ++|.+...   .|+..+|                   +|+||+.+|+++++++
T Consensus        79 ~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence            99988775   7777888                   9999999999999975

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.77  E-value=8.3e-18  Score=139.10  Aligned_cols=128  Identities=30%  Similarity=0.517  Sum_probs=117.4

Q ss_pred             hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHH
Q 017335          213 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAF  291 (373)
Q Consensus       213 ~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~  291 (373)
                      ++|++++|+||.+|+ +|++++++++|++.++++|+++++++++   .++.+.+++.+++ ++|+||||+|....++.++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~   76 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI   76 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence            589999999999996 9999999999999999999999999998   7899999999998 9999999999888899999


Q ss_pred             HHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHc
Q 017335          292 NSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLD  349 (373)
Q Consensus       292 ~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~  349 (373)
                      ++++++ |+++.+|... ....+++...++. ++++.|+..+.   .++++++++++.+
T Consensus        77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~  130 (130)
T PF00107_consen   77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ  130 (130)
T ss_dssp             HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred             HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence            999997 9999999965 4677889999888 99999997666   7899999998864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.33  E-value=3.1e-11  Score=120.63  Aligned_cols=155  Identities=17%  Similarity=0.157  Sum_probs=114.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCC----------CccHHHHHHH
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCG----------DKTVSQVIKE  268 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~----------~~~~~~~i~~  268 (373)
                      ..++++|+|+|+|.+|+++++.|+.+|+ +|+++|.++++++.++++|++.+ +|..+..          ..++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4689999999999999999999999999 89999999999999999999854 6654310          1133333333


Q ss_pred             h-cC--CCccEEEECCCC-----HHH-HHHHHHHhccCCceEEEEcccCCCC-ccccCHHHHh--hCcEEEEeecCCCCc
Q 017335          269 M-TD--GGADYCFECIGL-----TSV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL--KGRSVCGTYFGGLKP  336 (373)
Q Consensus       269 ~-~~--~~~d~vid~~g~-----~~~-~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~--~~~~i~g~~~~~~~~  336 (373)
                      . .+  +++|+||+|++.     +.+ .+.+++.++++ |+++++|...++. ..+.+...++  ++++++|...  ++ 
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P-  316 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP-  316 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence            3 33  279999999996     335 49999999997 9999999854443 3444444444  3899999852  22 


Q ss_pred             hhHHHHHHHHHHcCCCCCCcccc
Q 017335          337 RSDIATLAQKYLDKVHLRSSFHL  359 (373)
Q Consensus       337 ~~~~~~~~~~~~~g~i~~~~~~~  359 (373)
                      .+...++.+++.++.++......
T Consensus       317 ~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        317 SRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             hhHHHHHHHHHHhCCccHHHHhc
Confidence            23344689999998887644443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.19  E-value=6e-10  Score=108.77  Aligned_cols=143  Identities=13%  Similarity=0.161  Sum_probs=112.5

Q ss_pred             HHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHh
Q 017335          191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       191 ~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      |.++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+++.++.+|++.+ +        ..+.+   
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v---  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV---  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence            344555544 4689999999999999999999999999 89999999999999999998533 1        11122   


Q ss_pred             cCCCccEEEECCCCHHHHHHH-HHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHH--HHHH
Q 017335          270 TDGGADYCFECIGLTSVMNDA-FNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA--TLAQ  345 (373)
Q Consensus       270 ~~~~~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~--~~~~  345 (373)
                        .++|+||+|+|....+... ++.++++ |+++.+|..    ..+++...+.. ++++.++.....  ..+++  +.+.
T Consensus       256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~  326 (413)
T cd00401         256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII  326 (413)
T ss_pred             --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence              2689999999998878875 9999997 999999963    34678877777 899998854321  12455  7999


Q ss_pred             HHHcCCC-CCC
Q 017335          346 KYLDKVH-LRS  355 (373)
Q Consensus       346 ~~~~g~i-~~~  355 (373)
                      ++.+|++ +..
T Consensus       327 LLa~Grlvnl~  337 (413)
T cd00401         327 LLAEGRLVNLG  337 (413)
T ss_pred             hhhCcCCCCCc
Confidence            9999999 653

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=98.63  E-value=2.9e-09  Score=87.36  Aligned_cols=106  Identities=22%  Similarity=0.315  Sum_probs=69.2

Q ss_pred             cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC--CHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hh
Q 017335          246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG--LTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK  322 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~  322 (373)
                      |||++|+|++.   .++      ...+++|+|||++|  .+..+..++++| ++ |+++.++.       ....... ..
T Consensus         1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~   62 (127)
T PF13602_consen    1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK   62 (127)
T ss_dssp             CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred             CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence            69999999987   666      22349999999999  666447777888 97 99999973       1122222 12


Q ss_pred             CcEEEEeecCCC-C---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          323 GRSVCGTYFGGL-K---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 ~~~i~g~~~~~~-~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ...+....+... .   ..+.++++++++.+|+|++   +.|+++++.+|+..+
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l  116 (127)
T PF13602_consen   63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERL  116 (127)
T ss_dssp             CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHH
T ss_pred             ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHH
Confidence            334444433321 1   2456999999999999998   789999999988654

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.57  E-value=4.9e-07  Score=90.44  Aligned_cols=127  Identities=19%  Similarity=0.175  Sum_probs=91.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCC----------CCccHHHHHHHh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATC----------GDKTVSQVIKEM  269 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~----------~~~~~~~~i~~~  269 (373)
                      .++++|+|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+ ++..+.          ..+++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999 79999999999999999998763 332110          012344444443


Q ss_pred             cC---CCccEEEECC---CCHH---HHHHHHHHhccCCceEEEEcccCCCCccccC--HHHHh-h-CcEEEEee
Q 017335          270 TD---GGADYCFECI---GLTS---VMNDAFNSSREGWGKTVILGVEMHGSPISLN--SIEIL-K-GRSVCGTY  330 (373)
Q Consensus       270 ~~---~~~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~--~~~~~-~-~~~i~g~~  330 (373)
                      ..   .++|+||+|+   |.+.   ..+..++.+++| +.+++++..++++ ++..  ...+. . ++.+.|..
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GGn-~E~t~p~~~~~~~~GV~~~gv~  312 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGGN-CEYTKPGEVYTTENQVKVIGYT  312 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCCC-EEEecCceEEEecCCEEEEeeC
Confidence            33   2799999999   5422   567889999997 9999999876663 3322  11112 2 47777764

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.39  E-value=2.3e-08  Score=98.92  Aligned_cols=159  Identities=18%  Similarity=0.209  Sum_probs=107.5

Q ss_pred             cccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccc
Q 017335           74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN  153 (373)
Q Consensus        74 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~  153 (373)
                      .-|.|+++.+.+|++++++     +|++.+.+ ||+|.+|    ++.|...+.   .|...++                 
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~-----------------  138 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER-----------------  138 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence            4688999999999998876     66666666 8999998    556655554   3433444                 


Q ss_pred             ccceeeeEEeeccceEE---c-CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCe
Q 017335          154 ISSFTEYSVVDITHVVK---I-TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK  229 (373)
Q Consensus       154 ~g~~a~~~~v~~~~~~~---l-P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~  229 (373)
                        .|++++.++. .+..   + +..++...+|         ...+.+..+..++++|+|+|+|.+|..+++.++..|+.+
T Consensus       139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence              7898888765 3332   3 2223322221         111233444567899999999999999999999999669


Q ss_pred             EEEEcCChhHHH-HHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335          230 IIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS  285 (373)
Q Consensus       230 Vi~~~~~~~~~~-~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  285 (373)
                      |++++++.++.. +++++|.. .+..     .+..+.+     .++|+||+|++.+.
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l-----~~aDvVi~aT~s~~  252 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYL-----AEADIVISSTGAPH  252 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHH-----hhCCEEEECCCCCC
Confidence            999999988755 56667753 2221     1222222     26999999998655

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.29  E-value=1.3e-05  Score=78.92  Aligned_cols=103  Identities=18%  Similarity=0.229  Sum_probs=80.0

Q ss_pred             HHHHHHHHhCCC-CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHH
Q 017335          190 GVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       190 a~~~~~~~~~~~-~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~  268 (373)
                      .|.++.+...+. +|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|++ +.        ++.+.+  
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal--  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA--  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH--
Confidence            344444443544 89999999999999999999999999 999999999887777666764 32        121111  


Q ss_pred             hcCCCccEEEECCCCHHHHH-HHHHHhccCCceEEEEcccC
Q 017335          269 MTDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       269 ~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~  308 (373)
                         .++|+||+++|....+. ..+..++++ +.++..|...
T Consensus       266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence               27999999999887676 688999997 9999999754

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.28  E-value=1.6e-06  Score=80.95  Aligned_cols=101  Identities=28%  Similarity=0.394  Sum_probs=72.8

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHc----CCceEEcCCCCCCccHHHHHHHhc-
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT-  270 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~l----ga~~vi~~~~~~~~~~~~~i~~~~-  270 (373)
                      ...++++++||.+|+|. |..+.++++..|.. +|++++.+++..+.+++.    |...+-. ..   .+    +.++. 
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~-~~---~d----~~~l~~  142 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEF-RL---GE----IEALPV  142 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEE-EE---cc----hhhCCC
Confidence            35788999999999988 88888888887753 799999999998888763    3322210 00   12    22222 


Q ss_pred             -CCCccEEEECC------CCHHHHHHHHHHhccCCceEEEEccc
Q 017335          271 -DGGADYCFECI------GLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       271 -~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                       ++.||+|+...      .....+..+++.|++| |++++.+..
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~  185 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVV  185 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEee
Confidence             34799999543      3345689999999997 999988764

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.23  E-value=3.3e-05  Score=72.97  Aligned_cols=111  Identities=17%  Similarity=0.239  Sum_probs=83.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+++|+|+|.|.+|+.++..++.+|+ +|+++++++++.+.++++|++.+ ..     .+    +.+.. .++|+||+|+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~----l~~~l-~~aDiVI~t~  218 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SE----LAEEV-GKIDIIFNTI  218 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HH----HHHHh-CCCCEEEECC
Confidence            68999999999999999999999999 99999999998888888887532 11     11    22222 2699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      +........++.++++ +.+++++..+.+.  .+.  .... +++..+.
T Consensus       219 p~~~i~~~~l~~~~~g-~vIIDla~~pggt--d~~--~a~~~Gv~~~~~  262 (296)
T PRK08306        219 PALVLTKEVLSKMPPE-ALIIDLASKPGGT--DFE--YAEKRGIKALLA  262 (296)
T ss_pred             ChhhhhHHHHHcCCCC-cEEEEEccCCCCc--Cee--ehhhCCeEEEEE
Confidence            8765556778889997 9999998865542  332  2223 6777653

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.19  E-value=1.6e-05  Score=73.24  Aligned_cols=133  Identities=20%  Similarity=0.252  Sum_probs=86.8

Q ss_pred             ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      +|.+|.. +...++.+++++++..+..-. +..+ ...+.  ..+.++++||.+|+|. |.+++.+++ .|..+|+++|.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~~-l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRLC-LEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHHH-HHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4666644 777889999999888776333 2221 11121  1257899999999988 887776554 67757999999


Q ss_pred             ChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC--CccEEEECCCCHH---HHHHHHHHhccCCceEEEEccc
Q 017335          236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTS---VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       236 ~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~--~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      ++...+.+++.....-+. ..   .       ....+  .||+|+.......   .+..+.+.|+++ |++++.|..
T Consensus       151 s~~~l~~A~~n~~~~~~~-~~---~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~  215 (250)
T PRK00517        151 DPQAVEAARENAELNGVE-LN---V-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL  215 (250)
T ss_pred             CHHHHHHHHHHHHHcCCC-ce---E-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence            999888776521100000 00   0       01112  5999997665432   466788899997 999998764

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.18  E-value=3.5e-05  Score=75.41  Aligned_cols=100  Identities=19%  Similarity=0.280  Sum_probs=78.7

Q ss_pred             HHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335          192 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       192 ~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+        ..+.+    
T Consensus       183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal----  248 (406)
T TIGR00936       183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA----  248 (406)
T ss_pred             HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH----
Confidence            33444434 4689999999999999999999999999 899999998887777777763 321        11122    


Q ss_pred             CCCccEEEECCCCHHHHHH-HHHHhccCCceEEEEccc
Q 017335          271 DGGADYCFECIGLTSVMND-AFNSSREGWGKTVILGVE  307 (373)
Q Consensus       271 ~~~~d~vid~~g~~~~~~~-~~~~l~~~~G~~v~~G~~  307 (373)
                       .+.|+||+++|....++. .+..++++ +.++.+|..
T Consensus       249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~  284 (406)
T TIGR00936       249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF  284 (406)
T ss_pred             -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence             268999999999887764 88999997 999999875

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.08  E-value=1.5e-07  Score=93.36  Aligned_cols=160  Identities=18%  Similarity=0.155  Sum_probs=97.2

Q ss_pred             cccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccc
Q 017335           74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN  153 (373)
Q Consensus        74 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~  153 (373)
                      .-|||+++.+.+|++++++.-+|.     +.+ ||+|.    +.+..|...+.   .|...++                 
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk----~a~~~a~~~g~---~g~~l~~-----------------  140 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVK----DAYALAQEAGT---VGTILNR-----------------  140 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHH----HHHHHHHHcCC---chHHHHH-----------------
Confidence            459999999999999987744444     333 44443    22233333222   1111122                 


Q ss_pred             ccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhC---CCCCCEEEEECCChHHHHHHHHHHHCCCCeE
Q 017335          154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKI  230 (373)
Q Consensus       154 ~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~---~~~~~~VlI~G~G~vG~~a~~la~~~G~~~V  230 (373)
                        .|++.+.+        |..+..+.+. ...+.++++.++.....   -.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus       141 --lf~~a~~~--------~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V  209 (423)
T PRK00045        141 --LFQKAFSV--------AKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI  209 (423)
T ss_pred             --HHHHHHHH--------HhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence              45544333        3333322222 22255555655433222   3578999999999999999999999998789


Q ss_pred             EEEcCChhHHH-HHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335          231 IGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS  285 (373)
Q Consensus       231 i~~~~~~~~~~-~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  285 (373)
                      ++++++.++.. +++++|++ +++.     .++.+.+     .++|+||+|++.+.
T Consensus       210 ~v~~r~~~ra~~la~~~g~~-~~~~-----~~~~~~l-----~~aDvVI~aT~s~~  254 (423)
T PRK00045        210 TVANRTLERAEELAEEFGGE-AIPL-----DELPEAL-----AEADIVISSTGAPH  254 (423)
T ss_pred             EEEeCCHHHHHHHHHHcCCc-EeeH-----HHHHHHh-----ccCCEEEECCCCCC
Confidence            99999988865 56677753 3321     1121111     26899999999754

>PLN02494 adenosylhomocysteinase

Probab=98.01  E-value=7.4e-05  Score=73.93  Aligned_cols=101  Identities=21%  Similarity=0.274  Sum_probs=79.8

Q ss_pred             HHHHHHHhCC-CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHh
Q 017335          191 VGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       191 ~~~~~~~~~~-~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. ++        +..+.+   
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~-vv--------~leEal---  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQ-VL--------TLEDVV---  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCe-ec--------cHHHHH---
Confidence            4445555554 679999999999999999999999999 899999998887777777764 22        122222   


Q ss_pred             cCCCccEEEECCCCHHH-HHHHHHHhccCCceEEEEccc
Q 017335          270 TDGGADYCFECIGLTSV-MNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       270 ~~~~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~G~~  307 (373)
                        ..+|+++++.|.... ....+..++++ +.++.+|..
T Consensus       308 --~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~  343 (477)
T PLN02494        308 --SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF  343 (477)
T ss_pred             --hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence              158999999998764 47899999997 999999974

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.01  E-value=2.1e-05  Score=74.88  Aligned_cols=109  Identities=17%  Similarity=0.200  Sum_probs=79.8

Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCC---CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHH-H
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV---EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-E  241 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~---~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~-~  241 (373)
                      +.++++|+.+..+.++... ++++++.++......   .++.+|+|+|+|.+|..+++.++..|..+|+++++++++. +
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            4667888988888887766 677777754333222   4789999999999999999999988877899999998875 5


Q ss_pred             HHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHH
Q 017335          242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV  286 (373)
Q Consensus       242 ~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~  286 (373)
                      +++++|+. +++.     .++.+.+     ..+|+||.|++.+..
T Consensus       218 la~~~g~~-~~~~-----~~~~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL-----DELLELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH-----HHHHHHH-----hcCCEEEECCCCCch
Confidence            66778873 3321     1222222     258999999998764

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.94  E-value=3.5e-05  Score=68.01  Aligned_cols=121  Identities=18%  Similarity=0.199  Sum_probs=87.0

Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcC
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFG  247 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~----~~~lg  247 (373)
                      +..++....-.+..+...|.  +.....++++++||-+|+|+ |..++-+++..|  +|+.+++.++-.+.    ++.+|
T Consensus        44 d~~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg  118 (209)
T COG2518          44 DRALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLG  118 (209)
T ss_pred             CCcccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcC
Confidence            34444555555555656554  56888999999999999988 999999999999  89999998874444    45678


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...|.....    |   ....+.+. .||.|+-+.+.+..-..+++.|++| |+++.--
T Consensus       119 ~~nV~v~~g----D---G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~Pv  169 (209)
T COG2518         119 YENVTVRHG----D---GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPV  169 (209)
T ss_pred             CCceEEEEC----C---cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEE
Confidence            644322221    1   11223333 8999998888777568899999997 9987653

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.79  E-value=0.00028  Score=66.35  Aligned_cols=95  Identities=16%  Similarity=0.221  Sum_probs=72.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|++|+|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ ..     .+    +.+.. .++|+|++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~----l~~~l-~~aDiVint~  217 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NK----LEEKV-AEIDIVINTI  217 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HH----HHHHh-ccCCEEEECC
Confidence            57899999999999999999999999 99999999888777777765322 11     11    22222 2799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      +....-...++.++++ ..+++++..+.
T Consensus       218 P~~ii~~~~l~~~k~~-aliIDlas~Pg  244 (287)
T TIGR02853       218 PALVLTADVLSKLPKH-AVIIDLASKPG  244 (287)
T ss_pred             ChHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence            8654335677888997 99999987554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.78  E-value=0.00024  Score=69.23  Aligned_cols=101  Identities=21%  Similarity=0.210  Sum_probs=71.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.+ ++.........  ..++    .+.. ..+|+||+|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l----~~~l-~~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEI----EDAV-KRADLLIGA  237 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHH----HHHH-ccCCEEEEc
Confidence            34569999999999999999999999 89999999888877654 45432222221  0222    2222 268999999


Q ss_pred             CC---C--HH-HHHHHHHHhccCCceEEEEcccCCCC
Q 017335          281 IG---L--TS-VMNDAFNSSREGWGKTVILGVEMHGS  311 (373)
Q Consensus       281 ~g---~--~~-~~~~~~~~l~~~~G~~v~~G~~~~~~  311 (373)
                      ++   .  +. .....++.++++ +.+++++..+++.
T Consensus       238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG~  273 (370)
T TIGR00518       238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGGC  273 (370)
T ss_pred             cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCCC
Confidence            73   2  21 236777889997 9999999866654

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.78  E-value=1.3e-05  Score=82.67  Aligned_cols=81  Identities=21%  Similarity=0.265  Sum_probs=59.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC---------------------hhHHHHHHHcCCceEEcCCCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---------------------PEKFEIGKKFGITDFINPATC  257 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~---------------------~~~~~~~~~lga~~vi~~~~~  257 (373)
                      ..++|++|+|+|+|+.|+.+++.++..|+ +|++++..                     +.+.+.++++|++..++....
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            36789999999999999999999999999 79989853                     345677888998877764320


Q ss_pred             CCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335          258 GDKTVSQVIKEMTDGGADYCFECIGLTS  285 (373)
Q Consensus       258 ~~~~~~~~i~~~~~~~~d~vid~~g~~~  285 (373)
                      .+... +.+    ..++|+||+++|...
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence            00111 111    226999999999754

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.77  E-value=0.00039  Score=69.00  Aligned_cols=100  Identities=19%  Similarity=0.267  Sum_probs=76.9

Q ss_pred             HHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335          192 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       192 ~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+         ++.+.+    
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell----  307 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVV----  307 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHH----
Confidence            33444433 4579999999999999999999999999 89999988877655555665321         222222    


Q ss_pred             CCCccEEEECCCCHHHHH-HHHHHhccCCceEEEEccc
Q 017335          271 DGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       271 ~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~  307 (373)
                       ..+|+|+.++|....+. ..+..++++ +.++.+|..
T Consensus       308 -~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~  343 (476)
T PTZ00075        308 -ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF  343 (476)
T ss_pred             -hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence             26899999999877665 899999997 999999875

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.75  E-value=0.00021  Score=67.30  Aligned_cols=127  Identities=17%  Similarity=0.234  Sum_probs=77.1

Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      ...+.+..++.+..+.--...++  ...+ .. ...++++||-+|+|. |.+++.+++ .|..+|++++.++...+.+++
T Consensus       127 ~~~i~ldpg~aFgtG~h~tt~l~--l~~l-~~-~~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~  200 (288)
T TIGR00406       127 ALIIMLDPGLAFGTGTHPTTSLC--LEWL-ED-LDLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARK  200 (288)
T ss_pred             cEEEEECCCCcccCCCCHHHHHH--HHHH-Hh-hcCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHH
Confidence            45566666665554432221111  1111 11 246789999999988 877777665 566699999999988777764


Q ss_pred             c----CCc-eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH---HHHHHHHHHhccCCceEEEEccc
Q 017335          246 F----GIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       246 l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .    +.. .+....    .+    .....+++||+|+......   ..+..+.+.|+++ |.++..|..
T Consensus       201 n~~~n~~~~~~~~~~----~~----~~~~~~~~fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       201 NAELNQVSDRLQVKL----IY----LEQPIEGKADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             HHHHcCCCcceEEEe----cc----cccccCCCceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            2    211 111100    11    1112234899999655433   3466788999997 999988763

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.60  E-value=0.00041  Score=73.19  Aligned_cols=137  Identities=20%  Similarity=0.233  Sum_probs=87.7

Q ss_pred             ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc
Q 017335          156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD  234 (373)
Q Consensus       156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~  234 (373)
                      ++.+|..+|+..++.+ +..+.+++..-..+          .....+|++|||+|+ |++|+.+++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            5677888887777766 55666666421100          122346899999997 9999999999999999 999999


Q ss_pred             CChhHHHHHHH-cCC---ceE--EcCCCCCCccHHHHHHHhc--CCCccEEEECCCC-----------------------
Q 017335          235 INPEKFEIGKK-FGI---TDF--INPATCGDKTVSQVIKEMT--DGGADYCFECIGL-----------------------  283 (373)
Q Consensus       235 ~~~~~~~~~~~-lga---~~v--i~~~~~~~~~~~~~i~~~~--~~~~d~vid~~g~-----------------------  283 (373)
                      ++.++.+.+.+ ++.   ..+  .|-.+  ..++.+.+.+..  .+++|++|++.|.                       
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99887666543 432   112  23222  122333333322  2379999999982                       


Q ss_pred             --HHHHHHHHHHhcc---CCceEEEEccc
Q 017335          284 --TSVMNDAFNSSRE---GWGKTVILGVE  307 (373)
Q Consensus       284 --~~~~~~~~~~l~~---~~G~~v~~G~~  307 (373)
                        ...++.+++.++.   + |+++.++..
T Consensus       532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~  559 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLG-GSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence              1234455666655   5 889988864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.49  E-value=0.00052  Score=57.01  Aligned_cols=96  Identities=21%  Similarity=0.210  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc--eEEcCCCCCCccHHHHHHHhcCCCccEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      -.+.+++|+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++..  .++..++     +.+.+     ..+|+|
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~-----~~~Div   79 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEAL-----QEADIV   79 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHH-----HTESEE
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHH-----hhCCeE
Confidence            46899999999999999999999999988999999999877764 45322  2333322     21111     279999


Q ss_pred             EECCCCHHH--HHHHHHHhcc-CCceEEEEccc
Q 017335          278 FECIGLTSV--MNDAFNSSRE-GWGKTVILGVE  307 (373)
Q Consensus       278 id~~g~~~~--~~~~~~~l~~-~~G~~v~~G~~  307 (373)
                      |+|++....  ....+....+ - +.+++++.+
T Consensus        80 I~aT~~~~~~i~~~~~~~~~~~~-~~v~Dla~P  111 (135)
T PF01488_consen   80 INATPSGMPIITEEMLKKASKKL-RLVIDLAVP  111 (135)
T ss_dssp             EE-SSTTSTSSTHHHHTTTCHHC-SEEEES-SS
T ss_pred             EEecCCCCcccCHHHHHHHHhhh-hceeccccC
Confidence            999987641  1222222222 1 477888753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.42  E-value=0.0015  Score=63.97  Aligned_cols=112  Identities=13%  Similarity=0.147  Sum_probs=77.0

Q ss_pred             cchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccH
Q 017335          183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  262 (373)
Q Consensus       183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~  262 (373)
                      +..+-...+..+.+...++++++||.+|+|. |..+..+++..|+ +|++++.+++..+.+++.....-+....   .++
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~  222 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY  222 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch
Confidence            3334444555566778899999999999965 7788888988898 9999999999999987643211111111   122


Q ss_pred             HHHHHHhcCCCccEEEEC-----CCC---HHHHHHHHHHhccCCceEEEEc
Q 017335          263 SQVIKEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       263 ~~~i~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                          +++ ++.+|.|+..     +|.   ...+..+.+.|+++ |++++..
T Consensus       223 ----~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~  267 (383)
T PRK11705        223 ----RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT  267 (383)
T ss_pred             ----hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence                122 3479998743     343   34578889999997 9988753

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.38  E-value=0.001  Score=62.52  Aligned_cols=136  Identities=21%  Similarity=0.333  Sum_probs=81.3

Q ss_pred             ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      .|.+|-.-+...++.|.+++.+....--.+.++.-+  +.+.  .++|++||=+|+|+ |.+++..++ +|+++|+++|.
T Consensus       119 ~w~~~~~~~~~~~I~idPg~AFGTG~H~TT~lcl~~--l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~Di  192 (295)
T PF06325_consen  119 SWEEYPEPPDEIVIEIDPGMAFGTGHHPTTRLCLEL--LEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDI  192 (295)
T ss_dssp             TT----SSTTSEEEEESTTSSS-SSHCHHHHHHHHH--HHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEES
T ss_pred             CCcccCCCCCcEEEEECCCCcccCCCCHHHHHHHHH--HHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecC
Confidence            455552224567788888887777755443333211  2222  67889999999876 666666665 58889999999


Q ss_pred             ChhHHHHHHH----cCC-ceE-EcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH---HHHHHHHHhccCCceEEEEcc
Q 017335          236 NPEKFEIGKK----FGI-TDF-INPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       236 ~~~~~~~~~~----lga-~~v-i~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++...+.+++    -|. +.+ +....    +       ...+.||+|+-.+-...   ....+.+.++++ |.+++.|.
T Consensus       193 Dp~Av~~a~~N~~~N~~~~~~~v~~~~----~-------~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGI  260 (295)
T PF06325_consen  193 DPLAVEAARENAELNGVEDRIEVSLSE----D-------LVEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGI  260 (295)
T ss_dssp             SCHHHHHHHHHHHHTT-TTCEEESCTS----C-------TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCeeEEEEEec----c-------cccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccc
Confidence            9876666543    222 122 21111    1       11248999997666544   244566778997 99999998


Q ss_pred             cCC
Q 017335          307 EMH  309 (373)
Q Consensus       307 ~~~  309 (373)
                      ...
T Consensus       261 l~~  263 (295)
T PF06325_consen  261 LEE  263 (295)
T ss_dssp             EGG
T ss_pred             cHH
Confidence            654

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.38  E-value=0.0023  Score=55.55  Aligned_cols=102  Identities=18%  Similarity=0.329  Sum_probs=72.4

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE  268 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~  268 (373)
                      +.+.++++|+.++-+|+|. |..++++++..-..+|++++++++..+..+    ++|.+.  ++..+.   +   +.+.+
T Consensus        27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p---~~L~~   99 (187)
T COG2242          27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---P---EALPD   99 (187)
T ss_pred             HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---h---HhhcC
Confidence            3556889999999999876 777888885444449999999999887764    588763  443332   2   22222


Q ss_pred             hcCCCccEEEECCCC--HHHHHHHHHHhccCCceEEEEcc
Q 017335          269 MTDGGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       269 ~~~~~~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.  .+|.+|---|.  +..++.++..|+++ |++|.-..
T Consensus       100 ~~--~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         100 LP--SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             CC--CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence            21  69999955443  44688999999997 99886654

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.38  E-value=0.003  Score=55.93  Aligned_cols=103  Identities=18%  Similarity=0.336  Sum_probs=70.9

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcC-CceEEcCCCCCCccHHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFG-ITDFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lg-a~~vi~~~~~~~~~~~~~i~~  268 (373)
                      .....+.++++||.+|+|. |..++.+++..+. .+|++++.+++..+.++    ++| .+.+....    .+..+.+..
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFT  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhh
Confidence            3456889999999999988 8899999987652 38999999998877664    355 33222111    122222222


Q ss_pred             hcCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEE
Q 017335          269 MTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       269 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      . .+.+|.||...+.   ...+..+.+.|+++ |+++..
T Consensus       108 ~-~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        108 I-NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             c-CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            2 2379999985553   34577888899997 998853

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.36  E-value=0.0031  Score=56.98  Aligned_cols=104  Identities=22%  Similarity=0.258  Sum_probs=68.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF---GITDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~l---ga~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .+++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++   +..+.+..+-.....+.+.+.+...  +++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999998 8999999999999999 999999998877665 222   2223332222111223222222211  368


Q ss_pred             cEEEECCCCH-----------------------HHHHHHHHHhccCCceEEEEccc
Q 017335          275 DYCFECIGLT-----------------------SVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       275 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      |.++.+.+..                       ..++...+.++++ |+++.++..
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  137 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM  137 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence            9999888742                       1244556667786 999988764

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.28  E-value=0.0038  Score=59.57  Aligned_cols=103  Identities=23%  Similarity=0.326  Sum_probs=72.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~  268 (373)
                      +.+...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++    +.|.+.+....    .+..+.+..
T Consensus        72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~  146 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPE  146 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcccc
Confidence            34566788999999999985 9999999998763 36999999998766654    35654332211    122211111


Q ss_pred             hcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          269 MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       269 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                        .+.+|+|+.+.+........++.|+++ |+++..
T Consensus       147 --~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        147 --FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             --cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence              137999999888777667889999997 997763

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.21  E-value=0.016  Score=54.60  Aligned_cols=137  Identities=10%  Similarity=0.079  Sum_probs=90.4

Q ss_pred             ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhC---CCCCCEEEEECC-ChHHHHHHHHHH-HCCCCeE
Q 017335          156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGL-GAVGLAVAEGAR-LNRASKI  230 (373)
Q Consensus       156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~---~~~~~~VlI~G~-G~vG~~a~~la~-~~G~~~V  230 (373)
                      .|-+|.++..+....  +.....++..-+ -+.|.|. +.+-..   .-..+.|+|.++ +-+++.++.+++ ..+.-++
T Consensus        90 ~YN~Y~r~~~d~~y~--~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYD--PEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccC--cchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            477777766554331  122223333333 5667775 433322   334567888887 788988888888 4554499


Q ss_pred             EEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          231 IGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       231 i~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |++. ++.+..+.+++|. ++|+.+++         |..+....--+++|..|+..+...+-+.+...--..+.+|.
T Consensus       166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~  232 (314)
T PF11017_consen  166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGA  232 (314)
T ss_pred             EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEc
Confidence            9999 4555668899995 88888875         44443446678889999999888888888775234677776

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.17  E-value=0.015  Score=49.50  Aligned_cols=109  Identities=18%  Similarity=0.272  Sum_probs=71.5

Q ss_pred             HHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          194 AWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       194 ~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +.+..+ .-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++.+.-.+..-|.+ +.        .+.+    .. .
T Consensus        13 i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~----a~-~   77 (162)
T PF00670_consen   13 IMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEE----AL-R   77 (162)
T ss_dssp             HHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHH----HT-T
T ss_pred             HHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHH----HH-h
Confidence            334444 5689999999999999999999999999 999999999888777766753 22        1222    21 2


Q ss_pred             CccEEEECCCCHHH-HHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh
Q 017335          273 GADYCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK  322 (373)
Q Consensus       273 ~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  322 (373)
                      ..|+++.++|.... -..-++.|+++ ..+..+|..    ..+++...+..
T Consensus        78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~----d~Eid~~~L~~  123 (162)
T PF00670_consen   78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGHF----DVEIDVDALEA  123 (162)
T ss_dssp             T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSSS----TTSBTHHHHHT
T ss_pred             hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCcC----ceeEeeccccc
Confidence            68999999997663 35778889996 777777753    33666666554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.16  E-value=0.0015  Score=51.70  Aligned_cols=92  Identities=26%  Similarity=0.346  Sum_probs=62.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHH-c---CC-ceE-EcCCCCCCccHHHHHHHhcCCCc
Q 017335          202 VGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GI-TDF-INPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~~-l---ga-~~v-i~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      |+.+||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++ .   +. +.+ +...     ++ . ......++|
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~-~~~~~~~~~   71 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E-FDPDFLEPF   71 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H-GGTTTSSCE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c-cCcccCCCC
Confidence            688999999987 888888888 4677 99999999998888764 2   21 222 1111     22 1 111112379


Q ss_pred             cEEEECC-CC---H------HHHHHHHHHhccCCceEEE
Q 017335          275 DYCFECI-GL---T------SVMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       275 d~vid~~-g~---~------~~~~~~~~~l~~~~G~~v~  303 (373)
                      |+|+... ..   .      ..++.+.+.|+++ |+++.
T Consensus        72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi  109 (112)
T PF12847_consen   72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI  109 (112)
T ss_dssp             EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence            9999766 21   1      2478899999997 99875

...

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.15  E-value=0.0059  Score=54.77  Aligned_cols=106  Identities=19%  Similarity=0.231  Sum_probs=73.2

Q ss_pred             hhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCC
Q 017335          186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCG  258 (373)
Q Consensus       186 ~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~  258 (373)
                      +...++  +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++    .|..  .++..+.  
T Consensus        62 p~~~~~--~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~--  136 (212)
T PRK13942         62 IHMVAI--MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG--  136 (212)
T ss_pred             HHHHHH--HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc--
Confidence            444443  45667889999999999987 7788888887763 399999999987776653    4432  2333222  


Q ss_pred             CccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          259 DKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       259 ~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       ..      ...+ +.||+|+-..........+++.|++| |+++..
T Consensus       137 -~~------~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        137 -TL------GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             -cc------CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence             00      1112 37999986555555577899999997 998764

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.04  E-value=0.0054  Score=54.68  Aligned_cols=101  Identities=16%  Similarity=0.178  Sum_probs=69.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCc---eEEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGIT---DFINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~---~vi~~~~~~~~~~~~~  265 (373)
                      +.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.++    +.|..   .++..+.      .+.
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~  136 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG  136 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence            45666788999999999977 778888888764 238999999988766654    34432   2333222      111


Q ss_pred             HHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          266 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       266 i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.  ..+.||+|+-+.......+.+++.|++| |+++..
T Consensus       137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            10  1237999997766556567888999997 998764

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.03  E-value=0.0013  Score=58.89  Aligned_cols=109  Identities=17%  Similarity=0.260  Sum_probs=71.9

Q ss_pred             cchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHH----HcCCce--EEcCC
Q 017335          183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGK----KFGITD--FINPA  255 (373)
Q Consensus       183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~----~lga~~--vi~~~  255 (373)
                      ++.+...|.  +.+...+++|++||-+|+|. |..++.+++..|.. +|+.+++.++-.+.++    ++|.+.  ++..+
T Consensus        55 is~P~~~a~--~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd  131 (209)
T PF01135_consen   55 ISAPSMVAR--MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD  131 (209)
T ss_dssp             E--HHHHHH--HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-
T ss_pred             chHHHHHHH--HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc
Confidence            333444443  56778899999999999987 88888899888743 6999999887655553    456543  33222


Q ss_pred             CCCCccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          256 TCGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .         ...+.. +.||.|+-+.+.+..-...++.|++| |+++..
T Consensus       132 g---------~~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  132 G---------SEGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             G---------GGTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             h---------hhccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence            1         111222 38999998888777567899999997 998874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.01  E-value=0.011  Score=54.49  Aligned_cols=81  Identities=20%  Similarity=0.263  Sum_probs=57.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCc-eEEcCCCCCCccHHHHHHH-hcCC
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT-DFINPATCGDKTVSQVIKE-MTDG  272 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~-~vi~~~~~~~~~~~~~i~~-~~~~  272 (373)
                      ..+.++||+|+ +++|...+..+...|+ +++.+.|+++|++.+.+     .|.. +++..+- .+.+-...+.+ +...
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHhc
Confidence            46789999999 8999999999999999 99999999999888743     2221 2333222 22333333333 3222


Q ss_pred             --CccEEEECCCC
Q 017335          273 --GADYCFECIGL  283 (373)
Q Consensus       273 --~~d~vid~~g~  283 (373)
                        .+|+.+++.|.
T Consensus        82 ~~~IdvLVNNAG~   94 (265)
T COG0300          82 GGPIDVLVNNAGF   94 (265)
T ss_pred             CCcccEEEECCCc
Confidence              79999999885

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=96.99  E-value=0.0049  Score=55.66  Aligned_cols=79  Identities=20%  Similarity=0.250  Sum_probs=59.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC--c--eEEcCCCCCCccHHHHHHHhcCC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI--T--DFINPATCGDKTVSQVIKEMTDG--G  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga--~--~vi~~~~~~~~~~~~~i~~~~~~--~  273 (373)
                      .++.++|+|+ +++|.+.++.+...|+ +|+.+.|..++++.++ +++.  -  ..+|-.+  ..++...+..+...  .
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence            4578999999 8999999999999999 9999999999988875 4762  1  2333333  23455555555544  6


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+.++..|.
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999999885

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.96  E-value=0.012  Score=51.67  Aligned_cols=103  Identities=20%  Similarity=0.256  Sum_probs=63.8

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-Ccc
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GAD  275 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d  275 (373)
                      ...++++++||.+|+|+-++......+..+..+|++++.++..    +..+.. ++..+. .+.+..+.+.+..++ ++|
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~-~~~~~~~~l~~~~~~~~~D  100 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDF-TDEEVLNKIRERVGDDKVD  100 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeC-CChhHHHHHHHHhCCCCcc
Confidence            3457899999999998744433333333344489999998754    112333 332221 113334455555545 899


Q ss_pred             EEEE-CC----CC------------HHHHHHHHHHhccCCceEEEEcc
Q 017335          276 YCFE-CI----GL------------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|+. ..    |.            ...+..+.+.|+++ |+++....
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~  147 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVF  147 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence            9994 32    21            34578889999997 99988643

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.95  E-value=0.0083  Score=56.20  Aligned_cols=140  Identities=21%  Similarity=0.304  Sum_probs=83.6

Q ss_pred             ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHH-HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc
Q 017335          156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD  234 (373)
Q Consensus       156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~  234 (373)
                      +|.+|..-....+++|.+++.+...---    .|.++ +.- -...+++.+||=+|+|+ |.+++..+ .+|+.+|+++|
T Consensus       120 sw~~~~~~~~~~~i~lDPGlAFGTG~Hp----TT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~D  192 (300)
T COG2264         120 SWREYPEPSDELNIELDPGLAFGTGTHP----TTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVD  192 (300)
T ss_pred             CCccCCCCCCceEEEEccccccCCCCCh----hHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEec
Confidence            4555433224667888888866544332    33332 211 12356999999999977 77666554 46666999999


Q ss_pred             CChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH---HHHHHHHHHhccCCceEEEEccc
Q 017335          235 INPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       235 ~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .++...+.+++    -+........     .+ .......++.+|+|+-.+=..   ...+.+.+.++++ |++++.|..
T Consensus       193 iDp~AV~aa~eNa~~N~v~~~~~~~-----~~-~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl  265 (300)
T COG2264         193 IDPQAVEAARENARLNGVELLVQAK-----GF-LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL  265 (300)
T ss_pred             CCHHHHHHHHHHHHHcCCchhhhcc-----cc-cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence            99876665543    2332100000     00 011112224899999655322   2466788899997 999999985


Q ss_pred             CC
Q 017335          308 MH  309 (373)
Q Consensus       308 ~~  309 (373)
                      ..
T Consensus       266 ~~  267 (300)
T COG2264         266 ED  267 (300)
T ss_pred             Hh
Confidence            43

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.84  E-value=0.022  Score=45.62  Aligned_cols=102  Identities=19%  Similarity=0.318  Sum_probs=69.4

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~  268 (373)
                      .....+.++++|+-+|+|. |..+..+++..+..+|++++.++...+.+++    .+..  .++..+.   ...   .. 
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~-   83 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LE-   83 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Ch-
Confidence            4455677889999999987 8888899988754599999999988777643    4432  2222221   110   11 


Q ss_pred             hcCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEc
Q 017335          269 MTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       269 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...+.+|+|+...+.   ...+..+.+.|+++ |+++...
T Consensus        84 ~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        84 DSLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             hhcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence            112379999975533   23688899999997 9988653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.78  E-value=0.02  Score=51.59  Aligned_cols=81  Identities=17%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---CceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      ++.+++|+|+ |.+|...++.+...|+ +|+++++++++...+. .+.   .-+.+..+-....++.+.+.+...  +++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999988888899 8999999887765543 332   112222222112333333443322  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (237)
T PRK07326         84 DVLIANAGV   92 (237)
T ss_pred             CEEEECCCC
Confidence            999988763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.74  E-value=0.011  Score=51.46  Aligned_cols=90  Identities=26%  Similarity=0.392  Sum_probs=62.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.+++..........+.. .        .++.+.+.     ..|+|+.+
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~--------~~l~ell~-----~aDiv~~~   98 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y--------VSLDELLA-----QADIVSLH   98 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E--------SSHHHHHH-----H-SEEEE-
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e--------eehhhhcc-----hhhhhhhh
Confidence            358999999999999999999999999 999999988876645555531 1        12332222     47899987


Q ss_pred             CCCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .....     .=...+..++++ ..+|.++.
T Consensus        99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen   99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             hccccccceeeeeeeeeccccc-eEEEeccc
Confidence            76322     123567788886 88887764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.73  E-value=0.0045  Score=55.58  Aligned_cols=101  Identities=19%  Similarity=0.191  Sum_probs=68.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCc--eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGIT--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~--~vi~~~~~~~~~~~~~i  266 (373)
                      +.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++    +.|.+  +++..+.      .+..
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~------~~~~  141 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG------TQGW  141 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc------ccCC
Confidence            45667889999999999877 7777788887653 26999999988777664    34532  2232221      1100


Q ss_pred             HHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                        ...+.||+|+-..........+.+.|+++ |+++..
T Consensus       142 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       142 --EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             --cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence              01237999986554455567888999997 998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.73  E-value=0.013  Score=53.28  Aligned_cols=102  Identities=22%  Similarity=0.288  Sum_probs=74.8

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....++.||++|+=.|.|+ |.+++-+|+..|. .+|+..+..++..+.+++    +|....+....   .|    +++.
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~D----v~~~  158 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GD----VREG  158 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cc----cccc
Confidence            3567899999999998887 8888889988775 599999999988877753    44332111111   22    2232


Q ss_pred             cCC-CccEEE-ECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDG-GADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~-~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..+ .+|.|| |-...-..++.+.+.|+++ |+++.+-
T Consensus       159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~  195 (256)
T COG2519         159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYS  195 (256)
T ss_pred             ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEc
Confidence            233 799888 6666666899999999997 9999884

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.72  E-value=0.0084  Score=52.69  Aligned_cols=77  Identities=21%  Similarity=0.228  Sum_probs=55.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---CceEEcCCCCCCcc----HHHHHHHhcCCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---ITDFINPATCGDKT----VSQVIKEMTDGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg---a~~vi~~~~~~~~~----~~~~i~~~~~~~  273 (373)
                      -|.+|||+|+ +++|+..++-...+|= +||.+.|++++++.++..-   ...|.|-.+   .+    +.+.+.+-.+ .
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P-~   78 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP-N   78 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC-c
Confidence            3789999987 8999999998889997 9999999999999988643   234444444   33    3333322211 6


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      .++++++.|-
T Consensus        79 lNvliNNAGI   88 (245)
T COG3967          79 LNVLINNAGI   88 (245)
T ss_pred             hheeeecccc
Confidence            7999998873

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.011  Score=55.00  Aligned_cols=78  Identities=14%  Similarity=0.254  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccHHHHHHH---hcCCCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKE---MTDGGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~---~~~~~~d~  276 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+  ..++.+.+.+   ...+.+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence            4678999998 9999999998888999 99999999988887776665433 23322  1223222332   23347999


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      ++++.|
T Consensus        80 li~~Ag   85 (277)
T PRK05993         80 LFNNGA   85 (277)
T ss_pred             EEECCC
Confidence            999876

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0095  Score=55.23  Aligned_cols=77  Identities=19%  Similarity=0.305  Sum_probs=54.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCFE  279 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~vid  279 (373)
                      +++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+  ..++.+.+.....  +++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence            47899998 9999999999989999 99999999888777666555333 33333  1333333333322  37999999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9883

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.011  Score=53.20  Aligned_cols=78  Identities=14%  Similarity=0.178  Sum_probs=52.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCcc-HHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT-VSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~-~~~~i~~~~~~~~d~vid~~  281 (373)
                      ++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+++++...++..+- .+.+ +.+.+..+..+++|++|.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDM-NDPASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCC-CCHHHHHHHHHHhhcCCCCEEEEcC
Confidence            47899998 9999998888888899 9999999887776665554322322221 1133 33333333334799999877


Q ss_pred             CC
Q 017335          282 GL  283 (373)
Q Consensus       282 g~  283 (373)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            53

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.70  E-value=0.0032  Score=54.29  Aligned_cols=105  Identities=21%  Similarity=0.228  Sum_probs=67.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC-CCCC-------------CccHHHHHHH
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-ATCG-------------DKTVSQVIKE  268 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~-~~~~-------------~~~~~~~i~~  268 (373)
                      ..+|+|+|+|.+|+.|+.+++.+|+ +|+..+...++.+..+..++..+... ....             .......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            4789999999999999999999999 99999999999988888776544221 1100             0112222222


Q ss_pred             hcCCCccEEEEC-C--C--CHH-HHHHHHHHhccCCceEEEEcccCCC
Q 017335          269 MTDGGADYCFEC-I--G--LTS-VMNDAFNSSREGWGKTVILGVEMHG  310 (373)
Q Consensus       269 ~~~~~~d~vid~-~--g--~~~-~~~~~~~~l~~~~G~~v~~G~~~~~  310 (373)
                      ... .+|+||.+ .  +  .+. .....++.|+++ ..++++....++
T Consensus        99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~gG  144 (168)
T PF01262_consen   99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQGG  144 (168)
T ss_dssp             HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT-
T ss_pred             HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCCC
Confidence            211 57888842 2  1  111 245677889997 899999876554

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.67  E-value=0.034  Score=48.06  Aligned_cols=91  Identities=22%  Similarity=0.332  Sum_probs=63.4

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC-
Q 017335          206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL-  283 (373)
Q Consensus       206 VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-  283 (373)
                      |+|+|+ |.+|...++.+...|. +|+++.|++++.+.  ..+.+ ++..+-   .+. +.+.+... ++|.||.+.|. 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL---FDP-DSVKAALK-GADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence            789998 9999999999999998 99999999998877  33443 333333   222 22333222 79999999984 


Q ss_pred             ---HHHHHHHHHHhccCCc--eEEEEcc
Q 017335          284 ---TSVMNDAFNSSREGWG--KTVILGV  306 (373)
Q Consensus       284 ---~~~~~~~~~~l~~~~G--~~v~~G~  306 (373)
                         ......+++.++.. |  +++.++.
T Consensus        72 ~~~~~~~~~~~~a~~~~-~~~~~v~~s~   98 (183)
T PF13460_consen   72 PKDVDAAKNIIEAAKKA-GVKRVVYLSS   98 (183)
T ss_dssp             TTHHHHHHHHHHHHHHT-TSSEEEEEEE
T ss_pred             ccccccccccccccccc-ccccceeeec
Confidence               23355666666554 4  6776664

...

>PRK00811 spermidine synthase; Provisional

Probab=96.67  E-value=0.012  Score=55.24  Aligned_cols=96  Identities=19%  Similarity=0.184  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC------C--c---eEEcCCCCCCccHHHHHHHh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG------I--T---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg------a--~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...++||++|+|. |..+..+++..+..+|.+++.+++-.+.+++.-      .  +   +++.      .+..+.+.. 
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE-  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence            4567999999877 777778888777779999999999888887621      1  1   1222      223333333 


Q ss_pred             cCCCccEEEECC-CC---------HHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCFECI-GL---------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vid~~-g~---------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..+.+|+|+-.. ..         ...+..+.+.|+++ |.++...
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            344899999432 11         23467888999997 9988753

>PLN02366 spermidine synthase

Probab=96.63  E-value=0.026  Score=53.53  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=65.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC---------ceEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI---------TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga---------~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.+++. ..         -+++.      .|..+.+++.
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~  161 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA  161 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence            35578999999876 66677888887766899999999877777763 11         01221      2333334433


Q ss_pred             cCCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .++.+|+|| |...         ....++.+.+.|+++ |.++.-+
T Consensus       162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            334799999 4332         123577899999997 9987654

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.62  E-value=0.022  Score=53.02  Aligned_cols=153  Identities=18%  Similarity=0.126  Sum_probs=100.0

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCC--------CCccHHHHHHH
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC--------GDKTVSQVIKE  268 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~--------~~~~~~~~i~~  268 (373)
                      .+...++..+++.|.|..|+.++..++..|+ .|...+...++.+..+++|+...-..+++        -.++|..+-.+
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence            3445677889999999999999999999999 89999989999988888887533222211        11244443333


Q ss_pred             hc-CC--CccEEEECCC---C---HHHHHHHHHHhccCCceEEEEcccCCCC-ccccCHHHHhh-CcEEEEeecCCCC--
Q 017335          269 MT-DG--GADYCFECIG---L---TSVMNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEILK-GRSVCGTYFGGLK--  335 (373)
Q Consensus       269 ~~-~~--~~d~vid~~g---~---~~~~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~~-~~~i~g~~~~~~~--  335 (373)
                      +. ..  ++|+||-+.=   .   ..........+++| +.++++...++++ .+.-+-.-... +.+|+|...-..+  
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a  315 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLA  315 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhh
Confidence            32 22  8999997632   2   12456788999997 9999998866654 22222222233 7899987421111  


Q ss_pred             ------chhHHHHHHHHHHcCC
Q 017335          336 ------PRSDIATLAQKYLDKV  351 (373)
Q Consensus       336 ------~~~~~~~~~~~~~~g~  351 (373)
                            +..++-.+++++-+.+
T Consensus       316 ~~aS~LYa~Nl~~~l~ll~~~~  337 (356)
T COG3288         316 AQASQLYATNLVNLLKLLCKKK  337 (356)
T ss_pred             hhHHHHHHHHHHHHHHHHhccC
Confidence                  2355666666665543

>PRK12742 oxidoreductase; Provisional

Probab=96.61  E-value=0.049  Score=49.01  Aligned_cols=100  Identities=21%  Similarity=0.293  Sum_probs=62.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH-HHcCCceE-EcCCCCCCccHHHHHHHhcCCCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~-~~lga~~v-i~~~~~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+  ...+.+.+.+  .+++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l   79 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL   79 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence            4789999998 9999999999999999 7877654 44444443 44565432 22222  1223333322  1369999


Q ss_pred             EECCCCHH-------------------------HHHHHHHHhccCCceEEEEccc
Q 017335          278 FECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       278 id~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      |++.|...                         ....+.+.++.+ |+++.++..
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~  133 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV  133 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence            99877411                         113344556676 899988763

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.61  E-value=0.021  Score=49.22  Aligned_cols=97  Identities=13%  Similarity=0.181  Sum_probs=65.6

Q ss_pred             hccchhhhhHHHHHHHHhCCCCCCEEEEECCCh-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       181 a~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~-vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      ...|+...++...+.+...--.+.+|+|+|+|. +|..++..++..|+ +|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence            445544444444333333346889999999986 59999999999999 8888886521                     


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                       +..+.+     ..+|+||.+++.+..+..  +.++++ -.+++++.+.
T Consensus        80 -~l~~~l-----~~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr  119 (168)
T cd01080          80 -NLKEHT-----KQADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR  119 (168)
T ss_pred             -hHHHHH-----hhCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence             121111     168999999998764333  357776 8888888753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.61  E-value=0.025  Score=55.11  Aligned_cols=96  Identities=15%  Similarity=0.087  Sum_probs=68.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---C-ceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---I-TDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg---a-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .+|||+|+|.+|+.+++.+...|-.+|.+.+++.++.+.+....   . ...+|-.+      .+++.++.. ++|+||+
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d------~~al~~li~-~~d~VIn   74 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD------VDALVALIK-DFDLVIN   74 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC------hHHHHHHHh-cCCEEEE
Confidence            47999999999999999988888449999999999988886653   2 23454443      223333333 4599999


Q ss_pred             CCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          280 CIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +.+.......+-.+++.+ =.+++....
T Consensus        75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~  101 (389)
T COG1748          75 AAPPFVDLTILKACIKTG-VDYVDTSYY  101 (389)
T ss_pred             eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence            999877565555666665 667776554

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.037  Score=50.26  Aligned_cols=103  Identities=14%  Similarity=0.130  Sum_probs=61.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh-HHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+.+    +..+.. ..+..+-...+++.+.+.+...  +
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4679999998 9999999998888999 8988887643 33222    222322 2222221111233333333222  3


Q ss_pred             CccEEEECCCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLT-------------------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++|+++.+.+..                   ..++.+.+.+..+ |+++.++.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            689999776532                   2345555556665 88888865

>PRK06182 short chain dehydrogenase; Validated

Probab=96.59  E-value=0.012  Score=54.57  Aligned_cols=79  Identities=14%  Similarity=0.259  Sum_probs=55.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccHHHHHHHhc--CCCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~~~--~~~~d~v  277 (373)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+  .+++.+.+.+..  .+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence            3678999998 9999999999888999 99999999888766655554322 23222  233333343332  2379999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      |++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            998873

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.03  Score=51.53  Aligned_cols=81  Identities=20%  Similarity=0.259  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.. .++..+-...+++.+.+.+...  +.+|+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999998 9999999999989999 999999988765554 344432 2222222112333333333222  37899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++.+.|.
T Consensus        84 lv~~ag~   90 (261)
T PRK08265         84 LVNLACT   90 (261)
T ss_pred             EEECCCC
Confidence            9998773

>PRK14967 putative methyltransferase; Provisional

Probab=96.55  E-value=0.045  Score=49.38  Aligned_cols=98  Identities=16%  Similarity=0.169  Sum_probs=65.8

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhc
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ....++++++||-+|+|. |..+..+++. +..+|++++.+++..+.+++    .+.. .+++.      ++.+.   ..
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~------d~~~~---~~   98 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG------DWARA---VE   98 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC------chhhh---cc
Confidence            445678899999999987 8888888875 55599999999988776543    3432 23322      23221   12


Q ss_pred             CCCccEEEECCC---C------------------------HHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFECIG---L------------------------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .+.||+|+...+   .                        ...+..+.+.|+++ |+++.+-
T Consensus        99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967         99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            238999996521   0                        11355678899997 9988763

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.55  E-value=0.0023  Score=59.70  Aligned_cols=97  Identities=18%  Similarity=0.282  Sum_probs=61.7

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i  266 (373)
                      +.++.++++|++||-+|+|- |..+..+++..|+ +|++++.+++..+++++    .|..   .+...      ++    
T Consensus        54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~------D~----  121 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ------DY----  121 (273)
T ss_dssp             HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-------G----
T ss_pred             HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe------ec----
Confidence            56788999999999999974 6677788888899 99999999998888753    4521   22221      12    


Q ss_pred             HHhcCCCccEEEE-----CCCC---HHHHHHHHHHhccCCceEEEE
Q 017335          267 KEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       267 ~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +++. +.||.|+.     .+|.   +..+..+.+.|+|+ |+++.-
T Consensus       122 ~~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq  165 (273)
T PF02353_consen  122 RDLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQ  165 (273)
T ss_dssp             GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEE
T ss_pred             cccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            2222 27898874     4443   34688899999997 998744

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.014  Score=53.29  Aligned_cols=82  Identities=13%  Similarity=0.173  Sum_probs=54.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cC-CceEEcCCCCCCccHHHHHHHhc--CC
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FG-ITDFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lg-a~~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      -.+++|+|+|+ |.+|..++..+...|+ +|+++.+++++.+.+..    .+ ..+++..+-....++.+.+.+..  .+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35789999998 9999999999999999 89999998887655432    12 12233222211233433333322  23


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|++|.+.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999998883

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.54  E-value=0.037  Score=51.58  Aligned_cols=113  Identities=19%  Similarity=0.282  Sum_probs=70.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce---EEcCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD---FINPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~---vi~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .+++|+|+|+ +++|.+.+.-.-..|+ +++.+.+..++++.+    ++.+..+   ++--+-...++..+.+.+..  -
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            5789999999 8999998887888898 777777777766665    3455433   22122111233333433322  2


Q ss_pred             CCccEEEECCCCHH-------------------------HHHHHHHHhccCC-ceEEEEcccCCCCcccc
Q 017335          272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGW-GKTVILGVEMHGSPISL  315 (373)
Q Consensus       272 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~  315 (373)
                      |++|+.++..|-..                         ....++..|++.+ |+|+.++.-.+...+|+
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~  159 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF  159 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence            48999999877421                         2344566665544 99999987555444444

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.038  Score=50.08  Aligned_cols=81  Identities=19%  Similarity=0.143  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.    ..+.. .++..+-...+++.+.+.+...  ++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999988999 8999998877655432    22322 2222222111222222222211  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (250)
T PRK12939         85 LDGLVNNAGI   94 (250)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.51  E-value=0.012  Score=54.72  Aligned_cols=104  Identities=15%  Similarity=0.270  Sum_probs=75.2

Q ss_pred             HHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHH
Q 017335          191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVS  263 (373)
Q Consensus       191 ~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~  263 (373)
                      +..+.+..+++||++||=+|+|- |.+++-+|+..|. +|++++.+++..+.+++    .|..   +++-.         
T Consensus        61 ~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~---------  129 (283)
T COG2230          61 LDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ---------  129 (283)
T ss_pred             HHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---------
Confidence            34467889999999999999987 7788899999999 99999999998877754    5533   12111         


Q ss_pred             HHHHHhcCCCccEEEE-----CCCC---HHHHHHHHHHhccCCceEEEEcccC
Q 017335          264 QVIKEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       264 ~~i~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                       ..+...+ .||-|+.     .+|.   +..+..+.+.|+++ |++++.....
T Consensus       130 -d~rd~~e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~  179 (283)
T COG2230         130 -DYRDFEE-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITG  179 (283)
T ss_pred             -ccccccc-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecC
Confidence             1122222 4777763     4554   34688899999997 9998776543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.51  E-value=0.024  Score=50.11  Aligned_cols=81  Identities=22%  Similarity=0.236  Sum_probs=59.1

Q ss_pred             CCCEEEEECC--ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC-ceEEcCCC-CCCccHHHHHHHhcCCCccE
Q 017335          202 VGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI-TDFINPAT-CGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~--G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga-~~vi~~~~-~~~~~~~~~i~~~~~~~~d~  276 (373)
                      ....|||+|+  |++|.+.+.=....|+ .|+++.|.-+....+. ++|. ..-+|-.+ +....+...+++.+.|+.|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            4568999986  8999998888888999 9999999999888776 6673 22333333 11123555666666778999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      .++..|.
T Consensus        85 L~NNAG~   91 (289)
T KOG1209|consen   85 LYNNAGQ   91 (289)
T ss_pred             EEcCCCC
Confidence            9997774

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.041  Score=52.84  Aligned_cols=79  Identities=20%  Similarity=0.140  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-E--EcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-F--INPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-v--i~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .+.+|+|+|+ |++|..+++.+...|+ +|+++++++++.+.+.    ..|.+. .  .|-.+  .+++.+.+.....  
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence            4679999998 9999999999999999 8999999887765442    345432 2  22222  1233333332221  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|++|++.|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.02  Score=51.76  Aligned_cols=77  Identities=17%  Similarity=0.275  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceE-EcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~v-i~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+   .+..+.+.+. .+++|++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence            4679999998 8999999999999999 89999998877765543 444322 23322   2222222222 23799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        83 ~~ag~   87 (245)
T PRK07060         83 NCAGI   87 (245)
T ss_pred             ECCCC
Confidence            98874

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.48  E-value=0.018  Score=50.60  Aligned_cols=97  Identities=18%  Similarity=0.203  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ++++.+||-+|+|. |..++.+++.....+|++++.+++..+.++    +.+.+.+ ....   .+..+ +. . .+.+|
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~-~-~~~fD  114 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FG-Q-EEKFD  114 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CC-C-CCCcc
Confidence            55689999999876 666666666544339999999988776664    3454321 1111   12211 11 1 23799


Q ss_pred             EEEEC-CC-CHHHHHHHHHHhccCCceEEEEc
Q 017335          276 YCFEC-IG-LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       276 ~vid~-~g-~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +|+-. .. -...+..+.+.|+++ |+++.+-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            99953 22 234677889999997 9998773

>PRK04148 hypothetical protein; Provisional

Probab=96.48  E-value=0.018  Score=47.44  Aligned_cols=96  Identities=17%  Similarity=0.200  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      ....+.+++++|.| .|...+..+..+|. +|+++|.+++..+.+++.+.+.+.+.--  +.++  .+    .+++|+|+
T Consensus        13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~liy   82 (134)
T PRK04148         13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLIY   82 (134)
T ss_pred             ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEEE
Confidence            33456889999999 78766666667899 9999999999999898887654432211  1111  11    13799999


Q ss_pred             ECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          279 ECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ..-..++....+++.-++-+..++..
T Consensus        83 sirpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence            98888885556666555531444444

>PRK08017 oxidoreductase; Provisional

Probab=96.45  E-value=0.013  Score=53.50  Aligned_cols=77  Identities=18%  Similarity=0.291  Sum_probs=54.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccH---HHHHHHhcCCCccEEE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTV---SQVIKEMTDGGADYCF  278 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~---~~~i~~~~~~~~d~vi  278 (373)
                      ++|||+|+ |++|...++.+...|+ +|++++++.++.+.+++.+++.+ .|..+  ..++   .+.+.+...+.+|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence            57999998 9999999999999999 89999999988888777776443 22222  1222   2233333334789999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      .+.|.
T Consensus        80 ~~ag~   84 (256)
T PRK08017         80 NNAGF   84 (256)
T ss_pred             ECCCC
Confidence            88763

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.45  E-value=0.044  Score=56.03  Aligned_cols=46  Identities=11%  Similarity=-0.033  Sum_probs=39.4

Q ss_pred             HhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          197 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      ..+.+.|++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l  120 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL  120 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence            445678999999998 9999999999988999 999999998876544

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.45  E-value=0.014  Score=51.70  Aligned_cols=98  Identities=16%  Similarity=0.238  Sum_probs=63.2

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceEEcCCCCCCccHHHHHHHhc
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .+.....++.+||-+|+|. |..+..+++. |. +|+++|.+++..+.+++.    +...+ +...   .++    .+..
T Consensus        23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~----~~~~   91 (197)
T PRK11207         23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDL----NNLT   91 (197)
T ss_pred             HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cCh----hhCC
Confidence            3444566788999999987 7777888875 77 999999999877666542    22211 1111   122    1221


Q ss_pred             -CCCccEEEECCC----C----HHHHHHHHHHhccCCceEEEE
Q 017335          271 -DGGADYCFECIG----L----TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       271 -~~~~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       ++.+|+|+....    .    ...+..+.+.|+++ |.++.+
T Consensus        92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~  133 (197)
T PRK11207         92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV  133 (197)
T ss_pred             cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence             237999996533    1    24577888899997 996544

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.45  E-value=0.011  Score=55.14  Aligned_cols=99  Identities=17%  Similarity=0.191  Sum_probs=72.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      ...|.|+|+|.+|.-++.+|..+|+ +|..++.+.+|++.+..+-..+  .+-+..   .++.+.+.     ++|++|.+
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v~-----~aDlvIga  238 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAVK-----KADLVIGA  238 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHhh-----hccEEEEE
Confidence            4467888999999999999999999 9999999999999998744333  222221   33333332     68888875


Q ss_pred             CC--C----HHHHHHHHHHhccCCceEEEEcccCCCC
Q 017335          281 IG--L----TSVMNDAFNSSREGWGKTVILGVEMHGS  311 (373)
Q Consensus       281 ~g--~----~~~~~~~~~~l~~~~G~~v~~G~~~~~~  311 (373)
                      +=  +    ....++..+.|++| +.++++...+++-
T Consensus       239 VLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqGGc  274 (371)
T COG0686         239 VLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQGGC  274 (371)
T ss_pred             EEecCCCCceehhHHHHHhcCCC-cEEEEEEEcCCCc
Confidence            32  1    22567889999997 9999999876653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.44  E-value=0.052  Score=49.18  Aligned_cols=81  Identities=16%  Similarity=0.156  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC--C-ceEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG--I-TDFINPATCGDKTVSQVIKEMT--DGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg--a-~~vi~~~~~~~~~~~~~i~~~~--~~~~  274 (373)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+.  . .+++..+-....++...+.+..  .+.+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999998 9999999988888899 8999999987765543 222  1 1122222211233333333321  1378


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+||.+.|.
T Consensus        83 d~vi~~ag~   91 (251)
T PRK07231         83 DILVNNAGT   91 (251)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.05  Score=48.82  Aligned_cols=80  Identities=18%  Similarity=0.162  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~----~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      +++++||+|+ |.+|..+++.+...|+ +|++++++.++...    ++..+.. ++..+-....++.+.+.+...  +++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            3789999998 9999999998888899 89999997765332    2223332 222221111233333333222  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+|+.+.|.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998763

>PRK00536 speE spermidine synthase; Provisional

Probab=96.41  E-value=0.014  Score=54.02  Aligned_cols=99  Identities=9%  Similarity=-0.077  Sum_probs=68.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      ...++|||+|+|- |.++-+++|+-.  +|..++.+++-.+..++ +.. ...++...   -++...+.+...+.+|+||
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence            4568999998865 667778888863  99999999998888887 321 01121111   1222223333334899998


Q ss_pred             -ECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          279 -ECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       279 -d~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       |++-.+.....+.++|+++ |.++.-+.
T Consensus       145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence             7777777788999999997 99887643

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.018  Score=52.76  Aligned_cols=87  Identities=17%  Similarity=0.174  Sum_probs=55.9

Q ss_pred             HhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCc--eEEcCCCCCCccHHHHHHHhcC-
Q 017335          197 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT--DFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~--~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      ....-++.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+.+. ...  .++..+-....++.+.+.+..+ 
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            344457899999998 9999999999999999 899999987766655432 211  2222222111222222332211 


Q ss_pred             -CCccEEEECCCCH
Q 017335          272 -GGADYCFECIGLT  284 (373)
Q Consensus       272 -~~~d~vid~~g~~  284 (373)
                       +++|+||.+.|..
T Consensus        84 ~~~~d~vi~~ag~~   97 (264)
T PRK12829         84 FGGLDVLVNNAGIA   97 (264)
T ss_pred             hCCCCEEEECCCCC
Confidence             3799999988753

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.40  E-value=0.077  Score=46.76  Aligned_cols=104  Identities=17%  Similarity=0.330  Sum_probs=65.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      +.....++++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++..  +++..+      ..+.+.
T Consensus        32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d------~~~~~~  104 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGS------APECLA  104 (196)
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECc------hHHHHh
Confidence            34556778999999998865 5566667766533399999999988777653    4543  233322      222222


Q ss_pred             HhcCCCccE-EEECCCC-HHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTDGGADY-CFECIGL-TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+. ..+|. +++.... ...++.+.+.|++| |+++....
T Consensus       105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            222 23444 4443322 35688999999997 99887743

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.019  Score=52.61  Aligned_cols=79  Identities=23%  Similarity=0.358  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++...+ .|..+  ..++.+.+.+...  +++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4789999998 9999999999999999 999999887765544 34443222 23222  1223233332221  37899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9988763

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.39  E-value=0.026  Score=55.85  Aligned_cols=99  Identities=11%  Similarity=0.054  Sum_probs=64.0

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      .+--.+.+|||+|+|.+|.+++..+...|+.+++++.++.++.+.+. +++...++        .+ +.+.+.. ..+|+
T Consensus       176 ~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~--------~~-~~l~~~l-~~aDi  245 (414)
T PRK13940        176 LDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAH--------YL-SELPQLI-KKADI  245 (414)
T ss_pred             hcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEe--------cH-HHHHHHh-ccCCE
Confidence            33346789999999999999999999999879999999988766654 45421222        12 1222221 26999


Q ss_pred             EEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          277 CFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       277 vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      ||+|++.+..+-. .+.++...=.+++++.+
T Consensus       246 VI~aT~a~~~vi~-~~~~~~~~~~~iDLavP  275 (414)
T PRK13940        246 IIAAVNVLEYIVT-CKYVGDKPRVFIDISIP  275 (414)
T ss_pred             EEECcCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence            9999998762211 12222210246777764

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.39  E-value=0.02  Score=58.12  Aligned_cols=74  Identities=19%  Similarity=0.244  Sum_probs=55.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      +.++++|+|+|.|..|++++.+++..|+ +|++.|..+++.+.+++.|+.. +....     ..+.+     ..+|+|+.
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l-----~~~D~VV~   76 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQI-----ADYALVVT   76 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHh-----hcCCEEEE
Confidence            5578999999999999999999999999 9999998777666677778743 32221     11112     25799999


Q ss_pred             CCCCHH
Q 017335          280 CIGLTS  285 (373)
Q Consensus       280 ~~g~~~  285 (373)
                      +.|.+.
T Consensus        77 SpGi~~   82 (488)
T PRK03369         77 SPGFRP   82 (488)
T ss_pred             CCCCCC
Confidence            998654

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.017  Score=55.48  Aligned_cols=80  Identities=20%  Similarity=0.308  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-EEcCCCCCCcc-HHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKT-VSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-vi~~~~~~~~~-~~~~i~~~~--~~  272 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|+.+++++++++.+    ++.|.+. ++..+- .+.+ +.+.+.+..  .+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDV-TDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHHhcC
Confidence            4689999998 8999999999999999 899999998876544    3345432 222121 1122 222222221  24


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.31  E-value=0.051  Score=54.37  Aligned_cols=78  Identities=19%  Similarity=0.383  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHH-HHHcCCceE-EcCCCCCCccHHHHHHHhc--CCCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEI-GKKFGITDF-INPATCGDKTVSQVIKEMT--DGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~-~~~lga~~v-i~~~~~~~~~~~~~i~~~~--~~~~  274 (373)
                      +++++||+|+ |++|...++.+...|+ +|+++++.+  ++.+. .++++...+ +|-.+  ..+..+.+....  .+++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCCC
Confidence            5789999998 9999999999999999 899888743  22222 334554322 33333  122222222222  2368


Q ss_pred             cEEEECCC
Q 017335          275 DYCFECIG  282 (373)
Q Consensus       275 d~vid~~g  282 (373)
                      |++|.+.|
T Consensus       286 d~vi~~AG  293 (450)
T PRK08261        286 DIVVHNAG  293 (450)
T ss_pred             CEEEECCC
Confidence            99999988

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.26  E-value=0.0099  Score=54.46  Aligned_cols=106  Identities=16%  Similarity=0.228  Sum_probs=66.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCce-E-EcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITD-F-INPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~-v-i~~~~~~~~~~~~~i  266 (373)
                      +.-..+++||++|+=.|.|+ |.++..+++..|. .+|+..+.++++.+.++    .+|... | +..++.....+    
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~----  106 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF----  106 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence            45568999999999998876 7777778877662 39999999999888775    355432 1 22222001111    


Q ss_pred             HHhcCCCccEEE-ECCCCHHHHHHHHHHh-ccCCceEEEEc
Q 017335          267 KEMTDGGADYCF-ECIGLTSVMNDAFNSS-REGWGKTVILG  305 (373)
Q Consensus       267 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~G  305 (373)
                      .+-.+..+|.|| |-..--..+..+.+.| ++| |+++.+.
T Consensus       107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fs  146 (247)
T PF08704_consen  107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFS  146 (247)
T ss_dssp             STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEE
T ss_pred             cccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEEC
Confidence            011123789888 6655555799999999 897 9999884

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.26  E-value=0.04  Score=51.41  Aligned_cols=93  Identities=15%  Similarity=-0.002  Sum_probs=62.0

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      .+...+++|+|+|+|+.+.+++..++.+|+.+|.++.|+.++.+.+.+ ++..            +...+   ....+|+
T Consensus       117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~---~~~~~dl  181 (272)
T PRK12550        117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDL---GGIEADI  181 (272)
T ss_pred             cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhc---ccccCCE
Confidence            344556799999999999999999999999789999999988776643 3311            10011   1126899


Q ss_pred             EEECCCCHHH-------HHHHHHHhccCCceEEEEcc
Q 017335          277 CFECIGLTSV-------MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       277 vid~~g~~~~-------~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |++|+.....       .......+++. ..++++-.
T Consensus       182 vINaTp~Gm~~~~~~~~~pi~~~~l~~~-~~v~D~vY  217 (272)
T PRK12550        182 LVNVTPIGMAGGPEADKLAFPEAEIDAA-SVVFDVVA  217 (272)
T ss_pred             EEECCccccCCCCccccCCCCHHHcCCC-CEEEEeec
Confidence            9999863220       01123456775 77777744

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.25  E-value=0.026  Score=51.87  Aligned_cols=81  Identities=19%  Similarity=0.243  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ ++.. .++..+-....++...+.+...  +.+|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4689999998 8999999999999999 89999999887766543 3321 2222221111233333333322  37899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        84 li~~ag~   90 (263)
T PRK06200         84 FVGNAGI   90 (263)
T ss_pred             EEECCCC
Confidence            9998873

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.25  E-value=0.038  Score=52.46  Aligned_cols=91  Identities=21%  Similarity=0.405  Sum_probs=63.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      .+|.|+|.|.+|...+..++..|. .+|+++++++++.+.+++.|....+.      .+..+.+     ..+|+||.|+.
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence            579999999999999998888884 38999999999888888887532211      1111111     26899999998


Q ss_pred             CHHH---HHHHHHHhccCCceEEEEcc
Q 017335          283 LTSV---MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       283 ~~~~---~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....   +..+...++++ ..++.+|.
T Consensus        76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            6542   33344456675 66776654

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.027  Score=52.05  Aligned_cols=80  Identities=19%  Similarity=0.189  Sum_probs=52.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. .++..+++..+-...+++.+.+.....  +++|+++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999998 9999999988888899 8999999888776543 344222322222112333333333322  3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        84 ~~ag~   88 (273)
T PRK07825         84 NNAGV   88 (273)
T ss_pred             ECCCc
Confidence            98873

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.24  E-value=0.04  Score=48.98  Aligned_cols=35  Identities=29%  Similarity=0.271  Sum_probs=32.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .+.+|+|+|.|++|..+++.+..+|+.++..+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45789999999999999999999999899999976

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.22  E-value=0.06  Score=49.01  Aligned_cols=105  Identities=17%  Similarity=0.332  Sum_probs=76.3

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--EEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--vi~~~~~~~~~~~~~i~  267 (373)
                      +......++|++||=+|+|. |-.+..+++..|-.+|+++|.++.-++.+++    .|...  .+..+          ..
T Consensus        43 ~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~d----------Ae  111 (238)
T COG2226          43 LISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGD----------AE  111 (238)
T ss_pred             HHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEec----------hh
Confidence            34445667999999998877 8999999999986699999999998888864    22221  11111          12


Q ss_pred             Hh-cCC-CccEEEECCCC------HHHHHHHHHHhccCCceEEEEcccCCC
Q 017335          268 EM-TDG-GADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVEMHG  310 (373)
Q Consensus       268 ~~-~~~-~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~~~~~  310 (373)
                      ++ .++ .||+|..+.|-      +..+.++.+.|+|+ |+++.+......
T Consensus       112 ~LPf~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p~  161 (238)
T COG2226         112 NLPFPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKPD  161 (238)
T ss_pred             hCCCCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCCC
Confidence            22 233 89999877663      44688999999997 999988875543

>PRK01581 speE spermidine synthase; Validated

Probab=96.21  E-value=0.068  Score=51.60  Aligned_cols=98  Identities=15%  Similarity=0.133  Sum_probs=65.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--------C---c--eEEcCCCCCCccHHHHH
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--------I---T--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg--------a---~--~vi~~~~~~~~~~~~~i  266 (373)
                      .....+|||+|+|. |.++..+++..+..+|++++.+++-.+.++++.        +   .  +++.      .|..+.+
T Consensus       148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL  220 (374)
T PRK01581        148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL  220 (374)
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence            34457999999764 667788888766669999999999888888621        0   0  1111      2233333


Q ss_pred             HHhcCCCccEEE-ECCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .. ..+.+|+|| |....          ...+..+.+.|+++ |.++....
T Consensus       221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            32 334899999 43221          22577889999997 99877643

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=96.21  E-value=0.13  Score=48.37  Aligned_cols=116  Identities=22%  Similarity=0.226  Sum_probs=75.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceEEcCCCCC-Cc----------
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFINPATCG-DK----------  260 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~--~~~~~~~~~~~lga~~vi~~~~~~-~~----------  260 (373)
                      +.+...++||++|+=--+|.+|.+.+.+++.+|++-+++..  .+.+|++.++.+||.-++.+.... ..          
T Consensus        53 Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~  132 (300)
T COG0031          53 AEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELA  132 (300)
T ss_pred             HHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHH
Confidence            34566699999655444599999999999999994444443  266889999999998776665210 00          


Q ss_pred             ------------------------cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          261 ------------------------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       261 ------------------------~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                                              ....++.+.+++.+|.++-.+|..-++.-.-+.|+..+..+-.++..+.
T Consensus       133 ~~~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~vdP~  205 (300)
T COG0031         133 AEIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAVDPE  205 (300)
T ss_pred             HhCCCceEchhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEECCC
Confidence                                    0122333333445888888888777777777777664343444554343

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.19  E-value=0.036  Score=49.73  Aligned_cols=103  Identities=17%  Similarity=0.234  Sum_probs=64.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEE------cC-CCCCCcc-HHHHHHHh
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI------NP-ATCGDKT-VSQVIKEM  269 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi------~~-~~~~~~~-~~~~i~~~  269 (373)
                      .+.++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+. +.+.....      .. .. ..-+ +...+.++
T Consensus        31 ~~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~  106 (213)
T TIGR03840        31 GLPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRA-GNIEIFCGDFFAL  106 (213)
T ss_pred             CCCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeec-CceEEEEccCCCC
Confidence            346778999999987 888888875 799 9999999998887753 23321000      00 00 0000 11111111


Q ss_pred             c---CCCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 T---DGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~---~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .   .+.+|.|+|+..-        ...+..+.++|++| |++++.+.
T Consensus       107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence            1   1368999997541        33578899999997 98777765

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.19  E-value=0.056  Score=50.76  Aligned_cols=95  Identities=14%  Similarity=0.064  Sum_probs=61.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cC----CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG----ITDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lg----a~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.+ ++    ...+...     .++.+.+     ..+|
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~-----~~aD  194 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAAL-----AAAD  194 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhhh-----CCCC
Confidence            356899999999999999999999999899999999888776543 32    1122211     1111111     2689


Q ss_pred             EEEECCCCHH----HHHHHHHHhccCCceEEEEcc
Q 017335          276 YCFECIGLTS----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g~~~----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +||+|+....    ........++++ ..++++-.
T Consensus       195 iVInaTp~Gm~~~~~~~~~~~~l~~~-~~v~DivY  228 (284)
T PRK12549        195 GLVHATPTGMAKHPGLPLPAELLRPG-LWVADIVY  228 (284)
T ss_pred             EEEECCcCCCCCCCCCCCCHHHcCCC-cEEEEeee
Confidence            9999965321    001122457775 77777744

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.064  Score=49.16  Aligned_cols=77  Identities=17%  Similarity=0.187  Sum_probs=51.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cC-C-ceE--EcCCCCCCccHHHHHHHhc---CCCc
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-I-TDF--INPATCGDKTVSQVIKEMT---DGGA  274 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lg-a-~~v--i~~~~~~~~~~~~~i~~~~---~~~~  274 (373)
                      +++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+ . .++  .|-.+  ..++.+.+.+..   .+++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            47999998 9999999998888999 99999998887766543 22 1 122  23222  123333333321   3479


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++.+.|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.17  E-value=0.11  Score=48.41  Aligned_cols=104  Identities=12%  Similarity=0.196  Sum_probs=64.7

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChh---HHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+   +++|+++++.+...|+ +|+.++++++   +.+.+ ++++....+..+-...+++.+.+.+...  +
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999987   4899999998888999 8998888753   22322 3345333322222112333333333322  4


Q ss_pred             CccEEEECCCCH--------------H---------------HHHHHHHHhccCCceEEEEccc
Q 017335          273 GADYCFECIGLT--------------S---------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       273 ~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .+|+++++.|..              .               ....++..++.+ |+++.++..
T Consensus        83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~  145 (274)
T PRK08415         83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL  145 (274)
T ss_pred             CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence            799999988731              0               234456667786 999888653

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.16  E-value=0.014  Score=54.54  Aligned_cols=96  Identities=20%  Similarity=0.138  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcCC-CccEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDG-GADYC  277 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~~-~~d~v  277 (373)
                      .++++++|+|+|+.+.+++..+...|+++|+++.|+.+|.+.+.+ ++... .+....         ..++... .+|++
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~---------~~~~~~~~~~dli  194 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA---------LADLEGLEEADLL  194 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc---------ccccccccccCEE
Confidence            358999999999999999999999998899999999999777754 33211 000000         0111111 48999


Q ss_pred             EECCCCHHHHH-----HHHHHhccCCceEEEEcc
Q 017335          278 FECIGLTSVMN-----DAFNSSREGWGKTVILGV  306 (373)
Q Consensus       278 id~~g~~~~~~-----~~~~~l~~~~G~~v~~G~  306 (373)
                      ||+++....-.     .....+++. -.++++-.
T Consensus       195 INaTp~Gm~~~~~~~~~~~~~l~~~-~~v~D~vY  227 (283)
T COG0169         195 INATPVGMAGPEGDSPVPAELLPKG-AIVYDVVY  227 (283)
T ss_pred             EECCCCCCCCCCCCCCCcHHhcCcC-CEEEEecc
Confidence            99987433111     014567775 66666643

>PRK04457 spermidine synthase; Provisional

Probab=96.16  E-value=0.065  Score=49.70  Aligned_cols=94  Identities=16%  Similarity=0.222  Sum_probs=66.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC----c--eEEcCCCCCCccHHHHHHHhcCCC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI----T--DFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga----~--~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .++.+||++|.|+ |..+..+++.....+|++++.+++-.+.+++. +.    .  +++..      +..+.+... ++.
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~------Da~~~l~~~-~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA------DGAEYIAVH-RHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC------CHHHHHHhC-CCC
Confidence            4567899999987 77888888877544999999999999888763 31    1  23322      333334332 347


Q ss_pred             ccEEE-ECCCC---------HHHHHHHHHHhccCCceEEE
Q 017335          274 ADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       274 ~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~  303 (373)
                      +|+|+ |....         ...++.+.+.|+++ |+++.
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi  175 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV  175 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence            99998 54221         35688999999997 99876

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.031  Score=51.48  Aligned_cols=80  Identities=11%  Similarity=0.156  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+.. +++..+-....++.+.+.+...  ++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 8999999999988999 99999998876554422    2321 2222222111223233333221  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus        88 id~vi~~Ag   96 (263)
T PRK07814         88 LDIVVNNVG   96 (263)
T ss_pred             CCEEEECCC
Confidence            999999877

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.03  Score=52.69  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC--ce-E--EcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TD-F--INPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga--~~-v--i~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +.++.  .. .  .|-.+  ..++.+.+.+...  +
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999999999 899999998876654 34542  11 1  22222  1233333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|++|++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.15  E-value=0.061  Score=51.52  Aligned_cols=103  Identities=16%  Similarity=0.097  Sum_probs=69.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHH-HHCCCCeEEEEcCChhHHHHHHH-----cCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIGKK-----FGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la-~~~G~~~Vi~~~~~~~~~~~~~~-----lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      -+...+++|+|+|..|...+..+ ...++++|.+.++++++.+.+.+     ++.. +...     .+..+.+     ..
T Consensus       124 ~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~-----~~  192 (325)
T PRK08618        124 REDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI-----EE  192 (325)
T ss_pred             CCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH-----hc
Confidence            34567899999999998776554 46788899999999888765432     3432 1111     1232222     26


Q ss_pred             ccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH
Q 017335          274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS  317 (373)
Q Consensus       274 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~  317 (373)
                      +|+|+.|+++.. .... ..+++| -.++.+|.+..+ ..+++.
T Consensus       193 aDiVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~p~-~~E~~~  232 (325)
T PRK08618        193 ADIIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFMPD-MQELPS  232 (325)
T ss_pred             CCEEEEccCCCC-cchH-HhcCCC-cEEEecCCCCcc-cccCCH
Confidence            899999998776 3334 889997 899999986542 335555

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.15  E-value=0.096  Score=46.51  Aligned_cols=82  Identities=32%  Similarity=0.391  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      -.|.+|+|+|.|.+|..+++.+...|+ +|+++++++++.+.+++ +|+. .++.++            +....+|+++-
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~------------l~~~~~Dv~vp   91 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE------------IYSVDADVFAP   91 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh------------hccccCCEEEe
Confidence            357899999999999999999999999 99999999888776654 4653 333221            11115888885


Q ss_pred             CCCCHHHHHHHHHHhcc
Q 017335          280 CIGLTSVMNDAFNSSRE  296 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~  296 (373)
                      |......-...++.++.
T Consensus        92 ~A~~~~I~~~~~~~l~~  108 (200)
T cd01075          92 CALGGVINDDTIPQLKA  108 (200)
T ss_pred             cccccccCHHHHHHcCC
Confidence            54333323344455543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.084  Score=48.25  Aligned_cols=81  Identities=14%  Similarity=0.162  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCc-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+..+.   .+.. +.+..+-...+++...+.+...  +++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999998 8999998888888999 88888888876644433   2322 2222222111223333333322  378


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999883

>PRK09186 flagellin modification protein A; Provisional

Probab=96.11  E-value=0.088  Score=47.95  Aligned_cols=80  Identities=18%  Similarity=0.311  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc----CCc--eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF----GIT--DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~l----ga~--~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .+++|||+|+ |.+|...+..+...|+ +|+++.+++++.+.+ +++    +..  .++..+-..+.++.+.+.+...  
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 899999888776544 222    221  1222222112333333333322  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|+++.+.+
T Consensus        82 ~~id~vi~~A~   92 (256)
T PRK09186         82 GKIDGAVNCAY   92 (256)
T ss_pred             CCccEEEECCc
Confidence            36899998875

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.036  Score=52.14  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.+ +++..+-...+++.+.+....  .+.
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999998 9999999998888899 99999999877655432    2322 222222211123333333221  237


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus       118 id~li~~AG~  127 (293)
T PRK05866        118 VDILINNAGR  127 (293)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.10  E-value=0.11  Score=47.18  Aligned_cols=92  Identities=22%  Similarity=0.207  Sum_probs=61.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCC--eEEEEcCC----hhH--------HHHHHHcCCceEEcCCCCCCccHHHHH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDIN----PEK--------FEIGKKFGITDFINPATCGDKTVSQVI  266 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~--~Vi~~~~~----~~~--------~~~~~~lga~~vi~~~~~~~~~~~~~i  266 (373)
                      -.+.+|+|+|+|+.|..++..+...|++  +|+.++++    .++        .++++.++... .   .   .++.+.+
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence            4567999999999999999999999997  89999998    443        23344443211 0   0   1233333


Q ss_pred             HHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                           .++|++|++++....-...++.+.++ ..++.+.
T Consensus        96 -----~~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls  128 (226)
T cd05311          96 -----KGADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA  128 (226)
T ss_pred             -----hcCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence                 25899999997433224666777775 6666554

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.09  E-value=0.055  Score=50.61  Aligned_cols=95  Identities=17%  Similarity=0.244  Sum_probs=67.3

Q ss_pred             ccchhhhhHHHHHHHHhCC-CCCCEEEEECCCh-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~G~-vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+||+....+. +++..++ -.|++|+|+|.|. +|.-++.++...|+ +|+.+.+..                      
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t----------------------  192 (286)
T PRK14175        137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS----------------------  192 (286)
T ss_pred             CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence            45555444444 3444443 4799999999965 99999999999999 888877532                      


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      .++.+.+     ..+|+||.++|.+..+..  +.++++ ..++++|...
T Consensus       193 ~~l~~~~-----~~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        193 KDMASYL-----KDADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             hhHHHHH-----hhCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence            1221111     168999999999875554  468997 9999999853

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.08  E-value=0.025  Score=53.10  Aligned_cols=76  Identities=12%  Similarity=0.016  Sum_probs=52.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .+.+|+|+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+.+ ++... +...      +..+.+.... ..+|+||+
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~------~~~~~~~~~~-~~~DiVIn  196 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRL------EGDSGGLAIE-KAAEVLVS  196 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceec------cchhhhhhcc-cCCCEEEE
Confidence            57899999999999999999999999899999999888776643 33211 1100      0001111111 26899999


Q ss_pred             CCCCH
Q 017335          280 CIGLT  284 (373)
Q Consensus       280 ~~g~~  284 (373)
                      |++..
T Consensus       197 aTp~g  201 (282)
T TIGR01809       197 TVPAD  201 (282)
T ss_pred             CCCCC
Confidence            98854

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.08  E-value=0.032  Score=51.30  Aligned_cols=80  Identities=14%  Similarity=0.122  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+++. +.. +.+..+-....+..+.+.+...  +.+|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999998 8999999999989999 999999988777666543 321 1221111011223333333322  37899


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      ++++.|
T Consensus        83 li~~Ag   88 (262)
T TIGR03325        83 LIPNAG   88 (262)
T ss_pred             EEECCC
Confidence            999876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.036  Score=50.66  Aligned_cols=81  Identities=19%  Similarity=0.165  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+    .+.. ..+..+-....++.+.+.+...  +.
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999998 8999999999999999 89999998877655432    2322 1222221112333333333221  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.|.
T Consensus        87 id~lv~~ag~   96 (253)
T PRK05867         87 IDIAVCNAGI   96 (253)
T ss_pred             CCEEEECCCC
Confidence            9999998773

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.033  Score=50.86  Aligned_cols=79  Identities=19%  Similarity=0.194  Sum_probs=51.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+. .+.+..+-..+.++.+.+.+...  +.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            468999998 8999999999999999 99999998876554432    222 22332222112333333333322  368


Q ss_pred             cEEEECCC
Q 017335          275 DYCFECIG  282 (373)
Q Consensus       275 d~vid~~g  282 (373)
                      |+++++.|
T Consensus        80 d~lI~~ag   87 (252)
T PRK07677         80 DALINNAA   87 (252)
T ss_pred             cEEEECCC
Confidence            99999887

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.05  E-value=0.18  Score=44.88  Aligned_cols=92  Identities=12%  Similarity=-0.020  Sum_probs=56.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+.+|||+|+|.+|...+..+...|+ +|++++.... ....+...+.- .+..+.     +.+.  .+  .++|+||-+
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i-~~~~~~-----~~~~--~l--~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKI-RWKQKE-----FEPS--DI--VDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCE-EEEecC-----CChh--hc--CCceEEEEc
Confidence            57899999999999999988888998 8888875432 21222222211 122221     1100  01  278999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++.+. ++..+...+.. +.++....
T Consensus        78 T~d~e-lN~~i~~~a~~-~~lvn~~d  101 (202)
T PRK06718         78 TNDPR-VNEQVKEDLPE-NALFNVIT  101 (202)
T ss_pred             CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence            99988 56555545454 55665543

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=96.04  E-value=0.077  Score=49.63  Aligned_cols=99  Identities=17%  Similarity=0.203  Sum_probs=67.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCce-EE-cCCCC-CCccHHHHHHHhcCCCccEEE-
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITD-FI-NPATC-GDKTVSQVIKEMTDGGADYCF-  278 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~~-vi-~~~~~-~~~~~~~~i~~~~~~~~d~vi-  278 (373)
                      ++|||+|+|. |-.+-.++|+....++++++.+++=.+.+++. +-.+ .. |++-. ...|-.+-+++... ++|+|| 
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~  155 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV  155 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence            5999998765 66677888988888999999999998888863 2111 00 11110 00233344444333 899999 


Q ss_pred             ECCCC---------HHHHHHHHHHhccCCceEEEEc
Q 017335          279 ECIGL---------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       279 d~~g~---------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      |+...         ...++.+.++|+++ |.++.-.
T Consensus       156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~  190 (282)
T COG0421         156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA  190 (282)
T ss_pred             cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence            66554         55788999999997 9988773

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.039  Score=50.34  Aligned_cols=81  Identities=16%  Similarity=0.202  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .+.+|||+|+ |++|...++.+...|+ +|+.++++++..+...++....  .+..+-....++.+.+.+...  +++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999998 9999999988888999 8999999877655554432211  222222112233333332221  37899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++.+.|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9998874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.00  E-value=0.15  Score=45.85  Aligned_cols=110  Identities=21%  Similarity=0.269  Sum_probs=75.7

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .......++||=+|.+. |..++++|..+. -.+++.+++++++.+.+++    .|.+..+.-.. . .+..+.+.+...
T Consensus        54 L~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~-gdal~~l~~~~~  130 (219)
T COG4122          54 LARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-G-GDALDVLSRLLD  130 (219)
T ss_pred             HHHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-c-CcHHHHHHhccC
Confidence            34556788999888754 778888888876 3389999999999888764    56544221111 0 145555555334


Q ss_pred             CCccEEE-ECCC--CHHHHHHHHHHhccCCceEEEEcccCCC
Q 017335          272 GGADYCF-ECIG--LTSVMNDAFNSSREGWGKTVILGVEMHG  310 (373)
Q Consensus       272 ~~~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~~~  310 (373)
                      +.||+|| |+--  -+..++.+++.|++| |.++.=....++
T Consensus       131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~~G  171 (219)
T COG4122         131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLFGG  171 (219)
T ss_pred             CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeecccCC
Confidence            5899999 4432  345789999999997 998876665444

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.039  Score=51.28  Aligned_cols=80  Identities=15%  Similarity=0.076  Sum_probs=52.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+....  ..+..+-.....+.+.+.+...  +++|++
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            578999998 9999999999888999 899999998887666543211  1221121011223333333222  368999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +.+.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999875

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.97  E-value=0.042  Score=48.53  Aligned_cols=99  Identities=12%  Similarity=0.173  Sum_probs=61.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.+.....++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++    .+..  +....   .++..  ...
T Consensus        22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~--~~~   91 (195)
T TIGR00477        22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA--AAL   91 (195)
T ss_pred             HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh--ccc
Confidence            44445556678999999876 777777776 477 99999999887776643    2322  11111   11110  011


Q ss_pred             cCCCccEEEECCC-----C---HHHHHHHHHHhccCCceEEEE
Q 017335          270 TDGGADYCFECIG-----L---TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       270 ~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       ++.+|+|+.+.-     .   ...+..+.+.|++| |.++.+
T Consensus        92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~  132 (195)
T TIGR00477        92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV  132 (195)
T ss_pred             -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence             237999986422     1   24577888899997 985544

Part of a tellurite-reducing operon tehA and tehB

>PRK08317 hypothetical protein; Provisional

Probab=95.95  E-value=0.087  Score=47.35  Aligned_cols=103  Identities=21%  Similarity=0.349  Sum_probs=70.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc--C--C-ceEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF--G--I-TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~l--g--a-~~vi~~~~~~~~~~~~~i~  267 (373)
                      +.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++.  .  . ..++..+.   .++     
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----   81 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----   81 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence            45667889999999999987 888888988874 23899999999888887654  1  1 11222111   110     


Q ss_pred             HhcCCCccEEEECC------CCHHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTDGGADYCFECI------GLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ...++.+|+|+...      .....+..+.+.|+++ |.++....
T Consensus        82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  125 (241)
T PRK08317         82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT  125 (241)
T ss_pred             CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence            12234789988532      2234688999999997 99987653

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.94  E-value=0.055  Score=49.09  Aligned_cols=81  Identities=15%  Similarity=0.227  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d  275 (373)
                      .++++||+|+ |++|...+..+...|+ +|+.+++++.  ..+.+++.+.. +++..+-....++.+.+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999998 8999999988888999 8999988652  22333444432 2222222112334333333322  3699


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++.+.|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.94  E-value=0.061  Score=45.21  Aligned_cols=96  Identities=23%  Similarity=0.160  Sum_probs=62.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      ..+.+++|+|+|.+|...++.+...|..+|++++++.++.+.+ ++++... +....   .+..+    . -.++|+|+.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~---~~~~~----~-~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAY---LDLEE----L-LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceee---cchhh----c-cccCCEEEe
Confidence            4578999999999999999888888644899999998776654 4455321 00000   11111    1 137999999


Q ss_pred             CCCCHHH----HHHHHHHhccCCceEEEEcc
Q 017335          280 CIGLTSV----MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       280 ~~g~~~~----~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |++....    .......++++ ..+++++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence            9886541    11122446775 77787865

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.087  Score=48.83  Aligned_cols=80  Identities=14%  Similarity=0.121  Sum_probs=51.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC-ceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga-~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      +.+|||+|+ |.+|...++.+...|. +|+.+++++++.+.+.+ ++. -+.+..+-...+++.+.+.....  +++|++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999998 9999999988888898 89999998877665543 221 12222221111233333333221  378999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +.+.|.
T Consensus        82 i~~ag~   87 (275)
T PRK08263         82 VNNAGY   87 (275)
T ss_pred             EECCCC
Confidence            999874

>PRK06196 oxidoreductase; Provisional

Probab=95.93  E-value=0.049  Score=51.72  Aligned_cols=81  Identities=15%  Similarity=0.153  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .+.+|||+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++..-+++..+-....++.+.+.+...  +++|++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            4679999998 8999999998888999 8999999887765442 222112222221111233333333322  379999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      |.+.|.
T Consensus       104 i~nAg~  109 (315)
T PRK06196        104 INNAGV  109 (315)
T ss_pred             EECCCC
Confidence            998873

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.92  E-value=0.094  Score=48.28  Aligned_cols=100  Identities=15%  Similarity=0.141  Sum_probs=68.7

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcC-
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      +.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++.-. ..++..+      .    .++.. 
T Consensus        23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~----~~~~~~   91 (258)
T PRK01683         23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------I----ASWQPP   91 (258)
T ss_pred             HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------h----hccCCC
Confidence            34555678899999999976 7777888887643499999999988888765322 2233222      1    11222 


Q ss_pred             CCccEEEECCC------CHHHHHHHHHHhccCCceEEEEc
Q 017335          272 GGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       272 ~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..+|+|+....      ....+..+.+.|++| |+++...
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence            37999985433      234688899999997 9988753

>PRK06484 short chain dehydrogenase; Validated

Probab=95.92  E-value=0.088  Score=53.60  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=68.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-E--EcCCCCCCccHHHHHHHhcC--CC
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-F--INPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-v--i~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      ..++++||+|+ +++|+..++.+...|+ +|+.+++++++.+.+.+ ++... .  .|-.+  .+++.+.+.+...  +.
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR  343 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence            35789999998 8999999999999999 99999998887766644 44322 1  22222  1233333333322  37


Q ss_pred             ccEEEECCCCHH--------------------------HHHHHHHHhccCCceEEEEccc
Q 017335          274 ADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       274 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +|++|.+.|...                          ..+.++..++.+ |+++.++..
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~  402 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI  402 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            999999877420                          133445566665 999988753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.92  E-value=0.14  Score=46.02  Aligned_cols=79  Identities=23%  Similarity=0.294  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-E--EcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v--i~~~~~~~~~~~~~i~~~~~--  271 (373)
                      ++.+|||+|+ |.+|...++.+...|. +|+++.+++++.+.+    +..+... +  .|-.+  +.++.+.+.+...  
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            3578999998 9999999999888999 799999988765443    2334322 2  22222  2233333333322  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +.+|.++.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            368999998864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.92  E-value=0.064  Score=48.64  Aligned_cols=80  Identities=21%  Similarity=0.263  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      +++++||+|+ |++|+.+++.+...|+ +|+.+++++++.+.+.    ..+.. +.+..+-....++.+.+.....  +.
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999999999 8999999887655432    23432 1222221011223333333222  36


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|+||.+.|
T Consensus        83 id~vi~~ag   91 (253)
T PRK08217         83 LNGLINNAG   91 (253)
T ss_pred             CCEEEECCC
Confidence            899999887

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.91  E-value=0.14  Score=50.38  Aligned_cols=102  Identities=19%  Similarity=0.126  Sum_probs=69.6

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .+..+--.+.+|||+|+|-+|.+++..+...|+.+|++..|+.++... ++++|+. ++..+         .+.+.. ..
T Consensus       170 ~~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---------el~~~l-~~  238 (414)
T COG0373         170 KRIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---------ELLEAL-AE  238 (414)
T ss_pred             HHHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---------HHHHhh-hh
Confidence            333343478899999999999999999999998899999999988765 5678853 32211         111111 26


Q ss_pred             ccEEEECCCCHH---HHHHHHHHhccCCc-eEEEEccc
Q 017335          274 ADYCFECIGLTS---VMNDAFNSSREGWG-KTVILGVE  307 (373)
Q Consensus       274 ~d~vid~~g~~~---~~~~~~~~l~~~~G-~~v~~G~~  307 (373)
                      +|+||.+++.+.   .-....+.++.... -+++++.+
T Consensus       239 ~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         239 ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            999999998765   23344455554313 46777764

>PLN02823 spermine synthase

Probab=95.91  E-value=0.073  Score=51.13  Aligned_cols=101  Identities=19%  Similarity=0.137  Sum_probs=63.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-c-eEEc-CCC-CCCccHHHHHHHhcCCCccEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-T-DFIN-PAT-CGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~-~vi~-~~~-~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      ..++|||+|+|. |..+..+++..+..+|++++.+++-.+.+++.-. . ..++ .+- ....|..+.+++ ..+.+|+|
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI  180 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI  180 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence            457899999875 6667778887777799999999999998886321 1 0111 000 000223333432 33489999


Q ss_pred             E-ECCC-----------CHHHHH-HHHHHhccCCceEEEEc
Q 017335          278 F-ECIG-----------LTSVMN-DAFNSSREGWGKTVILG  305 (373)
Q Consensus       278 i-d~~g-----------~~~~~~-~~~~~l~~~~G~~v~~G  305 (373)
                      | |...           ....++ .+.+.|+++ |.++.-.
T Consensus       181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~  220 (336)
T PLN02823        181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA  220 (336)
T ss_pred             EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence            9 5322           122355 688899997 9987543

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.89  E-value=0.15  Score=45.55  Aligned_cols=93  Identities=16%  Similarity=0.109  Sum_probs=61.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .|.+|||+|+|.+|..-++.+...|+ +|.+++.+.. ....+.+.|--..+. ++     +...  .+  .++|+||-+
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~--dl--~~~~lVi~a   76 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDAD--IL--EGAFLVIAA   76 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHH--Hh--CCcEEEEEC
Confidence            46799999999999999999999999 8888876543 233333444222222 22     1111  11  279999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++.+..-..+....+.. |..+....
T Consensus        77 t~d~~ln~~i~~~a~~~-~ilvn~~d  101 (205)
T TIGR01470        77 TDDEELNRRVAHAARAR-GVPVNVVD  101 (205)
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence            99986455666666675 77776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06128 oxidoreductase; Provisional

Probab=95.88  E-value=0.12  Score=48.70  Aligned_cols=103  Identities=17%  Similarity=0.161  Sum_probs=61.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--H----HHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--K----FEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~----~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|...+..+...|+ +|+.+.++.+  +    .+.+++.|... ++..+-....++.+.+.+...  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4689999998 9999999988888999 8887765432  1    12233345322 222221111223233332222  


Q ss_pred             CCccEEEECCCCH--------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +++|++|.+.|..                          ..++.+++.++.+ |+++.++.
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS  192 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGS  192 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECC
Confidence            3799999988731                          0233445556776 89988765

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.061  Score=49.66  Aligned_cols=81  Identities=19%  Similarity=0.258  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eEEcCCCCCCccHHHHHHHhc-CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMT-DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~-~vi~~~~~~~~~~~~~i~~~~-~~~  273 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ +    +.+ ..+..+-....++.+.+.+.. -++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            4789999998 8999999999999999 89999998877655432 2    321 222222211223333333322 237


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus        86 iD~lv~nag~   95 (263)
T PRK08339         86 PDIFFFSTGG   95 (263)
T ss_pred             CcEEEECCCC
Confidence            9999998874

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.87  E-value=0.041  Score=49.19  Aligned_cols=107  Identities=16%  Similarity=0.137  Sum_probs=68.8

Q ss_pred             cchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--EEcCCC
Q 017335          183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPAT  256 (373)
Q Consensus       183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--vi~~~~  256 (373)
                      +..+...++  +.....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+...  ++..+.
T Consensus        61 ~~~p~~~~~--l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~  135 (212)
T PRK00312         61 ISQPYMVAR--MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG  135 (212)
T ss_pred             eCcHHHHHH--HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc
Confidence            333444444  35567789999999999876 55666666654 3 89999999887666643    34322  222211


Q ss_pred             CCCccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          257 CGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       257 ~~~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                            .+   .... +.||+|+...........+.+.|+++ |+++..
T Consensus       136 ------~~---~~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~  174 (212)
T PRK00312        136 ------WK---GWPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP  174 (212)
T ss_pred             ------cc---CCCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence                  11   1112 37999996655555577888999997 998754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.86  E-value=0.05  Score=50.57  Aligned_cols=81  Identities=15%  Similarity=0.177  Sum_probs=50.3

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|++   ++|.+.++.+...|+ +|+.++++++..+.+    +++|....+..+-....++...+.+...  +
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            47899999984   899999999989999 899888765432222    3345433222222111233333333322  4


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|+++++.|.
T Consensus        85 ~iD~lVnnAG~   95 (271)
T PRK06505         85 KLDFVVHAIGF   95 (271)
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.85  E-value=0.079  Score=49.70  Aligned_cols=44  Identities=23%  Similarity=0.203  Sum_probs=38.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      ..+++|+|+|+|+.+.+++..+...|+++|+++.|+.+|.+.+.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            34789999999999999999888899989999999998877664

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.85  E-value=0.074  Score=48.05  Aligned_cols=96  Identities=18%  Similarity=0.187  Sum_probs=64.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      -+|.+||=+|+|+ |++...+|+ +|+ .|.++|.+++..+.++.-...  --+++..    ...+++... ++.||+|+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~  129 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT  129 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence            5889999999976 666666665 567 999999999999888742211  1144554    223333322 14899998


Q ss_pred             E-----CCCCHH-HHHHHHHHhccCCceEEEEc
Q 017335          279 E-----CIGLTS-VMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       279 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .     -+..+. .+..+.++++|+ |.+++.-
T Consensus       130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST  161 (243)
T COG2227         130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLST  161 (243)
T ss_pred             EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence            5     344433 567899999997 9877653

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.058  Score=48.87  Aligned_cols=81  Identities=20%  Similarity=0.257  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-EEcCCCCCCccHHHHHHHhc--CCCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMT--DGGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~~d~  276 (373)
                      ++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .+..+-....+....+....  .+++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999998 9999999999999999 899999987765544 3455432 22222101122222222221  137899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|.+.|.
T Consensus        84 vi~~ag~   90 (249)
T PRK06500         84 VFINAGV   90 (249)
T ss_pred             EEECCCC
Confidence            9998773

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.07  Score=48.98  Aligned_cols=83  Identities=22%  Similarity=0.298  Sum_probs=50.5

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHC-CCCeEEEEcCChhH-HHH----HHHcCC--ceEEcCCCCCCccHHHHHHHhc
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEK-FEI----GKKFGI--TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~-G~~~Vi~~~~~~~~-~~~----~~~lga--~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      +..+.+|||+|+ |++|...++-+... |+ +|+++++++++ .+.    +++.+.  -+++..+-....++.+.+++..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            456789999998 99999988776666 57 99999988765 332    233332  1233222211233333333332


Q ss_pred             C-CCccEEEECCCC
Q 017335          271 D-GGADYCFECIGL  283 (373)
Q Consensus       271 ~-~~~d~vid~~g~  283 (373)
                      . +++|+++.+.|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence            2 479999987764

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.064  Score=47.97  Aligned_cols=77  Identities=16%  Similarity=0.219  Sum_probs=52.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      ++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+  ..++...+.+..++++|+++.+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence            47899988 9999998888878899 8999999988877776665432 223222  12232222233223799999887


Q ss_pred             CC
Q 017335          282 GL  283 (373)
Q Consensus       282 g~  283 (373)
                      |.
T Consensus        79 g~   80 (222)
T PRK06953         79 GV   80 (222)
T ss_pred             Cc
Confidence            64

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.059  Score=49.19  Aligned_cols=81  Identities=17%  Similarity=0.172  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.    +.+.+. ++..+-....+..+.+.+...  +.
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            3679999998 8999999998888999 8999999887765542    234222 222221111223333333222  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.|.
T Consensus        84 id~li~~ag~   93 (254)
T PRK07478         84 LDIAFNNAGT   93 (254)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.058  Score=49.55  Aligned_cols=81  Identities=21%  Similarity=0.327  Sum_probs=53.3

Q ss_pred             CCCCCEEEEECC-C-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCceE--E--cCCCCCCccHHHHHHH
Q 017335          200 VEVGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITDF--I--NPATCGDKTVSQVIKE  268 (373)
Q Consensus       200 ~~~~~~VlI~G~-G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~~v--i--~~~~~~~~~~~~~i~~  268 (373)
                      +..++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+     +|...+  +  |-.+  +.++.+.+.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~   90 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA   90 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence            345789999997 6 799999999999999 89999988876654432     343222  2  2222  1223333332


Q ss_pred             hc--CCCccEEEECCCC
Q 017335          269 MT--DGGADYCFECIGL  283 (373)
Q Consensus       269 ~~--~~~~d~vid~~g~  283 (373)
                      ..  .+.+|++|.+.|.
T Consensus        91 ~~~~~g~id~li~~ag~  107 (262)
T PRK07831         91 AVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  1378999999884

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.79  E-value=0.12  Score=47.50  Aligned_cols=97  Identities=18%  Similarity=0.153  Sum_probs=68.9

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC-
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      ++......++++||-+|+|. |..+..+++.. +. +|++++.++...+.+++.+.+ ++..      +.    .++.. 
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~-~~~~------d~----~~~~~~   87 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVD-ARTG------DV----RDWKPK   87 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCc-EEEc------Ch----hhCCCC
Confidence            45556678899999999977 77777787775 55 899999999988888775543 3222      22    12222 


Q ss_pred             CCccEEEECCC-----C-HHHHHHHHHHhccCCceEEEE
Q 017335          272 GGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.||+|+....     . ...+..+.+.|++| |+++..
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            37999996432     2 34577889999997 998765

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.14  Score=47.26  Aligned_cols=76  Identities=16%  Similarity=0.231  Sum_probs=48.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce----EEcCCCCCCccHHHHHHHhc--CCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD----FINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~----vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      +++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+    +..+...    ..|-.+  ..++.+.+.+..  .++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence            6899998 9999999998888999 899999887665443    2234321    123332  122222222221  136


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.054  Score=49.78  Aligned_cols=79  Identities=18%  Similarity=0.214  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCc-eEE--cCCCCCCccHHHHHHHhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFI--NPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi--~~~~~~~~~~~~~i~~~~~  271 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ +     +.. +.+  |-.+  .+++.+.+.+...
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            4789999998 8999999999999999 89999998876654422 1     111 122  2222  1233333333222


Q ss_pred             --CCccEEEECCCC
Q 017335          272 --GGADYCFECIGL  283 (373)
Q Consensus       272 --~~~d~vid~~g~  283 (373)
                        +.+|+++++.|.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence              379999999873

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.076  Score=48.00  Aligned_cols=82  Identities=16%  Similarity=0.147  Sum_probs=52.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      ...+++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+    .+.. .++..+-...+++...+.....  +
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            34678999998 9999999999988999 99999998876655432    2321 2232222111333333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.73  E-value=0.097  Score=41.14  Aligned_cols=89  Identities=21%  Similarity=0.236  Sum_probs=59.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+.+|||+|+|.+|..-++.+...|+ +|.+++...   +..+  +.-... .     ..+    .+. -.++|+|+-++
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~----~~~-l~~~~lV~~at   68 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REF----EED-LDGADLVFAAT   68 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-----GGG-CTTESEEEE-S
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhH----HHH-HhhheEEEecC
Confidence            47899999999999999999999999 999999775   2222  211111 1     122    111 12799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      +.+..-..+.+..+.. |..+.....+
T Consensus        69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p   94 (103)
T PF13241_consen   69 DDPELNEAIYADARAR-GILVNVVDDP   94 (103)
T ss_dssp             S-HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred             CCHHHHHHHHHHHhhC-CEEEEECCCc
Confidence            9988566677777765 8888886543

>PRK04266 fibrillarin; Provisional

Probab=95.73  E-value=0.24  Score=44.85  Aligned_cols=102  Identities=14%  Similarity=0.146  Sum_probs=63.9

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      +...++++++||=+|+|. |..+..+++..+..+|++++.+++..+.+.+    ...-..+..+.   .+. .....+ .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence            457899999999999865 5566677777653389999999977664432    21112332222   110 000111 1


Q ss_pred             CCccEEEECCCCH----HHHHHHHHHhccCCceEEEE
Q 017335          272 GGADYCFECIGLT----SVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~~~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.+|+|+-....+    ..+..+.+.|++| |+++..
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            3699999544432    2367888899997 998875

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.72  E-value=0.15  Score=46.92  Aligned_cols=104  Identities=17%  Similarity=0.257  Sum_probs=61.4

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHH-HHc-CCc-eEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKF-GIT-DFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~l-ga~-~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .+++++|+|+   +++|.+.++.+...|+ +|+.+.++.   ++.+.+ +++ +.. ..+..+-...+++.+.+.+... 
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            4789999997   4899998888888999 888886543   333333 233 211 1221121112333333333322 


Q ss_pred             -CCccEEEECCCCH-------H----------------------HHHHHHHHhccCCceEEEEccc
Q 017335          272 -GGADYCFECIGLT-------S----------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       272 -~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                       +.+|+++++.|..       .                      ....+++.++++ |+++.++..
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~  149 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYL  149 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEccc
Confidence             4799999887621       0                      122345566776 999988754

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.72  E-value=0.11  Score=44.15  Aligned_cols=82  Identities=18%  Similarity=0.157  Sum_probs=53.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|+|+|+|.+|..-++.+...|+ +|.+++  ++..+.+++++... +..+.     +.+    ..-.++|+|+-++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~----~dl~~a~lViaaT   78 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSN----DDIKDAHLIYAAT   78 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cCh----hcCCCceEEEECC
Confidence            57899999999999998888888999 888774  33333344454222 22222     111    0012799999999


Q ss_pred             CCHHHHHHHHHHhccC
Q 017335          282 GLTSVMNDAFNSSREG  297 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~  297 (373)
                      +... .+..+...+..
T Consensus        79 ~d~e-~N~~i~~~a~~   93 (157)
T PRK06719         79 NQHA-VNMMVKQAAHD   93 (157)
T ss_pred             CCHH-HHHHHHHHHHH
Confidence            9888 66666655543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.72  E-value=0.022  Score=56.95  Aligned_cols=93  Identities=14%  Similarity=0.104  Sum_probs=64.5

Q ss_pred             HhCCCCCCEEE----EECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhc
Q 017335          197 VAGVEVGSTVA----IFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       197 ~~~~~~~~~Vl----I~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ..++++|+++|    |+|+ |++|.+++++++..|+ +|+++.+.+.+....+..+.+ .+++...   ..+.+.+....
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~~  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKALY  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHHH
Confidence            34667888887    7766 9999999999999999 999988766644443333433 4565554   33444443331


Q ss_pred             CCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          271 DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       271 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                                    ..+...++.|.++ |+++.++...
T Consensus       104 --------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        104 --------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence                          2366778888897 9999998643

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.71  E-value=0.098  Score=47.53  Aligned_cols=98  Identities=17%  Similarity=0.227  Sum_probs=59.6

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------HHH----HHHHcCCceEEcCCCCCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KFE----IGKKFGITDFINPATCGD  259 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~~----~~~~lga~~vi~~~~~~~  259 (373)
                      +.+|+|+|.|++|..++..+-..|..+++.+|.+.-                   |.+    .++++..+.-+....   
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~---   87 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE---   87 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence            468999999999999999999999999999986542                   111    112222211111111   


Q ss_pred             ccHH-HHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCc-eEEEE
Q 017335          260 KTVS-QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVIL  304 (373)
Q Consensus       260 ~~~~-~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~  304 (373)
                      ..+. +.+.++...++|+|+||+.....-..+.+.+... + .++..
T Consensus        88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~-~ip~I~s  133 (231)
T cd00755          88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKR-KIPVISS  133 (231)
T ss_pred             eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHh-CCCEEEE
Confidence            1111 1233333347999999999877555566666554 4 34443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.066  Score=49.51  Aligned_cols=80  Identities=20%  Similarity=0.296  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---C--C-ceEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G--I-TDFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l---g--a-~~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      ++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+... ++   +  . -.++..+-..+.++.+.+.+...  
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3689999998 9999999999999999 8999998876654432 21   1  1 12222221111333333333322  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|.+.|
T Consensus        85 ~~~d~li~~ag   95 (276)
T PRK05875         85 GRLHGVVHCAG   95 (276)
T ss_pred             CCCCEEEECCC
Confidence            37899999887

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.70  E-value=0.2  Score=42.82  Aligned_cols=44  Identities=27%  Similarity=0.338  Sum_probs=37.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      .+|.++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~   45 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGA   45 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTE
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhh
Confidence            368899999999999998889999 99999999999988887774

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.071  Score=49.17  Aligned_cols=80  Identities=16%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+..    .+.+.. +++..+-....++.+.+.+...  ++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999998889999 899999887665433    222322 2222222112333333443322  36


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|.+.|
T Consensus        87 iD~vi~~ag   95 (264)
T PRK07576         87 IDVLVSGAA   95 (264)
T ss_pred             CCEEEECCC
Confidence            899998775

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.68  E-value=0.064  Score=52.60  Aligned_cols=91  Identities=23%  Similarity=0.244  Sum_probs=57.7

Q ss_pred             EEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHH--cC--Cc-eEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          206 VAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK--FG--IT-DFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~--lg--a~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      |+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+  .+  .. ..+|..+     . +.+.++.. +.|+|++
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~-~~l~~~~~-~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----P-ESLAELLR-GCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----H-HHHHHHHT-TSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----H-HHHHHHHh-cCCEEEE
Confidence            78999999999999998877643 89999999999777653  22  11 2233322     2 22444433 5699999


Q ss_pred             CCCCHHHHHHHHHHhccCCceEEEE
Q 017335          280 CIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      |+|.......+-.++..+ -.+++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g-~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAG-VHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred             CCccchhHHHHHHHHHhC-CCeecc
Confidence            999765455555566665 677763

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.68  E-value=0.066  Score=49.24  Aligned_cols=103  Identities=15%  Similarity=0.206  Sum_probs=62.9

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHH---HHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKF---EIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~---~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|++   ++|.+.++.+...|+ +|+.++++++..   +.+ ++++...++..+-...+++.+.+.+...  +
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            47899999973   899999988888999 898888875432   222 2344323332222112333333333322  4


Q ss_pred             CccEEEECCCCH--------------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLT--------------S---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+|+++++.|..              .               ....++..++.+ |+++.++.
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss  149 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSY  149 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEec
Confidence            789999887631              0               123456667776 88888765

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.65  E-value=0.083  Score=50.90  Aligned_cols=36  Identities=31%  Similarity=0.251  Sum_probs=32.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .+.+|+|+|+|++|..++..+..+|..++..+|.+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            357899999999999999999999998999898864

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.64  E-value=0.14  Score=48.57  Aligned_cols=94  Identities=10%  Similarity=0.100  Sum_probs=61.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|+|+|+ |.+|...+..+...|. +|.+++++.++...+...+.+.+. .+- .+.+   .+.+... ++|+||.+.+.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl-~d~~---~l~~al~-g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL-SLPE---TLPPSFK-GVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC-CCHH---HHHHHHC-CCCEEEECCCC
Confidence            6999998 9999999999988999 899999987766655555654332 221 1121   2222222 68999998653


Q ss_pred             HH------------HHHHHHHHhccCCc--eEEEEcc
Q 017335          284 TS------------VMNDAFNSSREGWG--KTVILGV  306 (373)
Q Consensus       284 ~~------------~~~~~~~~l~~~~G--~~v~~G~  306 (373)
                      ..            ....++++++.. |  +++.++.
T Consensus        75 ~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss  110 (317)
T CHL00194         75 RPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSI  110 (317)
T ss_pred             CCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecc
Confidence            11            123455666554 4  7887765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.63  E-value=0.073  Score=48.60  Aligned_cols=79  Identities=22%  Similarity=0.332  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEE--cCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi--~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .+++|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.    ..|.. ..+  |-.+  .+++.+.+.+..  .
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4789999998 9999999998888899 8999999877654432    22322 122  2222  123333333322  1


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +.+|++|.+.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            378999998874

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.63  E-value=0.061  Score=51.38  Aligned_cols=79  Identities=19%  Similarity=0.208  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCce----EEcCCCCCCccHHHHHHHhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITD----FINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~~----vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+ +    +...    ..|-.+ ...+..+.+.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence            4889999998 8999998888888899 89999999988765432 1    1111    222221 11233444554444


Q ss_pred             C-CccEEEECCC
Q 017335          272 G-GADYCFECIG  282 (373)
Q Consensus       272 ~-~~d~vid~~g  282 (373)
                      + .+|+++++.|
T Consensus       130 ~~didilVnnAG  141 (320)
T PLN02780        130 GLDVGVLINNVG  141 (320)
T ss_pred             CCCccEEEEecC
Confidence            4 6779998876

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.071  Score=48.59  Aligned_cols=75  Identities=13%  Similarity=0.061  Sum_probs=49.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      +.++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.++.    .+.. .++..+-   .+. +.+.....+++|+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~-~~~~~~~~~~id~   76 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL---TDA-IDRAQAAEWDVDV   76 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC---CCH-HHHHHHhcCCCCE
Confidence            468999998 9999999999999999 99999988776555432    2321 1221111   111 2233333348999


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      +|.+.|
T Consensus        77 vi~~ag   82 (257)
T PRK09291         77 LLNNAG   82 (257)
T ss_pred             EEECCC
Confidence            999877

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.63  E-value=0.1  Score=48.09  Aligned_cols=93  Identities=22%  Similarity=0.246  Sum_probs=62.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhcCCC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++    .|..   .++..      +.. .+....++.
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~-~l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQ-DIAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHH-HHhhhcCCC
Confidence            4567999999877 7778888775 77 99999999998887764    2321   22222      121 122223347


Q ss_pred             ccEEEECCC------CHHHHHHHHHHhccCCceEEEE
Q 017335          274 ADYCFECIG------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       274 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +|+|+....      ....+..+.+.|++| |+++.+
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~  148 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM  148 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            999995321      233578899999997 998765

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.62  E-value=0.076  Score=48.72  Aligned_cols=78  Identities=19%  Similarity=0.250  Sum_probs=50.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      ++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+..+.+..+-...+++.+.+.+...  +++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899998 8999999998888999 8999999887654442    223222332222111333333333322  379999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      |++.|.
T Consensus        81 i~naG~   86 (259)
T PRK08340         81 VWNAGN   86 (259)
T ss_pred             EECCCC
Confidence            998774

>PRK05717 oxidoreductase; Validated

Probab=95.61  E-value=0.077  Score=48.51  Aligned_cols=81  Identities=19%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .+.++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ +.++.. +.+..+-....++.+.+.+...  +.+|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999998 9999999999888999 899998876654443 344422 1222221011223333333322  36899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|.+.|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9988774

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.093  Score=48.20  Aligned_cols=81  Identities=21%  Similarity=0.272  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c--CC-ceEEcCCCCCCccHHHHHHHhc-CCCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GI-TDFINPATCGDKTVSQVIKEMT-DGGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l--ga-~~vi~~~~~~~~~~~~~i~~~~-~~~~d  275 (373)
                      ++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ +  +. .+.+..+-....++........ .+.+|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4678999998 9999999998888999 89999999877665543 2  21 1222222101122222222111 24789


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++.+.|.
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            99998774

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.59  E-value=0.11  Score=48.37  Aligned_cols=93  Identities=16%  Similarity=0.083  Sum_probs=61.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ...+++++|+|+|++|.+.+..+...|+ +|+++++++++.+.+. .+.   ....+.        +.    +.....+|
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~--------~~----~~~~~~~D  180 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS--------MD----ELPLHRVD  180 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec--------hh----hhcccCcc
Confidence            3457899999999999999988888898 9999999987765543 332   211211        11    11113689


Q ss_pred             EEEECCCCHHH--H---HHHHHHhccCCceEEEEcc
Q 017335          276 YCFECIGLTSV--M---NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g~~~~--~---~~~~~~l~~~~G~~v~~G~  306 (373)
                      +||+|++....  .   ......++++ ..++++..
T Consensus       181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y  215 (270)
T TIGR00507       181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY  215 (270)
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            99999986420  1   1123557786 78888855

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.58  E-value=0.2  Score=45.63  Aligned_cols=107  Identities=15%  Similarity=0.206  Sum_probs=68.6

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....+..+.++||-+|.|. |..++.+++.++ ..+|+.++.+++..+.+++    .|...-+....   .+..+.+.++
T Consensus        61 ~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l  136 (234)
T PLN02781         61 SMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQL  136 (234)
T ss_pred             HHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHH
Confidence            3445666788999999855 666677777654 3499999999988777753    45322111111   2344444443


Q ss_pred             c----CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 T----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~----~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .    .+.||+||--...   ...++.+++.+++| |.++.-..
T Consensus       137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn~  179 (234)
T PLN02781        137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDNT  179 (234)
T ss_pred             HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEcC
Confidence            2    2379999944332   33577889999997 98876544

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.075  Score=48.67  Aligned_cols=81  Identities=16%  Similarity=0.231  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +     +.. .++..+-....++...+.+...  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999998 8999999999989999 89999998876654432 2     211 1222221111233333333222  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +.+|++|.+.|.
T Consensus        85 g~id~li~~ag~   96 (260)
T PRK07063         85 GPLDVLVNNAGI   96 (260)
T ss_pred             CCCcEEEECCCc
Confidence            379999998873

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.087  Score=48.24  Aligned_cols=79  Identities=14%  Similarity=0.103  Sum_probs=50.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC---ceEEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI---TDFINPATCGDKTVSQVIKEMTD--GGAD  275 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga---~~vi~~~~~~~~~~~~~i~~~~~--~~~d  275 (373)
                      +.+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ +..   -+.+.-+-....++.+.+.+...  +.+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            468999998 9999999988888899 99999998887665533 221   11222222111233333333322  2689


Q ss_pred             EEEECCC
Q 017335          276 YCFECIG  282 (373)
Q Consensus       276 ~vid~~g  282 (373)
                      +++.+.|
T Consensus        81 ~lv~~ag   87 (257)
T PRK07024         81 VVIANAG   87 (257)
T ss_pred             EEEECCC
Confidence            9999877

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.55  E-value=0.13  Score=46.56  Aligned_cols=102  Identities=14%  Similarity=0.149  Sum_probs=61.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh------HHHHHH--HcC---------------Cc-eEEcCCCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE------KFEIGK--KFG---------------IT-DFINPATC  257 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~------~~~~~~--~lg---------------a~-~vi~~~~~  257 (373)
                      ...+|+|+|.|++|.+++..+-..|+.++..+|.+.-      ++-.+.  ..|               .. +|--.+. 
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~-  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND-  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence            4688999999999999999999999999988886442      111111  112               11 1111111 


Q ss_pred             CCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       258 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                        .=..+.+.++...++|+|+||+..-..=-.++..+.++.=.++..+.
T Consensus       108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~G  154 (263)
T COG1179         108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMG  154 (263)
T ss_pred             --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecc
Confidence              00113344555568999999999765433444444443145666654

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.088  Score=47.75  Aligned_cols=81  Identities=23%  Similarity=0.267  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+    .+.. +.+..+-....++...+.+...  ++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999998888999 99999998766544322    2221 2222222111222222222211  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (250)
T PRK07774         84 IDYLVNNAAI   93 (250)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.085  Score=48.12  Aligned_cols=81  Identities=14%  Similarity=0.148  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+    .+.. +.+..+-...+++...+.+...  +.
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999998 8999999998889999 99999998876555432    2321 1222222112333333333322  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            8999988763

>PRK08643 acetoin reductase; Validated

Probab=95.52  E-value=0.082  Score=48.26  Aligned_cols=80  Identities=18%  Similarity=0.250  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-EEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      ++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .+... .+..+-..++.+.+.+.+...  +++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999998 9999999999989999 99999988776544422    23221 222221111223333333221  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |++|.+.|.
T Consensus        81 d~vi~~ag~   89 (256)
T PRK08643         81 NVVVNNAGV   89 (256)
T ss_pred             CEEEECCCC
Confidence            999998864

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.52  E-value=0.17  Score=47.05  Aligned_cols=102  Identities=17%  Similarity=0.157  Sum_probs=61.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------HH----HHHHHcCCc-eEEcCCCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KF----EIGKKFGIT-DFINPATC  257 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~----~~~~~lga~-~vi~~~~~  257 (373)
                      .+.+|+|+|.|++|..++..+-..|..++..+|.+.-                   |.    +.+.++..+ +|......
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            5678999999999999999999999889999886521                   11    111222221 12111110


Q ss_pred             CCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       258 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..   .+.+.++...++|+||||+.....-..+.+.+...+=.++..|.
T Consensus       109 i~---~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG  154 (268)
T PRK15116        109 IT---PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG  154 (268)
T ss_pred             cC---hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence            00   11223333347999999999865444555555553134555554

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.52  E-value=0.081  Score=48.71  Aligned_cols=80  Identities=16%  Similarity=0.204  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ +  ++|.+.++.+...|+ +|+.++++++..+.++    +.|....+..+-...++..+.+.+...  +
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5788999998 4  799999888888999 8888887643222222    235333222221112333333333322  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      .+|+++++.|
T Consensus        86 ~iDilVnnag   95 (260)
T PRK06603         86 SFDFLLHGMA   95 (260)
T ss_pred             CccEEEEccc
Confidence            7999998876

>PLN02244 tocopherol O-methyltransferase

Probab=95.51  E-value=0.043  Score=52.96  Aligned_cols=94  Identities=17%  Similarity=0.247  Sum_probs=63.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhcCCC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      +++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++..+.   .++     ...++.
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~  186 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ  186 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence            7889999999876 6677788887788 99999999987766654    2321   1222211   110     122347


Q ss_pred             ccEEEECCCC------HHHHHHHHHHhccCCceEEEEc
Q 017335          274 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       274 ~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ||+|+..-..      ...+..+.+.|++| |++++..
T Consensus       187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~  223 (340)
T PLN02244        187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT  223 (340)
T ss_pred             ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            9999864321      33578899999997 9998764

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.061  Score=48.61  Aligned_cols=81  Identities=22%  Similarity=0.248  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC-c-e--EEcCCCCCC---ccHHHHHHHh
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-T-D--FINPATCGD---KTVSQVIKEM  269 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga-~-~--vi~~~~~~~---~~~~~~i~~~  269 (373)
                      ++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+. + .  .+|-.+...   ..+.+.+.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4679999998 9999999988888999 8999999987665442    2221 1 1  122111001   1233344443


Q ss_pred             cCCCccEEEECCCC
Q 017335          270 TDGGADYCFECIGL  283 (373)
Q Consensus       270 ~~~~~d~vid~~g~  283 (373)
                      ..+.+|++|.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33478999998883

>PRK07574 formate dehydrogenase; Provisional

Probab=95.50  E-value=0.13  Score=50.41  Aligned_cols=45  Identities=31%  Similarity=0.380  Sum_probs=36.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      .|.+|.|+|.|.+|+..++.++.+|. +|++.+++....+..+.+|
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g  235 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG  235 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence            46799999999999999999999999 9999998764333333444

>PRK06484 short chain dehydrogenase; Validated

Probab=95.50  E-value=0.25  Score=50.28  Aligned_cols=79  Identities=15%  Similarity=0.257  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---EEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD---FINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~---vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++...   .+|-.+  .+++.+.+.+...  +++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            5789999998 8999999999999999 999999988876554 4455322   223222  2333333333322  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++++.|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999998764

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.50  E-value=0.076  Score=53.52  Aligned_cols=78  Identities=24%  Similarity=0.361  Sum_probs=55.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh---------------------hHHHHHHHcCCceEEcCCCCCCc
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---------------------EKFEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~---------------------~~~~~~~~lga~~vi~~~~~~~~  260 (373)
                      .+++|+|+|+|+.|+.++..++..|. .|++++..+                     ...+.++++|.+..++....  .
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~  216 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R  216 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence            57899999999999999999999999 788887654                     24566778898766554320  1


Q ss_pred             cHHHHHHHhcCCCccEEEECCCCHH
Q 017335          261 TVSQVIKEMTDGGADYCFECIGLTS  285 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid~~g~~~  285 (373)
                      ++  .+.+.. .++|.||.++|...
T Consensus       217 ~~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       217 DI--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             cc--CHHHHH-hcCCEEEEEeCCCC
Confidence            11  111221 26999999999743

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.088  Score=47.78  Aligned_cols=81  Identities=17%  Similarity=0.169  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c--CCc-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l--ga~-~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+.++.++.....+ +  +.. +++..+-....++.+.+.+...  +++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999998 9999999988888898 89999988776544322 2  321 2222222111233333333322  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++.+.|.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999998884

>PLN02476 O-methyltransferase

Probab=95.48  E-value=0.17  Score=47.19  Aligned_cols=111  Identities=15%  Similarity=0.176  Sum_probs=71.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~  268 (373)
                      +....+....++||=+|.+. |..++.+|+.++. .+|+.++.+++..+.++    +.|..+-+.-..   .+..+.+.+
T Consensus       110 L~~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~  185 (278)
T PLN02476        110 LAMLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKS  185 (278)
T ss_pred             HHHHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHH
Confidence            34455667789999999854 6677777877642 27999999998877774    456532222222   334444444


Q ss_pred             hc----CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcccCC
Q 017335          269 MT----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       269 ~~----~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      +.    .+.||.||--...   ...++.+++.|++| |.++.=.....
T Consensus       186 l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNvL~~  232 (278)
T PLN02476        186 MIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNVLWH  232 (278)
T ss_pred             HHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecCccC
Confidence            31    2379999944443   33578889999997 99876554433

>PLN03139 formate dehydrogenase; Provisional

Probab=95.47  E-value=0.1  Score=51.08  Aligned_cols=46  Identities=22%  Similarity=0.248  Sum_probs=37.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~  243 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA  243 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence            57899999999999999999999999 99999987544444444443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.46  E-value=0.11  Score=47.31  Aligned_cols=81  Identities=19%  Similarity=0.203  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+    ++.+... .+..+-.....+.+.+.+..  .++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999999999999 899999988655433    2344432 22222101122222222221  136


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        85 ~d~vi~~ag~   94 (262)
T PRK13394         85 VDILVSNAGI   94 (262)
T ss_pred             CCEEEECCcc
Confidence            8999998874

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.46  E-value=0.088  Score=48.83  Aligned_cols=102  Identities=18%  Similarity=0.198  Sum_probs=68.1

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--c--eEEcCCCCCCccHHHHHHHh
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--T--DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~--~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.....++++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++...  .  .++..      ++.+  ...
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~------D~~~--~~~  113 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN------DILK--KDF  113 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC------Cccc--CCC
Confidence            55667889999999999875 5566677777787 99999999988888765321  1  11111      1110  011


Q ss_pred             cCCCccEEEEC--C---C---CHHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCFEC--I---G---LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vid~--~---g---~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .++.||+|+..  .   +   ....+..+.+.|++| |+++....
T Consensus       114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~  157 (263)
T PTZ00098        114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY  157 (263)
T ss_pred             CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            22379999952  1   1   233677888999997 99987654

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.095  Score=47.91  Aligned_cols=80  Identities=21%  Similarity=0.224  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCce-E--EcCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITD-F--INPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~----~~~lga~~-v--i~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .+++++|+|+ |++|...++.+...|++.|++++++.++...    +++.+... .  .|-.+  ..++.+.+....  .
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF   82 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5688999998 8999999999999999349999988765542    23344322 1  22222  122322222221  1


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|++|.+.|.
T Consensus        83 g~id~li~~ag~   94 (260)
T PRK06198         83 GRLDALVNAAGL   94 (260)
T ss_pred             CCCCEEEECCCc
Confidence            379999999874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.46  E-value=0.37  Score=38.23  Aligned_cols=92  Identities=18%  Similarity=0.174  Sum_probs=61.5

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS  285 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~  285 (373)
                      |+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+. .+.+   .+++..-..++.++-+++...
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~-~~~~---~l~~a~i~~a~~vv~~~~~d~   74 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA-TDPE---VLERAGIEKADAVVILTDDDE   74 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T-TSHH---HHHHTTGGCESEEEEESSSHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc-hhhh---HHhhcCccccCEEEEccCCHH
Confidence            6788999999999999999776 999999999999999988854 555544 1222   233332237899998887655


Q ss_pred             HHH---HHHHHhccCCceEEEE
Q 017335          286 VMN---DAFNSSREGWGKTVIL  304 (373)
Q Consensus       286 ~~~---~~~~~l~~~~G~~v~~  304 (373)
                      .-.   ...+.+.+. .+++..
T Consensus        75 ~n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   75 ENLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHHCCC-CeEEEE
Confidence            222   233334453 555544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.46  E-value=0.15  Score=42.41  Aligned_cols=32  Identities=28%  Similarity=0.434  Sum_probs=29.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      +|+|+|+|++|...+..+...|.+++..+|.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48999999999999999999999889999865

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.45  E-value=0.095  Score=47.49  Aligned_cols=80  Identities=20%  Similarity=0.172  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      ++.++||+|+ |.+|...+..+...|+ +|+.++++.++...+.+    .+. .+++..+-....++.+.+.+...  ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999999988999 89999988776554432    232 22333222111223333333222  36


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|.+.|
T Consensus        81 ~d~vi~~ag   89 (250)
T TIGR03206        81 VDVLVNNAG   89 (250)
T ss_pred             CCEEEECCC
Confidence            899999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.098  Score=47.96  Aligned_cols=80  Identities=19%  Similarity=0.247  Sum_probs=50.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      +.+|||+|+ |++|..+++.+...|+ +|+++++++++.+.+.    ..+.. +++..+-....++...+.+...  +++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            357999998 9999999999989999 9999999876654432    23432 1222221111233333333322  368


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |++|.+.|.
T Consensus        80 d~vi~~ag~   88 (263)
T PRK06181         80 DILVNNAGI   88 (263)
T ss_pred             CEEEECCCc
Confidence            999998763

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.092  Score=47.84  Aligned_cols=81  Identities=22%  Similarity=0.283  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .+++++|+|+ |++|...+..+...|+ +|+.+++++++.+.+    ++.+.. +.+..+-....++...+.+..  .++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999998 8999999988888899 899999987764433    233422 222222211122222222221  137


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.|.
T Consensus        85 id~li~~ag~   94 (253)
T PRK06172         85 LDYAFNNAGI   94 (253)
T ss_pred             CCEEEECCCC
Confidence            8999998774

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.13  Score=47.05  Aligned_cols=79  Identities=20%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +    +.. +.+..+-....++.+.+...  +.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence            4789999998 8999999988888999 99999998876655332 1    321 22222221112232222221  479


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++.+.|.
T Consensus        83 d~lv~~ag~   91 (259)
T PRK06125         83 DILVNNAGA   91 (259)
T ss_pred             CEEEECCCC
Confidence            999998874

>PLN03075 nicotianamine synthase; Provisional

Probab=95.42  E-value=0.11  Score=48.88  Aligned_cols=97  Identities=18%  Similarity=0.178  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcC-C----ceEEcCCCCCCccHHHHHHHhc--CC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFG-I----TDFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lg-a----~~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .+.++|+-+|+|+.++.++.+++.+.. .+++.+|.+++..+.+++.- .    ..-+.-..   .|..    +..  .+
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~----~~~~~l~  194 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVM----DVTESLK  194 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchh----hcccccC
Confidence            378999999999999988888876543 38999999999888887632 1    11111111   1222    122  24


Q ss_pred             CccEEEECC-------CCHHHHHHHHHHhccCCceEEEEc
Q 017335          273 GADYCFECI-------GLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       273 ~~d~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +||+||-.+       .....++.+.+.|++| |.++.-.
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            899999554       2344688999999997 8877543

>PRK07985 oxidoreductase; Provisional

Probab=95.42  E-value=0.21  Score=46.97  Aligned_cols=103  Identities=15%  Similarity=0.121  Sum_probs=61.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+.++.  ++.+.+    ++.|.. +.+..+-...+++.+.+.+...  
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5679999998 8999999999989999 888876542  233222    223422 1222222111333333333322  


Q ss_pred             CCccEEEECCCCH--------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +++|+++.+.|..                          ..+..+++.++.+ |+++.++.
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS  186 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSS  186 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECC
Confidence            3789999887631                          0233455556676 89998875

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.18  Score=46.83  Aligned_cols=101  Identities=19%  Similarity=0.285  Sum_probs=60.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc-CCCccE
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT-DGGADY  276 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~-~~~~d~  276 (373)
                      +++++|.|+|++|.+++..+. .|+ +|+.+++++++.+.+.    ..|.+ +++..+-...+++.+.+.+.. .+++|+
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            467899999999999888875 788 9999999877654432    22422 222222111133333333321 137999


Q ss_pred             EEECCCCHH------------------HHHHHHHHhccCCceEEEEcc
Q 017335          277 CFECIGLTS------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       277 vid~~g~~~------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++++.|...                  .++.+.+.++.+ |+++.++.
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS  126 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIAS  126 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEe
Confidence            999887421                  133445556665 77776654

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.095  Score=49.78  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc-----CCc-eEE--cCCCCCCccHHHHHHHhc-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFI--NPATCGDKTVSQVIKEMT-  270 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l-----ga~-~vi--~~~~~~~~~~~~~i~~~~-  270 (373)
                      .+++++|+|+ +++|.+++..+...|+ +|+.+.+++++.+.+. ++     +.. +++  |-.+  ..++.+.+.+.. 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~   89 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA   89 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence            4689999998 8999999988888999 9999999887655432 11     111 222  2222  122222332322 


Q ss_pred             -CCCccEEEECCCC
Q 017335          271 -DGGADYCFECIGL  283 (373)
Q Consensus       271 -~~~~d~vid~~g~  283 (373)
                       .+.+|++|++.|.
T Consensus        90 ~~~~iD~li~nAG~  103 (313)
T PRK05854         90 EGRPIHLLINNAGV  103 (313)
T ss_pred             hCCCccEEEECCcc
Confidence             2378999988763

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.41  E-value=0.21  Score=43.94  Aligned_cols=97  Identities=18%  Similarity=0.183  Sum_probs=58.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCceE-EcCCCCCCccHHHHHHHhcCCCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITDF-INPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~~v-i~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      .+.+++|+|+ |.+|...+..+...|. +|+.+.++.++.+.+.+ +    +.... .+..+  ..++.+.+     .++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~   98 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA   98 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence            5789999997 9999998888888898 99999999887665533 2    22211 11111  01221222     268


Q ss_pred             cEEEECCCCHHHHHHHHH-HhccCCceEEEEccc
Q 017335          275 DYCFECIGLTSVMNDAFN-SSREGWGKTVILGVE  307 (373)
Q Consensus       275 d~vid~~g~~~~~~~~~~-~l~~~~G~~v~~G~~  307 (373)
                      |+||.++........... ..+++ -.++++...
T Consensus        99 diVi~at~~g~~~~~~~~~~~~~~-~vv~D~~~~  131 (194)
T cd01078          99 DVVFAAGAAGVELLEKLAWAPKPL-AVAADVNAV  131 (194)
T ss_pred             CEEEECCCCCceechhhhcccCce-eEEEEccCC
Confidence            999998886552111122 22333 456766654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.40  E-value=0.1  Score=47.72  Aligned_cols=81  Identities=21%  Similarity=0.325  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.    ..+.. +.+..+-....++.+.+.+...  ++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999998 9999999998888999 8999999887765543    22322 1222222112333333333222  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        90 id~vi~~ag~   99 (259)
T PRK08213         90 VDILVNNAGA   99 (259)
T ss_pred             CCEEEECCCC
Confidence            8999998774

>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins

Probab=95.40  E-value=0.17  Score=44.24  Aligned_cols=72  Identities=24%  Similarity=0.335  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      -++||.+||=+|+|- |.+...+.+..++ +.++++.++++.....+-|.. |+.      .++-+.+....++.||+||
T Consensus        10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~sFD~VI   80 (193)
T PF07021_consen   10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQSFDYVI   80 (193)
T ss_pred             HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCCCccEEe
Confidence            478999999999986 7777777778899 999999999998888777765 554      3455567777666999999


Q ss_pred             E
Q 017335          279 E  279 (373)
Q Consensus       279 d  279 (373)
                      -
T Consensus        81 l   81 (193)
T PF07021_consen   81 L   81 (193)
T ss_pred             h
Confidence            3

Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.40  E-value=0.088  Score=48.13  Aligned_cols=79  Identities=16%  Similarity=0.233  Sum_probs=50.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-H----cCC--ceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K----FGI--TDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~----lga--~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      +++|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +    .+.  -+.+..+-..+.++.+.+.+...  +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            568999998 8999999988888899 8999998876554432 1    221  12232222111233333333321  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|+++.+.|
T Consensus        81 ~id~vv~~ag   90 (259)
T PRK12384         81 RVDLLVYNAG   90 (259)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.1  Score=49.25  Aligned_cols=80  Identities=14%  Similarity=0.152  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc-----CCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l-----ga~-~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .+.+|||+|+ |++|..+++.+...|+ +|+.+.++.++.+.+. ++     +.. +++..+-....++.+.+.+...  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            5689999998 9999999998888899 8999998877654331 11     111 1222222111233333333322  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|.+.|
T Consensus        94 ~~iD~li~nAg  104 (306)
T PRK06197         94 PRIDLLINNAG  104 (306)
T ss_pred             CCCCEEEECCc
Confidence            36999999887

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.39  E-value=0.091  Score=55.16  Aligned_cols=77  Identities=27%  Similarity=0.308  Sum_probs=56.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceEEcCCCCCCc
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~lga~~vi~~~~~~~~  260 (373)
                      .+++|+|+|+|+.|+.++..++..|+ +|+++++.+.                     ..+.++++|.+..++..-..+.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 8999887653                     4566778898766665321112


Q ss_pred             cHHHHHHHhcCCCccEEEECCCCH
Q 017335          261 TVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      .+    .++. .++|.||.++|..
T Consensus       388 ~~----~~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TF----SDLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CH----HHHH-hcCCEEEEeCCCC
Confidence            22    1221 2799999999864

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.1  Score=47.54  Aligned_cols=80  Identities=13%  Similarity=0.128  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+|||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+    .+.. +.+..+-....++.+.+.+...  +.
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999998 8999999999999999 99999998766554432    2321 2222222111223233333222  36


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|+++.+.|
T Consensus        86 id~li~~ag   94 (252)
T PRK07035         86 LDILVNNAA   94 (252)
T ss_pred             CCEEEECCC
Confidence            899998887

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.38  E-value=0.11  Score=50.16  Aligned_cols=36  Identities=33%  Similarity=0.263  Sum_probs=32.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ...+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            357899999999999999999999999999999763

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.37  E-value=0.26  Score=42.98  Aligned_cols=99  Identities=21%  Similarity=0.267  Sum_probs=65.0

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~  268 (373)
                      .....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    .+..  .++..+.      .    .
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~------~----~   92 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA------P----I   92 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc------h----h
Confidence            4455678899999999876 6777777776543399999999987777653    3332  2332211      1    1


Q ss_pred             hcCCCccEEEECCC---CHHHHHHHHHHhccCCceEEEEc
Q 017335          269 MTDGGADYCFECIG---LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       269 ~~~~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...+.+|+|+....   -...+..+.+.|+++ |+++...
T Consensus        93 ~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         93 ELPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             hcCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence            11237999995432   133577889999997 9987653

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.37  E-value=0.12  Score=47.53  Aligned_cols=36  Identities=22%  Similarity=0.339  Sum_probs=31.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ...+|+|+|+|++|..++..+...|.+++..+|.+.
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            457999999999999999999999998998887643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.36  E-value=0.099  Score=48.16  Aligned_cols=81  Identities=19%  Similarity=0.258  Sum_probs=49.0

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+   +++|.+.++.+...|+ +|+.+.+.+...+.+++    .|....+..+-...+++.+.+.+...  +
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5789999994   4899999998888999 88887665433333322    34322222222112333333333322  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            79999998764

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.36  E-value=0.1  Score=47.72  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=31.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +.+|+|+|+|++|..+++.+...|.++++.+|.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            47899999999999999999999999999988754

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.1  Score=48.31  Aligned_cols=79  Identities=16%  Similarity=0.185  Sum_probs=51.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      .++||+|+ |.+|...++.+...|. +|+++.+++++.+.+++ .+.. .++..+-.....+.+.+.+...  +++|++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57999998 9999999988888999 89999999887766654 2321 1222221111223333333221  3789999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      .+.|.
T Consensus        82 ~~ag~   86 (276)
T PRK06482         82 SNAGY   86 (276)
T ss_pred             ECCCC
Confidence            98773

>PRK08589 short chain dehydrogenase; Validated

Probab=95.35  E-value=0.094  Score=48.57  Aligned_cols=79  Identities=23%  Similarity=0.289  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCc-eE--EcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DF--INPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~v--i~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++++..+.+++   .+.. ..  .|-.+  ..++...+.+...  +
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence            4789999998 8999999988888999 99999988433333332   2321 22  22222  1233333333322  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (272)
T PRK08589         82 RVDVLFNNAGV   92 (272)
T ss_pred             CcCEEEECCCC
Confidence            68999998763

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.12  Score=46.86  Aligned_cols=42  Identities=17%  Similarity=0.138  Sum_probs=35.6

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF  246 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l  246 (373)
                      .+++|+|+ |++|...+..+...|+ +|+++++++++.+.+...
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence            57899998 9999998888888899 899999998887766543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.34  E-value=0.1  Score=48.30  Aligned_cols=80  Identities=24%  Similarity=0.238  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+++|+|+ |++|++.+..+...|+ +|+++++++++.+.+.    ..+.. ..+..+-....++...+.+...  +.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 8999999999989999 8999998876654432    22322 2222222111223333333222  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|.+.|
T Consensus        88 id~li~~ag   96 (278)
T PRK08277         88 CDILINGAG   96 (278)
T ss_pred             CCEEEECCC
Confidence            999999877

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.34  E-value=0.096  Score=49.71  Aligned_cols=104  Identities=11%  Similarity=-0.015  Sum_probs=69.5

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHH-HcCCc--eEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~-~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      -....+++|+|+|..|.+.+..+. ..+.++|.+.++++++.+.+. ++...  .+. .     .+..+.+     .++|
T Consensus       122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av-----~~aD  190 (304)
T PRK07340        122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIP-----EAVD  190 (304)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHh-----hcCC
Confidence            345679999999999999888876 467778999999988866653 34311  111 1     1232233     2799


Q ss_pred             EEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH
Q 017335          276 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI  318 (373)
Q Consensus       276 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~  318 (373)
                      +|+.|+++..-+-..  .+++| -.+..+|.+..+ .-+++..
T Consensus       191 iVitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p~-~~El~~~  229 (304)
T PRK07340        191 LVVTATTSRTPVYPE--AARAG-RLVVAVGAFTPD-MAELAPR  229 (304)
T ss_pred             EEEEccCCCCceeCc--cCCCC-CEEEecCCCCCC-cccCCHH
Confidence            999988865523233  37897 899999976543 3356654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.33  E-value=0.13  Score=46.44  Aligned_cols=79  Identities=15%  Similarity=0.104  Sum_probs=50.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      ++++||+|+ |++|...++.+...|+ +|+.+++++++ .+.++..++. .+..+-....++.+.+.+...  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            468999998 8999999998888999 89999887653 3334445542 222222112333333333322  3699999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      .+.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            98773

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.12  Score=46.88  Aligned_cols=79  Identities=20%  Similarity=0.233  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----c--CC-ceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GI-TDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----l--ga-~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+.+..    .  +. -+++..+-...+++.+.+.+...  +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            568999998 9999998888888898 89999998877655432    1  21 12222222112333333333322  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|.+.|
T Consensus        81 ~id~vi~~ag   90 (248)
T PRK08251         81 GLDRVIVNAG   90 (248)
T ss_pred             CCCEEEECCC
Confidence            7999999886

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.33  E-value=0.16  Score=47.86  Aligned_cols=97  Identities=15%  Similarity=0.108  Sum_probs=58.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh---hHHHH-HHHcC---Cc-eE--EcCCCCCCccHHHHHHHhcC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---EKFEI-GKKFG---IT-DF--INPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~---~~~~~-~~~lg---a~-~v--i~~~~~~~~~~~~~i~~~~~  271 (373)
                      .+++++|+|+|++|.+++..+...|+++|+++.++.   ++.+. ++++.   .. .+  .+..+      .+.+.+.. 
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~------~~~~~~~~-  197 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND------TEKLKAEI-  197 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh------hhHHHhhh-
Confidence            578999999999999999888899996799999985   44333 33332   11 11  11111      11222211 


Q ss_pred             CCccEEEECCCCHHH-----HHH-HHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLTSV-----MND-AFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~~~-----~~~-~~~~l~~~~G~~v~~G~  306 (373)
                      ..+|++++|+.....     ... ....+.++ ..++++-.
T Consensus       198 ~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~-~~v~D~vY  237 (289)
T PRK12548        198 ASSDILVNATLVGMKPNDGETNIKDTSVFRKD-LVVADTVY  237 (289)
T ss_pred             ccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCC-CEEEEecC
Confidence            257999998863210     000 13457775 77777744

>PRK06194 hypothetical protein; Provisional

Probab=95.33  E-value=0.11  Score=48.43  Aligned_cols=81  Identities=17%  Similarity=0.239  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---CCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l---ga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+... ++   +.. .++..+-...+++.+.+....  .++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999998 9999999998888999 8999998876654432 22   332 123222211123333233221  236


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.11  Score=48.24  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=50.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      +.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+    .+.   -+++..+-...+++.+ +.+...  +
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            568999998 9999999998888999 89999988776554432    221   1222222211233333 443322  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++.+.|.
T Consensus        81 ~id~vv~~ag~   91 (280)
T PRK06914         81 RIDLLVNNAGY   91 (280)
T ss_pred             CeeEEEECCcc
Confidence            78999998763

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.31  E-value=0.088  Score=48.18  Aligned_cols=78  Identities=21%  Similarity=0.251  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCce-E--EcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-F--INPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~~-v--i~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++...+..++   .+.+. .  .|-.+  ..++.+.+.+...  +
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence            4689999998 9999999999888999 89999987643333332   34321 1  22222  1233333333322  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      .+|+++.+.|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            7999999886

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.31  E-value=0.13  Score=44.86  Aligned_cols=92  Identities=18%  Similarity=0.220  Sum_probs=59.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc--eEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT--DFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ++++||-+|+|. |..++.+++.....+|++++.+++..+.++    +.+.+  .++..+      ..+ +  ...+.+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d------~~~-~--~~~~~fD  111 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR------AED-F--QHEEQFD  111 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc------hhh-c--cccCCcc
Confidence            388999999876 666666666554348999999988666554    34533  233222      211 1  1123899


Q ss_pred             EEEECC-C-CHHHHHHHHHHhccCCceEEEE
Q 017335          276 YCFECI-G-LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       276 ~vid~~-g-~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +|+-.. . -...++.+.+.|+++ |+++..
T Consensus       112 ~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       112 VITSRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             EEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            998432 2 233567788899997 998876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.35  Score=43.58  Aligned_cols=104  Identities=13%  Similarity=0.154  Sum_probs=61.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh-HHHH----HHHcCCc-eEEcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEI----GKKFGIT-DFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~----~~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      ++.++||+|+ |++|...++.+...|+ +|+.+.++.+ +.+.    ++..+.. +.+..+-....++.+.+.+..  .+
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5689999998 9999999999999999 7777665432 2222    2233421 222222211123333333322  13


Q ss_pred             CccEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEccc
Q 017335          273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       273 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      ++|++|.+.|...                         .+..+++.++.+ |+++.++..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  141 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS  141 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence            7899999887410                         123445556675 899888753

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.29  E-value=0.11  Score=42.85  Aligned_cols=97  Identities=23%  Similarity=0.231  Sum_probs=57.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------HHHHH----HHcCC-ceEEcCCCCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KFEIG----KKFGI-TDFINPATCG  258 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~~~~----~~lga-~~vi~~~~~~  258 (373)
                      ..+|+|+|+|++|...+..+-..|+.++..+|.+.-                   |.+.+    +++.. .++.....  
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~--   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE--   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence            468999999999999999999999989999887432                   22222    22221 12211111  


Q ss_pred             CccH-HHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCce-EEEEc
Q 017335          259 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK-TVILG  305 (373)
Q Consensus       259 ~~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~-~v~~G  305 (373)
                        .+ .+.+.++. .++|+||+|+........+.+.++.. +. ++..+
T Consensus        80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~  124 (135)
T PF00899_consen   80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAG  124 (135)
T ss_dssp             --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEE
T ss_pred             --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence              11 12222222 27899999999877555555666664 54 44433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=95.26  E-value=0.32  Score=43.44  Aligned_cols=100  Identities=18%  Similarity=0.181  Sum_probs=63.6

Q ss_pred             HhC-CCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC-CC
Q 017335          197 VAG-VEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD-GG  273 (373)
Q Consensus       197 ~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~-~~  273 (373)
                      ..+ ++++++||=+|+|+ |..+..+++..+. .+|+++|.++..     ...-.++++.+- .+....+.+.+... +.
T Consensus        45 ~~~~~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~-~~~~~~~~i~~~~~~~~  117 (209)
T PRK11188         45 SDKLFKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDF-RDELVLKALLERVGDSK  117 (209)
T ss_pred             HhccCCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CCCCcEEEecCC-CChHHHHHHHHHhCCCC
Confidence            344 68899999999876 6677777777653 389999987621     111123444443 22333444544433 38


Q ss_pred             ccEEEECC-----CC------------HHHHHHHHHHhccCCceEEEE
Q 017335          274 ADYCFECI-----GL------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       274 ~d~vid~~-----g~------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +|+|+...     |.            ...++.+.+.|++| |+++..
T Consensus       118 ~D~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~  164 (209)
T PRK11188        118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK  164 (209)
T ss_pred             CCEEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence            99999533     22            12467888999997 998874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.23  E-value=0.11  Score=47.48  Aligned_cols=80  Identities=14%  Similarity=0.214  Sum_probs=50.1

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .++++||+|++   ++|.+.++.+...|+ +|+.+.++++..+.++++...  +.+.-+-...++..+.+.+...  +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999874   899999988888999 899998875444444444211  1222221112333333333322  479


Q ss_pred             cEEEECCC
Q 017335          275 DYCFECIG  282 (373)
Q Consensus       275 d~vid~~g  282 (373)
                      |+++++.|
T Consensus        85 D~lv~nAg   92 (252)
T PRK06079         85 DGIVHAIA   92 (252)
T ss_pred             CEEEEccc
Confidence            99999877

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.23  E-value=0.16  Score=45.57  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=31.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      ...+|+|+|+|++|...++.+...|..++..+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45689999999999999999999999889999977

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.23  E-value=0.14  Score=46.76  Aligned_cols=81  Identities=25%  Similarity=0.332  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    ..+.. ..+..+-....++.+.+.....  +.
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            4679999998 8999999998888999 9999999877654432    22322 1222222111233333333221  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.|.
T Consensus        87 id~vi~~ag~   96 (254)
T PRK08085         87 IDVLINNAGI   96 (254)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK09242 tropinone reductase; Provisional

Probab=95.23  E-value=0.13  Score=47.03  Aligned_cols=81  Identities=16%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCc-eEEcCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +     +.+ ..+..+-....++...+.+..  -
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 89999998877554432 1     221 122112101123333333322  1


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++.+.|.
T Consensus        87 g~id~li~~ag~   98 (257)
T PRK09242         87 DGLHILVNNAGG   98 (257)
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>PLN02253 xanthoxin dehydrogenase

Probab=95.23  E-value=0.1  Score=48.39  Aligned_cols=81  Identities=20%  Similarity=0.205  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC---ceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI---TDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga---~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. .++.   .+.+..+-...+++.+.+.....  +++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            3679999998 8999999888888899 9999998776554432 3321   12222221111233333333222  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++++.|.
T Consensus        96 d~li~~Ag~  104 (280)
T PLN02253         96 DIMVNNAGL  104 (280)
T ss_pred             CEEEECCCc
Confidence            999998763

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.22  E-value=0.12  Score=49.23  Aligned_cols=78  Identities=21%  Similarity=0.178  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---Cc-eEE--cCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---IT-DFI--NPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~-~vi--~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. ++.   .. .++  |-.+  ..++.+.+.+..  .
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            4678999998 9999999998888898 9999999887765543 232   11 122  2222  122222233321  2


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +.+|++|++.|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            36999999877

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.20  E-value=0.12  Score=49.14  Aligned_cols=36  Identities=19%  Similarity=0.187  Sum_probs=32.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.+
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~  170 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK  170 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            57899999999999999999999999 9999987653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.20  E-value=0.13  Score=46.89  Aligned_cols=80  Identities=21%  Similarity=0.275  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+.    +.+.. +.+..+-..+.++.+.+.....  ++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3579999998 9999999998888899 9999999887655442    22322 2222222112233333333221  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|.+.+
T Consensus        82 ~d~vi~~a~   90 (258)
T PRK12429         82 VDILVNNAG   90 (258)
T ss_pred             CCEEEECCC
Confidence            899998876

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.19  E-value=0.2  Score=46.35  Aligned_cols=102  Identities=17%  Similarity=0.249  Sum_probs=67.4

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc-C------Cc--eEEcCCCCCCccHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF-G------IT--DFINPATCGDKTVSQV  265 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~l-g------a~--~vi~~~~~~~~~~~~~  265 (373)
                      +...++++++||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++- .      ..  .++..+.   .++   
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l---  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL---  139 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence            445678999999999876 6677778877653 2899999999988887532 1      11  1222221   111   


Q ss_pred             HHHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEccc
Q 017335          266 IKEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       266 i~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                        ...++.||+|+-..+      ....+.++.+.|++| |+++..-..
T Consensus       140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~  184 (261)
T PLN02233        140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN  184 (261)
T ss_pred             --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence              112237999985432      234688999999997 999877543

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.18  E-value=0.16  Score=47.45  Aligned_cols=87  Identities=15%  Similarity=0.217  Sum_probs=57.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      +|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|.....   .   .+. +.+     ..+|+||.|+...
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~   68 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG   68 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence            58899999999998888888898 999999999998888877742111   1   111 111     2678888888855


Q ss_pred             HH---HHHHHHHhccCCceEEEEc
Q 017335          285 SV---MNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       285 ~~---~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..   +..+...++++ ..+.+++
T Consensus        69 ~~~~~~~~l~~~l~~~-~ii~d~~   91 (279)
T PRK07417         69 LLLPPSEQLIPALPPE-AIVTDVG   91 (279)
T ss_pred             HHHHHHHHHHHhCCCC-cEEEeCc
Confidence            42   22333344453 4555554

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.18  E-value=0.23  Score=44.97  Aligned_cols=35  Identities=26%  Similarity=0.248  Sum_probs=31.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ..+|+|+|+|++|..++..+..+|..++..+|.+.
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~   55 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV   55 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            57999999999999999999999998998886543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.17  E-value=0.18  Score=44.65  Aligned_cols=99  Identities=15%  Similarity=0.116  Sum_probs=59.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH-----------------------HHHHHHcCCceEEcCCCCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-----------------------FEIGKKFGITDFINPATCG  258 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~-----------------------~~~~~~lga~~vi~~~~~~  258 (373)
                      .+.+|+|+|+|++|...+..+-.+|.+++..+|.+.-.                       .+.++++..+-.++...  
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~--   97 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT--   97 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence            35789999999999999999999999899998865211                       12233444332222221  


Q ss_pred             CccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCc-eEEEEc
Q 017335          259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVILG  305 (373)
Q Consensus       259 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~G  305 (373)
                       ..+.+...+.. .++|+|++|.........+-+..... + .++..+
T Consensus        98 -~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~ip~i~~~  142 (197)
T cd01492          98 -DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GVKFYATG  142 (197)
T ss_pred             -cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence             11111111221 27999999988766544555555553 4 344444

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.13  E-value=0.35  Score=47.17  Aligned_cols=83  Identities=22%  Similarity=0.262  Sum_probs=49.9

Q ss_pred             CCCCEEEEECC-ChHHHH--HHHHHHHCCCCeEEEEcCChh--H--------------HHHHHHcCCc-eEEcCCCCCCc
Q 017335          201 EVGSTVAIFGL-GAVGLA--VAEGARLNRASKIIGVDINPE--K--------------FEIGKKFGIT-DFINPATCGDK  260 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~--a~~la~~~G~~~Vi~~~~~~~--~--------------~~~~~~lga~-~vi~~~~~~~~  260 (373)
                      ..++++||+|+ +++|++  .++.+ ..|+ +|+++....+  +              .+.+++.|.. ..++.+-..++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            45689999998 789999  55666 7899 7777763221  1              2234556643 23433332223


Q ss_pred             cHHHHHHHhcC--CCccEEEECCCCHH
Q 017335          261 TVSQVIKEMTD--GGADYCFECIGLTS  285 (373)
Q Consensus       261 ~~~~~i~~~~~--~~~d~vid~~g~~~  285 (373)
                      +..+.+.+...  |++|+++++.+.+.
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            33333333322  47999999999764

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.13  Score=47.88  Aligned_cols=81  Identities=19%  Similarity=0.208  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    ..|... .+..+-....++.+.+.+...  +.
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 8999999999989999 8999998876655432    234322 222221111233333333221  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus        84 id~li~nAg~   93 (275)
T PRK05876         84 VDVVFSNAGI   93 (275)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.13  Score=46.84  Aligned_cols=80  Identities=15%  Similarity=0.203  Sum_probs=50.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC--ceEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--TDFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga--~~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +..  -+++..+-...+++...+.+...  +++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            568999998 8999998888888898 89999998877655432 321  12222222111223333333221  36899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (257)
T PRK07074         81 LVANAGA   87 (257)
T ss_pred             EEECCCC
Confidence            9998874

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.11  E-value=0.075  Score=47.19  Aligned_cols=35  Identities=40%  Similarity=0.459  Sum_probs=31.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      ...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35789999999999999999999999889999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.16  Score=46.59  Aligned_cols=75  Identities=21%  Similarity=0.290  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .++++||+|+ |++|...++.+...|+ +|+++++++ ++.+... .+....+..+-   .+. +.+.+.. +.+|++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~---~~~-~~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC---GKE-ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC---CCH-HHHHHhc-CCCCEEEE
Confidence            3689999998 8999999999989999 899988876 2222211 12122222221   111 1233322 36999999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            9874

>PLN00203 glutamyl-tRNA reductase

Probab=95.10  E-value=0.13  Score=52.24  Aligned_cols=97  Identities=15%  Similarity=0.207  Sum_probs=61.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+.+ ++...+. ..     .+. .+.+.. ..+|+||.|+
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~~-----~~~-dl~~al-~~aDVVIsAT  337 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-YK-----PLD-EMLACA-AEADVVFTST  337 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-ee-----cHh-hHHHHH-hcCCEEEEcc
Confidence            6899999999999999999999998789999999888766653 5321111 11     111 111111 2789999998


Q ss_pred             CCHH--HHHHHHHHhcc----CCc--eEEEEccc
Q 017335          282 GLTS--VMNDAFNSSRE----GWG--KTVILGVE  307 (373)
Q Consensus       282 g~~~--~~~~~~~~l~~----~~G--~~v~~G~~  307 (373)
                      +.+.  .....++.+.+    ++.  .+++++.+
T Consensus       338 ~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP  371 (519)
T PLN00203        338 SSETPLFLKEHVEALPPASDTVGGKRLFVDISVP  371 (519)
T ss_pred             CCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence            7644  12233333321    102  47778774

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.09  E-value=0.13  Score=46.42  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+|||+|+ |.+|...+..+...|+ +|++++++.++...+    ++.+.. .++..+-....++.+.+.+...  +.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999988888899 999999986554332    223321 2222222111223333333221  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.+.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999988754

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.08  E-value=0.18  Score=47.31  Aligned_cols=83  Identities=16%  Similarity=0.182  Sum_probs=60.4

Q ss_pred             HHHhC-CCCCCEEEEECCCh-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          195 WKVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       195 ~~~~~-~~~~~~VlI~G~G~-vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      ++..+ --.|++|+|+|.|. +|...+.++...|+ +|.++.+..                      +++.+.+     .
T Consensus       150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~  201 (283)
T PRK14192        150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----K  201 (283)
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----c
Confidence            33434 35789999999976 99999999999999 888887521                      1121111     2


Q ss_pred             CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       273 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      .+|+|++++|.+..+.  .+.++++ ..++++|..+
T Consensus       202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n~  234 (283)
T PRK14192        202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFHP  234 (283)
T ss_pred             cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence            7899999998766333  3668997 9999999754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.06  E-value=0.16  Score=46.46  Aligned_cols=80  Identities=20%  Similarity=0.324  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhc--CCCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMT--DGGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~d~  276 (373)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ ++.. +.+..+-....++.+.+.+..  .+.+|+
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999998 9999999999998999 99999999887665543 3321 222222111123333333322  136899


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      ++.+.|
T Consensus        84 li~~ag   89 (257)
T PRK07067         84 LFNNAA   89 (257)
T ss_pred             EEECCC
Confidence            998876

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.16  Score=45.94  Aligned_cols=80  Identities=9%  Similarity=0.048  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--C-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--G-  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~-  272 (373)
                      .+++++|+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+.    +.+.+. .+.-+....+++.+.+.+...  + 
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999998 7999998888888999 8999999887765442    334322 222221112333333333221  3 


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      .+|++|++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            6999999886

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.15  Score=46.76  Aligned_cols=81  Identities=23%  Similarity=0.308  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCc-eEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMT--DGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~  274 (373)
                      .+.+++|+|+ |++|...+..+...|+ +|+.++++++..+.+++   .+.. ..+..+-....++.+.+.+..  .+.+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999998 9999999998888999 89999988754444332   2322 122222101122222222221  1378


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (263)
T PRK08226         84 DILVNNAGV   92 (263)
T ss_pred             CEEEECCCc
Confidence            999998873

>TIGR00417 speE spermidine synthase

Probab=95.03  E-value=0.27  Score=45.71  Aligned_cols=96  Identities=21%  Similarity=0.199  Sum_probs=61.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C---------ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I---------TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a---------~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++||++|+|. |..+..+++.....+|.+++.+++-.+.+++.- .         -+++.      .+..+.+++ .
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~------~D~~~~l~~-~  142 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI------DDGFKFLAD-T  142 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE------CchHHHHHh-C
Confidence            3456999999876 555666777665668999999988777776521 0         01221      123333332 2


Q ss_pred             CCCccEEE-ECC---C------CHHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCF-ECI---G------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .+.+|+|+ |..   +      ....++.+.+.|+++ |.++...
T Consensus       143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            34899998 443   1      223467889999997 9998764

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=95.02  E-value=0.26  Score=49.14  Aligned_cols=101  Identities=12%  Similarity=0.182  Sum_probs=65.5

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eE--EcCCCCCCccHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIK  267 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v--i~~~~~~~~~~~~~i~  267 (373)
                      .....+++|++||-+|+|+ |-.+..+++.++..+|++++.++++.+.++    ++|.. .+  .+.+.   .+.    .
T Consensus       231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~  302 (426)
T TIGR00563       231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----S  302 (426)
T ss_pred             HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----c
Confidence            3445788999999998865 555556666665339999999999877664    46654 22  22221   111    0


Q ss_pred             Hh-cCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335          268 EM-TDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       268 ~~-~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .. ..+.||.|| |  |+|.                         ...+..+++.|++| |+++..
T Consensus       303 ~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvys  367 (426)
T TIGR00563       303 QWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYA  367 (426)
T ss_pred             ccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            01 123799998 4  5552                         13577889999997 998855

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.01  E-value=0.17  Score=46.17  Aligned_cols=81  Identities=15%  Similarity=0.244  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+    ++.+.. ..+..+-..+.++.+.+.+...  +.
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5789999998 8999999988888899 999999987665443    233421 2222221112333333333322  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        89 id~vi~~ag~   98 (256)
T PRK06124         89 LDILVNNVGA   98 (256)
T ss_pred             CCEEEECCCC
Confidence            8999988874

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.99  E-value=0.12  Score=46.58  Aligned_cols=103  Identities=19%  Similarity=0.343  Sum_probs=66.7

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i  266 (373)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++    .+.+  .++..+.   .++    
T Consensus        37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~----  108 (231)
T TIGR02752        37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA---MEL----  108 (231)
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech---hcC----
Confidence            34456778899999999976 6677788877642 289999999988777653    2222  1222211   110    


Q ss_pred             HHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ...++.+|+|+-+..      ....+..+.+.|++| |+++..-.
T Consensus       109 -~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  152 (231)
T TIGR02752       109 -PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET  152 (231)
T ss_pred             -CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence             122237999985322      123577889999997 99987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK06720 hypothetical protein; Provisional

Probab=94.99  E-value=0.21  Score=43.06  Aligned_cols=80  Identities=21%  Similarity=0.157  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .+.+++|.|+ +++|...+..+...|+ +|+.++++++..+.+    ++.+.. ..+..+-....++.+.+.+..  -++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 7899998888888898 899999887655332    223432 122222211122222222211  136


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|+++++.|
T Consensus        94 iDilVnnAG  102 (169)
T PRK06720         94 IDMLFQNAG  102 (169)
T ss_pred             CCEEEECCC
Confidence            888888877

>PRK06179 short chain dehydrogenase; Provisional

Probab=94.99  E-value=0.068  Score=49.25  Aligned_cols=77  Identities=19%  Similarity=0.316  Sum_probs=50.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCFE  279 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vid  279 (373)
                      +.+++|+|+ |++|...++.+...|+ +|++++++.++.+...  +.. ++..+-...+++.+.+.....  +.+|++|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~-~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVE-LLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCe-eEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            568999998 9999999988888899 8999998876554321  222 222221112334444444322  37899999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9884

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.98  E-value=0.16  Score=46.31  Aligned_cols=81  Identities=14%  Similarity=0.207  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HH-H---HHHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE-I---GKKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~-~---~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+ .   +++.+.. ..+..+-....++.+.+.+...  +
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999998 8999999999999999 89998876532 22 2   2233422 2222222112333333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|++|.+.|.
T Consensus        86 ~id~li~~ag~   96 (254)
T PRK06114         86 ALTLAVNAAGI   96 (254)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK08328 hypothetical protein; Provisional

Probab=94.98  E-value=0.13  Score=46.75  Aligned_cols=36  Identities=25%  Similarity=0.333  Sum_probs=31.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .+.+|+|+|+|++|..++..+...|.+++..+|.+.
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            357899999999999999999999998999988543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.98  E-value=0.15  Score=46.63  Aligned_cols=81  Identities=21%  Similarity=0.300  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH--HHHHHHcCCce-EEcCCCCCCccHHHHHHHhc--CCCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-FINPATCGDKTVSQVIKEMT--DGGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~~d  275 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++..  .+.+++.+.+. ++..+-...+++.+.+.+..  .+++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999998 8999999999999999 89888775432  22334445321 22222211233333333322  23799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++++.|.
T Consensus        86 ~lv~~ag~   93 (251)
T PRK12481         86 ILINNAGI   93 (251)
T ss_pred             EEEECCCc
Confidence            99998773

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.32  Score=45.59  Aligned_cols=104  Identities=18%  Similarity=0.173  Sum_probs=60.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHH----HHHcCCce-EEcCCCCCCccHHHHHHHhcC--
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEI----GKKFGITD-FINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~----~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      -.+.++||+|+ |.+|...+..+...|+ +|+.+.+++++ .+.    ++..|... ++..+-....++.+.+.+...  
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999998 8999998888888899 88888776432 221    22234322 222222111223233333221  


Q ss_pred             CCccEEEECCCCHH--------------------------HHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +++|++|.+.|...                          ....+++.++++ |+++.++.
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS  182 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGS  182 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEec
Confidence            37899998876310                          122344556676 88888875

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=94.97  E-value=0.084  Score=48.05  Aligned_cols=105  Identities=27%  Similarity=0.446  Sum_probs=64.4

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      .+....++|++||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++    .+..  +.+..+.   +++     
T Consensus        40 ~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l-----  110 (233)
T PF01209_consen   40 IKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL-----  110 (233)
T ss_dssp             HHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB------
T ss_pred             HhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----
Confidence            4456788999999998876 7788888888763 299999999998888764    2321  2222222   221     


Q ss_pred             HhcCCCccEEEECCCC------HHHHHHHHHHhccCCceEEEEcccCC
Q 017335          268 EMTDGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       268 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      ...++.||+|.-+.|-      ...+.++.+.|+|| |+++.+.....
T Consensus       111 p~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p  157 (233)
T PF01209_consen  111 PFPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKP  157 (233)
T ss_dssp             -S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-
T ss_pred             cCCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCC
Confidence            1222379999976653      34688999999997 99988876443

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.97  E-value=0.067  Score=47.69  Aligned_cols=103  Identities=21%  Similarity=0.259  Sum_probs=67.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhc-
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT-  270 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~-  270 (373)
                      .....+||-+|.+. |..++.+|+.+.- .+|+.++.+++..+.+++    .|..   +++..+.   .++.+.+.... 
T Consensus        43 ~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda---~~~l~~l~~~~~  118 (205)
T PF01596_consen   43 LTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDA---LEVLPELANDGE  118 (205)
T ss_dssp             HHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-H---HHHHHHHHHTTT
T ss_pred             hcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEecc---HhhHHHHHhccC
Confidence            44567999999865 7888888987642 299999999998888753    4532   2443332   23333333222 


Q ss_pred             CCCccEEE-ECCCC--HHHHHHHHHHhccCCceEEEEccc
Q 017335          271 DGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       271 ~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .+.||.|| |+-=.  ...++.+++.|++| |.++.=...
T Consensus       119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l  157 (205)
T PF01596_consen  119 EGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL  157 (205)
T ss_dssp             TTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred             CCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence            23799999 55432  22477888999997 888866543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.96  E-value=0.16  Score=45.80  Aligned_cols=81  Identities=17%  Similarity=0.268  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+    +..+.. +++..+-....++.+.+++...  ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999998 8999999998888999 999999987765443    222322 2222222112333333433322  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.96  E-value=0.16  Score=46.43  Aligned_cols=81  Identities=17%  Similarity=0.134  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+|||+|+ |++|...+..+...|+ +|+.+++++++.+.+.    +.+.+ +++..+-....++.+.+.....  ++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 8999999998888999 8988888877654432    23322 2222222111223333333222  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.|.
T Consensus        89 ~d~li~~ag~   98 (255)
T PRK06113         89 VDILVNNAGG   98 (255)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.96  E-value=0.13  Score=43.49  Aligned_cols=80  Identities=24%  Similarity=0.250  Sum_probs=49.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN--PEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~--~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      +++||+|+ +++|+..++.+-..|..+|+.+.++  .++.+.+    +..+.. .++..+-...+++...+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            47899998 8999998877777777688889988  4443333    333432 233222211233444444433  237


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999998885

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.96  E-value=0.51  Score=42.69  Aligned_cols=103  Identities=19%  Similarity=0.195  Sum_probs=59.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHH----HHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~----~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      +.++||+|+ |.+|...+.-+...|+ +|+.+.+ +.++..    .+++.+.. +.+..+-..+.++...+.+...  +.
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            579999998 8999998888888999 7766553 323222    22333432 2222221111223223333221  37


Q ss_pred             ccEEEECCCC----------HH---------------HHHHHHHHhccCCceEEEEccc
Q 017335          274 ADYCFECIGL----------TS---------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       274 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +|++|.+.|.          ..               ..+.+.+.++.. |+++.++..
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~  142 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASV  142 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcch
Confidence            8999998873          10               133455666776 899988763

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=94.94  E-value=0.15  Score=40.46  Aligned_cols=93  Identities=25%  Similarity=0.388  Sum_probs=58.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      |.+||-.|+|. |...+.+++.. ..++++++.+++..+.++.    .+.   ..++.      .++.+.......+.+|
T Consensus         1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~~~~~~D   72 (117)
T PF13659_consen    1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPLPDGKFD   72 (117)
T ss_dssp             TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTCTTT-EE
T ss_pred             CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE------CchhhchhhccCceeE
Confidence            56788887754 55555555555 3499999999998887764    232   12332      3444433334445899


Q ss_pred             EEEECCC-C-------------HHHHHHHHHHhccCCceEEEE
Q 017335          276 YCFECIG-L-------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       276 ~vid~~g-~-------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +|+-... .             ...+..+.+.|+++ |.++.+
T Consensus        73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~  114 (117)
T PF13659_consen   73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI  114 (117)
T ss_dssp             EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            9995322 1             23478899999997 998765

...

>PRK06398 aldose dehydrogenase; Validated

Probab=94.94  E-value=0.085  Score=48.47  Aligned_cols=74  Identities=16%  Similarity=0.248  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .++++||+|+ |++|.+.+..+...|+ +|+.+++++++...     ... ..|-.+  +.++.+.+.+...  +.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~-----~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYND-----VDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCc-----eEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 8999999999999999 99999887654321     111 122222  1233333333322  368999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      |++.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998773

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.93  E-value=0.31  Score=37.33  Aligned_cols=85  Identities=18%  Similarity=0.285  Sum_probs=55.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCC---CCeEE-EEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          205 TVAIFGLGAVGLAVAEGARLNR---ASKII-GVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G---~~~Vi-~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      +|.|+|+|.+|.+.+.-+...|   . +|+ ++++++++.+.++ +++.. +..      .+..+.++     ..|+||-
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~-----~advvil   67 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQ-----EADVVIL   67 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHH-----HTSEEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhc-----cCCEEEE
Confidence            5778899999999999988888   6 888 4499999888875 45543 321      12333332     5899999


Q ss_pred             CCCCHHHHHHHHHHh---ccCCceEEEE
Q 017335          280 CIGLTSVMNDAFNSS---REGWGKTVIL  304 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l---~~~~G~~v~~  304 (373)
                      |+.... +...++.+   .++ ..++.+
T Consensus        68 av~p~~-~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred             EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence            999766 44444443   443 455544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.92  E-value=0.18  Score=46.60  Aligned_cols=80  Identities=14%  Similarity=0.180  Sum_probs=48.3

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|++   ++|.+.++.+...|+ +|+.+++++...+.+++    .+....+.-+-....++.+.+.+...  +
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            47899999983   799998888888999 88888876422222222    23222232222112333333333322  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      .+|+++++.|
T Consensus        84 ~iD~linnAg   93 (262)
T PRK07984         84 KFDGFVHSIG   93 (262)
T ss_pred             CCCEEEECCc
Confidence            6899999887

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.92  E-value=0.16  Score=47.11  Aligned_cols=81  Identities=16%  Similarity=0.247  Sum_probs=49.5

Q ss_pred             CCCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--
Q 017335          201 EVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       201 ~~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      -.++++||+|+   +++|++.++.+...|+ +|+.+.+++   ++.+.+ ++++....+..+-...++..+.+.+...  
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            35789999987   4899999988888999 888887664   233333 3345322222222112333333333322  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +.+|+++++.|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            37899999876

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.92  E-value=0.12  Score=47.03  Aligned_cols=77  Identities=16%  Similarity=0.207  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .++++||+|+ |++|...++.+...|+ +|+.+++++++.    ..+. .+++..+-....++.+.+.....  +.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET----VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 8999999998888999 899999887651    1221 12222221011233333333221  378999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      |.+.|.
T Consensus        80 i~~ag~   85 (252)
T PRK07856         80 VNNAGG   85 (252)
T ss_pred             EECCCC
Confidence            998773

>PRK08264 short chain dehydrogenase; Validated

Probab=94.89  E-value=0.19  Score=45.24  Aligned_cols=77  Identities=17%  Similarity=0.214  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .+.++||+|+ |.+|...++.+...|+.+|+++++++++.+.   .+. .+++..+-....++.+.+.. . +.+|+||.
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi~   79 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEA-A-SDVTILVN   79 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHh-c-CCCCEEEE
Confidence            4678999998 9999999999988998689999988766543   221 12222222011222222222 1 26899999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            8876

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=94.84  E-value=0.13  Score=47.20  Aligned_cols=97  Identities=20%  Similarity=0.190  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC----------ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----------TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga----------~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++|||+|+|. |..+-++++.....+|.+++.+++-.+.++++-.          -+++..      |-.+-+++..
T Consensus        75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~~------Dg~~~l~~~~  147 (246)
T PF01564_consen   75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIIIG------DGRKFLKETQ  147 (246)
T ss_dssp             SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEES------THHHHHHTSS
T ss_pred             CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEEh------hhHHHHHhcc
Confidence            3688999998766 5567788887766799999999998888876321          123322      3334444433


Q ss_pred             CCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...+|+|+ |...         +...++.+.+.|+++ |.++.-.
T Consensus       148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  148 EEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             ST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence            22799999 6554         245688999999997 9988765

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.21  Score=44.78  Aligned_cols=74  Identities=16%  Similarity=0.220  Sum_probs=49.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceE-EcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-i~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+  +.++.+.+... .+.+|+++++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a   77 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP   77 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence            5899988 8999999998888999 999999988877655 33444322 22222  12333333322 23689999875


Q ss_pred             C
Q 017335          282 G  282 (373)
Q Consensus       282 g  282 (373)
                      |
T Consensus        78 g   78 (223)
T PRK05884         78 A   78 (223)
T ss_pred             C
Confidence            4

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=94.84  E-value=0.31  Score=47.49  Aligned_cols=44  Identities=34%  Similarity=0.359  Sum_probs=36.8

Q ss_pred             HHHHhCC-CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          194 AWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       194 ~~~~~~~-~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      +.+..+. -.|.+|.|.|.|.+|..+++.+...|+ +|++++.+..
T Consensus       197 a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g  241 (411)
T COG0334         197 ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG  241 (411)
T ss_pred             HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            3444454 489999999999999999999998899 8988887665

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.82  E-value=0.36  Score=43.49  Aligned_cols=100  Identities=15%  Similarity=0.128  Sum_probs=62.2

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce---------EEcCCCCCCcc-HHHHH
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD---------FINPATCGDKT-VSQVI  266 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~---------vi~~~~~~~~~-~~~~i  266 (373)
                      ..+.++.+||+.|+|. |.-++.+|. .|+ .|++++.++...+.+. +.+...         +.....   -+ +...+
T Consensus        33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~---v~~~~~D~  106 (218)
T PRK13255         33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE---ITIYCGDF  106 (218)
T ss_pred             hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc---eEEEECcc
Confidence            3456788999999976 777777775 799 9999999998877653 233210         000000   00 00111


Q ss_pred             HHhc---CCCccEEEECCC--------CHHHHHHHHHHhccCCceEEEE
Q 017335          267 KEMT---DGGADYCFECIG--------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       267 ~~~~---~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .++.   .+.||.|+|..-        ....+..+.++|++| |+++++
T Consensus       107 ~~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        107 FALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             cCCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence            1121   126899998653        233578889999997 975543

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.47  Score=43.12  Aligned_cols=104  Identities=16%  Similarity=0.185  Sum_probs=60.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHH----HHcCCce-EE--cCCCC-CCccHHHHHHHh--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG----KKFGITD-FI--NPATC-GDKTVSQVIKEM--  269 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~----~~lga~~-vi--~~~~~-~~~~~~~~i~~~--  269 (373)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+. +++++.+.+    +..+... .+  |-.+. ....+.+.+.+.  
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999998 8999999999999999 787764 444443322    2223221 11  11110 001222233321  


Q ss_pred             --cC-CCccEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEccc
Q 017335          270 --TD-GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       270 --~~-~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                        .+ +++|+++++.|...                         ....+++.++.. |+++.++..
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~  146 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSA  146 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCc
Confidence              11 26999999877310                         122455666776 999988764

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.81  E-value=0.16  Score=49.78  Aligned_cols=35  Identities=20%  Similarity=0.201  Sum_probs=32.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .+.+|+|+|+|++|..++..+...|++++..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999999999987

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.80  E-value=0.19  Score=45.92  Aligned_cols=81  Identities=17%  Similarity=0.238  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d  275 (373)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++.+.  ..+.+++.+.. +.+..+-...+++.+.+.+...  +.+|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999998 8999999999999999 8888876432  22333344422 2222222111233333333222  3789


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++++.|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.80  E-value=0.18  Score=45.83  Aligned_cols=78  Identities=14%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTD--GGADYCFE  279 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~vid  279 (373)
                      +|+|+|+ |++|.+.+..+...|+ +|+++++++++.+.+.. ++... .+..+-....++.+.+.+...  +++|+++.
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6899998 9999999999989999 89999999887766543 34321 222111011233333333322  37999998


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        81 ~ag~   84 (248)
T PRK10538         81 NAGL   84 (248)
T ss_pred             CCCc
Confidence            8763

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.78  E-value=0.15  Score=53.65  Aligned_cols=76  Identities=29%  Similarity=0.321  Sum_probs=52.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceEEcCCCCCCc
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~lga~~vi~~~~~~~~  260 (373)
                      .+++|+|+|+|+.|+.++..++..|+ +|+++++.+.                     ..+.++++|.+...+..-..+.
T Consensus       326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            57899999999999999999999999 8999987543                     3455667786544433210001


Q ss_pred             cHHHHHHHhcCCCccEEEECCCC
Q 017335          261 TVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      .+.    .+. ..+|.||.++|.
T Consensus       405 ~~~----~~~-~~~DavilAtGa  422 (654)
T PRK12769        405 SLE----SLL-EDYDAVFVGVGT  422 (654)
T ss_pred             CHH----HHH-hcCCEEEEeCCC
Confidence            121    111 269999998885

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.78  E-value=0.12  Score=42.26  Aligned_cols=79  Identities=19%  Similarity=0.293  Sum_probs=50.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .-+|-|+|+|.+|......++..|. .|..+. ++.+..+.+.. ++...+.+..+            .. ..+|++|-+
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~ia   75 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIA   75 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEE
Confidence            4589999999999999999999999 888875 44555555543 44433333221            11 278999999


Q ss_pred             CCCHHHHHHHHHHhcc
Q 017335          281 IGLTSVMNDAFNSSRE  296 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~  296 (373)
                      +.... +..+++.|..
T Consensus        76 vpDda-I~~va~~La~   90 (127)
T PF10727_consen   76 VPDDA-IAEVAEQLAQ   90 (127)
T ss_dssp             S-CCH-HHHHHHHHHC
T ss_pred             echHH-HHHHHHHHHH
Confidence            99887 7777777764

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=94.77  E-value=0.32  Score=44.06  Aligned_cols=76  Identities=25%  Similarity=0.240  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.     ....+.. +.+..+-....++.+.+.+...  +.+|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 8999999998888999 999998875     2222211 2222121111233333333221  368999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      |.+.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            998774

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.67  E-value=0.21  Score=43.23  Aligned_cols=33  Identities=24%  Similarity=0.268  Sum_probs=29.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +|+|+|+|++|...++.+...|..++..+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998899998765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.67  E-value=0.23  Score=44.79  Aligned_cols=81  Identities=17%  Similarity=0.197  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      ++.++||+|+ |.+|...+..+...|+ .|+...++.++.+.+. .++.. +++..+-...+++.+.+.+...  +++|+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999998 9999999998888998 8888888877665543 34421 2222221011223222222221  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|.+.|.
T Consensus        84 vi~~ag~   90 (245)
T PRK12936         84 LVNNAGI   90 (245)
T ss_pred             EEECCCC
Confidence            9998874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.67  E-value=0.2  Score=45.50  Aligned_cols=80  Identities=21%  Similarity=0.322  Sum_probs=50.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGGA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~  274 (373)
                      +.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+    .+.. +.+..+-....++...+.+..  .++.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            357999998 9999999988888999 99999998877655533    2221 122122111123333333322  1368


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+||.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999977753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.63  E-value=0.22  Score=44.18  Aligned_cols=96  Identities=19%  Similarity=0.245  Sum_probs=64.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHHhc-CCCc
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMT-DGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~~~-~~~~  274 (373)
                      ++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .+..  .++.      .++.+.+.... ++.+
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~  112 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL  112 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence            678999999987 7777788877643489999999998887754    2322  2232      22322333222 3378


Q ss_pred             cEEEECCC--------------CHHHHHHHHHHhccCCceEEEEc
Q 017335          275 DYCFECIG--------------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       275 d~vid~~g--------------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      |.|+-...              ....+..+.+.|+++ |.++..-
T Consensus       113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            99885322              244688999999997 9988763

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.63  E-value=0.31  Score=45.93  Aligned_cols=94  Identities=15%  Similarity=0.216  Sum_probs=67.5

Q ss_pred             ccchhhhhHHHHHHHHhCC-CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+||+...... +++..++ -.|++|.|+|. +.+|.-.+.++...|+ +|.+..+...                     
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------  194 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------  194 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence            45555444444 4455554 46999999999 5999999999999999 8888864422                     


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                       +..+.+     ..+|+|+-++|.+..+...+  +++| ..++++|..
T Consensus       195 -~l~e~~-----~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin  233 (301)
T PRK14194        195 -DAKALC-----RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN  233 (301)
T ss_pred             -CHHHHH-----hcCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence             111111     15899999999888666655  8997 999999964

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.62  E-value=0.91  Score=42.08  Aligned_cols=99  Identities=14%  Similarity=0.213  Sum_probs=63.7

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHHh
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...+++|++||=+|+|+ |-.++.++..++ ...|++++.++++.+.++    +.|...  ++..+.   ..+    .. 
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~---~~~----~~-  136 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDG---RVF----GA-  136 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCH---HHh----hh-
Confidence            34678999999998876 555566666653 238999999999887764    456543  222221   111    11 


Q ss_pred             cCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..+.||.|+ |  |+|.                         ...+..+++.+++| |+++...
T Consensus       137 ~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst  199 (264)
T TIGR00446       137 AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST  199 (264)
T ss_pred             hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            123699998 4  4443                         12577888999997 9887543

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.61  E-value=0.078  Score=44.41  Aligned_cols=95  Identities=18%  Similarity=0.126  Sum_probs=56.7

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCC--CC-ccHHHHHHHhcCCCccEEEECCC
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC--GD-KTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~--~~-~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      |+|+|+|++|.+.+..++..|. +|..+.+.+ +.+.+++-|..-.....+.  .. ......  ....+.+|+||-|+-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999998888888999 999999888 7777776553211111000  00 000000  111237999999987


Q ss_pred             CHH---HHHHHHHHhccCCceEEEEc
Q 017335          283 LTS---VMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       283 ~~~---~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...   .++.+...+.++ ..++.+-
T Consensus        77 a~~~~~~l~~l~~~~~~~-t~iv~~q  101 (151)
T PF02558_consen   77 AYQLEQALQSLKPYLDPN-TTIVSLQ  101 (151)
T ss_dssp             GGGHHHHHHHHCTGEETT-EEEEEES
T ss_pred             ccchHHHHHHHhhccCCC-cEEEEEe
Confidence            655   233344444554 5677664

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.61  E-value=0.21  Score=45.64  Aligned_cols=80  Identities=20%  Similarity=0.231  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+|||+|+ |++|...++.+...|+ +|+++.+++ +.+.+    .+.+.. .++..+-....++...+.+...  +.
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999999989999 888888773 32222    233422 2222222111222223332221  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998773

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.59  E-value=0.28  Score=46.70  Aligned_cols=106  Identities=12%  Similarity=0.020  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHH-c---CCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~~-l---ga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .-....+|+|+|+|..|...+..+. ..+..+|.+..+++++.+.+.+ +   |.. +...     .+..+.+     .+
T Consensus       121 a~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av-----~~  189 (314)
T PRK06141        121 ARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAV-----RQ  189 (314)
T ss_pred             CCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHH-----hc
Confidence            3356789999999999999876544 4676699999999888666543 3   321 1111     1222222     26


Q ss_pred             ccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH
Q 017335          274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI  318 (373)
Q Consensus       274 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~  318 (373)
                      +|+|+.++++...+ .-.+.++++ -.+..+|.... ..-+++..
T Consensus       190 aDIVi~aT~s~~pv-l~~~~l~~g-~~i~~ig~~~~-~~~El~~~  231 (314)
T PRK06141        190 ADIISCATLSTEPL-VRGEWLKPG-THLDLVGNFTP-DMRECDDE  231 (314)
T ss_pred             CCEEEEeeCCCCCE-ecHHHcCCC-CEEEeeCCCCc-ccccCCHH
Confidence            99999988865311 112568886 77777775433 22355543

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.59  E-value=0.15  Score=45.67  Aligned_cols=75  Identities=15%  Similarity=0.192  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid  279 (373)
                      .++++||+|+ |.+|...++.+...|+ +|+++.++.++.     ... .++..+-....++.+.+.+.... ++|++|.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPG-ELFACDLADIEQTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCc-eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEE
Confidence            3578999998 9999999999989998 999999876541     111 22222211123333444444333 6899999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            8774

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.57  E-value=0.2  Score=47.00  Aligned_cols=78  Identities=21%  Similarity=0.271  Sum_probs=56.9

Q ss_pred             CCCCEEEEECC-ChHHHH-HHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCC---ceEEcCCCCCCcc-HHHHHHHh
Q 017335          201 EVGSTVAIFGL-GAVGLA-VAEGARLNRASKIIGVDINPEKFEIGKK-----FGI---TDFINPATCGDKT-VSQVIKEM  269 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~-a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga---~~vi~~~~~~~~~-~~~~i~~~  269 (373)
                      +.|++.+|.|+ .++|.+ +-++|+ .|. +|+.+.|+++|++.+++     .++   ..++|...   .+ .-+.+++.
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~  121 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK  121 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence            34789999999 789987 556666 999 89999999999888753     342   23455544   33 35666666


Q ss_pred             cCC-CccEEEECCCC
Q 017335          270 TDG-GADYCFECIGL  283 (373)
Q Consensus       270 ~~~-~~d~vid~~g~  283 (373)
                      ..+ .+-+.+|++|-
T Consensus       122 l~~~~VgILVNNvG~  136 (312)
T KOG1014|consen  122 LAGLDVGILVNNVGM  136 (312)
T ss_pred             hcCCceEEEEecccc
Confidence            666 88899999884

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=94.57  E-value=0.033  Score=31.04  Aligned_cols=22  Identities=23%  Similarity=0.253  Sum_probs=15.9

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP   38 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~   38 (373)
                      |||+++.++++ ++++++|.|.+
T Consensus         1 MkAv~y~G~~~-v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD-VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE-EEEEEE----S
T ss_pred             CcceEEeCCCc-eEEEECCCccc
Confidence            89999999988 99999998875

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.57  E-value=0.22  Score=48.29  Aligned_cols=36  Identities=19%  Similarity=0.199  Sum_probs=32.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .+.+|+|+|+|++|..++..+...|++++..+|.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            357999999999999999999999999999998754

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.54  E-value=0.23  Score=45.28  Aligned_cols=79  Identities=18%  Similarity=0.186  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHHHHcCCceE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+. ++..+.++..+...+ .|-.+  .+++.+.+.+...  +++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999998888999 78776544 344444444343221 22222  1333333333322  37899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998864

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.54  E-value=0.21  Score=40.95  Aligned_cols=95  Identities=13%  Similarity=0.216  Sum_probs=58.1

Q ss_pred             EEEECC-ChHHHHHHHHHHHCC--CCeEEEEcCChhH---HHHHHHcCCceEEcCCCCCCccHHH---------------
Q 017335          206 VAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEK---FEIGKKFGITDFINPATCGDKTVSQ---------------  264 (373)
Q Consensus       206 VlI~G~-G~vG~~a~~la~~~G--~~~Vi~~~~~~~~---~~~~~~lga~~vi~~~~~~~~~~~~---------------  264 (373)
                      |.|+|+ |++|..++...+...  + +|+++.....-   .+.++++.+..+.-.++.....+.+               
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            578999 999999999999987  6 78776654432   2334667877766555300011111               


Q ss_pred             -HHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEE
Q 017335          265 -VIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       265 -~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v  302 (373)
                       .+.++.. ..+|+|+..+-+...+.-.+.+++.+ -++.
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~ia  118 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIA  118 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEE
Confidence             1223333 37889998877777688888888874 4443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.29  Score=44.27  Aligned_cols=78  Identities=12%  Similarity=0.137  Sum_probs=48.6

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      .+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +    +.. +++..+-....++.+.+.+. ...+|+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~   79 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDI   79 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCE
Confidence            57999998 9999999998888999 89999998876654322 1    111 22222221112233333322 225799


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++.+.|.
T Consensus        80 vv~~ag~   86 (243)
T PRK07102         80 VLIAVGT   86 (243)
T ss_pred             EEECCcC
Confidence            9987663

>TIGR00452 methyltransferase, putative

Probab=94.51  E-value=0.19  Score=47.83  Aligned_cols=101  Identities=14%  Similarity=0.047  Sum_probs=63.5

Q ss_pred             HHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH---HHHc-CC---ceEEcCCCCCCccHH
Q 017335          191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI---GKKF-GI---TDFINPATCGDKTVS  263 (373)
Q Consensus       191 ~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~---~~~l-ga---~~vi~~~~~~~~~~~  263 (373)
                      |..+.......++++||-+|+|. |..+..+++. |+..|++++.++.-...   +++. +.   .+++..      +  
T Consensus       110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~--  179 (314)
T TIGR00452       110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------G--  179 (314)
T ss_pred             HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------C--
Confidence            33344555677899999999987 7776666654 66589999988864432   2222 21   122211      1  


Q ss_pred             HHHHHhcCC-CccEEEECC-----CC-HHHHHHHHHHhccCCceEEEE
Q 017335          264 QVIKEMTDG-GADYCFECI-----GL-TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       264 ~~i~~~~~~-~~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~  304 (373)
                        +.++... .||+|+...     .. ...+..+.+.|++| |++++-
T Consensus       180 --ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle  224 (314)
T TIGR00452       180 --IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE  224 (314)
T ss_pred             --HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence              2233322 799998542     12 23688899999997 998864

Known examples to date are restricted to the proteobacteria.

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.47  E-value=0.25  Score=47.49  Aligned_cols=37  Identities=30%  Similarity=0.412  Sum_probs=33.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++...
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~  185 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP  185 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence            57899999999999999999999999 99999987543

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.40  E-value=0.12  Score=38.83  Aligned_cols=85  Identities=24%  Similarity=0.343  Sum_probs=54.6

Q ss_pred             EECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce---EEcCCCCCCccHHHHHHHhcCCCccEEEECCC--
Q 017335          208 IFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD---FINPATCGDKTVSQVIKEMTDGGADYCFECIG--  282 (373)
Q Consensus       208 I~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~---vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g--  282 (373)
                      -+|+|. |..+..+++.-+. +|++++.+++..+.+++.....   +...+.   .++     ...++.||+|+....  
T Consensus         2 diG~G~-G~~~~~l~~~~~~-~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~---~~l-----~~~~~sfD~v~~~~~~~   71 (95)
T PF08241_consen    2 DIGCGT-GRFAAALAKRGGA-SVTGIDISEEMLEQARKRLKNEGVSFRQGDA---EDL-----PFPDNSFDVVFSNSVLH   71 (95)
T ss_dssp             EET-TT-SHHHHHHHHTTTC-EEEEEES-HHHHHHHHHHTTTSTEEEEESBT---TSS-----SS-TT-EEEEEEESHGG
T ss_pred             EecCcC-CHHHHHHHhccCC-EEEEEeCCHHHHHHHHhcccccCchheeehH---HhC-----cccccccccccccccee
Confidence            456664 8888888888445 9999999999888887744322   332222   111     222347999996433  


Q ss_pred             ----CHHHHHHHHHHhccCCceEEE
Q 017335          283 ----LTSVMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       283 ----~~~~~~~~~~~l~~~~G~~v~  303 (373)
                          ....+.++.+.|+++ |++++
T Consensus        72 ~~~~~~~~l~e~~rvLk~g-G~l~~   95 (95)
T PF08241_consen   72 HLEDPEAALREIYRVLKPG-GRLVI   95 (95)
T ss_dssp             GSSHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             eccCHHHHHHHHHHHcCcC-eEEeC
Confidence                233678999999997 99874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.40  E-value=0.26  Score=45.63  Aligned_cols=81  Identities=14%  Similarity=-0.019  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      ...+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+.    ..+.. +++..+-....++.+.+.+..  -++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3468999998 9999999998888999 8999888776544332    23432 222222211122333333221  136


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999988874

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.36  E-value=0.37  Score=45.21  Aligned_cols=43  Identities=21%  Similarity=0.225  Sum_probs=37.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~   43 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA   43 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            37789999999988888888898 99999999999888877765

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.34  E-value=0.26  Score=46.00  Aligned_cols=79  Identities=20%  Similarity=0.227  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH----HHHHHHcC-C-ceEEcCCCCCCccHHHHHHHhcCC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK----FEIGKKFG-I-TDFINPATCGDKTVSQVIKEMTDG--  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~----~~~~~~lg-a-~~vi~~~~~~~~~~~~~i~~~~~~--  272 (373)
                      .|+.|||+|+ +++|.+.++=...+|+ +++..|.+++.    .+..++.| + ..+.|-.+  .+++.+...+..+.  
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEVG  113 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhcC
Confidence            6899999998 7999886666666677 88888877653    33344445 2 12334333  24444433333333  


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|+++|..|-
T Consensus       114 ~V~ILVNNAGI  124 (300)
T KOG1201|consen  114 DVDILVNNAGI  124 (300)
T ss_pred             CceEEEecccc
Confidence            79999998884

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=94.33  E-value=0.12  Score=48.65  Aligned_cols=90  Identities=14%  Similarity=0.162  Sum_probs=57.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      ++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++    .+.. .+...      ++..   ...++.+|+
T Consensus       120 ~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~------D~~~---~~~~~~fD~  187 (287)
T PRK12335        120 KPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGLY------DINS---ASIQEEYDF  187 (287)
T ss_pred             CCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEEe------chhc---ccccCCccE
Confidence            445999999876 666666766 477 99999999987776653    2321 11111      1111   011347999


Q ss_pred             EEECCC--------CHHHHHHHHHHhccCCceEEEE
Q 017335          277 CFECIG--------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       277 vid~~g--------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      |+.+.-        ....+..+.+.|+++ |.++.+
T Consensus       188 I~~~~vl~~l~~~~~~~~l~~~~~~Lkpg-G~~l~v  222 (287)
T PRK12335        188 ILSTVVLMFLNRERIPAIIKNMQEHTNPG-GYNLIV  222 (287)
T ss_pred             EEEcchhhhCCHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            996532        123577788899997 986554

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.32  E-value=0.27  Score=46.59  Aligned_cols=34  Identities=15%  Similarity=0.126  Sum_probs=30.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .++++||+|+ +++|++.++.+...|+ +|+.++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            4789999998 8999999999999999 89998876

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.32  E-value=0.32  Score=44.06  Aligned_cols=83  Identities=19%  Similarity=0.206  Sum_probs=51.9

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc--eEE--cCCCCCCccHHHHHHHhc
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFI--NPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~--~vi--~~~~~~~~~~~~~i~~~~  270 (373)
                      ..++.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+    ++.+..  +++  +.......++.+.+....
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            457889999998 9999998888888899 999999987665443    233322  122  221101123333333222


Q ss_pred             C--CCccEEEECCCC
Q 017335          271 D--GGADYCFECIGL  283 (373)
Q Consensus       271 ~--~~~d~vid~~g~  283 (373)
                      .  +.+|++|.+.+.
T Consensus        88 ~~~~~id~vi~~Ag~  102 (247)
T PRK08945         88 EQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHhCCCCEEEECCcc
Confidence            2  368999987763

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.30  E-value=0.3  Score=44.83  Aligned_cols=81  Identities=23%  Similarity=0.300  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.++||+|+ +++|...+..+...|+ +|+.+++++++.+.+.    +.|... .+..+-....++.+.+.+...  +.
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5679999998 8999998888888999 8999998887654432    334321 222222111223333333222  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++.+.|.
T Consensus        88 id~li~~ag~   97 (265)
T PRK07097         88 IDILVNNAGI   97 (265)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PLN02928 oxidoreductase family protein

Probab=94.29  E-value=0.25  Score=47.73  Aligned_cols=35  Identities=31%  Similarity=0.464  Sum_probs=32.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .|++|.|+|.|.+|..+++.++.+|. +|++.+++.
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~  192 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW  192 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence            47899999999999999999999999 999999863

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.27  E-value=0.27  Score=45.30  Aligned_cols=81  Identities=16%  Similarity=0.293  Sum_probs=48.8

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCC---hhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+   +++|++.++.+...|+ +|+.+.+.   +++.+.+ ++++....+..+-..++++.+.+.....  +
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            4789999994   5899998888888999 88887543   3333333 3345322222222112334444443322  4


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|+++++.|.
T Consensus        84 ~iD~lvnnAG~   94 (260)
T PRK06997         84 GLDGLVHSIGF   94 (260)
T ss_pred             CCcEEEEcccc
Confidence            79999998763

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=94.27  E-value=0.28  Score=47.23  Aligned_cols=94  Identities=17%  Similarity=0.234  Sum_probs=63.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-c--eEEcCCCCCCccHHHHHHHh--cCCCcc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-T--DFINPATCGDKTVSQVIKEM--TDGGAD  275 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~--~vi~~~~~~~~~~~~~i~~~--~~~~~d  275 (373)
                      .++.+||-+|+|. |..+..+++..+..+|+++|.+++..+.+++... .  .++.      .+    +.++  .++.||
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~------gD----~e~lp~~~~sFD  180 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE------GD----AEDLPFPTDYAD  180 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe------cc----HHhCCCCCCcee
Confidence            5688999999876 7777778887654499999999888777765321 1  1221      11    2222  223799


Q ss_pred             EEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          276 YCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|+.+..      ....+.++.+.|++| |+++..+.
T Consensus       181 vVIs~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        181 RYVSAGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             EEEEcChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            9986432      234678899999997 99988754

>PLN02256 arogenate dehydrogenase

Probab=94.27  E-value=0.41  Score=45.41  Aligned_cols=97  Identities=12%  Similarity=0.148  Sum_probs=61.3

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      +.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+.. .       .+..+.+    ...
T Consensus        27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~----~~~   92 (304)
T PLN02256         27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFC----EEH   92 (304)
T ss_pred             HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHh----hCC
Confidence            3344444456789999999999999998888887 8999998864 35566677531 1       1121111    125


Q ss_pred             ccEEEECCCCHHHHHHHHHH-----hccCCceEEEEcc
Q 017335          274 ADYCFECIGLTSVMNDAFNS-----SREGWGKTVILGV  306 (373)
Q Consensus       274 ~d~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~G~  306 (373)
                      +|+||-|+.... +...++.     ++++ ..++.++.
T Consensus        93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence            788888887554 3333332     3454 66666654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.26  E-value=0.22  Score=46.35  Aligned_cols=80  Identities=19%  Similarity=0.166  Sum_probs=53.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc------eEEcCCCCCCcc---HHHHH
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT------DFINPATCGDKT---VSQVI  266 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~------~vi~~~~~~~~~---~~~~i  266 (373)
                      -.++++||+|+ .++|.+.+..+...|+ +|+.+.+++++.+..++    .+..      .+.|-..  +++   ..+..
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~   82 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA   82 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence            46789999998 7999999999999999 99999999988666542    2221      1222222  122   22222


Q ss_pred             HHhcCCCccEEEECCCC
Q 017335          267 KEMTDGGADYCFECIGL  283 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g~  283 (373)
                      .+...|+.|+.++..|.
T Consensus        83 ~~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHHhCCCCCEEEEcCCc
Confidence            23334579999998774

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=94.24  E-value=0.61  Score=46.54  Aligned_cols=102  Identities=20%  Similarity=0.283  Sum_probs=66.4

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~  268 (373)
                      ...++++|++||=+|+|+ |--+.+++..++ ..+|+++|.++++.+.++    ++|.+.  ++..+.   .++    ..
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~  302 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TE  302 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hh
Confidence            345788999999998866 555666677663 238999999999988875    466543  333222   111    11


Q ss_pred             hcCCCccEEE-E--CCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335          269 MTDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       269 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ...+.||.|+ |  |+|..                         ..+..+++.+++| |+++..-.
T Consensus       303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  367 (431)
T PRK14903        303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC  367 (431)
T ss_pred             hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            2234799998 3  44431                         1366888999997 98765543

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.24  E-value=0.53  Score=44.44  Aligned_cols=92  Identities=18%  Similarity=0.268  Sum_probs=56.1

Q ss_pred             CEEEEECCChHHHH-HHHHHHHCCCCeEEE-EcCChh--HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          204 STVAIFGLGAVGLA-VAEGARLNRASKIIG-VDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       204 ~~VlI~G~G~vG~~-a~~la~~~G~~~Vi~-~~~~~~--~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      -+|.|+|.|.+|.. +..+.+.-+. ++.+ ++.+++  .+..++++|.....       .++...+....-..+|+||+
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~   76 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFD   76 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEE
Confidence            47899999999987 4444444456 5554 445544  34567778854322       12322232111137999999


Q ss_pred             CCCCHHHHHHHHHHhccCCceEEEE
Q 017335          280 CIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +++.....+.+..++..| -.+++.
T Consensus        77 AT~a~~H~e~a~~a~eaG-k~VID~  100 (302)
T PRK08300         77 ATSAGAHVRHAAKLREAG-IRAIDL  100 (302)
T ss_pred             CCCHHHHHHHHHHHHHcC-CeEEEC
Confidence            999887666777766664 555444

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.24  E-value=0.56  Score=43.04  Aligned_cols=109  Identities=19%  Similarity=0.232  Sum_probs=69.3

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhc
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...+....++||-+|.+. |..++.+|+.++. .+|+.++.+++..+.++    +.|..+-+....   .+..+.+.++.
T Consensus        73 ~l~~~~~ak~iLEiGT~~-GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l~  148 (247)
T PLN02589         73 MLLKLINAKNTMEIGVYT-GYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQMI  148 (247)
T ss_pred             HHHHHhCCCEEEEEeChh-hHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHHH
Confidence            334455667899998844 7788888887642 28999999998877764    456322222222   34444444442


Q ss_pred             -----CCCccEEEECCCCH---HHHHHHHHHhccCCceEEEEcccCC
Q 017335          271 -----DGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       271 -----~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                           .+.||+||--....   ..++.+++.|++| |.++.=.....
T Consensus       149 ~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~DNvl~~  194 (247)
T PLN02589        149 EDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYDNTLWN  194 (247)
T ss_pred             hccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEcCCCCC
Confidence                 24799999433332   2477888999997 88775444333

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.23  E-value=0.34  Score=47.31  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=31.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .+.+|+|+|+|++|..++..+...|+.++..+|.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45789999999999999999999999899999876

>PRK14968 putative methyltransferase; Provisional

Probab=94.22  E-value=0.53  Score=40.65  Aligned_cols=43  Identities=35%  Similarity=0.494  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      ...++++||.+|+|. |..+..+++. +. +|++++.+++..+.++
T Consensus        20 ~~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~   62 (188)
T PRK14968         20 VDKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAK   62 (188)
T ss_pred             hccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHH
Confidence            347888999998865 6677777776 66 9999999988777664

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.20  E-value=0.3  Score=44.26  Aligned_cols=81  Identities=12%  Similarity=0.119  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEE-EcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~-~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      ++.++||+|+ |.+|+..+..+...|+ +|+. ..++.++.+.+    +..+.. .++..+-....++...+.+...  +
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999998 9999999999999999 7665 46666554332    233432 2222222112333333333322  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998773

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.19  E-value=0.21  Score=45.69  Aligned_cols=75  Identities=15%  Similarity=0.219  Sum_probs=47.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhc--CCCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMT--DGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~--~~~~d~v  277 (373)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.     .+. -..+..+-....++.+.+.+..  .+.+|++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 8999999998888999 899999876532     111 1122111101122222222221  1378999


Q ss_pred             EECCC
Q 017335          278 FECIG  282 (373)
Q Consensus       278 id~~g  282 (373)
                      +++.|
T Consensus        82 i~~ag   86 (260)
T PRK06523         82 VHVLG   86 (260)
T ss_pred             EECCc
Confidence            99887

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.19  E-value=0.34  Score=47.16  Aligned_cols=99  Identities=17%  Similarity=0.249  Sum_probs=64.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHC--CCCeEEEEc--CChhHHH-HHHHcCCceEEcCCCCCCccH--------------H
Q 017335          204 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVD--INPEKFE-IGKKFGITDFINPATCGDKTV--------------S  263 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~--G~~~Vi~~~--~~~~~~~-~~~~lga~~vi~~~~~~~~~~--------------~  263 (373)
                      ++|.|+|+ |++|..++...+..  .+ +|+++.  ++.+++. .+++++...+.-.++.....+              .
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            57999997 99999999988765  56 777775  4444433 346688776654443000011              1


Q ss_pred             HHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          264 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       264 ~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.+.++... .+|+|++++++...+.-.+.+++.| -++.+.
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaLA  121 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIALA  121 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEEe
Confidence            122233333 6999999998876688889999885 665543

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.16  E-value=0.42  Score=43.75  Aligned_cols=99  Identities=11%  Similarity=0.237  Sum_probs=65.3

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      +.....++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++... ..++..+.   .++     ...++.|
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~~f  104 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATATF  104 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCCcE
Confidence            444445678999999976 666655554 576 99999999999888876432 22332221   111     1222379


Q ss_pred             cEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          275 DYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       275 d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |+|+....      ....+..+.+.|+++ |.++....
T Consensus       105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~  141 (251)
T PRK10258        105 DLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL  141 (251)
T ss_pred             EEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            99996533      233578889999997 99887643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.15  E-value=0.29  Score=44.74  Aligned_cols=100  Identities=12%  Similarity=0.120  Sum_probs=59.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc--CCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF--GITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l--ga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .+.+|||+|+ |.+|..+++.+...|. +|+++.+++++.......  ++ .++..+-   .+-.+.+.+....++|+||
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~~~Dl---~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSL-QIVRADV---TEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCce-EEEEeeC---CCCHHHHHHHhhcCCCEEE
Confidence            3679999998 9999999988888898 899998887765433221  22 2222121   1101222222212799999


Q ss_pred             ECCCCHH-------------HHHHHHHHhccC-CceEEEEcc
Q 017335          279 ECIGLTS-------------VMNDAFNSSREG-WGKTVILGV  306 (373)
Q Consensus       279 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~G~  306 (373)
                      .+.|...             ....+++.+... .++++.++.
T Consensus        91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS  132 (251)
T PLN00141         91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS  132 (251)
T ss_pred             ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence            8876421             123445555442 157887764

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.14  E-value=0.3  Score=43.90  Aligned_cols=102  Identities=20%  Similarity=0.351  Sum_probs=66.8

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCC-------ceEEcCCCCCCccHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGI-------TDFINPATCGDKTVSQVI  266 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~lga-------~~vi~~~~~~~~~~~~~i  266 (373)
                      .+.....++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.       ..++..+.   .+.    
T Consensus        44 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  115 (239)
T PRK00216         44 IKWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDA---EAL----  115 (239)
T ss_pred             HHHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEeccc---ccC----
Confidence            3444566788999999987 778888888775 2399999999888777765321       11221111   111    


Q ss_pred             HHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ....+.+|+|+....      ....+..+.+.|+++ |+++.+..
T Consensus       116 -~~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~  159 (239)
T PRK00216        116 -PFPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF  159 (239)
T ss_pred             -CCCCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence             012237899874322      234577889999997 99988765

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.12  E-value=0.5  Score=45.24  Aligned_cols=95  Identities=16%  Similarity=0.067  Sum_probs=64.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE-cC-----CCCCCccHHHHHHHhcCCCccEE
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NP-----ATCGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi-~~-----~~~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      -+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+.+.+..... ..     +-....+..+.+     ..+|+|
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V   78 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA   78 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence            479999999999999998888898 899999998887777654211000 00     000001222111     268999


Q ss_pred             EECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          278 FECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       278 id~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |-++.... +..+++.++++ -.++.+..
T Consensus        79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence            99999887 78888888885 66666643

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.10  E-value=0.5  Score=44.52  Aligned_cols=93  Identities=14%  Similarity=0.200  Sum_probs=66.3

Q ss_pred             ccchhhhhHHHHHHHHhCC-CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHHcCCceEEcCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKKFGITDFINPATCG  258 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~lga~~vi~~~~~~  258 (373)
                      .+||+....+. +++...+ -.|++|+|+|- +.+|.-.+.++...|+ +|.+.. ++.                     
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------  193 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------  193 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence            45555444444 4444444 57999999995 8999999999999999 888874 332                     


Q ss_pred             CccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       259 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                        ++.    +.+ ..+|+|+-++|.+..+...+  +++| ..++++|..
T Consensus       194 --~l~----e~~-~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin  232 (296)
T PRK14188        194 --DLP----AVC-RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN  232 (296)
T ss_pred             --CHH----HHH-hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence              111    111 15899999999988666654  8997 999999974

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=94.10  E-value=0.41  Score=43.31  Aligned_cols=75  Identities=21%  Similarity=0.239  Sum_probs=55.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH--cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK--FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~--lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +++|+|+|.+|...++.+...|. .|++++.++++.+...+  .+. +++..+.    .-.+.+++.--..+|+++-++|
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence            68899999999999999999999 99999999999777433  554 4444443    2233444442238999999999


Q ss_pred             CHH
Q 017335          283 LTS  285 (373)
Q Consensus       283 ~~~  285 (373)
                      ...
T Consensus        76 ~d~   78 (225)
T COG0569          76 NDE   78 (225)
T ss_pred             CCH
Confidence            755

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.08  E-value=2.2  Score=38.44  Aligned_cols=93  Identities=13%  Similarity=0.004  Sum_probs=57.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+.+|||+|+|.++.-=+..+...|+ +|.++...- +....+.+.|.-..+ .+.+.+.+       +  .++++||-+
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~d-------l--~g~~LViaA   92 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKEF-------I--KDKHLIVIA   92 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChHH-------h--CCCcEEEEC
Confidence            47799999999999888888888998 777776432 122222233332232 22211111       1  379999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++....=..+....+.. +.++....
T Consensus        93 TdD~~vN~~I~~~a~~~-~~lvn~vd  117 (223)
T PRK05562         93 TDDEKLNNKIRKHCDRL-YKLYIDCS  117 (223)
T ss_pred             CCCHHHHHHHHHHHHHc-CCeEEEcC
Confidence            99988344455555554 66666543

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=94.07  E-value=0.53  Score=47.15  Aligned_cols=100  Identities=24%  Similarity=0.284  Sum_probs=63.7

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~  268 (373)
                      ......+|++||=+|+|+ |..+..+++.++ ..+|++++.++++.+.++    ++|.+.  ++..+.   .++      
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da---~~~------  313 (445)
T PRK14904        244 LLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDA---RSF------  313 (445)
T ss_pred             HhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcc---ccc------
Confidence            345678999999998865 444445555442 238999999999877664    466543  232222   111      


Q ss_pred             hcCCCccEEE-E--CCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335          269 MTDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       269 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..++.||.|+ |  |+|..                         ..+..+++.+++| |+++..-.
T Consensus       314 ~~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvystc  378 (445)
T PRK14904        314 SPEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPG-GVLVYATC  378 (445)
T ss_pred             ccCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            1123799998 4  55531                         2477888899997 99886543

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.07  E-value=1.1  Score=35.55  Aligned_cols=88  Identities=20%  Similarity=0.288  Sum_probs=60.7

Q ss_pred             EEEEECCChHHHHHHHHHHHC--CCCeEE-EEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          205 TVAIFGLGAVGLAVAEGARLN--RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~--G~~~Vi-~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      +|.|+|.|..|......++..  +. +++ ++++++++.+.+ +++|.. ++       .++.+.+.+   ..+|+|+.+
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~---~~~D~V~I~   69 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLAD---EDVDAVIIA   69 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHH---TTESEEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHh---hcCCEEEEe
Confidence            588999999999887666655  45 555 467777766654 567776 44       233333332   279999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +....-.+.+..++..  |+-+++.-
T Consensus        70 tp~~~h~~~~~~~l~~--g~~v~~EK   93 (120)
T PF01408_consen   70 TPPSSHAEIAKKALEA--GKHVLVEK   93 (120)
T ss_dssp             SSGGGHHHHHHHHHHT--TSEEEEES
T ss_pred             cCCcchHHHHHHHHHc--CCEEEEEc
Confidence            9987778888888888  45566643

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes

Probab=94.07  E-value=0.099  Score=47.08  Aligned_cols=102  Identities=17%  Similarity=0.248  Sum_probs=64.4

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCC-----------CccHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCG-----------DKTVS  263 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~-----------~~~~~  263 (373)
                      .....+++.+|||-|+|. |.-+..+|. .|. +|++++-++...+.+ ++.+...-.......           ..|+-
T Consensus        31 ~~l~~~~~~rvLvPgCG~-g~D~~~La~-~G~-~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF  107 (218)
T PF05724_consen   31 DSLALKPGGRVLVPGCGK-GYDMLWLAE-QGH-DVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFF  107 (218)
T ss_dssp             HHHTTSTSEEEEETTTTT-SCHHHHHHH-TTE-EEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TT
T ss_pred             HhcCCCCCCeEEEeCCCC-hHHHHHHHH-CCC-eEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcccc
Confidence            446778889999999876 666667775 599 999999999888876 333321111111000           00221


Q ss_pred             HHHHHhcC---CCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEc
Q 017335          264 QVIKEMTD---GGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       264 ~~i~~~~~---~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                          +++.   |.||+|+|+..-        ......+.+.|+++ |+++++.
T Consensus       108 ----~l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~-g~~lLi~  155 (218)
T PF05724_consen  108 ----ELPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPG-GRGLLIT  155 (218)
T ss_dssp             ----TGGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEE-EEEEEEE
T ss_pred             ----cCChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCC-CcEEEEE
Confidence                1222   269999998653        44578888999997 9954443

Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=94.06  E-value=0.49  Score=44.34  Aligned_cols=86  Identities=20%  Similarity=0.337  Sum_probs=55.9

Q ss_pred             EEEEECCChHHHHH-HHHHHHCCCCeEEE-EcCChhH--HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          205 TVAIFGLGAVGLAV-AEGARLNRASKIIG-VDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       205 ~VlI~G~G~vG~~a-~~la~~~G~~~Vi~-~~~~~~~--~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      +|.|+|+|.+|... ..+.+..+. ++.+ ++.++++  ++.++++|......       ++...+.   ...+|+|+++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~ia   71 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDA   71 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEEC
Confidence            68899999999865 556555567 5555 4445543  45677788654431       2222221   1279999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEE
Q 017335          281 IGLTSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v  302 (373)
                      ++.....+.+..++..| -.++
T Consensus        72 Tp~~~H~e~a~~al~aG-k~VI   92 (285)
T TIGR03215        72 TSAKAHARHARLLAELG-KIVI   92 (285)
T ss_pred             CCcHHHHHHHHHHHHcC-CEEE
Confidence            99888777777777774 4443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.05  E-value=0.33  Score=49.00  Aligned_cols=72  Identities=25%  Similarity=0.265  Sum_probs=51.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-----HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-----~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ..+.+|+|+|+|.+|+.++.+++..|+ +|.+++..++     ..+.+++.|.....+...    .        ....+|
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~----~--------~~~~~D   80 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP----T--------LPEDTD   80 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc----c--------ccCCCC
Confidence            356799999999999999999999999 8999986542     234456678754443322    1        012689


Q ss_pred             EEEECCCCHH
Q 017335          276 YCFECIGLTS  285 (373)
Q Consensus       276 ~vid~~g~~~  285 (373)
                      +|+-+.|...
T Consensus        81 ~Vv~s~Gi~~   90 (480)
T PRK01438         81 LVVTSPGWRP   90 (480)
T ss_pred             EEEECCCcCC
Confidence            9998888643

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.05  E-value=0.61  Score=43.85  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=36.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~   46 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA   46 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            68999999999988887778898 89999999988887776664

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.05  E-value=0.42  Score=45.17  Aligned_cols=81  Identities=16%  Similarity=0.183  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHH----HHHcCCceEEcCCCCCCccHHHHHHHh-c-CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI----GKKFGITDFINPATCGDKTVSQVIKEM-T-DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~----~~~lga~~vi~~~~~~~~~~~~~i~~~-~-~~~  273 (373)
                      .+.++||+|+ |++|...++.+...|+ +|+++++.. ++.+.    ++..|....+..-+..+.+-.+.+.+. . .+.
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            4689999998 8999999888888899 888887643 23222    233343222222121112222222111 1 247


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=94.04  E-value=0.19  Score=46.14  Aligned_cols=94  Identities=20%  Similarity=0.326  Sum_probs=62.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHH---CCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARL---NRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~---~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.++.+||-+|+|. |..+..+++.   -+. +|++++.+++-.+.+++    .+..   .++..      ++    .+.
T Consensus        54 ~~~~~~vLDlGcGt-G~~~~~l~~~~~~~~~-~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~------d~----~~~  121 (247)
T PRK15451         54 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG------DI----RDI  121 (247)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHhcCCCCC-eEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeC------Ch----hhC
Confidence            56889999999976 6666667764   356 99999999988877754    2221   12211      11    222


Q ss_pred             cCCCccEEEECCC--------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCFECIG--------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..+.+|+|+....        ....+..+.+.|++| |.+++...
T Consensus       122 ~~~~~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpG-G~l~l~e~  165 (247)
T PRK15451        122 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  165 (247)
T ss_pred             CCCCCCEEehhhHHHhCCHHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            2236788775322        124688999999997 99988764

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=94.02  E-value=0.27  Score=49.62  Aligned_cols=100  Identities=18%  Similarity=0.223  Sum_probs=66.6

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc--CCc---eEEcCCCCCCccHHHHHHHh
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF--GIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l--ga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      .+...++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.  +..   .++..+      +..  ...
T Consensus       259 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d------~~~--~~~  328 (475)
T PLN02336        259 VDKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVAD------CTK--KTY  328 (475)
T ss_pred             HHhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEcC------ccc--CCC
Confidence            3445567899999999876 6667778887788 999999999888777542  211   122211      110  011


Q ss_pred             cCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .++.||+|+....      ....+..+.+.|++| |+++...
T Consensus       329 ~~~~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~  369 (475)
T PLN02336        329 PDNSFDVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISD  369 (475)
T ss_pred             CCCCEEEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            1237999996322      234688999999997 9988664

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.00  E-value=0.31  Score=44.89  Aligned_cols=78  Identities=19%  Similarity=0.184  Sum_probs=48.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      +|||+|+ |++|...+..+...|+ +|+.++++.++.+.+.    ..+.+. ++..+-....++.+.+.....  +++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899998 9999998888888899 8999998887655432    233222 222221011222222222221  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|.+.|.
T Consensus        81 lI~~ag~   87 (270)
T PRK05650         81 IVNNAGV   87 (270)
T ss_pred             EEECCCC
Confidence            9998874

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.00  E-value=1.5  Score=41.10  Aligned_cols=38  Identities=18%  Similarity=0.285  Sum_probs=33.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI  242 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~  242 (373)
                      .+|.|+|+|.+|...++.+...|. .|+..+.+++..+.
T Consensus         6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~   43 (286)
T PRK07819          6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA   43 (286)
T ss_pred             cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence            479999999999998888888899 99999999998776

>PRK07791 short chain dehydrogenase; Provisional

Probab=93.98  E-value=0.42  Score=44.67  Aligned_cols=82  Identities=18%  Similarity=0.188  Sum_probs=49.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh---------hHHHHH----HHcCCce-EEcCCCCCCccHHHH
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEIG----KKFGITD-FINPATCGDKTVSQV  265 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~---------~~~~~~----~~lga~~-vi~~~~~~~~~~~~~  265 (373)
                      -.++++||+|+ +++|.+.++.+...|+ +|+.++++.         ++.+.+    ++.|... .+..+-...+++.+.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            35789999998 8999999988888999 888887654         333222    2234322 221221111233333


Q ss_pred             HHHhcC--CCccEEEECCCC
Q 017335          266 IKEMTD--GGADYCFECIGL  283 (373)
Q Consensus       266 i~~~~~--~~~d~vid~~g~  283 (373)
                      +.+...  +.+|+++++.|.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCC
Confidence            333322  479999998874

>PRK08223 hypothetical protein; Validated

Probab=93.98  E-value=0.21  Score=46.71  Aligned_cols=36  Identities=31%  Similarity=0.189  Sum_probs=32.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ...+|+|+|+|++|..+++.+.++|..++..+|.+.
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            457899999999999999999999999999888754

>PRK12743 oxidoreductase; Provisional

Probab=93.97  E-value=0.36  Score=44.08  Aligned_cols=80  Identities=13%  Similarity=0.043  Sum_probs=47.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHH----HHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEI----GKKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~----~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      +++|||+|+ |++|..+++.+...|+ +|+.+. ++.++.+.    +++.|.. +++..+-....++...+.+...  +.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            568999998 8999999999999999 887764 34444333    2334532 2222222111223232333221  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        81 id~li~~ag~   90 (256)
T PRK12743         81 IDVLVNNAGA   90 (256)
T ss_pred             CCEEEECCCC
Confidence            8999988773

>PRK06849 hypothetical protein; Provisional

Probab=93.95  E-value=0.48  Score=46.45  Aligned_cols=98  Identities=12%  Similarity=0.026  Sum_probs=63.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcCC-CccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDG-GADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~~-~~d~v  277 (373)
                      ...+|||+|+ .+.|+..+..++..|. +|+++++++.......+ .+++  .+......++.+.+.+.++... ++|+|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            4579999999 5689999999999999 99999988655432222 1222  2321111235577888777666 89999


Q ss_pred             EECCCCHHHHHHHHHHhccCCceEE
Q 017335          278 FECIGLTSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       278 id~~g~~~~~~~~~~~l~~~~G~~v  302 (373)
                      |-+......+......+..+ .++.
T Consensus        81 IP~~e~~~~~a~~~~~l~~~-~~v~  104 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAY-CEVL  104 (389)
T ss_pred             EECChHHHhHHhhhhhhcCC-cEEE
Confidence            97776433344445556664 4443

>PLN00016 RNA-binding protein; Provisional

Probab=93.94  E-value=0.5  Score=46.12  Aligned_cols=96  Identities=13%  Similarity=0.095  Sum_probs=61.0

Q ss_pred             CCCEEEEE----CC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHH-----------HHHcCCceEEcCCCCCCccHHHH
Q 017335          202 VGSTVAIF----GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-----------GKKFGITDFINPATCGDKTVSQV  265 (373)
Q Consensus       202 ~~~~VlI~----G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~-----------~~~lga~~vi~~~~~~~~~~~~~  265 (373)
                      ...+|||+    |+ |.+|...+..+...|. +|+++++++.....           +...|...+.       .+..+ 
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-  121 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-  121 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-
Confidence            34689999    98 9999999999988998 99999988754321           1223443332       12222 


Q ss_pred             HHHhcCC-CccEEEECCCCHH-HHHHHHHHhccCC-ceEEEEcc
Q 017335          266 IKEMTDG-GADYCFECIGLTS-VMNDAFNSSREGW-GKTVILGV  306 (373)
Q Consensus       266 i~~~~~~-~~d~vid~~g~~~-~~~~~~~~l~~~~-G~~v~~G~  306 (373)
                      +.+.... ++|+|+++.+... ....++++++..+ .+++.++.
T Consensus       122 ~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        122 VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            2232233 8999999877432 2455666665431 36877653

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=93.94  E-value=0.5  Score=47.30  Aligned_cols=100  Identities=20%  Similarity=0.288  Sum_probs=63.8

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~  268 (373)
                      ....++++++||=+|+|+ |..++.+++.+ +..+|++++.++++.+.++    +.|...  ++..+.   .++   ...
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~---~~~---~~~  316 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDA---RKV---HEK  316 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCc---ccc---cch
Confidence            445678899999998865 55556666665 2339999999998877664    456543  332222   111   111


Q ss_pred             hcCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335          269 MTDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       269 ~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      + .+.||+|+ |  |+|.                         ...+..+++.|++| |+++..
T Consensus       317 ~-~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvys  378 (444)
T PRK14902        317 F-AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYS  378 (444)
T ss_pred             h-cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence            1 14799998 4  4432                         12477888999997 998854

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.92  E-value=0.54  Score=43.97  Aligned_cols=94  Identities=20%  Similarity=0.203  Sum_probs=66.3

Q ss_pred             ccchhhhhHHHHHHHHhCCC-CCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~~-~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+||+....+. +++..++. .|++|+|+|.| .+|.-.+.++...|+ +|.++.+..                      
T Consensus       136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t----------------------  191 (285)
T PRK14191        136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT----------------------  191 (285)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc----------------------
Confidence            45555555444 45555553 69999999996 899999999999999 887764321                      


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++.+.++     .+|+|+-++|.+..+.  -+.+++| ..++.+|..
T Consensus       192 ~~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~  231 (285)
T PRK14191        192 KDLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN  231 (285)
T ss_pred             HHHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence            22221121     6899999999887433  4577997 999999974

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=93.90  E-value=0.61  Score=44.20  Aligned_cols=59  Identities=24%  Similarity=0.169  Sum_probs=48.5

Q ss_pred             HHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHHHcCCceEEcC
Q 017335          195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~lga~~vi~~  254 (373)
                      ...+.+.||.++||=.. |.+|...+-++...|+ +++++-.   +.||...++.+|+.-|..+
T Consensus        95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~tp  157 (362)
T KOG1252|consen   95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILTP  157 (362)
T ss_pred             HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEecC
Confidence            45567999999999987 8999999999999999 7777765   4588888999998655543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.89  E-value=0.37  Score=43.36  Aligned_cols=80  Identities=23%  Similarity=0.321  Sum_probs=48.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      ++++||+|+ |.+|...+..+...|+ +|+++ +++.++.+.+..    .+.. .++..+-....++.+.+.....  ++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            568999998 9999998888878899 88888 887766544322    2221 2222222111223222322211  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+||.+.|.
T Consensus        84 id~vi~~ag~   93 (247)
T PRK05565         84 IDILVNNAGI   93 (247)
T ss_pred             CCEEEECCCc
Confidence            9999988764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=93.87  E-value=0.38  Score=47.30  Aligned_cols=106  Identities=14%  Similarity=0.192  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHH-------HHHHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335          199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-------IGKKFGITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       199 ~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~-------~~~~lga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .-..+.+|||+|+ |.+|..++..+...|. +|++++++..+..       ........+++..+-.....+.+.+... 
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-  133 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-  133 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-
Confidence            3456779999998 9999999999988999 8999998765421       1111211223322220112232333221 


Q ss_pred             CCCccEEEECCCCH------------HHHHHHHHHhccC-CceEEEEcc
Q 017335          271 DGGADYCFECIGLT------------SVMNDAFNSSREG-WGKTVILGV  306 (373)
Q Consensus       271 ~~~~d~vid~~g~~------------~~~~~~~~~l~~~-~G~~v~~G~  306 (373)
                      ..++|+||+|.+..            .....+++.++.. -++++.++.
T Consensus       134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS  182 (390)
T PLN02657        134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA  182 (390)
T ss_pred             CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence            11699999987631            0122344544442 146887764

>PTZ00146 fibrillarin; Provisional

Probab=93.85  E-value=0.62  Score=43.74  Aligned_cols=102  Identities=20%  Similarity=0.176  Sum_probs=61.9

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHH----HH-cCCceEEcCCCCCCccHHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIG----KK-FGITDFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~----~~-lga~~vi~~~~~~~~~~~~~i~~  268 (373)
                      ++...++++++||=+|+|+ |..+..+++..|. .+|++++.+++-.+.+    ++ .+...++ .+.    ........
T Consensus       125 ~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~-~Da----~~p~~y~~  198 (293)
T PTZ00146        125 VANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPII-EDA----RYPQKYRM  198 (293)
T ss_pred             cceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEE-CCc----cChhhhhc
Confidence            3455789999999999977 7788888888763 3899999886533222    22 1222222 221    01111111


Q ss_pred             hcCCCccEEEECCCCHH----HHHHHHHHhccCCceEEEE
Q 017335          269 MTDGGADYCFECIGLTS----VMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       269 ~~~~~~d~vid~~g~~~----~~~~~~~~l~~~~G~~v~~  304 (373)
                      .. +.+|+||-.+..+.    ....+.+.|+++ |++++.
T Consensus       199 ~~-~~vDvV~~Dva~pdq~~il~~na~r~LKpG-G~~vI~  236 (293)
T PTZ00146        199 LV-PMVDVIFADVAQPDQARIVALNAQYFLKNG-GHFIIS  236 (293)
T ss_pred             cc-CCCCEEEEeCCCcchHHHHHHHHHHhccCC-CEEEEE
Confidence            11 36999995443222    234677799997 998874

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.83  E-value=0.43  Score=49.25  Aligned_cols=94  Identities=11%  Similarity=0.139  Sum_probs=64.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      ++++|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...+. .+. .++   +.+++.--+.+|.++-++++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~-GD~-~~~---~~L~~a~i~~a~~viv~~~~  491 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVL-GNA-ANE---EIMQLAHLDCARWLLLTIPN  491 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEE-cCC-CCH---HHHHhcCccccCEEEEEcCC
Confidence            689999999999999999999999 999999999999999988865443 333 112   22333222378988877665


Q ss_pred             HHH---HHHHHHHhccCCceEEEE
Q 017335          284 TSV---MNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       284 ~~~---~~~~~~~l~~~~G~~v~~  304 (373)
                      ...   +-.+.+...+. .+++.-
T Consensus       492 ~~~~~~iv~~~~~~~~~-~~iiar  514 (558)
T PRK10669        492 GYEAGEIVASAREKRPD-IEIIAR  514 (558)
T ss_pred             hHHHHHHHHHHHHHCCC-CeEEEE
Confidence            431   11233444443 555543

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.80  E-value=0.67  Score=44.50  Aligned_cols=37  Identities=38%  Similarity=0.363  Sum_probs=33.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++++.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~  181 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK  181 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence            56799999999999999999999999 99999987654

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=93.74  E-value=0.83  Score=45.62  Aligned_cols=103  Identities=17%  Similarity=0.252  Sum_probs=64.5

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~  268 (373)
                      ....+++|++||=+|+|+ |..+..+++.++ ..+|++++.++++.+.++    ++|.+.  +++.+.   .++... ..
T Consensus       246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~---~~~~~~-~~  320 (434)
T PRK14901        246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADS---RNLLEL-KP  320 (434)
T ss_pred             HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCCh---hhcccc-cc
Confidence            345778999999998865 555556666653 238999999999887764    467643  333222   111000 00


Q ss_pred             hcCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335          269 MTDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       269 ~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ...+.||.|+ |  |+|.                         ...+..+++.+++| |+++..
T Consensus       321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpg-G~lvys  383 (434)
T PRK14901        321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPG-GTLVYA  383 (434)
T ss_pred             cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEE
Confidence            1123799998 5  4442                         13477889999997 988744

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=93.72  E-value=0.25  Score=50.56  Aligned_cols=93  Identities=13%  Similarity=0.070  Sum_probs=60.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+++|+|+|+|++|.+++..+...|+ +|+++.++.++.+.+. .++.. ++...     ++    .+......|++++|
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~-----~~----~~~~~~~~diiINt  446 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLA-----DL----ENFHPEEGMILANT  446 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHh-----Hh----hhhccccCeEEEec
Confidence            46799999999999999999999999 9999999888766654 34432 22111     11    11111257899988


Q ss_pred             CCCHHH-----HHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTSV-----MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~-----~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++....     ...-...+++. +.++++-.
T Consensus       447 T~vGm~~~~~~~pl~~~~l~~~-~~v~D~vY  476 (529)
T PLN02520        447 TSVGMQPNVDETPISKHALKHY-SLVFDAVY  476 (529)
T ss_pred             ccCCCCCCCCCCcccHhhCCCC-CEEEEecc
Confidence            763320     01123456775 77777754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=93.71  E-value=0.46  Score=43.55  Aligned_cols=80  Identities=18%  Similarity=0.154  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH-HH----cCCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KK----FGIT-DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~-~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+.+ +.    .+.. +.+..+-...+++.+.+.+...  
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            5789999998 8999999998889999 7877754 44443332 21    2322 2222222112333333333322  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +.+|+++++.|
T Consensus        86 g~id~lv~nAg   96 (260)
T PRK08416         86 DRVDFFISNAI   96 (260)
T ss_pred             CCccEEEECcc
Confidence            37899998875

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=93.70  E-value=0.74  Score=40.74  Aligned_cols=34  Identities=32%  Similarity=0.412  Sum_probs=30.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      +.+|+|+|+|++|...+..+-..|.+++..+|.+
T Consensus        19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4789999999999999999999999889888864

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=93.70  E-value=0.21  Score=45.81  Aligned_cols=75  Identities=19%  Similarity=0.255  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.   ..... ..|-.+  ..++.+.+.+...  +.+|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 9999999999999999 89998887655321   11111 122222  1233333333222  378999


Q ss_pred             EECCC
Q 017335          278 FECIG  282 (373)
Q Consensus       278 id~~g  282 (373)
                      +.+.|
T Consensus        82 i~~Ag   86 (266)
T PRK06171         82 VNNAG   86 (266)
T ss_pred             EECCc
Confidence            99877

>PRK05855 short chain dehydrogenase; Validated

Probab=93.68  E-value=0.33  Score=49.80  Aligned_cols=81  Identities=16%  Similarity=0.200  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.    +.|.. .++..+-.....+.+.+.+...  +.
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            3578999998 9999999988888999 8999999887765543    23432 2222221111223333333222  36


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus       393 id~lv~~Ag~  402 (582)
T PRK05855        393 PDIVVNNAGI  402 (582)
T ss_pred             CcEEEECCcc
Confidence            8999999874

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.68  E-value=0.46  Score=42.77  Aligned_cols=84  Identities=11%  Similarity=0.166  Sum_probs=55.4

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       206 VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      |+|+|+ |.+|...++.+...+. +|.++.|+..  ....++..|+..+ ..+-    +-.+.+.+... ++|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence            789998 9999999999999888 8999998764  3555677888544 3322    11223333222 8999998888


Q ss_pred             C---HH--HHHHHHHHhcc
Q 017335          283 L---TS--VMNDAFNSSRE  296 (373)
Q Consensus       283 ~---~~--~~~~~~~~l~~  296 (373)
                      .   ..  ....+.++.+.
T Consensus        74 ~~~~~~~~~~~~li~Aa~~   92 (233)
T PF05368_consen   74 PSHPSELEQQKNLIDAAKA   92 (233)
T ss_dssp             CSCCCHHHHHHHHHHHHHH
T ss_pred             cchhhhhhhhhhHHHhhhc
Confidence            3   22  23345555555

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional

Probab=93.68  E-value=1.2  Score=42.63  Aligned_cols=97  Identities=18%  Similarity=0.134  Sum_probs=61.2

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH---HH-cCC---ceEEcCCCCCCccHHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG---KK-FGI---TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~---~~-lga---~~vi~~~~~~~~~~~~~i~  267 (373)
                      .......+|.+||-+|+|. |..+..+++. |...|++++.++.-....   ++ .+.   -+++..      +    +.
T Consensus       115 ~~~l~~l~g~~VLDIGCG~-G~~~~~la~~-g~~~V~GiD~S~~~l~q~~a~~~~~~~~~~i~~~~~------d----~e  182 (322)
T PRK15068        115 LPHLSPLKGRTVLDVGCGN-GYHMWRMLGA-GAKLVVGIDPSQLFLCQFEAVRKLLGNDQRAHLLPL------G----IE  182 (322)
T ss_pred             HHhhCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEeC------C----HH
Confidence            3344445789999999987 7777788776 555799999887543322   12 221   112211      1    12


Q ss_pred             Hhc-CCCccEEEECC-----C-CHHHHHHHHHHhccCCceEEEE
Q 017335          268 EMT-DGGADYCFECI-----G-LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       268 ~~~-~~~~d~vid~~-----g-~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ++. ++.||+|+...     . -...+..+.+.|++| |++++-
T Consensus       183 ~lp~~~~FD~V~s~~vl~H~~dp~~~L~~l~~~LkpG-G~lvl~  225 (322)
T PRK15068        183 QLPALKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPG-GELVLE  225 (322)
T ss_pred             HCCCcCCcCEEEECChhhccCCHHHHHHHHHHhcCCC-cEEEEE
Confidence            222 34799999632     1 134588999999997 998864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=93.64  E-value=0.34  Score=51.22  Aligned_cols=81  Identities=20%  Similarity=0.288  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCc--eEEcCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT--DFINPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~--~vi~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+     .+..  ..+..+-....++.+.+.+..  -
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3789999998 9999999998888999 99999998876654421     2321  122222211133333333332  2


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|++|++.|.
T Consensus       492 g~iDilV~nAG~  503 (676)
T TIGR02632       492 GGVDIVVNNAGI  503 (676)
T ss_pred             CCCcEEEECCCC
Confidence            379999998874

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=93.64  E-value=1  Score=44.86  Aligned_cols=101  Identities=14%  Similarity=0.244  Sum_probs=64.7

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ....+++|++||=+|+|+ |..+..+++..+..+|++++.++++.+.++    ++|.. .++..+.   .+.    ....
T Consensus       238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~---~~~----~~~~  309 (427)
T PRK10901        238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA---RDP----AQWW  309 (427)
T ss_pred             HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc---ccc----hhhc
Confidence            345678999999998865 555566666654239999999998877764    35542 3343332   111    1111


Q ss_pred             -CCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEEc
Q 017335          271 -DGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 -~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                       .+.||.|+ |  |++.                         ...+..+++.|++| |+++..-
T Consensus       310 ~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvyst  372 (427)
T PRK10901        310 DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYAT  372 (427)
T ss_pred             ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence             23799998 3  3331                         13577888999997 9988543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.62  E-value=0.48  Score=49.56  Aligned_cols=77  Identities=19%  Similarity=0.270  Sum_probs=59.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      .++|+|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|.. ++..+. .+.+.   +++.--+.+|.++-+++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~-v~~GDa-t~~~~---L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMK-VFYGDA-TRMDL---LESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCe-EEEEeC-CCHHH---HHhcCCCcCCEEEEEeC
Confidence            4689999999999999999999999 899999999999999988864 444443 12332   33322227999999998


Q ss_pred             CHH
Q 017335          283 LTS  285 (373)
Q Consensus       283 ~~~  285 (373)
                      +..
T Consensus       474 d~~  476 (621)
T PRK03562        474 DPQ  476 (621)
T ss_pred             CHH
Confidence            866

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=93.61  E-value=0.2  Score=46.89  Aligned_cols=96  Identities=18%  Similarity=0.045  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      ..+.+|+|+|+|++|.+++..+...|+.+|+++.++.++.+.+.+ ++....+.. .   .+.    .+. -..+|+|++
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~----~~~-~~~~DivIn  191 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LEL----QEE-LADFDLIIN  191 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccc----hhc-cccCCEEEE
Confidence            457799999999999999999999996699999999988766543 332110100 0   000    011 127999999


Q ss_pred             CCCCHHH-----HHHHHHHhccCCceEEEEcc
Q 017335          280 CIGLTSV-----MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       280 ~~g~~~~-----~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |++....     .......++++ ..++++-.
T Consensus       192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~DivY  222 (278)
T PRK00258        192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMIY  222 (278)
T ss_pred             CCcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence            9875431     01234567786 88888844

>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []

Probab=93.60  E-value=0.31  Score=48.80  Aligned_cols=133  Identities=14%  Similarity=0.121  Sum_probs=63.3

Q ss_pred             ceeeeEEeeccceEEcCCCCChhhhhccchh------hhh-HHHHHHHHhCCC----CCCEEEEECC--ChHHHHHHHHH
Q 017335          156 SFTEYSVVDITHVVKITPHIPLGIACLLSCG------VST-GVGAAWKVAGVE----VGSTVAIFGL--GAVGLAVAEGA  222 (373)
Q Consensus       156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~------~~t-a~~~~~~~~~~~----~~~~VlI~G~--G~vG~~a~~la  222 (373)
                      +|.+|.+.|   +-++-|+|+......+.-.      +-. ...++.+...-.    .+..|+++|+  |++...+++.+
T Consensus       132 ~~~d~Lq~P---LqPl~dnL~s~tYe~fE~D~vKY~~Ye~AI~~al~D~~~~~~~~~~~~vVldVGAGrGpL~~~al~A~  208 (448)
T PF05185_consen  132 GYEDYLQAP---LQPLMDNLESQTYEVFEKDPVKYDQYERAIEEALKDRVRKNSYSSKDKVVLDVGAGRGPLSMFALQAG  208 (448)
T ss_dssp             -----EE-------TTTS---HHHHHHHCC-HHHHHHHHHHHHHHHHHHHTTS-SEETT-EEEEES-TTSHHHHHHHHTT
T ss_pred             hchhhccCC---CCCchhhhccccHhhHhcCHHHHHHHHHHHHHHHHhhhhhccccccceEEEEeCCCccHHHHHHHHHH
Confidence            577777765   5566677764444433211      001 122233433333    2568999987  67777777776


Q ss_pred             HH-CCCCeEEEEcCChhHHHHH----HHcC---CceEEcCCCCCCccHHHHHHHhcCC-CccEEE-ECCCC-------HH
Q 017335          223 RL-NRASKIIGVDINPEKFEIG----KKFG---ITDFINPATCGDKTVSQVIKEMTDG-GADYCF-ECIGL-------TS  285 (373)
Q Consensus       223 ~~-~G~~~Vi~~~~~~~~~~~~----~~lg---a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vi-d~~g~-------~~  285 (373)
                      +. .++.+|++++.++.....+    ++-+   .-.|++.+-          +++... ++|+++ +..|+       +.
T Consensus       209 ~~~~~a~~VyAVEkn~~A~~~l~~~v~~n~w~~~V~vi~~d~----------r~v~lpekvDIIVSElLGsfg~nEl~pE  278 (448)
T PF05185_consen  209 ARAGGAVKVYAVEKNPNAVVTLQKRVNANGWGDKVTVIHGDM----------REVELPEKVDIIVSELLGSFGDNELSPE  278 (448)
T ss_dssp             HHHCCESEEEEEESSTHHHHHHHHHHHHTTTTTTEEEEES-T----------TTSCHSS-EEEEEE---BTTBTTTSHHH
T ss_pred             HHhCCCeEEEEEcCCHhHHHHHHHHHHhcCCCCeEEEEeCcc----------cCCCCCCceeEEEEeccCCccccccCHH
Confidence            54 4456999999987654443    3322   334665543          333323 899999 55553       22


Q ss_pred             HHHHHHHHhccCCceEE
Q 017335          286 VMNDAFNSSREGWGKTV  302 (373)
Q Consensus       286 ~~~~~~~~l~~~~G~~v  302 (373)
                      .+...-+.|+++ |.++
T Consensus       279 ~Lda~~rfLkp~-Gi~I  294 (448)
T PF05185_consen  279 CLDAADRFLKPD-GIMI  294 (448)
T ss_dssp             HHHHGGGGEEEE-EEEE
T ss_pred             HHHHHHhhcCCC-CEEe
Confidence            344555567786 7654

These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....

>PRK06436 glycerate dehydrogenase; Provisional

Probab=93.59  E-value=0.34  Score=45.91  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=32.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .|++|.|+|.|.+|...+++++.+|. +|++.+++.
T Consensus       121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~  155 (303)
T PRK06436        121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY  155 (303)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence            58999999999999999999999999 999999763

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.59  E-value=0.4  Score=44.42  Aligned_cols=36  Identities=33%  Similarity=0.380  Sum_probs=31.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4678999998 9999999998888999 8999988654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.58  E-value=0.28  Score=46.11  Aligned_cols=92  Identities=15%  Similarity=0.131  Sum_probs=57.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC--ccHHHHHHHhcCCCccEEEECCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD--KTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~--~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +|+|+|+|.+|.+.+..+...|. +|..+++++++.+.+++.|...  + +....  ........+.  +.+|+||-++.
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k   75 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK   75 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence            58999999999998888888898 8999998888777777656421  1 00000  0000011111  37899999988


Q ss_pred             CHHHHHHHHHHh----ccCCceEEEE
Q 017335          283 LTSVMNDAFNSS----REGWGKTVIL  304 (373)
Q Consensus       283 ~~~~~~~~~~~l----~~~~G~~v~~  304 (373)
                      ... ...+++.+    .++ ..++.+
T Consensus        76 ~~~-~~~~~~~l~~~l~~~-~~iv~~   99 (304)
T PRK06522         76 AYQ-LPAALPSLAPLLGPD-TPVLFL   99 (304)
T ss_pred             ccc-HHHHHHHHhhhcCCC-CEEEEe
Confidence            655 44444444    343 455554

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=93.58  E-value=0.79  Score=43.65  Aligned_cols=87  Identities=23%  Similarity=0.262  Sum_probs=59.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -.+++|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|+. +.        ++.+.+     ...|+|+-+
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaa-----k~ADVV~ll   78 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAV-----RTAQVVQML   78 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHH-----hcCCEEEEe
Confidence            358899999999999999999999999 888876655555556666763 21        122222     168999988


Q ss_pred             CCCHHH---H-HHHHHHhccCCceEEE
Q 017335          281 IGLTSV---M-NDAFNSSREGWGKTVI  303 (373)
Q Consensus       281 ~g~~~~---~-~~~~~~l~~~~G~~v~  303 (373)
                      +..+..   + ...+..|+++ ..+++
T Consensus        79 LPd~~t~~V~~~eil~~MK~G-aiL~f  104 (335)
T PRK13403         79 LPDEQQAHVYKAEVEENLREG-QMLLF  104 (335)
T ss_pred             CCChHHHHHHHHHHHhcCCCC-CEEEE
Confidence            876442   2 3456677885 55443

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.55  E-value=0.79  Score=43.91  Aligned_cols=95  Identities=19%  Similarity=0.136  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHH-Hc----CCceEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KF----GITDFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~-~l----ga~~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      +...+++|+|+|..|.+.+..+. ..++++|.+..++.++.+.+. ++    |.. +...     .+..+.+     ..+
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av-----~~a  195 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAM-----SGA  195 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHh-----ccC
Confidence            44568999999999988877776 578778999999998866553 33    432 2211     1232222     269


Q ss_pred             cEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       275 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      |+|+.|+++.. .--..+.++++ -.+..+|...
T Consensus       196 DiVvtaT~s~~-p~i~~~~l~~g-~~i~~vg~~~  227 (326)
T TIGR02992       196 DIIVTTTPSET-PILHAEWLEPG-QHVTAMGSDA  227 (326)
T ss_pred             CEEEEecCCCC-cEecHHHcCCC-cEEEeeCCCC
Confidence            99999988654 11123468886 7888888653

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=93.52  E-value=0.81  Score=38.14  Aligned_cols=94  Identities=15%  Similarity=0.095  Sum_probs=64.3

Q ss_pred             ccchhhhhHHHHHHHHhCC-CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+++....... +++..++ -.|++|+|+|. ..+|.-++.++...|+ +|..+.+...                     
T Consensus         7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------   63 (140)
T cd05212           7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------   63 (140)
T ss_pred             ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence            34444443333 3444444 46999999998 7899999999999998 8888875422                     


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                       ++.+.+     ..+|+|+-++|....+.  -+.+++| ..++.+|..
T Consensus        64 -~l~~~v-----~~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~  102 (140)
T cd05212          64 -QLQSKV-----HDADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPT  102 (140)
T ss_pred             -CHHHHH-----hhCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCC
Confidence             121112     16899999999876443  4569997 888888763

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK06153 hypothetical protein; Provisional

Probab=93.51  E-value=0.27  Score=47.78  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=31.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .+.+|+|+|+|++|..++..+-.+|..+++.+|.+
T Consensus       175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D  209 (393)
T PRK06153        175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD  209 (393)
T ss_pred             hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence            45799999999999999999999999899998865

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=93.50  E-value=0.31  Score=46.55  Aligned_cols=97  Identities=20%  Similarity=0.172  Sum_probs=60.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----ITDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----a~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ..++.+||=+|+|. |..+..+++ .|+ +|+++|.+++..+.++...    ...-+....   .+. +.+. ..++.||
T Consensus       129 ~~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~---~da-e~l~-~~~~~FD  200 (322)
T PLN02396        129 PFEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC---TTA-EKLA-DEGRKFD  200 (322)
T ss_pred             CCCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe---cCH-HHhh-hccCCCC
Confidence            34677999999865 555555554 577 9999999999888886421    100011111   111 1111 1223799


Q ss_pred             EEEEC-----C-CCHHHHHHHHHHhccCCceEEEEc
Q 017335          276 YCFEC-----I-GLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       276 ~vid~-----~-g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +|+..     + .....+..+.+.|++| |.+++.-
T Consensus       201 ~Vi~~~vLeHv~d~~~~L~~l~r~LkPG-G~liist  235 (322)
T PLN02396        201 AVLSLEVIEHVANPAEFCKSLSALTIPN-GATVLST  235 (322)
T ss_pred             EEEEhhHHHhcCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            99842     2 2234678889999997 9988663

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.50  E-value=1.2  Score=42.61  Aligned_cols=39  Identities=21%  Similarity=0.197  Sum_probs=33.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      .+|.|+|+|.+|...++.+...|+ +|.+.+.+++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence            589999999999998888888999 999999998765543

>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]

Probab=93.49  E-value=0.46  Score=42.34  Aligned_cols=98  Identities=15%  Similarity=0.110  Sum_probs=73.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-  272 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-  272 (373)
                      ++....+..-.+|.-+|+|+ |..+-.+++.-.-..|.+++++++-++.++....+.-+..         ..++++.+. 
T Consensus        22 Lla~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~---------aDl~~w~p~~   91 (257)
T COG4106          22 LLARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEE---------ADLRTWKPEQ   91 (257)
T ss_pred             HHhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceec---------ccHhhcCCCC
Confidence            44556677788899999998 8899999998775599999999999999887665433221         235667666 


Q ss_pred             CccEEEECCC------CHHHHHHHHHHhccCCceEE
Q 017335          273 GADYCFECIG------LTSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       273 ~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v  302 (373)
                      ..|++|-..-      ....+..++..|.+| |.+.
T Consensus        92 ~~dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA  126 (257)
T COG4106          92 PTDLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA  126 (257)
T ss_pred             ccchhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE
Confidence            7899884322      345689999999997 8754

>PRK03612 spermidine synthase; Provisional

Probab=93.49  E-value=0.46  Score=48.59  Aligned_cols=96  Identities=16%  Similarity=0.185  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C------------ceEEcCCCCCCccHHHHHH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I------------TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a------------~~vi~~~~~~~~~~~~~i~  267 (373)
                      ++.++||++|+|. |..+.++++.-+.++|++++.+++-.+.+++.. .            -+++.      .|..+.++
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~------~Da~~~l~  368 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVN------DDAFNWLR  368 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEE------ChHHHHHH
Confidence            4568999999875 667777777655459999999999988887621 0            01222      23333333


Q ss_pred             HhcCCCccEEE-ECCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017335          268 EMTDGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       268 ~~~~~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      + .++.+|+|+ |....          .+.++.+.+.|+++ |.++.-.
T Consensus       369 ~-~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~  415 (521)
T PRK03612        369 K-LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS  415 (521)
T ss_pred             h-CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence            2 234899999 43321          12467889999997 9988654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	373
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		7e-66
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		1e-65
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-56
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-56
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		4e-56
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		4e-56
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		4e-56
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-53
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		3e-53
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		3e-53
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		4e-53
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		5e-53
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		6e-53
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		6e-53
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		1e-52
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		1e-52
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-52
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-52
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-52
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-52
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		2e-52
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		3e-52
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-52
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		9e-52
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		6e-50
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		1e-49
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		3e-48
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		1e-47
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		2e-47
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		2e-47
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		3e-47
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		3e-21
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		9e-08
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		1e-06
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		1e-06
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		1e-05
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		2e-05
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-05
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-05
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-05
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		1e-04
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		1e-04
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		1e-04
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		2e-04
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		4e-04
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		4e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  247 bits (631), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 183/341 (53%), Gaps = 5/341 (1%)
Query: 11  GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           G+VI CKAA+   P KPL          +A E+RIKIL T+LCH+D   W  S   P+  
Sbjct: 4   GQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTW--SGKDPEGL 61
Query: 71  LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
            P I                      D V+P +  +C EC+ CKS K+N C K       
Sbjct: 62  FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 121
Query: 131 N-MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             M  D  SRF  + G  I+HF+  S+F++Y+VV    V KI P  PL   CLL CGV T
Sbjct: 122 GIMMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPT 180
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G+GA W  A VE GS VAIF             +   AS+IIG+DI+ +K+E  KKFG+ 
Sbjct: 181 GLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN 240
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           +F+NP    DK + +VI ++TDGG DY FECIG  SVM  A     +GWG +VI+GV   
Sbjct: 241 EFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 299
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           G  IS    +++ GR   GT FGG K R+ +  L +KY++K
Sbjct: 300 GQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNK 340

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/350 (40%), Positives = 187/350 (53%), Gaps = 11/350 (3%)
Query: 5   SASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSST 64
           S+S   G+VI CKAA+   P KPL          +A E+R+K+L T+LCH+D   W  S 
Sbjct: 16  SSSATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTW--SG 73
Query: 65  DLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF 124
             P+   P +                      D V+P +  +C EC+ CKS K+N C K 
Sbjct: 74  KDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 133
Query: 125 ----GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
               G G    M  D  SRF  + G  I+HF+  S+F++Y+VV    V KI P  PL   
Sbjct: 134 RAATGVGV---MMNDRKSRF-SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKV 189
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKF 240
           CLL CGV TG+GA W  A VE GS VA+F             +   AS+IIG+DI+ +KF
Sbjct: 190 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKF 249
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
           +  K FG+T+FINP    ++ + QVI ++TDGG DY FECIG  SVM  A     +GWG 
Sbjct: 250 DRAKNFGVTEFINPKE-HEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 308
Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           +VI+GV   G  IS    +++ GR   GT FGG K RS + +L  KYL K
Sbjct: 309 SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKK 358

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/341 (37%), Positives = 179/341 (52%), Gaps = 7/341 (2%)
Query: 11  GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           GKVI+CKAA+     KPL           A EIRIKI+ T +CH+D+          K  
Sbjct: 4   GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDG 61
Query: 71  LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
            PV+                      + V+P+F   CGECR C+S K+N C K      P
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121
Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
           ++     +RF   KG  +  FL  S+F++Y+VV+   V KI P  PL   CLL CGVSTG
Sbjct: 122 DVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 191 VGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITD 250
            GAA   A VE GST A+F                 A +II VD+NP+KFE  K FG TD
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG-VEMH 309
           F+NP     + +SQV+ +MT+GG D+  EC+G   VM +A  S  +GWG +V++G  ++H
Sbjct: 241 FVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH 299
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              ++   I+++ GR+  G+ FGG K +  +  + + YLDK
Sbjct: 300 --DVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  215 bits (547), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 184/345 (53%), Gaps = 12/345 (3%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           A +VI+CKAA+    GKPL          KA E+RIKI+ T++CH+D  +  S  D P+ 
Sbjct: 2   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEG 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
             PVI                      D V+P++   CGEC+ C + K+N C K     G
Sbjct: 60  CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
           +G  P    DGTSRF   KG  I H++  S+F+EY+VV    V KI P  PL   CLL C
Sbjct: 120 KGLMP----DGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGC 174
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
           G+STG GAA   A +E GS  A+F             ++  AS+IIGVDIN +KF   K+
Sbjct: 175 GISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 234
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           FG T+ INP     K + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++G
Sbjct: 235 FGATECINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 293
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           V   G  I+    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct: 294 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  215 bits (547), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 184/345 (53%), Gaps = 12/345 (3%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           A +VI+CKAA+    GKPL          KA E+RIKI+ T++CH+D  +  S  D P+ 
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEG 58
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
             PVI                      D V+P++   CGEC+ C + K+N C K     G
Sbjct: 59  CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 118
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
           +G  P    DGTSRF   KG  I H++  S+F+EY+VV    V KI P  PL   CLL C
Sbjct: 119 KGLMP----DGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGC 173
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
           G+STG GAA   A +E GS  A+F             ++  AS+IIGVDIN +KF   K+
Sbjct: 174 GISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           FG T+ INP     K + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++G
Sbjct: 234 FGATECINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 292
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           V   G  I+    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct: 293 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  215 bits (547), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 184/345 (53%), Gaps = 12/345 (3%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           A +VI+CKAA+    GKPL          KA E+RIKI+ T++CH+D  +  S  D P+ 
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEG 58
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
             PVI                      D V+P++   CGEC+ C + K+N C K     G
Sbjct: 59  CFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 118
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
           +G  P    DGTSRF   KG  I H++  S+F+EY+VV    V KI P  PL   CLL C
Sbjct: 119 KGLMP----DGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGC 173
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
           G+STG GAA   A +E GS  A+F             ++  AS+IIGVDIN +KF   K+
Sbjct: 174 GISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           FG T+ INP     K + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++G
Sbjct: 234 FGATECINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 292
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           V   G  I+    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct: 293 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  214 bits (546), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 184/345 (53%), Gaps = 12/345 (3%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           A +VI+CKAA+    GKPL          KA E+RIKI+ T++CH+D  +  S  D P+ 
Sbjct: 2   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEG 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
             PVI                      D V+P++   CGEC+ C + K+N C K     G
Sbjct: 60  CFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
           +G  P    DGTSRF   KG  I H++  S+F+EY+VV    V KI P  PL   CLL C
Sbjct: 120 KGLMP----DGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGC 174
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
           G+STG GAA   A +E GS  A+F             ++  AS+IIGVDIN +KF   K+
Sbjct: 175 GISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 234
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           FG T+ INP     K + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++G
Sbjct: 235 FGATECINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 293
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           V   G  I+    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct: 294 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA+E+RIK++   +CH+D      +      
Sbjct: 3   AGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK+ +SN C K   G  
Sbjct: 60  PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGT RF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A  VA V  GST A+F             +   A++II VDIN +KF   K+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV   
Sbjct: 239 ECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPA 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  +GG K +  I  L   ++ K
Sbjct: 298 SQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  205 bits (522), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  205 bits (521), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++   +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK+ +SN C K   G  
Sbjct: 60  PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGT RF    G  IHHF+ +S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTLQDGTRRFT-CSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++II VDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV   
Sbjct: 239 ECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAK 338

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  205 bits (521), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  204 bits (520), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN ++F   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAK 338

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  204 bits (518), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P++   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA+E+RIK++   +C +D      +      
Sbjct: 3   AGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK+ +SN C K   G  
Sbjct: 60  PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGT RF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A  VA V  GST A+F             +   A++II VDIN +KF   K+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV   
Sbjct: 239 ECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPA 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  +GG K +  I  L   ++ K
Sbjct: 298 SQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  203 bits (517), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA+E+RIK++   +C +D      +      
Sbjct: 3   AGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK+ +SN C K   G  
Sbjct: 60  PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGT RF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A  VA V  GST A+F             +   A++II VDIN +KF   K+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV   
Sbjct: 239 ECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPA 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  +GG K +  I  L   ++ K
Sbjct: 298 SQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+ V   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA+E+RIK++   +C +D      +      
Sbjct: 3   AGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+CR CK+ +SN C K   G  
Sbjct: 60  PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGT RF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A  VA V  GST A+F             +   A++II VDIN +KF   K+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV   
Sbjct: 239 ECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPA 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  +GG K +  I  L   ++ K
Sbjct: 298 SQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P++   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  202 bits (513), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 172/341 (50%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++ T +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+    CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  200 bits (509), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 173/341 (50%), Gaps = 6/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++   +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL---VA 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+C  CK  + N C K     R
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPR 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             M +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 GTM-QDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFST 177
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 178 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 237
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 238 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPD 296
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 297 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  200 bits (509), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 173/341 (50%), Gaps = 6/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++   +C SD      +      
Sbjct: 3   AGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL---VA 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+F   CG+C  CK  + N C K     R
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPR 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             M +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 GTM-QDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFST 177
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+F             +   A++IIGVDIN +KF   K+ G T
Sbjct: 178 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 237
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 238 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPD 296
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 297 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  194 bits (493), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/344 (36%), Positives = 167/344 (48%), Gaps = 8/344 (2%)
Query: 11  GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           GKVI+CKAAI    GKPL          KA E+RI+I+ TSLCH+D T   S      L 
Sbjct: 6   GKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSK--FEGLA 63
Query: 71  LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
            PVI                      D V+P++   C +C+ C S  +N C K      P
Sbjct: 64  FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 131 ----NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
                +  D TSRF   KG  ++HF   S+F++Y+VV   ++ KI     L   CLL CG
Sbjct: 124 ASDQQLMEDKTSRFT-CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCG 182
Query: 187 VSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKF 246
            STG GAA   A V  GST A+F             +   AS+IIG+DIN EKF   K  
Sbjct: 183 FSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKAL 242
Query: 247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
           G TD +NP     K + +VI E+T GG D+  +C G +  M  A + +  GWG    +GV
Sbjct: 243 GATDCLNPRDL-HKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGV 301
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
                 +++   E++ GR++ GT+FGG K    I  L   Y +K
Sbjct: 302 AAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNK 345

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  193 bits (491), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 168/341 (49%), Gaps = 5/341 (1%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP           KA E+RIK++   +C +D      +      
Sbjct: 3   AGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM---VT 59
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI                      D V+P+    CG+CR CK+ +SN C K      
Sbjct: 60  PLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +   IHHFL IS+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 QGTLQDGTSRFT-CRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A  VA V  GST A+F             +   A++II VDIN +KF   K+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV   
Sbjct: 239 ECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G   GG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAK 338

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 173/345 (50%), Gaps = 13/345 (3%)
Query: 11  GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           GKVI+CKAAI    G PL          KA E+RI+++ T +CH+D+    ++TD  K  
Sbjct: 4   GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDI----NATDPKKKA 59
Query: 71  L-PVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           L PV+                      D V+P F   C  C+ C S  +N C K      
Sbjct: 60  LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119
Query: 130 PNMPR----DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
           P + +    D TSRF   KG  I+HF+ +SSF++Y+VV   ++ ++     L   CL+ C
Sbjct: 120 PTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGC 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
           G S+G GAA   A V  GST A+F             ++  AS+II +DIN EKF   K 
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
            G TD +NP    DK V  VI E+T GG DY  +C G    +  A + +  GWG   ++G
Sbjct: 239 LGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
            ++    +++ +++++ GRS+ GT+FGG K    +  L   Y +K
Sbjct: 298 AKVD--EMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/344 (36%), Positives = 168/344 (48%), Gaps = 12/344 (3%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     +P           K  E+RIKIL T +C +D    K  T + K 
Sbjct: 3   AGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKG-TMVSKF 61
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSK---FGR 126
           P  VI                      D V+P+F   C EC  C++   N C +    GR
Sbjct: 62  P--VIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGR 119
Query: 127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
           G       DGT+RF   KG  +HHFLN S+FTEY+VVD + V KI    P    CL+ CG
Sbjct: 120 GVL----ADGTTRFT-CKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCG 174
Query: 187 VSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKF 246
            STG GAA K   V+ GST  +F             +   AS+IIG+D+N +KFE     
Sbjct: 175 FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 234
Query: 247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
           G T+ I+P     K +S+V+ EMT     Y FE IG    M DA  S    +G +V++GV
Sbjct: 235 GATECISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGV 293
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
                 ++ + + +  GR+  G  FGGLK R D+  L  ++L K
Sbjct: 294 PPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 172/341 (50%), Gaps = 7/341 (2%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGK I CKAA+   P KPL          KA E+RIKIL + +C SD +  K   ++   
Sbjct: 4   AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK---EIIPS 60
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PVI                      D V+P+F   CG CR CKSS SN C K   G +
Sbjct: 61  KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             +  D TSRF   +G  I++ +  S+FTEY+VV    V KI P  PL  +CL+ CG +T
Sbjct: 121 TGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFAT 178
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
           G GAA   A V  GST A+F             +   AS+IIGV  + +KF    + G T
Sbjct: 179 GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP    DK + +VI E T+GG DY  EC G    M +A  S+  G G TV+LG+   
Sbjct: 239 ECLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              + L+ + +L GRS+ G+ FGG K   +++ L   Y+ K
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 337

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  186 bits (472), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/344 (36%), Positives = 168/344 (48%), Gaps = 12/344 (3%)
Query: 10  AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     +P           K  E+RIKIL T +C +D    K  T + K 
Sbjct: 3   AGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKG-TMVSKF 61
Query: 70  PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSK---FGR 126
           P  VI                      D V+P+F   C EC  C++   N C +    GR
Sbjct: 62  P--VIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGR 119
Query: 127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
           G       DGT+RF   KG  +HHF+N S+FTEY+VVD + V KI    P    CL+ CG
Sbjct: 120 GVL----ADGTTRFT-CKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCG 174
Query: 187 VSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKF 246
            STG GAA K   V+ GST  +F             +   AS+IIG+D+N +KFE     
Sbjct: 175 FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 234
Query: 247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
           G T+ I+P     K +S+V+ EMT     Y FE IG    M DA  S    +G +V++GV
Sbjct: 235 GATECISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGV 293
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
                 ++ + + +  GR+  G  FGGLK R D+  L  ++L K
Sbjct: 294 PPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  185 bits (470), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/345 (33%), Positives = 172/345 (49%), Gaps = 13/345 (3%)
Query: 11  GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
           GKVI+CKAAI    G PL          KA E+RI+++ T +C +D+    ++TD  K  
Sbjct: 4   GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDI----NATDPKKKA 59
Query: 71  L-PVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           L PV+                      D V+P F   C  C+ C S  +N C K      
Sbjct: 60  LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119
Query: 130 PNMPR----DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
           P + +    D TSRF   KG  I+HF+ +SSF++Y+VV   ++ ++     L   CL+ C
Sbjct: 120 PTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGC 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
           G S+G GAA   A V  GST A+F             ++  AS+II +DIN EKF   K 
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
            G TD +NP    DK V  VI E+T GG DY  +C G    +  A + +  GWG   ++G
Sbjct: 239 LGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
            ++    +++ +++++ GRS+ GT+FGG K    +  L   Y +K
Sbjct: 298 AKVD--EMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 128/308 (41%), Gaps = 10/308 (3%)
Query: 42  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 101
           E+ +K++ T +CH+D+           +PLP +                      D V+ 
Sbjct: 33  EVLVKVVATGMCHTDLIVRDQKY---PVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV- 88
Query: 102 IFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160
           + +  CG+C  C +     CS+F GR +         +     +G V  HF   SSF  Y
Sbjct: 89  LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATY 148
Query: 161 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXX 220
           ++    + VK+T  +P+ +   L CG+ TG GA      V   S+   +           
Sbjct: 149 ALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALL 208
Query: 221 XXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280
             ++  AS II VDI   + E+ K+ G T  IN  T   +     IKE+TDGG ++  E 
Sbjct: 209 AAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT---QDPVAAIKEITDGGVNFALES 265
Query: 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSD 339
            G   ++    ++     GK  ++G    G+    +  + +L G+++ G   G   P+  
Sbjct: 266 TGSPEILKQGVDALGI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKF 324
Query: 340 IATLAQKY 347
           I  L + Y
Sbjct: 325 IPELVRLY 332

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 108/306 (35%), Gaps = 47/306 (15%)
Query: 17  KAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIF 75
           KAA+ R  GKPL             +I++ I  + +CH+D     +  D P  P  P I 
Sbjct: 27  KAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTD--LHAAEGDWPVKPNPPFIP 84
Query: 76  XXXXXXXXXXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMP 133
                                D V +P  +  CG CR C       C  +   GY  N  
Sbjct: 85  GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVN-- 142
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG-IACLLSCGVSTGVG 192
                                  F EY V D   V  +  +I    IA +L  GV+  V 
Sbjct: 143 ---------------------GGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT--VY 179
Query: 193 AAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFI 252
              KV   + G  V I              R      +  VDI+  K ++ ++ G T  +
Sbjct: 180 KGLKVTDTKPGDWVVISGIGGLGHMAVQYARA-MGLNVAAVDIDDRKLDLARRLGATVTV 238
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
           N  T  D   +  I++ TDGGA    + + +T+V   AF  +         LG+   G  
Sbjct: 239 NAKTVADP--AAYIRKETDGGA----QGVLVTAVSPKAFEQA---------LGMVARGGT 283
Query: 313 ISLNSI 318
           +SLN +
Sbjct: 284 VSLNGL 289

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 118/334 (35%), Gaps = 38/334 (11%)
Query: 17  KAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIF 75
           KAA+     +PL             E+ ++I    +CH+D     +  D P  P LP+I 
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTD--LHAAHGDWPVKPKLPLIP 59
Query: 76  XXXXXXXXXXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTCS-KFGRGYRPNMP 133
                                D V +P  +  CG C  C S +   C  +   GY  +  
Sbjct: 60  GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-- 117
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVG 192
                                  + EY      +VVKI  ++    A  + C GV+T   
Sbjct: 118 ---------------------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY-- 154
Query: 193 AAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFI 252
            A KV G + G  VAI+             +      ++ VDI  EK E+ K+ G    +
Sbjct: 155 KALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVV 213
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
           NP     +  ++ +KE   GG                A+NS R G G  V++G+     P
Sbjct: 214 NPLK---EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMP 268
Query: 313 ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK 346
           I +    +L G  + G+  G  K   +    A +
Sbjct: 269 IPIFDT-VLNGIKIIGSIVGTRKDLQEALQFAAE 301

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 118/334 (35%), Gaps = 38/334 (11%)
Query: 17  KAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIF 75
           KAA+     +PL             E+ ++I    +CH+D     +  D P  P LP+I 
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTD--LHAAHGDWPVKPKLPLIP 59
Query: 76  XXXXXXXXXXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTCS-KFGRGYRPNMP 133
                                D V +P  +  CG C  C S +   C  +   GY  +  
Sbjct: 60  GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-- 117
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVG 192
                                  + EY      +VVKI  ++    A  + C GV+T   
Sbjct: 118 ---------------------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY-- 154
Query: 193 AAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFI 252
            A KV G + G  VAI+             +      ++ VDI  EK E+ K+ G    +
Sbjct: 155 KALKVTGAKPGEWVAIYGIGGFGHVAVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVV 213
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
           NP     +  ++ +KE   GG                A+NS R G G  V++G+     P
Sbjct: 214 NPLK---EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMP 268
Query: 313 ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK 346
           I +    +L G  + G+  G  K   +    A +
Sbjct: 269 IPIFDT-VLNGIKIIGSIVGTRKDLQEALQFAAE 301

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/317 (20%), Positives = 112/317 (35%), Gaps = 27/317 (8%)
Query: 42  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 101
           EI +K+    LCHSD+             LP+                       D V  
Sbjct: 27  EILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAV 86
Query: 102 IFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160
                CG C  C   + N C++    G  P  P  G+                  S  EY
Sbjct: 87  YGPWGCGACHACARGRENYCTRAADLGITP--PGLGSP----------------GSMAEY 128
Query: 161 SVVD-ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXX 219
            +VD   H+V I    P+  A L   G++     +  +  +  GST  +           
Sbjct: 129 MIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGI 188
Query: 220 XXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF 278
              R   A+++I VD++ ++  + ++ G     + A       +  I+E+T G GA   F
Sbjct: 189 QILRAVSAARVIAVDLDDDRLALAREVG----ADAAVKSGAGAADAIRELTGGQGATAVF 244
Query: 279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS 338
           + +G  S ++ A        G   ++G+   G+   +    I  G SV   Y+G      
Sbjct: 245 DFVGAQSTIDTAQQVVAVD-GHISVVGIHA-GAHAKVGFFMIPFGASVVTPYWGTRSELM 302
Query: 339 DIATLAQKYLDKVHLRS 355
           ++  LA+     +H  +
Sbjct: 303 EVVALARAGRLDIHTET 319

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 139 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 198
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 199 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258
            +E+GS+V +              +L  A +IIGV   P   E  K +G TD +N     
Sbjct: 163 DIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN-- 220
Query: 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
              V QV+K     G D      G +  ++ A    + G    +I  +  HGS  +L
Sbjct: 221 GHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDAL 274

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 114/297 (38%), Gaps = 25/297 (8%)
Query: 43  IRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLV--- 99
           I ++IL   +C SDV  ++     P++PLP+I                       L    
Sbjct: 45  ILVEILSAGVCGSDVHMFRGED--PRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGD 102
Query: 100 LPIFHR--DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 157
           L +++R   CGEC  CK SK        + Y  N    G S +  L+G           +
Sbjct: 103 LIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINR---GCSEYPHLRG----------CY 149
Query: 158 TEYSVVD-ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXX 216
           + + V+D  T V+K++    L +  +  C  +T   A  +      G TV I        
Sbjct: 150 SSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGL 209
Query: 217 XXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GAD 275
                 R   A  +I +  +P + ++ ++ G    +N      +   + I ++T G GAD
Sbjct: 210 FGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGAD 269
Query: 276 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTY 330
           +  E  G +  + +     R G G   + GV +   P+     E  +LK  +  G +
Sbjct: 270 FILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIW 325

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 37/221 (16%)
Query: 107 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166
           CG C  C++ + N C                   R L+   IH       F EY +V   
Sbjct: 111 CGRCPQCQAGRVNLC-------------------RNLRAIGIHRD---GGFAEYVLVPRK 148
Query: 167 HVVKITPHI-PL-GIACL-LSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXR 223
              +I   + P+ G  C  L+C +         ++G++ GSTVAI              R
Sbjct: 149 QAFEIPLTLDPVHGAFCEPLACCLH-----GVDLSGIKAGSTVAILGGGVIGLLTVQLAR 203
Query: 224 LNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIK---EMTDGGADYCFEC 280
           L  A+ +I       K  + ++ G T  ++P + GD  V + I     +  GG D   EC
Sbjct: 204 LAGATTVILSTRQATKRRLAEEVGATATVDP-SAGD--VVEAIAGPVGLVPGGVDVVIEC 260
Query: 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL 321
            G+   +  +   ++ G G  VILGV   G  + +   +IL
Sbjct: 261 AGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDIL 300

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 139 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 198
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 199 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258
            +++GS+V +              +L  A +IIGV   P   E  K +G TD +N     
Sbjct: 163 DIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN-- 220
Query: 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
              V QV+K     G D      G +  ++ A +  + G    +I  +  HGS  +L
Sbjct: 221 GHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDAL 274

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Query: 139 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 198
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 199 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258
            +E+G+TVA+              +L  A +II V   P   +  K +G TD +N     
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YK 219
Query: 259 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREG 297
           D  +   I  +T+G G D      G   +M  A    + G
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG 259

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Query: 139 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 198
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 199 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258
            +E+G+TVA+              +L  A +II V   P   +  K +G TD +N     
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YK 219
Query: 259 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREG 297
           D  +   I  +T+G G D      G   +M  A    + G
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG 259

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 157 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 214
           F EY  V D    + I P  +PL  A +++  ++TG   A ++A +++GS+V +      
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 215 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274
                   +L  A +IIGV   P   E  K +G TD +N        V QV+K     G 
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIVDQVMKLTNGKGV 236
Query: 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
           D      G +  ++ A +  + G    +I  +  HGS  +L
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDAL 274

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 157 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 214
           F EY  V D    + I P  +PL  A +++  ++TG   A ++A +++GS+V +      
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 215 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274
                   +L  A +IIGV   P   E  K +G TD +N        V QV+K     G 
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIVDQVMKLTNGKGV 236
Query: 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
           D      G +  ++ A +  + G    +I  +  HGS  +L
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDAL 274

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 123/341 (36%), Gaps = 53/341 (15%)
Query: 17  KAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIF 75
           KAA+    G PL             ++ +KI  + +CH+D     +  D P K PLP I 
Sbjct: 8   KAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTD--LHAAEGDWPVKPPLPFIP 65
Query: 76  XXXXXXXXXXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMP 133
                                D V +P  +  CG C  C +     C S+   GY  N  
Sbjct: 66  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVN-- 123
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG-IACLLSCGVSTGVG 192
                                  + EY + D  +V  +  ++    IA +L  GV+   G
Sbjct: 124 ---------------------GGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKG 162
Query: 193 AAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFI 252
              K      G  VAI              R      +  +DI+  K E+ +K G +  +
Sbjct: 163 --LKQTNARPGQWVAISGIGGLGHVAVQYAR-AMGLHVAAIDIDDAKLELARKLGASLTV 219
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNS----SREGWGKTVILGVEM 308
           N     +  V  + +++  GGA        +T+V N AF      +R G G   ++G+  
Sbjct: 220 NARQ--EDPVEAIQRDI--GGAHGVL----VTAVSNSAFGQAIGMARRG-GTIALVGLPP 270
Query: 309 HGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD 349
              P  +  + +LKG  + G+  G    R+D+    Q+ LD
Sbjct: 271 GDFPTPIFDV-VLKGLHIAGSIVG---TRADL----QEALD 303

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 157 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 214
           F EY  V D    + I P  +PL  A +++  ++TG   A ++A +E+GS+V +      
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAV 178
Query: 215 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274
                   +L  A +IIGV   P   E  K +G TD +N          QV+K     G 
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIEDQVMKLTNGKGV 236
Query: 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
           D      G +  ++ A    + G    +I  +  HGS  +L
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDAL 274

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	373
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-175
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-172
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-171
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-171
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-169
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-137
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-119
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-68
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-59
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	9e-58
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-57
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	2e-56
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	4e-56
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	6e-55
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-54
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-51
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	2e-50
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	2e-50
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	5e-47
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-46
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-45
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	3e-45
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	9e-45
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-44
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-42
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-34
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	1e-33
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	9e-28
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-25
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-22
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-19
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	5e-19
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-18
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-18
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-17
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-17
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-16
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	6e-16
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	7e-16
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-15
4eye_A	342	Probable oxidoreductase; structural genomics, niai	5e-13
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-12
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-11
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-11
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-11
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	5e-11
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-10
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-09
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-09
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	7e-09
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-08
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-08
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	9e-08
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-05
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-05
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	6e-05
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-05
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	4e-04
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	5e-04
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	7e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  492 bits (1268), Expect = e-175
 Identities = 161/341 (47%), Positives = 210/341 (61%), Gaps = 4/341 (1%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           A +VI+CKAA+    GKPL IEEIEV PPKA E+RIKI+ T++CH+D      S   P+ 
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTL--SGADPEG 58

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PVI GH   G+VESVGE V ++K  D V+P++   CGEC+ C + K+N C K      
Sbjct: 59  CFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 118

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             +  DGTSRF   KG  I H++  S+F+EY+VV    V KI P  PL   CLL CG+ST
Sbjct: 119 KGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G GAA   A +E GS  A+FGLG VGLAV  G ++  AS+IIGVDIN +KF   K+FG T
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + INP     K + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++GV   
Sbjct: 238 ECINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS 296

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           G  I+    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct: 297 GEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  483 bits (1245), Expect = e-172
 Identities = 140/345 (40%), Positives = 192/345 (55%), Gaps = 11/345 (3%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
            GKVI+CKAAI    G PL IEEIEV PPKA E+RI+++ T +C +D+          K 
Sbjct: 3   QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK---KKA 59

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PV+ GHE  G+VESVG  V   K  D V+P F   C  C+ C S  +N C K      
Sbjct: 60  LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119

Query: 130 PN----MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
           P     +  D TSRF   KG  I+HF+ +SSF++Y+VV   ++ ++     L   CL+ C
Sbjct: 120 PTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGC 178

Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
           G S+G GAA   A V  GST A+FGLG VGL+   G ++  AS+II +DIN EKF   K 
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238

Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
            G TD +NP    DK V  VI E+T GG DY  +C G    +  A + +  GWG   ++G
Sbjct: 239 LGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297

Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
                  +++ +++++ GRS+ GT+FGG K    +  L   Y +K
Sbjct: 298 A--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  481 bits (1240), Expect = e-171
 Identities = 152/341 (44%), Positives = 199/341 (58%), Gaps = 7/341 (2%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGK I CKAA+   P KPL +E I V PPKA E+RIKIL + +C SD +       +P  
Sbjct: 4   AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVL--KEIIPS- 60

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PVI GHEAVGVVES+G  V  VK  D V+P+F   CG CR CKSS SN C K   G +
Sbjct: 61  KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             +  D TSRF   +G  I++ +  S+FTEY+VV    V KI P  PL  +CL+ CG +T
Sbjct: 121 TGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFAT 178

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G GAA   A V  GST A+FGLG VG +   G +   AS+IIGV  + +KF    + G T
Sbjct: 179 GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 238

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP    DK + +VI E T+GG DY  EC G    M +A  S+  G G TV+LG+   
Sbjct: 239 ECLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 297

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              + L+ + +L GRS+ G+ FGG K   +++ L   Y+ K
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 337

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  480 bits (1239), Expect = e-171
 Identities = 155/341 (45%), Positives = 207/341 (60%), Gaps = 5/341 (1%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
            GKVI+CKAA+     KPLVIEEIEV+ P A EIRIKI+ T +CH+D+          K 
Sbjct: 3   VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHL--FEGKHKD 60

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PV+ GHE  G+VESVG  V E +  + V+P+F   CGECR C+S K+N C K      
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
           P++     +RF   KG  +  FL  S+F++Y+VV+   V KI P  PL   CLL CGVST
Sbjct: 121 PDVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVST 179

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G GAA   A VE GST A+FGLGAVGLA   G     A +II VD+NP+KFE  K FG T
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           DF+NP     + +SQV+ +MT+GG D+  EC+G   VM +A  S  +GWG +V++G    
Sbjct: 240 DFVNPNDH-SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW-TD 297

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              ++   I+++ GR+  G+ FGG K +  +  + + YLDK
Sbjct: 298 LHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  477 bits (1229), Expect = e-169
 Identities = 155/341 (45%), Positives = 206/341 (60%), Gaps = 5/341 (1%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP  IEE+EV PPKA E+RIK++ T +C SD      S  L   
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVV--SGTLVT- 59

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
           PLPVI GHEA G+VES+GE V  V+  D V+P+F   CG+CR CK  + N C K      
Sbjct: 60  PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
               +DGTSRF   +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           G G+A KVA V  GST A+FGLG VGL+V  G +   A++IIGVDIN +KF   K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           + +NP     K + +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV   
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297

Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  395 bits (1018), Expect = e-137
 Identities = 95/345 (27%), Positives = 160/345 (46%), Gaps = 18/345 (5%)

Query: 12  KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL 71
           ++    AA+    G    ++ +++  P+  E+ +K++ T +CH+D+         P  PL
Sbjct: 3   ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVR--DQKYPV-PL 59

Query: 72  PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRG 127
           P + GHE  G++E++G  V E++  D V+  +   CG+C  C +     CS+F      G
Sbjct: 60  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSG 118

Query: 128 YRPNMPRDGTSRFREL-KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
                  +G        +G V  HF   SSF  Y++    + VK+T  +P+ +   L CG
Sbjct: 119 ADS----EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCG 174

Query: 187 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
           + TG GA      V   S+   +G GAVGL+    A++  AS II VDI   + E+ K+ 
Sbjct: 175 IQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234

Query: 247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
           G T  IN      +     IKE+TDGG ++  E  G   ++    ++     GK  ++G 
Sbjct: 235 GATHVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGA 290

Query: 307 EMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
              G+    +  ++L  G+++ G   G   P+  I  L + Y   
Sbjct: 291 PQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQG 335

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  348 bits (896), Expect = e-119
 Identities = 85/346 (24%), Positives = 141/346 (40%), Gaps = 28/346 (8%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           ++  A +     +PLV +E E+       I ++IL   +C SDV  ++   + P++PLP+
Sbjct: 16  LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRG--EDPRVPLPI 73

Query: 74  IFGHEAVGVVESVGEYV-----EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY 128
           I GHE  G V  V         E +K  DL++      CGEC  CK SK        + Y
Sbjct: 74  ILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY 133

Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGV 187
             N    G S +  L+G           ++ + V+D  T V+K++    L +  +  C  
Sbjct: 134 GIN---RGCSEYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSG 180

Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
           +T   A  +      G TV I G G +GL     AR   A  +I +  +P + ++ ++ G
Sbjct: 181 ATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG 240

Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
               +N      +   + I ++T G GAD+  E  G +  + +     R G G   + GV
Sbjct: 241 ADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGV 299

Query: 307 EMHGSPISLNSIE--ILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
            +   P+     E  +LK  +  G +       S            
Sbjct: 300 AVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSITSRN 342

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  218 bits (557), Expect = 2e-68
 Identities = 75/331 (22%), Positives = 125/331 (37%), Gaps = 32/331 (9%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA      G   V+ +I    P   EI +K+    LCHSD+             LP+  G
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC--SKFGRGYRPNMPR 134
           HE VG V  +GE V      D V       CG C  C   + N C  +       P +  
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGS 121

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGIACLLSCGVSTGVGA 193
            G+                     EY +VD    +     + P+  A L   G++     
Sbjct: 122 PGS-------------------MAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAI 162

Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
           +  +  +  GST  + G+G +G    +  R   A+++I VD++ ++  + ++ G    + 
Sbjct: 163 SRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK 222

Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
                    +  I+E+T G GA   F+ +G  S ++ A        G   ++G+      
Sbjct: 223 S----GAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHA 277

Query: 313 ISLNSIEILKGRSVCGTYFGGLKPRSDIATL 343
                + I  G SV   Y+G    RS++  +
Sbjct: 278 KVGFFM-IPFGASVVTPYWG---TRSELMEV 304

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  194 bits (495), Expect = 5e-59
 Identities = 71/337 (21%), Positives = 132/337 (39%), Gaps = 45/337 (13%)

Query: 17  KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVI 74
           KAA      KPL IE+++       +++ ++I    +CH+D+   +    +L +  LP  
Sbjct: 17  KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMP 133
            GHE VG +E V E VE +++ D V+       G C  C++ +   C      G      
Sbjct: 77  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN---- 132

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI---ACLLSCGVSTG 190
            DG                    F E+       V+K+   I          L+    T 
Sbjct: 133 IDGG-------------------FAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITA 173

Query: 191 VGAAWKVAGVEV--GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
             A  K A   +  G+ VAI G+G +G    +  ++   + +I +D+  EK ++ ++ G 
Sbjct: 174 YRAV-KKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA 232

Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
              ++      +   + + E+T G G +   + +G  + ++          G+ +I+G  
Sbjct: 233 DHVVDA----RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGY- 286

Query: 308 MHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIATL 343
             G  +   +I  I    S  G+  G      ++  L
Sbjct: 287 --GGELRFPTIRVISSEVSFEGSLVG---NYVELHEL 318

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  190 bits (485), Expect = 9e-58
 Identities = 83/324 (25%), Positives = 132/324 (40%), Gaps = 47/324 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIF 75
            A +   PG    + E++V  P   E+ IK+L TS+C +D+  ++ +     ++  P I 
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM--- 132
           GHE  G V  +G  VE ++  D V    H  CG+C  C+  + + C         N    
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVC--------QNTKIF 117

Query: 133 --PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV 187
               DG                    F EY+VV   ++ K    IP   A L   L   V
Sbjct: 118 GVDTDGV-------------------FAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV 158

Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
            T       +AG   G +V I G G +GL     A+ + A  +I  + +  + E+ KK G
Sbjct: 159 DT------VLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG 212

Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
               INP    ++ V + + ++TDG G D   E  G    +     +     G+  +LG+
Sbjct: 213 ADYVINPF---EEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 268

Query: 307 EMHGSPISLNSIEILKGRSVCGTY 330
                 I  N++ I K  ++ G  
Sbjct: 269 YPGKVTIDFNNLIIFKALTIYGIT 292

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  190 bits (485), Expect = 2e-57
 Identities = 72/322 (22%), Positives = 121/322 (37%), Gaps = 44/322 (13%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA      G  + +  + +  P   ++ +K+    +C +D               PV  G
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PVTLG 80

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRD 135
           HE  G+V   G  V ++     +    +  CG C  C++ + N C      G      RD
Sbjct: 81  HEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI----HRD 136

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVG 192
           G                    F EY +V      +I   +          L+C +     
Sbjct: 137 G-------------------GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL----- 172

Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
               ++G++ GSTVAI G G +GL   + ARL  A+ +I       K  + ++ G T  +
Sbjct: 173 HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV 232

Query: 253 NPATCGDKTVSQVIKEMTDG---GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
           +P+      V + I         G D   EC G+   +  +   ++ G G  VILGV   
Sbjct: 233 DPS---AGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQ 288

Query: 310 GSPISLNSIEIL-KGRSVCGTY 330
           G  + +   +IL +   V G++
Sbjct: 289 GEKVEIEPFDILFRELRVLGSF 310

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  187 bits (476), Expect = 2e-56
 Identities = 71/323 (21%), Positives = 119/323 (36%), Gaps = 46/323 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIF 75
           +A     P + L + +  V  P   EI +++   S+C +D+  WK        +  P++ 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM--- 132
           GHE  GVVE+VG  V   +  D V    H  C  C  C++   + C         N    
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVC--------LNTQIL 113

Query: 133 --PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV 187
              RDG                    F EY VV   +       +P  +A +       V
Sbjct: 114 GVDRDGG-------------------FAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV 154

Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
                          G +V I G G +GL  A   R + A  I+  D NP +    + + 
Sbjct: 155 -----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA 209

Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
               +NP    ++ + +V++ +T  G +   E  G  + ++    +   G G+  ILG+ 
Sbjct: 210 -DRLVNPL---EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIP 264

Query: 308 MHGSPISLNSIEILKGRSVCGTY 330
                  L    +++G +  G  
Sbjct: 265 SDPIRFDLAGELVMRGITAFGIA 287

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  186 bits (474), Expect = 4e-56
 Identities = 68/331 (20%), Positives = 126/331 (38%), Gaps = 40/331 (12%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+ +   +PL IE++ +  P+  E+ I+I    +C +D+  WK         LP+I G
Sbjct: 5   KAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILG 64

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRD 135
           HE  G +  VGE + +VK+ D V+         CR C+  K N C      G       +
Sbjct: 65  HENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT----TN 119

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA-- 193
           G                    F+EY +V  +  +     +    A  L+   +T +GA  
Sbjct: 120 G-------------------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIR 160

Query: 194 -AWKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251
            A           V + G+G +    +     L +   I+G+  + +  +   + G    
Sbjct: 161 QALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV 220

Query: 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
                   K    +I ++TDG GA    + +G      +      +  G  +++G+E   
Sbjct: 221 SEM-----KDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKR 274

Query: 311 SPISLNSIEILKGRSVCGTYFGGLKPRSDIA 341
             +       +  + + G+ +G     +D+ 
Sbjct: 275 VSLEAFDT-AVWNKKLLGSNYG---SLNDLE 301

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  183 bits (466), Expect = 6e-55
 Identities = 77/332 (23%), Positives = 126/332 (37%), Gaps = 41/332 (12%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK------SSTDLPKLP 70
           +A      GKPL ++EI V  PK  ++ IK+    +CHSDV   +         +   + 
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 71  LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYR 129
           LPV  GHE  G +E VG+ V    + DLV     +  G C  C+  + + C      G  
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
                DG                   ++ EY +V     +     +    A  L+C   T
Sbjct: 122 ----FDG-------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGIT 158

Query: 190 GVGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
              A  + A ++   T+ + G  G +G    + A+    + IIGVD+  E  E  K+ G 
Sbjct: 159 TYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217

Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
              IN +    +     I+ +T+  G D   +       ++    +  +  GK V++G+ 
Sbjct: 218 DYVINAS---MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLF 273

Query: 308 MHGSPISLNSIEILKGRSVCGTYFGGLKPRSD 339
                     I  L      G+  G    +SD
Sbjct: 274 GADLHYHAPLI-TLSEIQFVGSLVG---NQSD 301

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  181 bits (461), Expect = 4e-54
 Identities = 63/326 (19%), Positives = 117/326 (35%), Gaps = 52/326 (15%)

Query: 17  KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
           K+ +    G  + + E  + E     E+R+KI  + LC SD+     +        P+  
Sbjct: 2   KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKN---GAHYYPITL 57

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM--- 132
           GHE  G +++VG  V+++   D V  +    C  C +C     + C              
Sbjct: 58  GHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQC--------AKYDFI 109

Query: 133 --PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV 187
              RDG                    F EY VV   +V  +   +P+        ++ G+
Sbjct: 110 GSRRDGG-------------------FAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL 150

Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
                 A+ +A       V I G G +GL   + A    A  +  +DI+ EK  + K FG
Sbjct: 151 -----HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFG 205

Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
                N +   + +  Q+   + +        E  G+   +  A   +     +  ++G 
Sbjct: 206 AMQTFNSS---EMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGT 261

Query: 307 EMHGSPISLNSIE--ILKGRSVCGTY 330
                 ++  +    + K  +V G++
Sbjct: 262 LHQDLHLTSATFGKILRKELTVIGSW 287

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  176 bits (447), Expect = 1e-51
 Identities = 69/354 (19%), Positives = 110/354 (31%), Gaps = 60/354 (16%)

Query: 5   SASPKAGKVIRCKAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDV-----T 58
                 GK+    + + R P   + +EE+      K  EI IK+    +C SDV      
Sbjct: 21  GPKDIEGKLTWLGSKVWRYPE--VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTD 78

Query: 59  FWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER------DLVLPIFHRDCGECRD 112
                        PV  GHE  GVV   G      +        + V       CG CR 
Sbjct: 79  EEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRP 138

Query: 113 CKSSKSNTCSKF-GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171
           C     N C      G+      DG                    F EY  VD  +   +
Sbjct: 139 CAEGFPNHCENLNELGF----NVDGA-------------------FAEYVKVDAKYAWSL 175

Query: 172 -------TPHIPLGIACL---LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEG 221
                            L    S   +       +  G+  G  V I G G +GLA    
Sbjct: 176 RELEGVYEGDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAI 232

Query: 222 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280
            +   ASK+I  + +  +  + K+ G    I+P     +   + + + T+G GA    E 
Sbjct: 233 LKHAGASKVILSEPSEVRRNLAKELGADHVIDPT---KENFVEAVLDYTNGLGAKLFLEA 289

Query: 281 IGLTSVMNDAFNS----SREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330
            G+  ++          +R       I+       P++      ++   + G+ 
Sbjct: 290 TGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVF-QVRRAQIVGSQ 342

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  172 bits (437), Expect = 2e-50
 Identities = 67/343 (19%), Positives = 116/343 (33%), Gaps = 49/343 (14%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTF 59
           M + ++    G     +  +  I      +E ++     K  E+ + +  T +C SDV F
Sbjct: 1   MASSASKTNIGVFTNPQHDL-WISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHF 59

Query: 60  WKS-STDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS 118
           WK        +    + GHE+ G V +V   V+ +K  D V       C  C  C + + 
Sbjct: 60  WKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRY 119

Query: 119 NTCSKFGRGYRPNM------PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172
           N C          +      P  G                       Y         KI 
Sbjct: 120 NGC--------ERVDFLSTPPVPGL-------------------LRRYVNHPAVWCHKI- 151

Query: 173 PHIPLGIACL---LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229
            ++      +   LS  +     A  + AGV +G  V I G G +GL     A+   A  
Sbjct: 152 GNMSYENGAMLEPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACP 206

Query: 230 IIGVDINPEKFEIGKKFGITDFINPATCGD-KTVSQVIKEMTDG-GADYCFECIGLTSVM 287
           ++  DI+  + +  K+       +       +  ++ I E   G       EC G+ S +
Sbjct: 207 LVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSI 266

Query: 288 NDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330
             A  + + G GK  ++GV  +   I       ++   +   Y
Sbjct: 267 AAAIWAVKFG-GKVFVIGVGKNEIQIPFMRA-SVREVDLQFQY 307

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  172 bits (437), Expect = 2e-50
 Identities = 60/327 (18%), Positives = 122/327 (37%), Gaps = 51/327 (15%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIF 75
            + +   PG  L +E   +  P   E+ +++    +C SDV +W+        +  P++ 
Sbjct: 9   LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 76  GHEAVGVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM- 132
           GHEA G VE VG  V+ +K  D V   P           CK  + N          P++ 
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAP--RENDEFCKMGRYNLS--------PSIF 117

Query: 133 -----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LS 184
                P DG                       +   +     K+  ++      L   LS
Sbjct: 118 FCATPPDDGN-------------------LCRFYKHNAAFCYKLPDNVTFEEGALIEPLS 158

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
            G+      A +  GV +G  V + G G +G+     A+   A++++  D++  +    K
Sbjct: 159 VGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK 213

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
           + G    +  +    + +++ ++       +   EC G  + +     ++R G G  V++
Sbjct: 214 EIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLV 272

Query: 305 GVEMHGSPISLNSIEI-LKGRSVCGTY 330
           G  +     ++  +   ++   + G +
Sbjct: 273 G--LGSEMTTVPLLHAAIREVDIKGVF 297

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  162 bits (412), Expect = 5e-47
 Identities = 73/329 (22%), Positives = 133/329 (40%), Gaps = 54/329 (16%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIF 75
            +A+       L +E+  +  PK  E+ +++    +C SDV +++        +  P++ 
Sbjct: 6   LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 76  GHEAVGVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM- 132
           GHEA G V  VG+ V+ +K+ D V   P     C  C+ CK  K N C        P++ 
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLC--------PDLT 114

Query: 133 -----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LS 184
                P DG                       Y V       K+  ++ L    L   LS
Sbjct: 115 FCATPPDDGN-------------------LARYYVHAADFCHKLPDNVSLEEGALLEPLS 155

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
            GV      A + AGV++G+TV + G G +GL     A+   A  ++    +P + E+ K
Sbjct: 156 VGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAK 209

Query: 245 KFG--ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTV 302
             G  +T  ++PA   + ++ + I+       +   +C G    +    N +R G G  +
Sbjct: 210 NCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLM 268

Query: 303 ILGVEMHGSPISLNSIEI-LKGRSVCGTY 330
           ++G  M    +++  +    +   +   +
Sbjct: 269 LVG--MGSQMVTVPLVNACAREIDIKSVF 295

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  162 bits (411), Expect = 1e-46
 Identities = 61/333 (18%), Positives = 111/333 (33%), Gaps = 47/333 (14%)

Query: 17  KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLP 72
           KA I + P   + +++++  +     +I+I+ +   +C +D        + + LPK    
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 73  VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
           ++ GHEA+GVVE          + DLV+P+  R CG CR+C   + + C     G     
Sbjct: 62  LVLGHEAIGVVEES---YHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH 118

Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI--------PLGI---AC 181
             DG                      E+   D  ++VKI   I        PL     + 
Sbjct: 119 KMDGF-------------------MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159

Query: 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
                V   V       G      V + G G +G+      R       +     P + E
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVE 219

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGK 300
                                   +K+   G  D   +  G   +++ +         G 
Sbjct: 220 QTVIEETKTNYYN----SSNGYDKLKDSV-GKFDVIIDATGADVNILGNVIPLLGRN-GV 273

Query: 301 TVILGVEMHGS-PISLNSIE--ILKGRSVCGTY 330
             + G    GS P+   +++  +   +++ G  
Sbjct: 274 LGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLV 306

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  158 bits (402), Expect = 2e-45
 Identities = 87/329 (26%), Positives = 127/329 (38%), Gaps = 50/329 (15%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIF 75
           KAA+ R  G PL I+E+ V  P   ++++KI  + +CH+D+       D P  P LP I 
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADG--DWPVKPTLPFIP 61

Query: 76  GHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMP 133
           GHE VG V +VG  V  VKE D V +P  +  CG C  C       C K    GY     
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY----S 117

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVG 192
            +G                    + EY V D  +V  +   +       + C GV+    
Sbjct: 118 VNGG-------------------YGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV--Y 156

Query: 193 AAWKVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
              KV     G  V I G+G     AV  A A G R      +  VDI+  K  + ++ G
Sbjct: 157 KGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLR------VAAVDIDDAKLNLARRLG 210

Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
               +N     D   +  +++   GGA             + A    R G G   + G  
Sbjct: 211 AEVAVNAR---DTDPAAWLQKEI-GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNG-- 263

Query: 308 MHGSPISLNSIE-ILKGRSVCGTYFGGLK 335
           +          + +LKG ++ G+  G   
Sbjct: 264 LPPGDFGTPIFDVVLKGITIRGSIVGTRS 292

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  157 bits (399), Expect = 3e-45
 Identities = 98/328 (29%), Positives = 140/328 (42%), Gaps = 48/328 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIF 75
           KAA+     +PL I+E+E       E+ ++I    +CH+D+       D P  P LP+I 
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHG--DWPVKPKLPLIP 59

Query: 76  GHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMP 133
           GHE VG+VE VG  V  +K  D V +P  +  CG C  C S +   C      GY     
Sbjct: 60  GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY----S 115

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVG 192
            DG                    + EY      +VVKI  ++    A  + C GV+T   
Sbjct: 116 VDGG-------------------YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT--Y 154

Query: 193 AAWKVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
            A KV G + G  VAI+G+G     AV  A A G        ++ VDI  EK E+ K+ G
Sbjct: 155 KALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN------VVAVDIGDEKLELAKELG 208

Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
               +NP     +  ++ +KE   GG                A+NS R G G  V++G+ 
Sbjct: 209 ADLVVNPL---KEDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLP 263

Query: 308 MHGSPISLNSIEILKGRSVCGTYFGGLK 335
               PI +    +L G  + G+  G  K
Sbjct: 264 PEEMPIPIFDT-VLNGIKIIGSIVGTRK 290

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  156 bits (397), Expect = 9e-45
 Identities = 82/330 (24%), Positives = 126/330 (38%), Gaps = 46/330 (13%)

Query: 16  CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVI 74
            K  I       L  ++I V  PKA E+ I +  + +CH+D+  W    D P  + LP++
Sbjct: 6   QKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHG--DWPLPVKLPLV 63

Query: 75  FGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNM 132
            GHE  GVV  +GE V+  K  D   +   +  C  C  C+    + C      GY    
Sbjct: 64  GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY---- 119

Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGV 191
             DG+                   F +Y+  D      I     L     + C G++   
Sbjct: 120 THDGS-------------------FQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-- 158

Query: 192 GAAWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
             A K A +  G  VAI G        AV  A A G R      ++G+D    K E+ + 
Sbjct: 159 YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYR------VLGIDGGEGKEELFRS 212

Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
            G   FI+     D  +   + + TDGGA          + +  +    R   G TV++G
Sbjct: 213 IGGEVFIDFTKEKD--IVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVG 269

Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLK 335
           +       S    +++K  S+ G+Y G   
Sbjct: 270 MPAGAKCCSDVFNQVVKSISIVGSYVGNRA 299

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  156 bits (396), Expect = 1e-44
 Identities = 71/309 (22%), Positives = 110/309 (35%), Gaps = 44/309 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIR-----IKILCTSLCHSDVTFWKSSTDLPKLPL 71
           K       GK   +  IE E P           ++ L  + C SD+              
Sbjct: 2   KGFAMLSIGK---VGWIEKEKPA---PGPFDAIVRPLAVAPCTSDI--HTVFEGAIGERH 53

Query: 72  PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
            +I GHEAVG V  VG  V++ K  D V+           + +            G++ +
Sbjct: 54  NMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFS 113

Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVV---DITHVVKITPHIPLGIACLLSCGVS 188
             +DG                    F E+  V   D+     +   IPL  A ++   ++
Sbjct: 114 NVKDGV-------------------FGEFFHVNDADMNLA-HLPKEIPLEAAVMIPDMMT 153

Query: 189 TGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
           TG   A ++A +++G TV + G+G VGL    GA    A +I  V       +I  ++G 
Sbjct: 154 TGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA 212

Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
           TD IN        V Q I + TDG G D      G       A    + G      +   
Sbjct: 213 TDIINYK--NGDIVEQ-ILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNY- 267

Query: 308 MHGSPISLN 316
             G   +++
Sbjct: 268 -LGEGDNID 275

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  150 bits (382), Expect = 1e-42
 Identities = 54/331 (16%), Positives = 110/331 (33%), Gaps = 45/331 (13%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIF 75
           KA   +      V+ E     P++ E  ++ L   +C +D           P+    ++ 
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHR--DCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           GHEAVGVV        E++E D+V+P   R    G     +  + +         R  + 
Sbjct: 62  GHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV-ST 189
             G                     +E+      ++V+I P     +  L   +S    + 
Sbjct: 120 AHGY-------------------MSEFFTSPEKYLVRI-PRSQAELGFLIEPISITEKAL 159

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGV---DINPEKFEIGK 244
               A + A     S+  + G G++GL      +++      +  +   D      +I +
Sbjct: 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
           +   T   +      +T  + + ++     D+ +E  G       +  +     G   +L
Sbjct: 220 ELDATYVDS-----RQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGALL 272

Query: 305 GV---EMHGSPISLNSIEI-LKGRSVCGTYF 331
           GV               E+ L  +++ G+  
Sbjct: 273 GVPSDWAFEVDAGAFHREMVLHNKALVGSVN 303

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  130 bits (328), Expect = 2e-34
 Identities = 73/291 (25%), Positives = 104/291 (35%), Gaps = 56/291 (19%)

Query: 45  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
           +K++ T++C SD    +  T        ++ GHE  G V   G  VE ++  DLV   F+
Sbjct: 38  LKVVSTNICGSDQHMVRGRTTAQV---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN 94

Query: 105 RDCGECRDCKSSKSNTC--SKFGR-----GYRPNMPRDGTSRFRELKGDVIHHFLNISSF 157
             CG CR CK   +  C      R     GY       G                     
Sbjct: 95  VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGG-------------------Q 135

Query: 158 TEYSVV---DITHVV---KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL 211
            EY +V   D   +    +      +     LS  + TG   A   AGV  GSTV + G 
Sbjct: 136 AEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA 194

Query: 212 GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD 271
           G VGLA A  ARL  A+ +I  D+NP +    K  G           D  + + I  +  
Sbjct: 195 GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL---DTPLHEQIAALLG 251

Query: 272 G-GADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGV 306
               D   + +G                 +V+N     +R   GK  I G+
Sbjct: 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGL 301

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  127 bits (322), Expect = 1e-33
 Identities = 73/283 (25%), Positives = 109/283 (38%), Gaps = 40/283 (14%)

Query: 45  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
           +K++ T++C SD   ++    +PK     + GHE  G V   G  VE +   DLV   F+
Sbjct: 37  LKVVSTNICGSDQHIYRGRFIVPK---GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFN 93

Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV- 163
             CG CR+CK ++S+ C         N   D  + F                  EY +V 
Sbjct: 94  VACGRCRNCKEARSDVCENNL----VNPDADLGA-FGFDLKGWS------GGQAEYVLVP 142

Query: 164 --DITHVV---KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
             D   +    K      +    L+S  + TG       AGV+ GS V I G G VG   
Sbjct: 143 YADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCA 201

Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
           A GARL  A+ +I  D NPE+ ++    G    I+        +   I ++      D  
Sbjct: 202 AAGARLLGAACVIVGDQNPERLKLLSDAGFET-IDLRN--SAPLRDQIDQILGKPEVDCG 258

Query: 278 FECIGL--------------TSVMNDAFNSSREGWGKTVILGV 306
            + +G                  +N  F+  R G G   I G+
Sbjct: 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPGI 300

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  110 bits (278), Expect = 9e-28
 Identities = 77/343 (22%), Positives = 128/343 (37%), Gaps = 56/343 (16%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           +A + R  G P  L + ++ V  P   E+R+++   +L H DV   K     PKLPLP +
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVA-SPKLPLPHV 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G +  GVV++VG  VE     D V+      CG C  C + + N C ++         R
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQ---ILGEHR 117

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
            GT                   + EY V+   ++     ++    A  +     T    A
Sbjct: 118 HGT-------------------YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLT----A 154

Query: 195 W----KVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
           W       GV  G  V +   G      A+ +A   GAR      +I    + +K    K
Sbjct: 155 WQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR------VIATAGSEDKLRRAK 208

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
             G  + +N     D    + ++ +T G GAD   +  G          ++  G G+  I
Sbjct: 209 ALGADETVNYTH-PD--WPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAI 263

Query: 304 LGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQ 345
            G    G   +L    +  +  S+ G+       +S +  + +
Sbjct: 264 AGA-SSGYEGTLPFAHVFYRQLSILGSTMA---SKSRLFPILR 302

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  104 bits (261), Expect = 3e-25
 Identities = 66/341 (19%), Positives = 109/341 (31%), Gaps = 57/341 (16%)

Query: 17  KAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
           +           L + E  V      +I ++ L  SL + D    ++      L  P + 
Sbjct: 29  QEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMG-LDLAFPFVP 87

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
             +  GVVE+VG+ V   +  D V+  F     +     + ++      G          
Sbjct: 88  ASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLG------GAHP 141

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
           G                     +EY V+     V     +    A  L C   T    AW
Sbjct: 142 GV-------------------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT----AW 178

Query: 196 ----KVAGVEVGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
               +   +  G  V + G G V      +A A GA       +I    + EK +     
Sbjct: 179 FALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAE------VIVTSSSREKLDRAFAL 232

Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
           G    IN     D    + +  +T   GAD+  E  G  + +  +  +     G+  ++G
Sbjct: 233 GADHGINRLE-ED--WVERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPD-GRISVIG 287

Query: 306 VEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQ 345
           V + G  +S     +L K   V G   G    R  +  L  
Sbjct: 288 V-LEGFEVSGPVGPLLLKSPVVQGISVG---HRRALEDLVG 324

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 97.9 bits (244), Expect = 1e-22
 Identities = 61/359 (16%), Positives = 111/359 (30%), Gaps = 74/359 (20%)

Query: 17  KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDV---------------T 58
            A +      P   + ++++ V      E  + ++ +S+ ++ V                
Sbjct: 44  FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER 103

Query: 59  FWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSK 117
           + + S    +  LP  + G +  GVV   G  V   +  D V+        E  D  +  
Sbjct: 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDT 163

Query: 118 SNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL 177
                +   G+  N    G                      E ++V    ++    H+  
Sbjct: 164 MLDPEQRIWGFETN---FGG-------------------LAEIALVKSNQLMPKPDHLSW 201

Query: 178 GIACLLSCGVSTGVGA--AWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASK 229
             A       ST      +   AG++ G  V I+G        A   A+A GA       
Sbjct: 202 EEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN------ 255

Query: 230 IIGVDINPEKFEIGKKFGITDFIN--------------PATCGDKTVSQVIKEMTDG-GA 274
            I V  +P+K EI +  G    I+                    K   + I+E+T G   
Sbjct: 256 PICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDI 315

Query: 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGV-EMHGSPISLNSIEILKGRSVCGTYFG 332
           D  FE  G       +   +R+G G          +        +  +  + + G++F 
Sbjct: 316 DIVFEHPG-RETFGASVFVTRKG-GTITTCASTSGYMHEYDNRYL-WMSLKRIIGSHFA 371

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 86.9 bits (216), Expect = 3e-19
 Identities = 56/333 (16%), Positives = 97/333 (29%), Gaps = 80/333 (24%)

Query: 17  KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------- 66
           +A +    G P   + ++ +E+   +  ++R+K+L   +  SD+                
Sbjct: 28  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDI--------NMIQGNYG 79

Query: 67  PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR 126
               LP + G+E V  V +VG  V  +K  D V+P                         
Sbjct: 80  LLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA------------------------ 115

Query: 127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
                    GT                   +   +V     ++++   IPL  A  L   
Sbjct: 116 -----NAGLGT-------------------WRTEAVFSEEALIQVPSDIPLQSAATLGVN 151

Query: 187 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE---- 241
             T          ++ G +V        VG AV + A      + I V  +    +    
Sbjct: 152 PCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSD 210

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGK 300
             K  G    I           ++     D         C+G      +       G G 
Sbjct: 211 RLKSLGAEHVITEEELRRP---EMKNFFKDMPQPRLALNCVG-GKSSTELLRQLARG-GT 265

Query: 301 TVILGVEMHGSPISLN-SIEILKGRSVCGTYFG 332
            V  G  M   P+  + S+ I K   + G +  
Sbjct: 266 MVTYGG-MAKQPVVASVSLLIFKDLKLRGFWLS 297

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 87.2 bits (216), Expect = 5e-19
 Identities = 50/364 (13%), Positives = 101/364 (27%), Gaps = 71/364 (19%)

Query: 9   KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV----------- 57
           +A      K    +   K L + E+ +      E+ + ++ +S+ ++ V           
Sbjct: 31  RAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTF 90

Query: 58  -----TFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRD 112
                   +            + G +  GVV   G  V   K  D V+            
Sbjct: 91  HFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDE-QEP 149

Query: 113 CKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172
                    ++            G                      EY VV  + ++   
Sbjct: 150 ATHGDGMLGTEQRAWGFE--TNFGG-------------------LAEYGVVRASQLLPKP 188

Query: 173 PHIPLGIACLLSCGVSTGVGA--AWKVAGVEVGSTVAIFGLG------AVGLAVAEGARL 224
            H+    A +      T      + + A ++ G  V I+G        A+      G   
Sbjct: 189 AHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGI- 247

Query: 225 NRASKIIGVDINPEKFEIGKKFGITDFIN---------------PATCGDKTVSQVIKEM 269
                 + V  + +K    +  G    IN                     + +++++ E 
Sbjct: 248 -----PVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEK 302

Query: 270 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328
                D  FE  G       +   +R G G  V  G    G   + ++  + +K + + G
Sbjct: 303 AGREPDIVFEHTG-RVTFGLSVIVARRG-GTVVTCGS-SSGYLHTFDNRYLWMKLKKIVG 359

Query: 329 TYFG 332
           ++  
Sbjct: 360 SHGA 363

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 44/266 (16%)

Query: 1   MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
           + + S   KAG  I+   A      +PL   +I    P   +++I+I    +CHSD+   
Sbjct: 10  LESTSLYKKAGLKIKAVGA--YSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQV 67

Query: 61  KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSN 119
           +S  +      P + GHE VG V +VG+ VE+    DLV +      C  C +C+    N
Sbjct: 68  RS--EWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLEN 125

Query: 120 TCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH--IP 176
            C      Y  N P  D         G           +++  VV   +V++I  H    
Sbjct: 126 YCDHMTGTY--NSPTPDEPGH---TLG----------GYSQQIVVHERYVLRI-RHPQEQ 169

Query: 177 LGIACLLSC-GVSTGVGAAW---KVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRA 227
           L     L C G++T     +   +      G  V + G+G      + LA A GA     
Sbjct: 170 LAAVAPLLCAGITT-----YSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA----- 219

Query: 228 SKIIGVDINPEKFEIGKKFGITDFIN 253
             ++    +  K E  K  G  + +N
Sbjct: 220 -HVVAFTTSEAKREAAKALGADEVVN 244

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 84.6 bits (210), Expect = 2e-18
 Identities = 79/349 (22%), Positives = 129/349 (36%), Gaps = 61/349 (17%)

Query: 5   SASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST 64
           S SP+    ++      R     L             ++R K+L   +CHSD+   K+  
Sbjct: 6   SKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKN-- 63

Query: 65  DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK 123
           D      P++ GHE VG V  VG  V++V   D V +      C  C  C +   N C K
Sbjct: 64  DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPK 123

Query: 124 FGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 182
               Y       DGT  +    G           ++ + V +  ++++   ++PL     
Sbjct: 124 MILTY--ASIYHDGTITY----G----------GYSNHMVANERYIIRFPDNMPLDGGAP 167

Query: 183 LSC-GVST-------GVGAAWKVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASK 229
           L C G++        G+           G  + I GLG     AV  A A G+      K
Sbjct: 168 LLCAGITVYSPLKYFGLDEP--------GKHIGIVGLGGLGHVAVKFAKAFGS------K 213

Query: 230 IIGVDINPEKF-EIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCFECIGLTSV 286
           +  +  +P K  E  K FG   F+         VS+  ++M    G  D   + +     
Sbjct: 214 VTVISTSPSKKEEALKNFGADSFL---------VSRDQEQMQAAAGTLDGIIDTVSAVHP 264

Query: 287 MNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335
           +   F   +   GK +++G       +   S+ I   + V G+  GG+K
Sbjct: 265 LLPLFGLLKSH-GKLILVGAPEKPLELPAFSL-IAGRKIVAGSGIGGMK 311

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 56/241 (23%), Positives = 89/241 (36%), Gaps = 38/241 (15%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
             +     +         ++ I IL   +CHSD+    S  +  +   P+I GHE  G++
Sbjct: 13  KDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYS--EWKEGIYPMIPGHEIAGII 70

Query: 84  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 142
           + VG+ V++ K  D+V +  F   C  C+ CK  +   C+K    Y              
Sbjct: 71  KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTY--------DCLDSF 122

Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVST-------GVGAA 194
              +          ++   VVD  +V+ +  + PL     L C G++T        V   
Sbjct: 123 HDNEPHM-----GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKG 177

Query: 195 WKVAGVEVGSTVAIFGLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
            KV     G      GLG  AV  AVA GA      ++     N  K +     G+  F 
Sbjct: 178 TKVGVAGFG------GLGSMAVKYAVAMGA------EVSVFARNEHKKQDALSMGVKHFY 225

Query: 253 N 253
            
Sbjct: 226 T 226

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 81.7 bits (202), Expect = 2e-17
 Identities = 59/355 (16%), Positives = 102/355 (28%), Gaps = 88/355 (24%)

Query: 13  VIRCKAAICRIPGKP---LVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTF-------- 59
           +I  +A +    G+P   L  +  E++       E+ +K L + +  SD+          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 60  WKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSN 119
              +T           G+E +  V  VG  V  ++  D V+                   
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVI------------------- 101

Query: 120 TCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
                     P+    GT                   +  +++ +    +K+ P+     
Sbjct: 102 ----------PSHVNFGT-------------------WRTHALGNDDDFIKL-PNPAQSK 131

Query: 180 ACLLSCGVSTGVGAAWKV------------AGVEVGSTVAIF--GLGAVGLAVAEGARLN 225
           A     G++   GA   V              +  G    I   G  AVG   ++  +L 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191

Query: 226 RASKIIGV----DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD---GGADYCF 278
                I V        E     K+ G T  I       +     IKE      G A    
Sbjct: 192 NF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLAL 250

Query: 279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILKGRSVCGTYFG 332
            C+G                G  +  G  M   P+++  S+ I K  +  G +  
Sbjct: 251 NCVG-GKSSTGIARKLNNN-GLMLTYGG-MSFQPVTIPTSLYIFKNFTSAGFWVT 302

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 64/345 (18%), Positives = 110/345 (31%), Gaps = 73/345 (21%)

Query: 17  KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           K       G P   L +E   +EP K  E+ +++L   +  SD+    +     ++PLP 
Sbjct: 6   KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIP-ITGAYAHRIPLPN 64

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           I G+E VG+VE+VG +V        VLP                                
Sbjct: 65  IPGYEGVGIVENVGAFVSRELIGKRVLP-------------------------------- 92

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
                                 ++ EY       VV I   I    A  +     T    
Sbjct: 93  -----------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVT 135

Query: 194 AWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
             +   ++    + +       G     L+     RL      I V  N +  E   + G
Sbjct: 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRL------IAVTRNNKHTEELLRLG 189

Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
               I+ +T     + + + E+T+G GAD   + IG     N+   S R   G  + +G+
Sbjct: 190 AAYVIDTST-AP--LYETVMELTNGIGADAAIDSIGGPDG-NELAFSLRPN-GHFLTIGL 244

Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKV 351
            + G  ++   I + K +     +              Q+    +
Sbjct: 245 -LSGIQVNWAEI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHL 287

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 77.1 bits (190), Expect = 6e-16
 Identities = 49/357 (13%), Positives = 94/357 (26%), Gaps = 75/357 (21%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
            A       +  V            ++ +++   ++  SD                   G
Sbjct: 13  TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFA--TPWAFLG 67

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
            +  G V +VG  V  ++  D V        G                     P  P  G
Sbjct: 68  TDYAGTVVAVGSDVTHIQVGDRV-------YG---------------AQNEMCPRTPDQG 105

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH--------IPLGIA----CLLS 184
                               F++Y+V       KI           +P GI+     +  
Sbjct: 106 A-------------------FSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKL 146

Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFG-LGAVG-----LAVAEGARLNRASKIIGVDINPE 238
            G+     +A +         V ++G   A       +    G         I    +P 
Sbjct: 147 LGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYI------PIAT-CSPH 199

Query: 239 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNS-SREG 297
            F++ K  G  +  +        ++Q I+  T     Y  +CI         F +  R G
Sbjct: 200 NFDLAKSRGAEEVFDYR---APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG 256

Query: 298 WGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR 354
                +     H +   + + +   G ++ G       P     +  ++   +   R
Sbjct: 257 GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWR 313

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 76.9 bits (190), Expect = 7e-16
 Identities = 69/327 (21%), Positives = 120/327 (36%), Gaps = 55/327 (16%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
           P   L      +      ++ I+I+C  +CH+D+   K+  DL     P++ GHE VG V
Sbjct: 18  PSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKN--DLGMSNYPMVPGHEVVGEV 75

Query: 84  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFR 141
             VG  V +    D+V +      CG C  C+      C K    Y  N    +G     
Sbjct: 76  VEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSY--NDVYINGQPTQ- 132

Query: 142 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA-----AWK 196
              G           F + +VV    VVKI   + +  A  L C    GV        + 
Sbjct: 133 ---G----------GFAKATVVHQKFVVKIPEGMAVEQAAPLLCA---GVTVYSPLSHFG 176

Query: 197 VAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITD 250
           +     G    I GLG      V +A A G        +  +  + +K  E  +  G  D
Sbjct: 177 LKQ--PGLRGGILGLGGVGHMGVKIAKAMGH------HVTVISSSNKKREEALQDLGADD 228

Query: 251 FINPATCGDKTVSQVIKEMTD--GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
           ++         +     +M++     DY  + + +   +    +  +   GK +++GV  
Sbjct: 229 YV---------IGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVIN 278

Query: 309 HGSPISLNSIEILKGRSVCGTYFGGLK 335
           +        + +L  + + G++ G +K
Sbjct: 279 NPLQFLTPLL-MLGRKVITGSFIGSMK 304

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 76.4 bits (189), Expect = 1e-15
 Identities = 72/329 (21%), Positives = 115/329 (34%), Gaps = 57/329 (17%)

Query: 24  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
             K     + + +P    +I IKI    +C SD+           + +P++ GHE VG V
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAG--HWGNMKMPLVVGHEIVGKV 74

Query: 84  ESVGEYVE-EVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRF 140
             +G      +K    V +      C EC  CK+     C+KF   Y  + P  DG    
Sbjct: 75  VKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY--SQPYEDGYVSQ 132

Query: 141 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVST-------GVG 192
               G           +  Y  V    VV I  +IP  +A  L C G++        G G
Sbjct: 133 ----G----------GYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG 178

Query: 193 AAWKVAGVEVGSTVAIFGLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
              KV  V +G      G+G     ++ A GA      +   +  +  K E   K G   
Sbjct: 179 PGKKVGIVGLG------GIGSMGTLISKAMGA------ETYVISRSSRKREDAMKMGADH 226

Query: 251 FINPATCGDKTVSQVIKEMTDGGA---DYCFECI-GLTSVMNDAFNSSREGWGKTVILGV 306
           +I          +    +  +      D    C   LT +  +    + +  G+ V + +
Sbjct: 227 YI---------ATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISI 277

Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLK 335
                 +SL     LK  S+  +  G +K
Sbjct: 278 PEQHEMLSLKPY-GLKAVSISYSALGSIK 305

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 68.4 bits (168), Expect = 5e-13
 Identities = 63/334 (18%), Positives = 107/334 (32%), Gaps = 90/334 (26%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------P 67
           KA   +    P  LV  ++E        + + +    +C  D         L        
Sbjct: 23  KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY--------LMTKGEYQL 74

Query: 68  KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG 127
           K+  P + G E  GVV S  E                                    G G
Sbjct: 75  KMEPPFVPGIETAGVVRSAPE------------------------------------GSG 98

Query: 128 YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187
            +P              GD +  F  I  + E   V  ++++   P +    A  L    
Sbjct: 99  IKP--------------GDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANY 144

Query: 188 STGVGAAWKVAGVEVGSTVAIF------GLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
            T   A  +   +  G TV +       G  A+ +A   GA+      +I V       E
Sbjct: 145 HTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAK------VIAVVNRTAATE 198

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGK 300
             K  G    +      ++  ++ ++E T G G D   + IG     +DA  +     G+
Sbjct: 199 FVKSVGADIVLP----LEEGWAKAVREATGGAGVDMVVDPIG-GPAFDDAVRTLASE-GR 252

Query: 301 TVILGVEMHGS--PISLNSIEILKGRSVCGTYFG 332
            +++G    G    I +N + +L+  S+ G  +G
Sbjct: 253 LLVVGF-AAGGIPTIKVNRL-LLRNASLIGVAWG 284

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 49/345 (14%), Positives = 93/345 (26%), Gaps = 94/345 (27%)

Query: 17  KAAICRIPGKP--------------LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS 62
           KA +    G                L    I V  P   ++ IK+   S+  SDV F K 
Sbjct: 12  KALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKG 71

Query: 63  STDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCS 122
               P+       G E VG + + G+                                  
Sbjct: 72  QYGQPR-VKGRPAGFEGVGTIVAGGD---------------------------------- 96

Query: 123 KFGRGYRPNMPRDGTSRFRELKGDVIHHFLNIS---SFTEYSVVDITHVVKITPHIPLGI 179
                       +  ++     G  +     +S   S+ EY+V +    + +   +    
Sbjct: 97  ------------EPYAKSL--VGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDED 142

Query: 180 ACLLSCGVSTGVGAAW---KVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKI 230
              +     T    A     +   E      +           +GLA  EG R       
Sbjct: 143 GAAMIVNPLT----AIAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFR------P 192

Query: 231 IGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMND 289
           I      E+  + K  G    +N     D      ++E+          + +    + + 
Sbjct: 193 IVTVRRDEQIALLKDIGAAHVLNEKA-PD--FEATLREVMKAEQPRIFLDAVT-GPLASA 248

Query: 290 AFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFG 332
            FN+  +   + +I G  +      +      I + + + G +  
Sbjct: 249 IFNAMPKR-ARWIIYGR-LDPDATVIREPGQLIFQHKHIEGFWLS 291

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 46/276 (16%), Positives = 79/276 (28%), Gaps = 70/276 (25%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
                   G P  L   E     P   EI+++     +   D          P LP    
Sbjct: 3   TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPS--G 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G EA G+V  VG  V+ +K                                        
Sbjct: 61  LGTEAAGIVSKVGSGVKHIKA--------------------------------------- 81

Query: 135 DGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTGV 191
                     GD V++    + +++    +       +   I    A    L      G+
Sbjct: 82  ----------GDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLK-----GL 126

Query: 192 GA---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
                  K   ++           G VGL   + A+    +K+IG     +K +   K G
Sbjct: 127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKA-LGAKLIGTVGTAQKAQSALKAG 185

Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
               IN     ++ + + +KE+T G      ++ +G
Sbjct: 186 AWQVIN---YREEDLVERLKEITGGKKVRVVYDSVG 218

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 54/279 (19%), Positives = 89/279 (31%), Gaps = 71/279 (25%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPV 73
            AA+    G P   V EE++V  P   ++R++     +   D          L     P+
Sbjct: 3   MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
           + G EA  VVE VG  V +                                         
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTV-------------------------------------- 84

Query: 134 RDGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVS--TG 190
                      G+ V      + ++++  +     ++K+   + L    L    +   T 
Sbjct: 85  -----------GERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTA 133

Query: 191 VGAAWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
                +   V+ G  V I       G   V  A   GA       +IG     EK E  +
Sbjct: 134 QYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT------VIGTVSTEEKAETAR 187

Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
           K G    IN      +  ++V++E+T G G D  ++ IG
Sbjct: 188 KLGCHHTIN---YSTQDFAEVVREITGGKGVDVVYDSIG 223

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 52/274 (18%), Positives = 94/274 (34%), Gaps = 65/274 (23%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           K  +    G    +  E+  V      E+ IK   T + + +  F      +     P +
Sbjct: 10  KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF---RKGIYPCEKPYV 66

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G EA G V + G+ V   +  D V                            Y      
Sbjct: 67  LGREASGTVVAKGKGVTNFEVGDQV---------------------------AY------ 93

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVV-DITHVVKITPHIPLGIACLLSCGVSTGVGA 193
                            ++ S+F +YS +     V+K+          L + G+   + A
Sbjct: 94  -----------------ISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTA 136

Query: 194 ---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
                +   V+ G  V +F   G VGL + +  ++ + +  I V    EK +I K++G  
Sbjct: 137 LSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKM-KGAHTIAVASTDEKLKIAKEYGAE 195

Query: 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
             IN      + + + + + T+G G D  F+ +G
Sbjct: 196 YLIN---ASKEDILRQVLKFTNGKGVDASFDSVG 226

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 62.2 bits (152), Expect = 5e-11
 Identities = 55/282 (19%), Positives = 91/282 (32%), Gaps = 82/282 (29%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPV 73
           K       G P  L   + E E P    + ++     L   D  +    + L P   LP 
Sbjct: 3   KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYY---RSGLYPAPFLPS 59

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
             G E  GVVE+VG+ V   K                                       
Sbjct: 60  GLGAEGAGVVEAVGDEVTRFKV-------------------------------------- 81

Query: 134 RDGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTG 190
                      GD V +    + +++E  V+   ++VK+   +    A   +L      G
Sbjct: 82  -----------GDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLK-----G 125

Query: 191 VGA---AWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
           +       +   V+ G  +         G  A   A A GA+      +IG   +PEK  
Sbjct: 126 LTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK------LIGTVSSPEKAA 179

Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
             K  G  + I+      + V++ + E+TDG      ++ +G
Sbjct: 180 HAKALGAWETID---YSHEDVAKRVLELTDGKKCPVVYDGVG 218

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 53/363 (14%), Positives = 106/363 (29%), Gaps = 95/363 (26%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------P 67
           +A +    G    L +    +  P+  E++I++    L   D+        +        
Sbjct: 5   RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDL--------MVRQGNIDN 56

Query: 68  KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG 127
               P++ G E  G+VE++G+ V+  +  D V                            
Sbjct: 57  PPKTPLVPGFECSGIVEALGDSVKGYEIGDRV-------MAFVN-------------YNA 96

Query: 128 YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187
           +                              E     +  V KI   +    A       
Sbjct: 97  W-----------------------------AEVVCTPVEFVYKIPDDMSFSEAAAFPMNF 127

Query: 188 STGVGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
            T     ++VA +  G +V +    G VG AVA+         + G   +  K E  K  
Sbjct: 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIKDS 186

Query: 247 GITDFINPATCGDKTV--SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
                +      D+     Q +K ++  G D   +C+          +  +   G  ++ 
Sbjct: 187 V--THLF-----DRNADYVQEVKRISAEGVDIVLDCLC-GDNTGKGLSLLKPL-GTYILY 237

Query: 305 GV---------------EMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYL 348
           G                +       +N I++  + + + G     L  +   A L +  +
Sbjct: 238 GSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVV 297

Query: 349 DKV 351
           +K+
Sbjct: 298 EKL 300

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 58.3 bits (142), Expect = 1e-09
 Identities = 62/340 (18%), Positives = 106/340 (31%), Gaps = 75/340 (22%)

Query: 17  KAAICRIPGKP--LVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           +A      G P  L +  +I V  PK  ++ IK+    +   +    +S T   K  LP 
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYI-RSGTYSRKPLLPY 89

Query: 74  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
             G +  GV+E+VG+     K+ D V                      S    G      
Sbjct: 90  TPGSDVAGVIEAVGDNASAFKKGDRVF--------------------TSSTISG------ 123

Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
                                  + EY++     V K+   +       +     T   A
Sbjct: 124 ----------------------GYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRA 161

Query: 194 AWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
               A V+ G +V +       GL A  +A A G +      I+G     E  +I  + G
Sbjct: 162 LIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK------ILGTAGTEEGQKIVLQNG 215

Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
             +  N            IK+     G D   E +     ++   +    G G+ +++G 
Sbjct: 216 AHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLLSHG-GRVIVVGS 270

Query: 307 EMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQ 345
                 I +N  + + K  S+ G        + +    A 
Sbjct: 271 ---RGTIEINPRDTMAKESSIIGV-TLFSSTKEEFQQYAA 306

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 36/253 (14%), Positives = 68/253 (26%), Gaps = 80/253 (31%)

Query: 17  KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLP 72
           +             + +  +++    A +I ++     +   D   WK    +       
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVD---WKFIKANPINWSNG 59

Query: 73  VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
            + G +  GV+  VG  V+       V                            Y  ++
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKMLGRRVA---------------------------YHTSL 92

Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI----ACLLSCGVS 188
            R G+                   F E++V++   V+     +P  +    A  L C + 
Sbjct: 93  KRHGS-------------------FAEFTVLNTDRVM----TLPDNLSFERAAALPCPLL 129

Query: 189 TGVGAAW---KVAGVEVGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKF 240
           T    AW   +   +     V I G GAV      +    G        +  V       
Sbjct: 130 T----AWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYV------VDLVS-ASLSQ 178

Query: 241 EIGKKFGITDFIN 253
            +  K G+     
Sbjct: 179 ALAAKRGVRHLYR 191

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 42/273 (15%), Positives = 84/273 (30%), Gaps = 64/273 (23%)

Query: 17  KAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL 71
           +  +             +  +  V  P   ++ ++     +  SD+  + +    P +  
Sbjct: 25  QKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDI-NYSAGRYDPSVKP 83

Query: 72  PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
           P   G E +G V ++G                                            
Sbjct: 84  PFDIGFEGIGEVVALGLSA----------------------------------------- 102

Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG-VSTG 190
                ++R+    G  +  ++   SF EY+VV  +    +    P  +  L+S       
Sbjct: 103 -----SARYTV--GQAV-AYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYIS 154

Query: 191 VGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
           +    ++ G+  G  V +    G  G    + ++  +   +IG   + EK    K  G  
Sbjct: 155 LK---ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCD 210

Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282
             IN        V  V+K+    G D  +E +G
Sbjct: 211 RPIN-YKTEP--VGTVLKQEYPEGVDVVYESVG 240

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 40/221 (18%), Positives = 60/221 (27%), Gaps = 63/221 (28%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP---KLPL 71
           KA      G P  L + +      +  ++ IK+   SL   D      S  +    K  L
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 72  PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
           P   G++  G V  +G  V  V   D V                         G      
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKV------------------------MG---IAG 100

Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
            P                       + EY       ++         ++ L +  + T  
Sbjct: 101 FPDHP------------------CCYAEYVCASPDTII----QKLEKLSFLQAASLPTAG 138

Query: 192 GAAWKV---AGVEVGSTVAIFG-LGAVG-----LAVAEGAR 223
             A +    A V+ G  V I    G VG     LA  +G  
Sbjct: 139 LTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTT 179

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 50/277 (18%), Positives = 85/277 (30%), Gaps = 71/277 (25%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
            AA+      P V+ ++    P   ++ ++I  +     D           + PLP I G
Sbjct: 9   IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
            +  G V +VG  V+  +  D V        G                       +    
Sbjct: 69  MDLAGTVVAVGPEVDSFRVGDAV-------FG-----------------------LTGG- 97

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW- 195
                 L+G          +  +++ VD   +       P  +    +  +      AW 
Sbjct: 98  ---VGGLQG----------THAQFAAVDARLLA----SKPAALTMRQASVLPLVFITAWE 140

Query: 196 ---KVAGVEVGSTVAIF----GLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
                A V+ G TV I     G+G  A+ +A+A GAR      +          E  +  
Sbjct: 141 GLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGAR------VFATA-RGSDLEYVRDL 193

Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
           G T          +       E T G G D  ++ +G
Sbjct: 194 GATPIDA-----SREPEDYAAEHTAGQGFDLVYDTLG 225

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 52.6 bits (126), Expect = 9e-08
 Identities = 44/354 (12%), Positives = 85/354 (24%), Gaps = 108/354 (30%)

Query: 24  PGKPLV--IEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP----------- 70
               L   ++ I+   P   E+ I+I  + L  SD+     + D+               
Sbjct: 14  SSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVT 73

Query: 71  ----------------LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK 114
                             +  G+E  GVV   G                           
Sbjct: 74  ARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT--------------- 118

Query: 115 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174
                  +  G                               +++Y  +     + +   
Sbjct: 119 ------VAAIGGA----------------------------MYSQYRCIPADQCLVLPEG 144

Query: 175 IPLGI-ACLLSCGVSTGVGAAW---KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASK 229
                 A      ++     A    +   +E  S +        +G  + +    +   K
Sbjct: 145 ATPADGASSFVNPLT-----ALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-K 198

Query: 230 IIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG------ 282
           ++ +    E+ ++ K  G     N        +  +  E     GA   F+  G      
Sbjct: 199 LVNIVRKQEQADLLKAQGAVHVCN--AASPTFMQDL-TEALVSTGATIAFDATGGGKLGG 255

Query: 283 -LTSVMNDAFNSSREGW-------GKTVILGVEMHGSPISLNSIEILKGRSVCG 328
            + + M  A N S   +        K V L   +  SP   N         + G
Sbjct: 256 QILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRN-FGMAWGMGG 308

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 61/333 (18%), Positives = 106/333 (31%), Gaps = 75/333 (22%)

Query: 17  KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           +    +  G P  +VI +  +      E+ ++     +   D+   + S   PK     I
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPK-DASPI 88

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            G E  G +  VG                                               
Sbjct: 89  LGLELSGEIVGVG----------------------------------------------- 101

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
            G S +    GD +    N  ++ EY ++    ++          A  L     T     
Sbjct: 102 PGVSGYAV--GDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANL 159

Query: 195 WKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
           +++AG+  G +V I       G  A+ LA A GA       +     +  K E  ++ G 
Sbjct: 160 FQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAE------VYATAGSTGKCEACERLGA 213

Query: 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
              IN      +  + VIK  T  G D   + IG  +       S  +  G   I+   +
Sbjct: 214 KRGIN---YRSEDFAAVIKAETGQGVDIILDMIG-AAYFERNIASLAKD-GCLSIIAF-L 267

Query: 309 HGS-PISLNSIEILKGR-SVCGTYFGGLKPRSD 339
            G+    +N   I+  R +V G+    ++PR+ 
Sbjct: 268 GGAVAEKVNLSPIMVKRLTVTGST---MRPRTA 297

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 47/291 (16%), Positives = 83/291 (28%), Gaps = 73/291 (25%)

Query: 17  KAAICRIPGK---PLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFWKS-STDLPKLP 70
           KA     P        + +IE+  P     +I +++   S+   D   +K   +  P   
Sbjct: 24  KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGT 80

Query: 71  LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
              + G++A G+V +VG  V   +  D V                            Y  
Sbjct: 81  DWKVIGYDAAGIVSAVGPDVTLFRPGDEVF---------------------------YAG 113

Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
           ++ R G                   +  E+ +VD     +I    P  +    +  +   
Sbjct: 114 SIIRPG-------------------TNAEFHLVD----ERIVGRKPKTLDWAEAAALPLT 150

Query: 191 VGAAW---------KVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
              AW                   + I  G G VG    + AR      +I     PE  
Sbjct: 151 SITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ 210

Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAF 291
           E  K  G    I+ +    K ++  +  +  G   + F          +  
Sbjct: 211 EWVKSLGAHHVIDHS----KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIA 257

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 13/71 (18%)

Query: 186 GVSTGVGAAWKVAGVEV--GSTVAIFGLGAVGLAVA-----EGARLNRASKIIGVDINPE 238
           GV   + A     G+    G TV + GLGAVG ++A      GA      +++  D + E
Sbjct: 156 GVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA------QLLVADTDTE 209

Query: 239 KFEIGKKFGIT 249
           +       G T
Sbjct: 210 RVAHAVALGHT 220

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 15/75 (20%)

Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKL 69
          KA + +  G PL + ++     +  E+ +++    L  +D         L        +L
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADH--------LMRLGAYLTRL 53

Query: 70 PLPVIFGHEAVGVVE 84
            P I G E VGVVE
Sbjct: 54 HPPFIPGMEVVGVVE 68

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 9/88 (10%)

Query: 17 KAAICRIPGK-----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL 71
          KA     P K           +++  PK  EI +KI   S+   D    K          
Sbjct: 4  KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD---TKQRLMDVS-KA 59

Query: 72 PVIFGHEAVGVVESVGEYVEEVKERDLV 99
          P + G +A+GVVESVG  V    + D+V
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDIV 87

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 205 TVAIFGLGAVGLAVAEGARLNRASK-IIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 263
             A+ GLG  G ++ +   L+R    ++ VDIN EK           +   A   + T  
Sbjct: 8   QFAVIGLGRFGGSIVK--ELHRMGHEVLAVDINEEKVN-----AYASYATHAVIANATEE 60

Query: 264 QVIKEMTDGGADYCFECIG 282
             +  +     +Y    IG
Sbjct: 61  NELLSLGIRNFEYVIVAIG 79

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 19/100 (19%), Positives = 30/100 (30%), Gaps = 17/100 (17%)

Query: 17  KAAICRIPGKPLVIEEIEV----EPPKAWEIRIKILCTSLCHSDV-------------TF 59
            A +    GK  V+   +           E+ +K+   S+   DV               
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 60  WKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 99
                 +     P+  G +  GVV   G  V+  K  D V
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV 122

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	373
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.89
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.26
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.88
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.84
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.69
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.6
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.54
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.47
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.39
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.11
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.11
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.09
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.05
2b25_A	336	Hypothetical protein; structural genomics, methyl	98.01
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.97
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.95
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.91
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.88
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.81
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.79
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.75
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.71
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.63
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.63
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.56
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.52
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.5
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.49
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.49
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.42
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.41
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.36
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.34
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.28
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.23
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.2
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.2
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.11
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.1
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.06
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.01
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.0
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.99
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.99
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.99
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.98
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.98
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.97
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.93
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.92
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.91
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.91
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.91
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.9
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.9
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.89
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.89
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.89
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.88
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.88
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.87
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.87
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.84
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.81
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.79
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.79
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.78
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.77
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.77
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.76
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.75
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.75
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.75
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.75
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.74
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.74
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.74
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.74
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.73
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.72
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.72
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.7
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.69
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.69
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.69
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.69
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.66
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.66
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.66
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.65
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.64
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.62
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.61
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.61
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.61
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.6
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.59
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.58
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.57
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.57
1spx_A	278	Short-chain reductase family member (5L265); paral	96.57
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.56
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.56
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.55
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.54
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.54
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.54
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.54
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.53
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.52
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.51
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.5
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.5
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.5
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.5
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.49
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.48
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.48
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.48
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.48
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.47
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.47
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.46
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.46
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.46
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.45
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.45
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.45
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.44
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.44
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.43
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.42
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.42
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.42
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.42
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.41
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.41
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.41
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.41
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.41
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.4
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.4
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.4
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.4
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.4
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.4
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.4
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.39
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.39
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.39
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.39
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.38
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.38
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.37
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.37
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.36
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.36
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.36
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.36
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.35
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.35
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.34
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.34
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.34
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.34
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.33
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.33
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.33
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.32
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.32
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.31
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.31
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.31
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.3
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.3
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.3
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.3
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.29
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.29
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.28
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.28
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.28
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.28
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.27
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.27
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.27
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.27
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.27
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.27
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.27
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.27
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.26
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.25
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.25
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.25
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.24
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.24
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.24
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.24
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.24
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.24
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.24
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.23
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.23
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.23
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.23
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.22
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.21
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.2
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.2
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.2
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.19
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.19
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.18
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.18
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.18
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.18
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	96.18
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.17
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.17
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.16
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.15
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.14
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.14
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.14
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.12
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.11
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.11
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.11
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.1
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.1
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.1
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.09
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.08
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	96.08
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.07
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.07
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.07
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.07
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.07
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.06
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.06
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.06
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.05
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.05
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.05
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.05
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.05
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.05
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.05
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.04
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.03
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.02
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.02
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.02
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.01
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.01
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.0
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.99
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.98
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.98
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.98
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.98
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.97
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	95.96
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.95
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.94
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.94
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.94
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.93
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.93
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.92
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.92
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.91
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.91
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.91
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.91
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.9
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.9
4had_A	350	Probable oxidoreductase protein; structural genomi	95.89
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.89
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.88
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.88
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.87
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.87
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.87
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.87
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.87
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.86
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.86
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.86
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.86
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.86
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.86
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.86
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.84
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.83
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.8
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	95.8
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.8
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.78
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.77
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.77
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.77
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.77
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.76
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.76
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.75
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.75
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.74
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.73
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.73
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.73
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.73
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.72
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.69
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.69
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.68
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.68
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	95.68
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.66
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.65
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.65
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.63
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.62
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	95.62
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.62
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.61
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.6
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	95.59
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.58
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.57
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.56
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.55
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.55
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.55
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.55
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.54
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.52
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.52
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.52
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.51
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.51
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.51
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.5
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.5
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.49
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.49
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.49
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.48
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.47
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.47
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.45
2cmg_A	262	Spermidine synthase; transferase, putrescine amino	95.44
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.43
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.43
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	95.42
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.42
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.41
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	95.4
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.4
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.4
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	95.4
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.39
1xxl_A	239	YCGJ protein; structural genomics, protein structu	95.38
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	95.38
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.37
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.37
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.37
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.37
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.36
3dou_A	191	Ribosomal RNA large subunit methyltransferase J; c	95.36
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.36
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.35
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.35
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.34
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.34
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.33
2esr_A	177	Methyltransferase; structural genomics, hypothetic	95.33
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.32
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.3
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.3
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.29
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.29
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	95.28
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.28
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.28
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.28
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	95.26
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.26
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.26
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.25
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.25
3bzb_A	281	Uncharacterized protein; RED ALGA, protein structu	95.25
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.24
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.24
2o07_A	304	Spermidine synthase; structural genomics, structur	95.24
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	95.22
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.21
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.2
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.18
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.18
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.18
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.17
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.17
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.16
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	95.16
3ege_A	261	Putative methyltransferase from antibiotic biosyn	95.16
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	95.16
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.14
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.14
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.14
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.12
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	95.12
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.12
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.12
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	95.12
3lpm_A	259	Putative methyltransferase; structural genomics, p	95.1
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.1
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.1
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	95.09
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.08
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	95.07

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.4e-60  Score=462.74  Aligned_cols=356  Identities=47%  Similarity=0.820  Sum_probs=314.1

Q ss_pred             CCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335            9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      ++.+|++|||+++++++++++++++|.|+|+++||||||.++|||++|++.+.|..+..  .+|.++|||++|+|+++|+
T Consensus         2 ~~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~   79 (378)
T 3uko_A            2 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEG--LFPCILGHEAAGIVESVGE   79 (378)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEECT
T ss_pred             CcccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCC--CCCccCCccceEEEEEeCC
Confidence            35689999999999998889999999999999999999999999999999999986655  7899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      +|++|++||||++.+...|+.|++|++|++++|++.......|+. .+|..+|. .+|.++.++++.|+|+||+.+|++.
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~  158 (378)
T 3uko_A           80 GVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFS-VNGKPIYHFMGTSTFSQYTVVHDVS  158 (378)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEE-ETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             CCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccc-cCCcccccccCCcceEeEEEechhh
Confidence            999999999999999999999999999999999986542223332 33433332 2445666677778999999999999


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      ++++|+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+++|++++++++|+++++++|
T Consensus       159 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lG  238 (378)
T 3uko_A          159 VAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFG  238 (378)
T ss_dssp             EEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTT
T ss_pred             eEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcC
Confidence            99999999999999999999999998888899999999999999999999999999999978999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhcc-CCceEEEEcccCCCCccccCHHHHhhCcEE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVEMHGSPISLNSIEILKGRSV  326 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i  326 (373)
                      +++++|+++ .+.++.+.+++++++++|+||||+|.+.+++.+++++++ + |+++.+|.......++++...+++++++
T Consensus       239 a~~vi~~~~-~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i  316 (378)
T 3uko_A          239 VNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVTGRVW  316 (378)
T ss_dssp             CCEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT-CEEEECSCCCTTCCEEECTHHHHTTCEE
T ss_pred             CcEEEcccc-CchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccC-CEEEEEcccCCCCccccCHHHHhcCcEE
Confidence            999999872 127899999999988999999999998779999999999 4 9999999866556677777777779999


Q ss_pred             EEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          327 CGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .|+.++.+...+++.++++++.+|++++     +.|+++++++|++.+
T Consensus       317 ~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~  364 (378)
T 3uko_A          317 KGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLL  364 (378)
T ss_dssp             EECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHT
T ss_pred             EEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHH
Confidence            9998877666789999999999999975     678999999988754

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=7.3e-58  Score=444.43  Aligned_cols=354  Identities=43%  Similarity=0.686  Sum_probs=299.7

Q ss_pred             CCCCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEe
Q 017335            7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV   86 (373)
Q Consensus         7 ~~~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v   86 (373)
                      |++++.|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++.+.|..+ .  .+|.++|||++|+|+++
T Consensus         1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~--~~P~v~GhE~~G~V~~v   77 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-S--KFPVILGHEAVGVVESI   77 (373)
T ss_dssp             -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-C--CSSBCCCCCEEEEEEEE
T ss_pred             CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-C--CCCcccCcCceEEEEEE
Confidence            45677899999999999986699999999999999999999999999999999988765 3  68999999999999999


Q ss_pred             CCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc
Q 017335           87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT  166 (373)
Q Consensus        87 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  166 (373)
                      |++|++|++||||++.+...|+.|.+|++|++++|++.......|+..+|..++. .+|.+++++...|+|+||+.+|++
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~  156 (373)
T 1p0f_A           78 GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADI  156 (373)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEETT
T ss_pred             CCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccc-cCCcccccccCCccceeEEEEchh
Confidence            9999999999999999999999999999999999998653211233323211110 112233333345799999999999


Q ss_pred             ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017335          167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF  246 (373)
Q Consensus       167 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l  246 (373)
                      .++++|++++++ ||++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+++|++++++++++++++++
T Consensus       157 ~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l  235 (373)
T 1p0f_A          157 AVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL  235 (373)
T ss_dssp             SEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT
T ss_pred             hEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence            999999999999 9999999999999888888999999999999999999999999999987899999999999999999


Q ss_pred             CCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCC-ceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       247 ga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      |+++++++++ .+.++.+.+++.+++++|+||||+|...+++.+++++++ + |+++.+|.......++++...++. + 
T Consensus       236 Ga~~vi~~~~-~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-  312 (373)
T 1p0f_A          236 GATECLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-  312 (373)
T ss_dssp             TCSEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-
T ss_pred             CCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-
Confidence            9999998763 114688889988877999999999997779999999999 7 999999975543456777777666 6 


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ++.|+.++.+. .++++++++++++|++++     +.|+++++.+|++.+
T Consensus       313 ~i~g~~~~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  361 (373)
T 1p0f_A          313 SLKGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELL  361 (373)
T ss_dssp             EEEECSGGGCC-GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHT
T ss_pred             eEEeeccCCcC-HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHH
Confidence            99998765443 378999999999999973     678999999888654

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=3e-57  Score=440.24  Aligned_cols=354  Identities=43%  Similarity=0.716  Sum_probs=300.7

Q ss_pred             CCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335            9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      ++.+|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++.+.|..+.   .+|.++|||++|+|+++|+
T Consensus         2 ~~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~P~v~GhE~~G~V~~vG~   78 (374)
T 2jhf_A            2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGE   78 (374)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECT
T ss_pred             CCCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC---CCCcccCcCceEEEEEECC
Confidence            4567899999999999867999999999999999999999999999999999886543   3789999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +|++|++||||++.+...|+.|.+|++|++++|++.......|+..+|..++. .+|.++++++..|+|+||+.+|++.+
T Consensus        79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~  157 (374)
T 2jhf_A           79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISV  157 (374)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCccccc-ccccccccccCCccCeeEEEEchHHe
Confidence            99999999999999999999999999999999998653211244333321110 12223344444579999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +++|+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+
T Consensus       158 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa  237 (374)
T 2jhf_A          158 AKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA  237 (374)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence            99999999999999999999999988888899999999999999999999999999998789999999999999999999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCC-ceEEEEcccCCCCccccCHHHHhh-CcEE
Q 017335          249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILK-GRSV  326 (373)
Q Consensus       249 ~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  326 (373)
                      ++++|+++ ...++.+.+++.+++++|+|||++|...+++.+++++++ + |+++.+|.......++++...++. + ++
T Consensus       238 ~~vi~~~~-~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i  314 (374)
T 2jhf_A          238 TECVNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TW  314 (374)
T ss_dssp             SEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EE
T ss_pred             ceEecccc-cchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eE
Confidence            99998763 114688888888877999999999997779999999999 7 999999975543456677777666 7 99


Q ss_pred             EEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          327 CGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .|+.++.+...++++++++++++|++++     +.|+++++.+|++.+
T Consensus       315 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  362 (374)
T 2jhf_A          315 KGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLL  362 (374)
T ss_dssp             EECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHH
T ss_pred             EEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHH
Confidence            9987665544678999999999999974     678999999887653

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.8e-57  Score=440.32  Aligned_cols=353  Identities=44%  Similarity=0.735  Sum_probs=298.9

Q ss_pred             CcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      ..|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++.+.|..+..  .+|.++|||++|+|+++|++|
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~V   79 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG--CFPVILGHLGAGIVESVGEGV   79 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC--CSSBCCCCEEEEEEEEECTTC
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCC--CCCccccccccEEEEEECCCC
Confidence            357899999999998679999999999999999999999999999999999876544  689999999999999999999


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      ++|++||||++.+...|+.|.+|++|++++|++.......|+..+|..++. .+|..+++++..|+|+||+.+|++.+++
T Consensus        80 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~  158 (373)
T 2fzw_A           80 TKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAK  158 (373)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCccccc-ccccccccccCCccceeEEEEchhheEE
Confidence            999999999999999999999999999999987532100133222211110 1223334444457999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +|+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++
T Consensus       159 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  238 (373)
T 2fzw_A          159 IDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE  238 (373)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence            99999999999999999999998888889999999999999999999999999999878999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCC-ceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335          251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILK-GRSVCG  328 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  328 (373)
                      ++++++ ...++.+.+++.+++++|+|||++|....++.+++++++ + |+++.+|.......++++...++. + +++|
T Consensus       239 vi~~~~-~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  315 (373)
T 2fzw_A          239 CINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKG  315 (373)
T ss_dssp             EECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             Eecccc-ccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEE
Confidence            998763 114688888888877999999999997779999999999 7 999999975543456677777666 7 9999


Q ss_pred             eecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          329 TYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +.++.+...++++++++++++|++++     +.|+++++.+|++.+
T Consensus       316 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~  361 (373)
T 2fzw_A          316 TAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELM  361 (373)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHH
T ss_pred             eccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHH
Confidence            87665545688999999999999974     678999999887653

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.4e-57  Score=437.50  Aligned_cols=353  Identities=43%  Similarity=0.736  Sum_probs=300.1

Q ss_pred             CCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchh-cccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335            9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      ++.+|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++ .+.|..+ .  .+|.++|||++|+|+++|
T Consensus         2 ~~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~--~~P~v~GhE~~G~V~~vG   78 (374)
T 1cdo_A            2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-D--GFPVVLGHEGAGIVESVG   78 (374)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-T--SCSEECCCCEEEEEEEEC
T ss_pred             CCCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-C--CCCcccCccceEEEEEEC
Confidence            45678899999999998679999999999999999999999999999999 8888765 3  689999999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      ++|++|++||||++.+...|+.|.+|++|++++|++.......|+..+|..++ ..+|.+++++...|+|+||+.+|++.
T Consensus        79 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~  157 (374)
T 1cdo_A           79 PGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIA  157 (374)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCE-EETTEEEEEGGGTCCSBSEEEEEGGG
T ss_pred             CCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCcccc-ccCCcccccccCCccceeEEEEchhh
Confidence            99999999999999999999999999999999998765321123333332111 01222334444457999999999999


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      ++++|+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+++|++++++++++++++++|
T Consensus       158 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG  237 (374)
T 1cdo_A          158 VAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG  237 (374)
T ss_dssp             EEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT
T ss_pred             eEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhC
Confidence            99999999999999999999999998888889999999999999999999999999999878999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCC-ceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILK-GRS  325 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-~~~  325 (373)
                      +++++++++ .+.++.+.+++.+++++|+|||++|....++.+++++++ + |+++.+|.... ..++++...++. + +
T Consensus       238 a~~vi~~~~-~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~  313 (374)
T 1cdo_A          238 ATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-T  313 (374)
T ss_dssp             CCEEECGGG-CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-E
T ss_pred             CceEEeccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-e
Confidence            999998763 114688888888877999999999997779999999999 7 99999998543 455677777766 6 9


Q ss_pred             EEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +.|+.++.+...++++++++++++|++++     +.|+++++++|++.+
T Consensus       314 i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~  362 (374)
T 1cdo_A          314 WKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLM  362 (374)
T ss_dssp             EEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHH
T ss_pred             EEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHH
Confidence            99987665545678999999999999974     678999999887643

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=5.3e-57  Score=438.81  Aligned_cols=352  Identities=38%  Similarity=0.678  Sum_probs=297.1

Q ss_pred             CCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335            9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      ++..|++|||+++.+++.+++++++|.|+|+++||||||.+++||++|++.+.|. +..  .+|.++|||++|+|+++|+
T Consensus         2 ~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~--~~P~v~GhE~~G~V~~vG~   78 (376)
T 1e3i_A            2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKA--LFPVVLGHECAGIVESVGP   78 (376)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCC--CSSBCCCCEEEEEEEEECT
T ss_pred             CCCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCC--CCCcccCccccEEEEEECC
Confidence            3557899999999999866999999999999999999999999999999999886 333  6899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCC----CCCCCCCCCCCccccccCCceecccccccceeeeEEee
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR----GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD  164 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~----~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  164 (373)
                      +|++|++||||++.+...|+.|.+|++|++++|++...    ....|+..+|..++ ..+|.++.+++..|+|+||+.+|
T Consensus        79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~  157 (376)
T 1e3i_A           79 GVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF-TCKGRSIYHFMGVSSFSQYTVVS  157 (376)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEE
T ss_pred             CCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCcccc-ccCCcccccccCCccceeEEEec
Confidence            99999999999999999999999999999999987541    00013322221111 01122333333457999999999


Q ss_pred             ccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       165 ~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      ++.++++|+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+++|++++++++++++++
T Consensus       158 ~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  237 (376)
T 1e3i_A          158 EANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK  237 (376)
T ss_dssp             GGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             cccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            99999999999999999999999999998888889999999999999999999999999999978999999999999999


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCC-ceEEEEcccCCCCccccCHHHHhh-
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILK-  322 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~~~~~~~~-  322 (373)
                      ++|+++++|+++ .+.++.+.+++.+++++|+|||++|....++.+++++++ + |+++.+|..  ....+++...++. 
T Consensus       238 ~lGa~~vi~~~~-~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~--~~~~~~~~~~~~~~  313 (376)
T 1e3i_A          238 ALGATDCLNPRE-LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAK--VDEMTIPTVDVILG  313 (376)
T ss_dssp             HTTCSEEECGGG-CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCS--SSEEEEEHHHHHTT
T ss_pred             HhCCcEEEcccc-ccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCC--CCccccCHHHhhcc
Confidence            999999998763 114688888888877999999999997779999999999 7 999999973  3345677777766 


Q ss_pred             CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          323 GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      + ++.|+.++.+...++++++++++++|++++     +.|+++++++|++.+
T Consensus       314 ~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  364 (376)
T 1e3i_A          314 R-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLM  364 (376)
T ss_dssp             C-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHH
T ss_pred             C-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHH
Confidence            7 999987655444688999999999999974     678999999887653

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.8e-57  Score=439.08  Aligned_cols=349  Identities=27%  Similarity=0.500  Sum_probs=294.1

Q ss_pred             ccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      +++|||+++.+++++++++++|.|+|+++||||||.++|||++|++.+.|.++.   .+|.++|||++|+|+++|++|++
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~P~v~GhE~~G~V~~vG~~v~~   80 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV---PLPAVLGHEGSGIIEAIGPNVTE   80 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSBCCCCEEEEEEEEECTTCCS
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCCC---CCCcccCcccceEEEEeCCCCCC
Confidence            467999999998866999999999999999999999999999999999987552   68999999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCcee-cccccccceeeeEEeeccceEEc
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVI-HHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~-~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      |++||||++.+ ..|+.|++|++|++++|++.......|...+|..++...+|..+ .+++..|+|+||+.+|++.++++
T Consensus        81 ~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~i  159 (371)
T 1f8f_A           81 LQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  159 (371)
T ss_dssp             CCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             CCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEEC
Confidence            99999999999 99999999999999999875420011222222111100001011 11223469999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      |+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+++|++++++++++++++++|++++
T Consensus       160 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  239 (371)
T 1f8f_A          160 TKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV  239 (371)
T ss_dssp             CTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE
T ss_pred             CCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEE
Confidence            99999999999999999999988788899999999999999999999999999999679999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      +++++   .++.+.+++.+++++|+|||++|....++.++++++++ |+++.+|........+++...++. ++++.|+.
T Consensus       240 i~~~~---~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  315 (371)
T 1f8f_A          240 INSKT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVV  315 (371)
T ss_dssp             EETTT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECS
T ss_pred             ecCCc---cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeC
Confidence            99887   78889999888779999999999977799999999997 999999986543456777777666 99999987


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC----CcccccCCCcccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~~~  369 (373)
                      .+.....++++++++++++|++++    ..|+++++.+|++.+
T Consensus       316 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~l~~~~~A~~~~  358 (371)
T 1f8f_A          316 EGSGSPKKFIPELVRLYQQGKFPFDQLVKFYAFDEINQAAIDS  358 (371)
T ss_dssp             GGGSCHHHHHHHHHHHHHTTSCCGGGGEEEEEGGGHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHcCCCCcccceeEecHHHHHHHHHHH
Confidence            665444578999999999999975    238999999888654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=6.1e-57  Score=437.46  Aligned_cols=323  Identities=22%  Similarity=0.369  Sum_probs=293.0

Q ss_pred             CcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      .+|.+|||+++.+++. ++++++|.|+|++|||||||.+++||++|++.+.|.++.   .+|.++|||++|+|+++|++|
T Consensus        19 ~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~---~~p~v~G~e~~G~V~~vG~~v   94 (370)
T 4ej6_A           19 YFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPS---TPPVTLGHEFCGIVVEAGSAV   94 (370)
T ss_dssp             --CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSEECCCSEEEEEEEECTTC
T ss_pred             ccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCCC---CCCeecCcceEEEEEEECCCC
Confidence            5788999999999976 999999999999999999999999999999999987643   689999999999999999999


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      ++|++||||++.+...|+.|.+|+.|++++|++...   .|+..+|                   +|+||+++|++.+++
T Consensus        95 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~  152 (370)
T 4ej6_A           95 RDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIHRDG-------------------GFAEYVLVPRKQAFE  152 (370)
T ss_dssp             CSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccc---cCCCCCC-------------------cceEEEEEchhhEEE
Confidence            999999999999999999999999999999998765   6666677                   999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +|+++++++|+ +..++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++
T Consensus       153 ~P~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~  230 (370)
T 4ej6_A          153 IPLTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA  230 (370)
T ss_dssp             ECTTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE
T ss_pred             CCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE
Confidence            99999999998 556999999976 8899999999999999999999999999999988999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHH---hcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE
Q 017335          251 FINPATCGDKTVSQVIKE---MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV  326 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~---~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  326 (373)
                      ++|+++   .++.+.+++   ++++++|+||||+|...+++.++++++++ |+++.+|........+++...++. ++++
T Consensus       231 vi~~~~---~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i  306 (370)
T 4ej6_A          231 TVDPSA---GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRV  306 (370)
T ss_dssp             EECTTS---SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEE
T ss_pred             EECCCC---cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEE
Confidence            999987   889999988   77779999999999887799999999997 999999986554567888888877 9999


Q ss_pred             EEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          327 CGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .|+....    .+++++++++++|++++     +.|+++++.+|++.+
T Consensus       307 ~g~~~~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  350 (370)
T 4ej6_A          307 LGSFINP----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNP  350 (370)
T ss_dssp             EECCSCT----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSC
T ss_pred             EEeccCh----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHH
Confidence            9986543    56999999999999965     678999999988765

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.8e-56  Score=427.11  Aligned_cols=320  Identities=26%  Similarity=0.375  Sum_probs=289.9

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      +|||+++++++++++++++|.|+|++|||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|++|++|+
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~P~v~G~E~~G~V~~vG~~v~~~~   80 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKP-TLPFIPGHEGVGYVSAVGSGVSRVK   80 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCSEEEEEEEEECSSCCSCC
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCC-CCCcccCCcceEEEEEECCCCCcCC
Confidence            599999999887799999999999999999999999999999999999876432 6899999999999999999999999


Q ss_pred             CCCEEE-eeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           95 ERDLVL-PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        95 ~Gd~V~-~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      +||||+ ..+...|+.|.+|+.|++++|.+...   .|+..+|                   +|+||+.+|++.++++|+
T Consensus        81 vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~  138 (340)
T 3s2e_A           81 EGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYSVNG-------------------GYGEYVVADPNYVGLLPD  138 (340)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEECCT
T ss_pred             CCCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCCCCC-------------------cceeEEEechHHEEECCC
Confidence            999994 55678899999999999999998775   6667777                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++|+.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++|
T Consensus       139 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~  216 (340)
T 3s2e_A          139 KVGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVN  216 (340)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            999999999999999999976 77899999999999999999999999999999 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      +++   .++.+.+.+ +.+++|+|||++|....++.++++++++ |+++.+|...  ...+++...++. ++++.|+..+
T Consensus       217 ~~~---~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~  289 (340)
T 3s2e_A          217 ARD---TDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPP--GDFGTPIFDVVLKGITIRGSIVG  289 (340)
T ss_dssp             TTT---SCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCS--SEEEEEHHHHHHTTCEEEECCSC
T ss_pred             CCC---cCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCC--CCCCCCHHHHHhCCeEEEEEecC
Confidence            988   788888888 4458999999999988899999999997 9999999754  345677777666 9999998765


Q ss_pred             CCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          333 GLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      .   .++++++++++++|++++  +.|+++++++|+..+
T Consensus       290 ~---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  325 (340)
T 3s2e_A          290 T---RSDLQESLDFAAHGDVKATVSTAKLDDVNDVFGRL  325 (340)
T ss_dssp             C---HHHHHHHHHHHHTTSCCCCEEEECGGGHHHHHHHH
T ss_pred             C---HHHHHHHHHHHHhCCCCceEEEEeHHHHHHHHHHH
Confidence            4   689999999999999987  778999999888654

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.4e-56  Score=429.79  Aligned_cols=324  Identities=23%  Similarity=0.357  Sum_probs=282.1

Q ss_pred             CCCCcccceeeEEeecCCCCeEEEEEecCC-CCCCeEEEEEeeeeccccchhcccCCCC---CCCCCCCccccCcccEEE
Q 017335            8 PKAGKVIRCKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTD---LPKLPLPVIFGHEAVGVV   83 (373)
Q Consensus         8 ~~~~~~~~~ka~~~~~~~~~l~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~~~p~~~G~e~~G~V   83 (373)
                      +....|++|||+++++++.+++++++|.|+ |+++||||||.++|||++|++.+.|.++   ..  .+|.++|||++|+|
T Consensus         8 ~~~~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~--~~p~v~G~E~~G~V   85 (359)
T 1h2b_A            8 SQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQP--KLPYTLGHENVGYI   85 (359)
T ss_dssp             ---------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCC--CSSEECCCCEEEEE
T ss_pred             hhcCChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCC--CCCeecCcCceEEE
Confidence            344467889999999998669999999999 9999999999999999999999998754   23  68999999999999


Q ss_pred             EEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEe
Q 017335           84 ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV  163 (373)
Q Consensus        84 ~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v  163 (373)
                      +++|++|++|++||||+..+...|+.|.+|+.|++++|++...   .|+..+|                   +|+||+.+
T Consensus        86 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v  143 (359)
T 1h2b_A           86 EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFAEFMRT  143 (359)
T ss_dssp             EEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEE
T ss_pred             EEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccCCCC-------------------cccceEEe
Confidence            9999999999999999998889999999999999999988754   5665566                   99999999


Q ss_pred             eccceEEcCCCCChhhhh---ccchhhhhHHHHHHHH-hCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChh
Q 017335          164 DITHVVKITPHIPLGIAC---LLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPE  238 (373)
Q Consensus       164 ~~~~~~~lP~~l~~~~aa---~l~~~~~ta~~~~~~~-~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~  238 (373)
                      |++.++++|+++++++|+   .+++++.|||+++.+. .++++|++|||+|+|++|++++|+||.+ |+ +|++++++++
T Consensus       144 ~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~  222 (359)
T 1h2b_A          144 SHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEE  222 (359)
T ss_dssp             CGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHH
T ss_pred             chHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHH
Confidence            999999999999999999   7888899999977655 8999999999999999999999999999 99 8999999999


Q ss_pred             HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHH--HHHHHHHHhccCCceEEEEcccCCCCcccc
Q 017335          239 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTS--VMNDAFNSSREGWGKTVILGVEMHGSPISL  315 (373)
Q Consensus       239 ~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~--~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~  315 (373)
                      ++++++++|+++++|+++   . +.+.+++++++ ++|+|||++|.+.  .++.++++  ++ |+++.+|....  . ++
T Consensus       223 ~~~~~~~lGa~~vi~~~~---~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~--~-~~  292 (359)
T 1h2b_A          223 KLKLAERLGADHVVDARR---D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGE--L-RF  292 (359)
T ss_dssp             HHHHHHHTTCSEEEETTS---C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSC--C-CC
T ss_pred             HHHHHHHhCCCEEEeccc---h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCC--C-CC
Confidence            999999999999999887   5 88888888887 8999999999985  68888887  86 99999997543  2 66


Q ss_pred             CHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          316 NSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       316 ~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      +...++. ++++.|+..+.   .++++++++++++|++++  +.|+++++++|++.+
T Consensus       293 ~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~~l~~~~~A~~~~  346 (359)
T 1h2b_A          293 PTIRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRVEVDIHKLDEINDVLERL  346 (359)
T ss_dssp             CHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCCEEEEEGGGHHHHHHHH
T ss_pred             CHHHHHhCCcEEEEecCCC---HHHHHHHHHHHHcCCCcceEEEEeHHHHHHHHHHH
Confidence            7666666 99999986543   688999999999999976  789999999887654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=5.2e-55  Score=419.87  Aligned_cols=322  Identities=21%  Similarity=0.319  Sum_probs=285.8

Q ss_pred             eeeEEeecCCCCeEEEEEecCC-CCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||++++++|. ++++|+|.|+ +++|||||||.++|||++|++.+.+..+.   .+|+++|||++|+|+++|++|++++
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~---~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH---YYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS---SSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC---CCCccccEEEEEEEEEECCCccccc
Confidence            89999999998 9999999998 57999999999999999999998887554   6899999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||||++.+...|+.|.+|+.|++++|.+...   .|...+|                   +|+||+.+|+++++++|++
T Consensus        77 ~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  134 (346)
T 4a2c_A           77 PGDAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSRRDG-------------------GFAEYIVVKRKNVFALPTD  134 (346)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEEEGGGEEECCTT
T ss_pred             CCCeEEeeeccCCCCcccccCCccccCCCccc---ccCCCCc-------------------ccccccccchheEEECCCC
Confidence            99999999999999999999999999998776   6777777                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++||+++ ++.+++. +.+...+++|++|||+|+|++|++++|+||++|+..+++++++++|+++++++|+++++|+
T Consensus       135 l~~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~  212 (346)
T 4a2c_A          135 MPIEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNS  212 (346)
T ss_dssp             SCGGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeC
Confidence            9999999876 6666666 6788899999999999999999999999999999778899999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc-ccCHHHHhh-CcEEEEeec
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~~-~~~i~g~~~  331 (373)
                      ++   .++.+.++.++++ ++|+|+|++|.+.+++.++++++++ |+++.+|.......+ +++...++. +++++|+..
T Consensus       213 ~~---~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~  288 (346)
T 4a2c_A          213 SE---MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWM  288 (346)
T ss_dssp             TT---SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCT
T ss_pred             CC---CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEec
Confidence            98   7888888888877 8999999999998899999999997 999999986543322 334445555 999999875


Q ss_pred             CCCC--chhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          332 GGLK--PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       332 ~~~~--~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      +...  ..++++++++++++|++++     +.|+++++++|++.+
T Consensus       289 ~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l  333 (346)
T 4a2c_A          289 NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDI  333 (346)
T ss_dssp             TCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHH
T ss_pred             cccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHH
Confidence            4432  3578999999999999975     568899999888754

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=4.3e-55  Score=421.09  Aligned_cols=323  Identities=24%  Similarity=0.328  Sum_probs=273.1

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccC-CCC--CCCCCCCccccCcccEEEEEeCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STD--LPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g-~~~--~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      |+++|||+++.+++..++++++|.|+|+++||||||.++|||++|++.+.| .++  ..  .+|.++|||++|+|+++|+
T Consensus         1 ~m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~--~~p~v~G~E~~G~V~~vG~   78 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRI--KPPQIMGHEVAGEVVEIGP   78 (348)
T ss_dssp             --CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHC--CSSEECCCEEEEEEEEECT
T ss_pred             CCCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccC--CCCCccCccceEEEEEECC
Confidence            356799999999984499999999999999999999999999999999988 432  12  6889999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +|++|++||||++.+...|+.|.+|++|++++|++...   .|...+|                   +|+||+.+|++.+
T Consensus        79 ~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~  136 (348)
T 2d8a_A           79 GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------VFAEYAVVPAQNI  136 (348)
T ss_dssp             TCCSCCTTCEEEECCEECCSCCC------------CEE---TTTSSCC-------------------SSBSEEEEEGGGE
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCCCCC-------------------cCcceEEeChHHe
Confidence            99999999999999999999999999999999988764   5555566                   9999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +++|+++++++|++++ +++|||+++ +..++ +|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+
T Consensus       137 ~~iP~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga  213 (348)
T 2d8a_A          137 WKNPKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA  213 (348)
T ss_dssp             EECCTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC
T ss_pred             EECCCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence            9999999999999886 889999976 77888 99999999999999999999999998789999999999999999999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH-HHHhh-CcE
Q 017335          249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILK-GRS  325 (373)
Q Consensus       249 ~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~-~~~  325 (373)
                      ++++++++   .++.+.+.+.+++ ++|+|||++|....++.++++++++ |+++.+|....  ..+++. ..++. +++
T Consensus       214 ~~~~~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~  287 (348)
T 2d8a_A          214 DYVINPFE---EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPG--KVTIDFNNLIIFKALT  287 (348)
T ss_dssp             SEEECTTT---SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHTTTTTCE
T ss_pred             CEEECCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CcccCchHHHHhCCcE
Confidence            99999887   7899999999887 8999999999977799999999997 99999997533  456776 66655 999


Q ss_pred             EEEeecCCCCchhHHHHHHHHHHcCCCCC-----Cccc-ccCCCcccccc
Q 017335          326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFH-LCDPNSDSAGL  369 (373)
Q Consensus       326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~-~~~~~~a~~~~  369 (373)
                      +.|+....  ..++++++++++++|++++     +.|+ ++++++|++.+
T Consensus       288 i~g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~  335 (348)
T 2d8a_A          288 IYGITGRH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELM  335 (348)
T ss_dssp             EEECCCCC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHH
T ss_pred             EEEecCCC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHH
Confidence            99985432  1578999999999999753     5789 99999887643

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=4.2e-55  Score=420.62  Aligned_cols=324  Identities=25%  Similarity=0.392  Sum_probs=284.7

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++++++++++++++|.|+|++|||||||.++|||++|++.+.|.++.....+|.++|||++|+|+++|++|++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            89999999998899999999999999999999999999999999998764322278999999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCc-cCCCC-CCCCCCCCCCccccccCCceecccccccceeeeEEee-ccceEEcC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCS-KFGRG-YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKIT  172 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~-~~~~~-~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~lP  172 (373)
                      ||||++.+...|+.|.+|+.|++++|. +.... ...|+..+|                   +|+||+.+| ++.++++|
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~~~~~~p  141 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPG-------------------SMAEYMIVDSARHLVPIG  141 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCC-------------------SSBSEEEESCGGGEEECT
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCc-------------------eeeEEEEecchhceEeCC
Confidence            999999999999999999999999994 32211 013444455                   999999999 99999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHH-HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      + +++++|+.++++++|||+++.+ ...+++|++|||+|+|++|++++|+||.+|..+|++++++++++++++++|++++
T Consensus       142 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~  220 (345)
T 3jv7_A          142 D-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAA  220 (345)
T ss_dssp             T-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEE
T ss_pred             C-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence            9 9999999999999999998766 4589999999999999999999999999954499999999999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      +++++    ++.+.+++++++ ++|+||||+|.+.+++.++++++++ |+++.+|.... ...+++. .++. ++++.|+
T Consensus       221 i~~~~----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~-~~~~~~~~i~g~  293 (345)
T 3jv7_A          221 VKSGA----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAG-AHAKVGF-FMIPFGASVVTP  293 (345)
T ss_dssp             EECST----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTT-CCEEEST-TTSCTTCEEECC
T ss_pred             EcCCC----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCC-CCCCcCH-HHHhCCCEEEEE
Confidence            98864    788899999988 9999999999987799999999997 99999998543 2445664 4444 9999998


Q ss_pred             ecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          330 YFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      ..+.   .++++++++++++|++++  +.|+++++++|++.+
T Consensus       294 ~~~~---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  332 (345)
T 3jv7_A          294 YWGT---RSELMEVVALARAGRLDIHTETFTLDEGPAAYRRL  332 (345)
T ss_dssp             CSCC---HHHHHHHHHHHHTTCCCCCEEEECSTTHHHHHHHH
T ss_pred             ecCC---HHHHHHHHHHHHcCCCceEEEEEcHHHHHHHHHHH
Confidence            7554   689999999999999987  889999999988754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.5e-55  Score=421.60  Aligned_cols=324  Identities=23%  Similarity=0.296  Sum_probs=285.0

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchh-cccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||++++++++ ++++++|.|+|+++||||||.+++||++|++ ++.|..+.   .+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~---~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC---CSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC---CCCcccCCcceEEEEEECCCCCcCC
Confidence            89999999998 9999999999999999999999999999999 55776553   5899999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT  172 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP  172 (373)
                      +||||++.+...|+.|.+|+.|++++|.........|...+|                   +|+||+.+|+.  .++++|
T Consensus        77 vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G-------------------~~aey~~v~~~~~~~~~iP  137 (352)
T 3fpc_A           77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDG-------------------VFGEFFHVNDADMNLAHLP  137 (352)
T ss_dssp             TTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCC-------------------SSBSCEEESSHHHHCEECC
T ss_pred             CCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCC-------------------cccceEEeccccCeEEECC
Confidence            999999999999999999999999999775443233444556                   99999999976  999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++|++++.+++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++
T Consensus       138 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  216 (352)
T 3fpc_A          138 KEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDII  216 (352)
T ss_dssp             TTSCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred             CCCCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEE
Confidence            9999999999999999999976 889999999999999999999999999999997899999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH---hhCcEEEE
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSVCG  328 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~---~~~~~i~g  328 (373)
                      ++++   .++.+.+++.+++ ++|+|||++|.+.+++.++++++++ |+++.+|.......++++...+   ++++++.|
T Consensus       217 ~~~~---~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g  292 (352)
T 3fpc_A          217 NYKN---GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHG  292 (352)
T ss_dssp             CGGG---SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEE
T ss_pred             cCCC---cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEE
Confidence            9987   8899999999988 8999999999976699999999997 9999999865444445444332   23788888


Q ss_pred             eecCCCCchhHHHHHHHHHHcCCCCC-----Cccc-ccCCCcccccc
Q 017335          329 TYFGGLKPRSDIATLAQKYLDKVHLR-----SSFH-LCDPNSDSAGL  369 (373)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~-~~~~~~a~~~~  369 (373)
                      +...  ...++++++++++++|++++     +.|+ ++++++|+..+
T Consensus       293 ~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~  337 (352)
T 3fpc_A          293 GLCP--GGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLM  337 (352)
T ss_dssp             BCCC--CHHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHH
T ss_pred             eecc--CchhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHH
Confidence            7532  22578999999999999986     5677 99998887654

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=2e-54  Score=417.66  Aligned_cols=325  Identities=18%  Similarity=0.292  Sum_probs=280.7

Q ss_pred             ccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      .|+|||+++.+++. ++++++|.|+|+++||||||.++|||++|++.+.+.. ......+|.++|||++|+|+++|++|+
T Consensus         5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            46799999999876 9999999999999999999999999999999887432 110015789999999999999999999


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +|++||||++.+...|+.|++|+.|++++|++...   .|.. .+|                   +|+||+.+|++.+++
T Consensus        84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-------------------~~aey~~v~~~~~~~  141 (356)
T 1pl8_A           84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG-------------------NLCRFYKHNAAFCYK  141 (356)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCCCCC-------------------ccccEEEeehHHEEE
Confidence            99999999999999999999999999999988654   4442 345                   999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +|+++++++|+++ .+++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++
T Consensus       142 iP~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~  219 (356)
T 1pl8_A          142 LPDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL  219 (356)
T ss_dssp             CCTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE
T ss_pred             CcCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE
Confidence            9999999999876 4889999976 7889999999999999999999999999999988999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      +++++...+.++.+.+.+.+++++|+|||++|....++.++++++++ |+++.+|...  ...+++...++. ++++.|+
T Consensus       220 vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~  296 (356)
T 1pl8_A          220 VLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGV  296 (356)
T ss_dssp             EEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEEC
T ss_pred             EEcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHhcceEEEEe
Confidence            99987200157778888877668999999999987799999999997 9999999733  345677777666 9999998


Q ss_pred             ecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          330 YFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ...    .++++++++++++|++++     +.|+++++++|++.+
T Consensus       297 ~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  337 (356)
T 1pl8_A          297 FRY----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETF  337 (356)
T ss_dssp             CSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHH
T ss_pred             ccc----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHH
Confidence            543    367999999999999864     678999999887643

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.9e-54  Score=413.86  Aligned_cols=319  Identities=27%  Similarity=0.402  Sum_probs=283.7

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++++++.+++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|++|++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~GhE~~G~V~~vG~~v~~~~v   79 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP-KLPLIPGHEGVGIVEEVGPGVTHLKV   79 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCC-CCCeeccccceEEEEEECCCCCcCCC
Confidence            89999999985699999999999999999999999999999999988765321 68999999999999999999999999


Q ss_pred             CCEEEeeCCC-CCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           96 RDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        96 Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      ||||++.+.. .|+.|++|+.|++++|++...   .|+..+|                   +|+||+.+|++.++++|++
T Consensus        80 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~~P~~  137 (339)
T 1rjw_A           80 GDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDN  137 (339)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTT
T ss_pred             CCEEEEecCCCCCCCCchhhCcCcccCCCcce---eecCCCC-------------------cceeeEEechHHEEECCCC
Confidence            9999987654 599999999999999987654   4555566                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++|+.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++|+
T Consensus       138 ~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~  215 (339)
T 1rjw_A          138 LSFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP  215 (339)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecC
Confidence            9999999999999999997654 589999999999998899999999999999 99999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      ++   .++.+.+.+.+ +++|+|||++|....++.++++++++ |+++.+|....  .++++...++. ++++.|+..+.
T Consensus       216 ~~---~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~  288 (339)
T 1rjw_A          216 LK---EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE--EMPIPIFDTVLNGIKIIGSIVGT  288 (339)
T ss_dssp             TT---SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC
T ss_pred             CC---ccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCC--CCccCHHHHHhCCcEEEEeccCC
Confidence            86   67888888877 68999999999977799999999997 99999997543  35677766666 99999986543


Q ss_pred             CCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          334 LKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                         .++++++++++++|++++  +.|+++++++|++.+
T Consensus       289 ---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  323 (339)
T 1rjw_A          289 ---RKDLQEALQFAAEGKVKTIIEVQPLEKINEVFDRM  323 (339)
T ss_dssp             ---HHHHHHHHHHHHTTSCCCCEEEEEGGGHHHHHHHH
T ss_pred             ---HHHHHHHHHHHHcCCCCccEEEEcHHHHHHHHHHH
Confidence               688999999999999986  779999999887643

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=5.7e-55  Score=420.26  Aligned_cols=324  Identities=19%  Similarity=0.252  Sum_probs=275.6

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      |+++|||+++.+++++++++++|.|+|+++||||||.++|||++|++.+.|..+..  .+|.++|||++|+|+++|++|+
T Consensus         1 M~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~V~~vG~~v~   78 (348)
T 3two_A            1 MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEG--IYPMIPGHEIAGIIKEVGKGVK   78 (348)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCC--CSSBCCCCCEEEEEEEECTTCC
T ss_pred             CceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCC--CCCeecCcceeEEEEEECCCCC
Confidence            45789999999998779999999999999999999999999999999999887665  7899999999999999999999


Q ss_pred             ccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           92 EVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        92 ~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +|++||||++.+. ..|+.|.+|+.|++++|. ...   .|+..+.        . .-......|+|+||+.+|++.+++
T Consensus        79 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~---~~~~~~~--------~-~~~~~~~~G~~aey~~v~~~~~~~  145 (348)
T 3two_A           79 KFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVV---FTYDCLD--------S-FHDNEPHMGGYSNNIVVDENYVIS  145 (348)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCE---ESSSSEE--------G-GGTTEECCCSSBSEEEEEGGGCEE
T ss_pred             CCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccc---ccccccc--------c-cccCCcCCccccceEEechhhEEE
Confidence            9999999988664 789999999999999998 222   2222220        0 000001124999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +|+++++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++
T Consensus       146 iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  223 (348)
T 3two_A          146 VDKNAPLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKH  223 (348)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSE
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCe
Confidence            999999999999999999999976 55699999999999999999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHh-h-CcEEE
Q 017335          251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEIL-K-GRSVC  327 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~-~-~~~i~  327 (373)
                      ++ .+.   ..+        ..++|+|||++|+...++.++++++++ |+++.+|..... ..+ ++...++ . ++++.
T Consensus       224 v~-~~~---~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~  289 (348)
T 3two_A          224 FY-TDP---KQC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVE-VAPVLSVFDFIHLGNRKVY  289 (348)
T ss_dssp             EE-SSG---GGC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGG-GCCEEEHHHHHHTCSCEEE
T ss_pred             ec-CCH---HHH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCC-CcccCCHHHHHhhCCeEEE
Confidence            98 332   211        118999999999985599999999997 999999975412 233 6666666 5 99999


Q ss_pred             EeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          328 GTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       328 g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      |+..+.   .+++.++++++++|++++  +.|+++++++|+..+
T Consensus       290 g~~~~~---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  330 (348)
T 3two_A          290 GSLIGG---IKETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNL  330 (348)
T ss_dssp             ECCSCC---HHHHHHHHHHHHHTTCCCCEEEECGGGHHHHHHHH
T ss_pred             EEecCC---HHHHHHHHHHHHhCCCCceEEEEEHHHHHHHHHHH
Confidence            997655   688999999999999987  789999999988754

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.1e-54  Score=415.70  Aligned_cols=323  Identities=23%  Similarity=0.339  Sum_probs=277.5

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccC-CCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      |+++|||+++++++. ++++++|.|+|+++||||||.++|||++|++.+.+ ........+|.++|||++|+|+++|++|
T Consensus         1 m~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v   79 (352)
T 1e3j_A            1 MASDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV   79 (352)
T ss_dssp             ---CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred             CcccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCC
Confidence            456799999999876 99999999999999999999999999999998874 3221111578999999999999999999


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  169 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  169 (373)
                      ++|++||||++.+...|+.|++|+.|++++|++...   .|.. .+|                   +|+||+.+|+++++
T Consensus        80 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~G-------------------~~aey~~v~~~~~~  137 (352)
T 1e3j_A           80 KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPPDDG-------------------NLARYYVHAADFCH  137 (352)
T ss_dssp             CSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEE
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCCCCc-------------------cceeEEEeChHHeE
Confidence            999999999999999999999999999999988654   3442 345                   99999999999999


Q ss_pred             EcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       170 ~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      ++|+++++++|+++. +++|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++
T Consensus       138 ~iP~~~~~~~aa~~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~  214 (352)
T 1e3j_A          138 KLPDNVSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGAD  214 (352)
T ss_dssp             ECCTTSCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCS
T ss_pred             ECcCCCCHHHHHhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCC
Confidence            999999999999764 889999976 78899999999999999999999999999999 799999999999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcC---C-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          250 DFINPATCGDKTVSQVIKEMTD---G-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~---~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      +++++++  ..++.+.+.+.++   + ++|+|||++|....++.++++++++ |+++.+|...  ...+++...++. ++
T Consensus       215 ~~~~~~~--~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~  289 (352)
T 1e3j_A          215 VTLVVDP--AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREI  289 (352)
T ss_dssp             EEEECCT--TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTC
T ss_pred             EEEcCcc--cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccccHHHHHhcCc
Confidence            9998762  1466777777775   4 8999999999987799999999997 9999999743  245677767666 89


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ++.|+...    .++++++++++++|++++     +.|+++++++|++.+
T Consensus       290 ~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  335 (352)
T 1e3j_A          290 DIKSVFRY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAA  335 (352)
T ss_dssp             EEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHH
T ss_pred             EEEEeccc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHH
Confidence            99998543    367999999999999764     678999999887643

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2.2e-54  Score=418.45  Aligned_cols=324  Identities=21%  Similarity=0.281  Sum_probs=282.5

Q ss_pred             cccceeeEEeecCCCCeEEEEEecC--------CCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEE
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVE--------PPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGV   82 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p--------~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~   82 (373)
                      ++++|||+++.+++. ++++++|.|        +|+++||||||.++|||++|++.+.+.. ......+|.++|||++|+
T Consensus         5 ~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            678999999999877 999999999        9999999999999999999999887432 211126799999999999


Q ss_pred             EEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeE
Q 017335           83 VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYS  161 (373)
Q Consensus        83 V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~  161 (373)
                      |+++|++|++|++||||++.+...|+.|.+|+.|.++.|.+...   .|.. .+|                   +|+||+
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~~G-------------------~~aey~  141 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPPVPG-------------------LLRRYV  141 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTTSCC-------------------SCBSEE
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCCCCc-------------------cceeEE
Confidence            99999999999999999999999999999999999999998765   4443 455                   999999


Q ss_pred             EeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHH
Q 017335          162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE  241 (373)
Q Consensus       162 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~  241 (373)
                      .+|++.++++|+ +++++||++. +++|||+++ +..++++|++|||+|+|++|++++|+||.+|+++|+++++++++++
T Consensus       142 ~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  218 (363)
T 3m6i_A          142 NHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLK  218 (363)
T ss_dssp             EEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHH
T ss_pred             EEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            999999999999 9999999885 889999976 8899999999999999999999999999999955999999999999


Q ss_pred             HHHHcCCceEEcCCC--CCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH
Q 017335          242 IGKKFGITDFINPAT--CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI  318 (373)
Q Consensus       242 ~~~~lga~~vi~~~~--~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~  318 (373)
                      +++++ +++++++..  ..++++.+.+++.+++ ++|+||||+|++.+++.++++++++ |+++.+|....  ..+++..
T Consensus       219 ~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~  294 (363)
T 3m6i_A          219 FAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKN--EIQIPFM  294 (363)
T ss_dssp             HHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCS--CCCCCHH
T ss_pred             HHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCC--CccccHH
Confidence            99999 766665431  1126788999999987 9999999999987799999999997 99999997543  3457777


Q ss_pred             HHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          319 EILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       319 ~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      .++. ++++.|+...    .++++++++++++|++++     +.|+++++++|++.+
T Consensus       295 ~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~  347 (363)
T 3m6i_A          295 RASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETA  347 (363)
T ss_dssp             HHHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHH
T ss_pred             HHHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHH
Confidence            7776 9999998643    478999999999999964     678999999988654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.9e-54  Score=413.00  Aligned_cols=326  Identities=25%  Similarity=0.355  Sum_probs=286.8

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      +|.+|||+++++++.+++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|++|+
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~vG~~v~   80 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPV-KLPLVGGHEGAGVVVGMGENVK   80 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSEECCCEEEEEEEEECTTCC
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCC-CCCcccCccceEEEEEECCCCC
Confidence            678899999999985699999999999999999999999999999999988765321 6899999999999999999999


Q ss_pred             ccCCCCEEEeeCCC-CCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           92 EVKERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +|++||||++.+.. .|+.|++|+.|++++|++...   .|+..+|                   +|+||+.+|++.+++
T Consensus        81 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~  138 (347)
T 2hcy_A           81 GWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYTHDG-------------------SFQQYATADAVQAAH  138 (347)
T ss_dssp             SCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEETTTSEE
T ss_pred             CCcCCCEEEEecCCCCCCCChhhhCCCcccCccccc---cccCCCC-------------------cceeEEEeccccEEE
Confidence            99999999987654 599999999999999987654   4555566                   999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      +|+++++++|++++++++|||+++ +..++++|++|||+|+ |++|++++++++..|+ +|+++++++++.+.++++|++
T Consensus       139 iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~  216 (347)
T 2hcy_A          139 IPQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGE  216 (347)
T ss_dssp             ECTTCCHHHHGGGGTHHHHHHHHH-HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHhhhHHHHHHHH-HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCc
Confidence            999999999999999999999976 4458999999999999 8999999999999999 999999999999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  328 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  328 (373)
                      +++|..+  ..++.+.+.+.+++++|++||++|....++.++++++++ |+++.+|... +...+++...++. ++++.|
T Consensus       217 ~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g  292 (347)
T 2hcy_A          217 VFIDFTK--EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA-GAKCCSDVFNQVVKSISIVG  292 (347)
T ss_dssp             EEEETTT--CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCT-TCEEEEEHHHHHHTTCEEEE
T ss_pred             eEEecCc--cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCC-CCCCCCCHHHHhhCCcEEEE
Confidence            9998762  267888888877668999999999977799999999997 9999999854 2345677777666 999999


Q ss_pred             eecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          329 TYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      +..+.   .++++++++++++|++++  +.|+++++++|++.+
T Consensus       293 ~~~~~---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  332 (347)
T 2hcy_A          293 SYVGN---RADTREALDFFARGLVKSPIKVVGLSTLPEIYEKM  332 (347)
T ss_dssp             CCCCC---HHHHHHHHHHHHTTSCCCCEEEEEGGGHHHHHHHH
T ss_pred             ccCCC---HHHHHHHHHHHHhCCCccceEEEcHHHHHHHHHHH
Confidence            86543   688999999999999986  789999999887653

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-54  Score=419.49  Aligned_cols=325  Identities=24%  Similarity=0.340  Sum_probs=285.6

Q ss_pred             CcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      +|..+|||+++.++++.++++++|.|+|+++||||||.++|||++|++.+.|.++..  .+|.++|||++|+|+++| +|
T Consensus        13 ~~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~--~~P~v~GhE~~G~V~~vG-~V   89 (380)
T 1vj0_A           13 MMGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV--PLPIILGHEGAGRVVEVN-GE   89 (380)
T ss_dssp             -CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEES-SC
T ss_pred             HhhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCC--CCCcccCcCcEEEEEEeC-Cc
Confidence            466789999999998449999999999999999999999999999999999876533  689999999999999999 99


Q ss_pred             C------ccCCCCEEEeeCCCCCCCCcccc-CCCCCcCccCCCCCCCCC--------CCCCCccccccCCceeccccccc
Q 017335           91 E------EVKERDLVLPIFHRDCGECRDCK-SSKSNTCSKFGRGYRPNM--------PRDGTSRFRELKGDVIHHFLNIS  155 (373)
Q Consensus        91 ~------~~~~Gd~V~~~~~~~c~~c~~c~-~g~~~~c~~~~~~~~~g~--------~~~G~~~~~~~~~~~~~~~~~~g  155 (373)
                      +      +|++||||++.+...|+.|++|+ .|++++|++...   .|.        ..+|                   
T Consensus        90 ~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~~~~~~~~G-------------------  147 (380)
T 1vj0_A           90 KRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGCSEYPHLRG-------------------  147 (380)
T ss_dssp             CBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCSSSTTCCCS-------------------
T ss_pred             cccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---eccccccCCCCCCCc-------------------
Confidence            9      99999999999999999999999 999999987643   333        2234                   


Q ss_pred             ceeeeEEe-eccceEEcCCCCChh-hhhccchhhhhHHHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEE
Q 017335          156 SFTEYSVV-DITHVVKITPHIPLG-IACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIG  232 (373)
Q Consensus       156 ~~a~~~~v-~~~~~~~lP~~l~~~-~aa~l~~~~~ta~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~  232 (373)
                      +|+||+.+ |++.++++|++++++ +|++++ +++|||+++ +..+ +++|++|||+|+|++|++++|+||.+|+.+|++
T Consensus       148 ~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~  225 (380)
T 1vj0_A          148 CYSSHIVLDPETDVLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIV  225 (380)
T ss_dssp             SSBSEEEECTTCCEEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEE
T ss_pred             cccceEEEcccceEEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEE
Confidence            99999999 999999999999999 777776 999999977 6678 999999999999999999999999999449999


Q ss_pred             EcCChhHHHHHHHcCCceEEcCC---CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          233 VDINPEKFEIGKKFGITDFINPA---TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       233 ~~~~~~~~~~~~~lga~~vi~~~---~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      ++++++++++++++|++++++++   +   .++.+.+++.+++ ++|+|||++|.+..++.++++++++ |+++.+|...
T Consensus       226 ~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~  301 (380)
T 1vj0_A          226 IAGSPNRLKLAEEIGADLTLNRRETSV---EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAV  301 (380)
T ss_dssp             EESCHHHHHHHHHTTCSEEEETTTSCH---HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCS
T ss_pred             EcCCHHHHHHHHHcCCcEEEeccccCc---chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence            99999999999999999999987   5   7888899999887 8999999999876699999999997 9999999854


Q ss_pred             CCCccccCHHH-Hhh-CcEEEEeecCCCCchhHHHHHHHHHHc--CCCCC---CcccccCCCcccccc
Q 017335          309 HGSPISLNSIE-ILK-GRSVCGTYFGGLKPRSDIATLAQKYLD--KVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       309 ~~~~~~~~~~~-~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~--g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      .....+++... ++. ++++.|+..+.   .++++++++++++  |++.+   +.|+++++++|++.+
T Consensus       302 ~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~  366 (380)
T 1vj0_A          302 PQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELM  366 (380)
T ss_dssp             CCCCEEECHHHHTTTTTCEEEECCCCC---HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHH
T ss_pred             CCCCeeEchHHHHHhCCeEEEEeecCC---HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHH
Confidence            12245777776 666 99999986553   6889999999999  88854   689999999988654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.1e-53  Score=408.63  Aligned_cols=319  Identities=23%  Similarity=0.383  Sum_probs=265.4

Q ss_pred             cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      .+|||+++.+++++++++++|.|+|+++||||||.++|||++|++.+.|.++.....+|.++|||++|+|+++|++ ++|
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            4799999999976699999999999999999999999999999999998765211168999999999999999999 999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee-ccceEEcC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKIT  172 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~lP  172 (373)
                      ++||||+..+...|+.|.+|+.|++++|++...   .|...+|                   +|+||+.+| ++.++++ 
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~i-  137 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQTTNG-------------------GFSEYMLVKSSRWLVKL-  137 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEESCGGGEEEE-
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccccCC-------------------cceeeEEecCcccEEEe-
Confidence            999999888888999999999999999987643   4555566                   999999999 9999999 


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHH----hCCCCCCEEEEECCChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHHc
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKV----AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKF  246 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~----~~~~~~~~VlI~G~G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~l  246 (373)
                      +++++++|+.+++++.|||+++.+.    .++ +|++|||+|+|++|++++|+||.+  |+ +|++++++++++++++++
T Consensus       138 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l  215 (344)
T 2h6e_A          138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL  215 (344)
T ss_dssp             SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH
T ss_pred             CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh
Confidence            9999999999999999999987554    288 999999999999999999999999  99 899999999999999999


Q ss_pred             CCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       247 ga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      |+++++++++   .  .+.+.+++++ ++|+|||++|....++.++++++++ |+++.+|....  ..+++...++. ++
T Consensus       216 Ga~~vi~~~~---~--~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~  287 (344)
T 2h6e_A          216 GADYVSEMKD---A--ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGK--RVSLEAFDTAVWNK  287 (344)
T ss_dssp             TCSEEECHHH---H--HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHHHTTC
T ss_pred             CCCEEecccc---c--hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCC--CcccCHHHHhhCCc
Confidence            9999997642   0  1234455556 8999999999986799999999997 99999997543  34677777666 99


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      ++.|+..+.   .++++++++++++|++++  +.|+++++++|++.+
T Consensus       288 ~i~g~~~~~---~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~  331 (344)
T 2h6e_A          288 KLLGSNYGS---LNDLEDVVRLSESGKIKPYIIKVPLDDINKAFTNL  331 (344)
T ss_dssp             EEEECCSCC---HHHHHHHHHHHHTTSSCCCEEEECC----------
T ss_pred             EEEEEecCC---HHHHHHHHHHHHcCCCCcceEEEeHHHHHHHHHHH
Confidence            999986543   688999999999999986  789999999998765

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.9e-53  Score=411.93  Aligned_cols=324  Identities=19%  Similarity=0.195  Sum_probs=282.7

Q ss_pred             CCCcccceeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335            9 KAGKVIRCKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      +.+||.+|||+++.+++ +.++++++|.|+|++|||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|
T Consensus        21 ~~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~P~v~GhE~~G~V~~vG   99 (363)
T 3uog_A           21 QSMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDL-AFPFVPASDMSGVVEAVG   99 (363)
T ss_dssp             --CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCC-CSSBCCCCEEEEEEEEEC
T ss_pred             eccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCcCcccceEEEEEEEC
Confidence            34678899999999764 2499999999999999999999999999999999998765322 789999999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCC-CCCCCCCCccccccCCceecccccccceeeeEEeecc
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT  166 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  166 (373)
                      ++|++|++||||++.+..      +|+.|. +.|.+...... .|...+|                   +|+||+.+|++
T Consensus       100 ~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~  153 (363)
T 3uog_A          100 KSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPG-------------------VLSEYVVLPEG  153 (363)
T ss_dssp             TTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCC-------------------CCBSEEEEEGG
T ss_pred             CCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCC-------------------cceeEEEechH
Confidence            999999999999987653      678888 88975322211 4555566                   99999999999


Q ss_pred             ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017335          167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF  246 (373)
Q Consensus       167 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l  246 (373)
                      .++++|+++++++||+++++++|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++
T Consensus       154 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l  232 (363)
T 3uog_A          154 WFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL  232 (363)
T ss_dssp             GEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH
T ss_pred             HeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc
Confidence            9999999999999999999999999988788999999999999999999999999999999 999999999999999999


Q ss_pred             CCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       247 ga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      |+++++|.+.   .++.+.+++.+++ ++|+||||+|... ++.++++++++ |+++.+|.... ...+++...++. ++
T Consensus       233 Ga~~vi~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~  306 (363)
T 3uog_A          233 GADHGINRLE---EDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVAPD-GRISVIGVLEG-FEVSGPVGPLLLKSP  306 (363)
T ss_dssp             TCSEEEETTT---SCHHHHHHHHHTTCCEEEEEEETTSSC-HHHHHHHEEEE-EEEEEECCCSS-CEECCBTTHHHHTCC
T ss_pred             CCCEEEcCCc---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhhcC-CEEEEEecCCC-cccCcCHHHHHhCCc
Confidence            9999999654   7899999999988 9999999999655 99999999997 99999998543 335666666666 99


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++.|+..+.   .++++++++++++|++.+   +.|+++++.+|++.+
T Consensus       307 ~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  351 (363)
T 3uog_A          307 VVQGISVGH---RRALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHL  351 (363)
T ss_dssp             EEEECCCCC---HHHHHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTG
T ss_pred             EEEEEecCC---HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHH
Confidence            999987554   789999999999999976   789999999998765

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.5e-53  Score=410.13  Aligned_cols=319  Identities=26%  Similarity=0.344  Sum_probs=287.2

Q ss_pred             eeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |||+++...+ ..++++|+|+|+|++|||||||.++|||++|+++++|.++.   .+|.++|||++|+|+++|++|++|+
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~---~~p~i~GhE~aG~V~~vG~~V~~~~   77 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN---KAGTVLGHEGIGIVKEIGADVSSLQ   77 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC---CTTCBCCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC---CCCcccceeEEEEEEEECceeeecc
Confidence            8999997543 33999999999999999999999999999999999988754   6899999999999999999999999


Q ss_pred             CCCEEEeeCCC-CCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           95 ERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        95 ~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      +||||++.+.. .|+.|.+|..+.++.|.....   .+...+|                   +|+||+.+|++.++++|+
T Consensus        78 ~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~G-------------------~~ae~~~~~~~~~~~iP~  135 (348)
T 4eez_A           78 VGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN---AGYSVDG-------------------GMAEEAIVVADYAVKVPD  135 (348)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGSCBCCT
T ss_pred             cCCeEeecccccccCccccccCCcccccccccc---cccccCC-------------------cceeeccccccceeecCC
Confidence            99999988764 578999999999999988776   5666677                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ++++++|++++++++|||+++ +..++++|++|||+|+|++|.+++|+++.++..+|++++++++|+++++++|+++++|
T Consensus       136 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~  214 (348)
T 4eez_A          136 GLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTIN  214 (348)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCCHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEe
Confidence            999999999999999999964 7789999999999999999999999999875449999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +++   .++.+++++.+++ ++|.++|++++..++..++++++++ |+++.+|....  ..+++...++. ++++.|+..
T Consensus       215 ~~~---~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~gs~~  288 (348)
T 4eez_A          215 SGD---VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPNT--EMTLSVPTVVFDGVEVAGSLV  288 (348)
T ss_dssp             C-C---CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCSC--EEEECHHHHHHSCCEEEECCS
T ss_pred             CCC---CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccCC--CCccCHHHHHhCCeEEEEEec
Confidence            998   8999999999998 9999999999999999999999997 99999997433  45677777777 999999976


Q ss_pred             CCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          332 GGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      +.   +++++++++++++|++++  +.|+++++++|++.+
T Consensus       289 ~~---~~~~~~~~~l~~~g~i~p~~~~~~l~~~~~A~~~l  325 (348)
T 4eez_A          289 GT---RLDLAEAFQFGAEGKVKPIVATRKLEEINDIIDEM  325 (348)
T ss_dssp             CC---HHHHHHHHHHHHTTSCCCCEEEECGGGHHHHHHHH
T ss_pred             CC---HHHHHHHHHHHHcCCCEEEEEEEeHHHHHHHHHHH
Confidence            65   788999999999999987  789999999998754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=4.1e-54  Score=413.49  Aligned_cols=319  Identities=24%  Similarity=0.359  Sum_probs=282.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCC---CCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---LPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      |||+++++++++++++++|.|+|+++||||||.++|||++|++.+.|.++   ..  .+|.++|||++|+|+++|++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~--~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRI--RPPLVTGHEFSGVVEAVGPGVRR   78 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHC--CSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccC--CCCCcCCccceEEEEEECCCCCc
Confidence            79999999887799999999999999999999999999999999988654   23  68899999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      |++||||++.+...|+.|++|+.|++++|++...   .|...+|                   +|+||+.+|++.++++|
T Consensus        79 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP  136 (343)
T 2dq4_A           79 PQVGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVDRDG-------------------GFAEYVVVPAENAWVNP  136 (343)
T ss_dssp             SCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEEEC
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCCCCC-------------------cceeEEEEchHHeEECC
Confidence            9999999999999999999999999999988764   4555556                   99999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++|+++. ++.|||+++.+..++ +|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++ +++++
T Consensus       137 ~~~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~  213 (343)
T 2dq4_A          137 KDLPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLV  213 (343)
T ss_dssp             TTSCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEE
T ss_pred             CCCCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhcc
Confidence            999999999885 788999987547889 999999999999999999999999987899999999999999999 99999


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH-HHHhh-CcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILK-GRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~-~~~i~g~~  330 (373)
                      ++++   .++.+.+++.+++++|+|||++|....++.++++++++ |+++.+|...  ...+++. ..++. ++++.|+.
T Consensus       214 ~~~~---~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~~~~~~~~~i~g~~  287 (343)
T 2dq4_A          214 NPLE---EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPS--DPIRFDLAGELVMRGITAFGIA  287 (343)
T ss_dssp             CTTT---SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCS--SCEEECHHHHTGGGTCEEEECC
T ss_pred             CcCc---cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCceeCcHHHHHhCceEEEEee
Confidence            9887   78888898888338999999999977799999999997 9999999743  3456777 66665 99999986


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ...  ..++++++++++++|++++     +.|+++++++|++.+
T Consensus       288 ~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~  329 (343)
T 2dq4_A          288 GRR--LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLL  329 (343)
T ss_dssp             SCC--TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHH
T ss_pred             cCC--CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHH
Confidence            542  2578999999999999753     678999999887653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.4e-53  Score=409.78  Aligned_cols=321  Identities=22%  Similarity=0.340  Sum_probs=284.4

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|++|++|
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~   79 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKL-PLPHVLGADGSGVVDAVGPGVEGF   79 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTC-CSSEECCSEEEEEEEEECSSCCSC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCC-CCCcccccceEEEEEEECCCCCCC
Confidence            799999998864  89999999999999999999999999999999988764321 689999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||||++.+...|+.|.+|+.|++++|++...   .|+..+|                   +|+||+.+|++.++++|+
T Consensus        80 ~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~P~  137 (343)
T 2eih_A           80 APGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEHRHG-------------------TYAEYVVLPEANLAPKPK  137 (343)
T ss_dssp             CTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTSSCC-------------------SSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEECCCCCcccchhhccCcccccccccc---cCcCCCc-------------------cceeEEEeChHHeEECCC
Confidence            999999999999999999999999999988764   5655566                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++|++++++++|||+++.+..+++++++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|+++++
T Consensus       138 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~  216 (343)
T 2eih_A          138 NLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETV  216 (343)
T ss_dssp             TSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEE
Confidence            99999999999999999998766678999999999999 9999999999999999 999999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      |.++   .++.+.+.+.+++ ++|++||++|. ..++.++++++++ |+++.+|..... ..+++...++. ++++.|+.
T Consensus       217 d~~~---~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~  290 (343)
T 2eih_A          217 NYTH---PDWPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGST  290 (343)
T ss_dssp             ETTS---TTHHHHHHHHTTTTCEEEEEESSCS-SSHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECC
T ss_pred             cCCc---ccHHHHHHHHhCCCCceEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEec
Confidence            9877   6788888888876 89999999994 4599999999997 999999975432 23456556555 99999985


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ...   .++++++++++++|++++   +.|+++++.+|++.+
T Consensus       291 ~~~---~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  329 (343)
T 2eih_A          291 MAS---KSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLL  329 (343)
T ss_dssp             SCC---GGGHHHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHH
T ss_pred             Ccc---HHHHHHHHHHHHcCCCCCceeEEeeHHHHHHHHHHH
Confidence            332   678999999999999986   789999999888643

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.6e-54  Score=417.48  Aligned_cols=322  Identities=20%  Similarity=0.237  Sum_probs=275.8

Q ss_pred             cccceeeEEeecCCCCeEEEE--EecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEE--IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~--~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      +|.+|||+++.+++.++++++  +|.|+|+++||||||.++|||++|++.+.|.++..  .+|.++|||++|+|+++|++
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~GhE~~G~V~~vG~~   80 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--KMPLVVGHEIVGKVVKLGPK   80 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC--CSSEECCCCEEEEEEEECTT
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCC--CCCcccCcCceEEEEEeCCC
Confidence            466899999999876689999  99999999999999999999999999999876544  68999999999999999999


Q ss_pred             CC-ccCCCCEEEeeC-CCCCCCCccccCCCCCcCccC-CC-C--CCCCCCCCCCccccccCCceecccccccceeeeEEe
Q 017335           90 VE-EVKERDLVLPIF-HRDCGECRDCKSSKSNTCSKF-GR-G--YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV  163 (373)
Q Consensus        90 v~-~~~~Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~-~~-~--~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v  163 (373)
                      |+ +|++||||++.+ ...|+.|.+|+.|++++|++. .. .  ...|...+|                   +|+||+.+
T Consensus        81 v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v  141 (360)
T 1piw_A           81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQG-------------------GYANYVRV  141 (360)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCC-------------------SSBSEEEE
T ss_pred             CCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCC-------------------cceeEEEE
Confidence            99 999999996654 468999999999999999875 11 0  001333445                   99999999


Q ss_pred             eccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          164 DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       164 ~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      |++.++++|+++++++|+++++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++++
T Consensus       142 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~  219 (360)
T 1piw_A          142 HEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDA  219 (360)
T ss_dssp             EGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHH
T ss_pred             chhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence            999999999999999999999999999997654 899999999999999999999999999999 899999999999999


Q ss_pred             HHcCCceEEcCCCCCCc-cHHHHHHHhcCCCccEEEECCCC--HHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH
Q 017335          244 KKFGITDFINPATCGDK-TVSQVIKEMTDGGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI  320 (373)
Q Consensus       244 ~~lga~~vi~~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~  320 (373)
                      +++|+++++++++   . ++.+.+.    +++|+|||++|.  ...++.++++++++ |+++.+|.... . .+++...+
T Consensus       220 ~~lGa~~v~~~~~---~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~-~~~~~~~~  289 (360)
T 1piw_A          220 MKMGADHYIATLE---EGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-H-EMLSLKPY  289 (360)
T ss_dssp             HHHTCSEEEEGGG---TSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-S-CCEEECGG
T ss_pred             HHcCCCEEEcCcC---chHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-c-cccCHHHH
Confidence            9999999998876   4 6655443    589999999998  55588999999997 99999998543 1 13444455


Q ss_pred             hh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccC--CCcccccc
Q 017335          321 LK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCD--PNSDSAGL  369 (373)
Q Consensus       321 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~--~~~a~~~~  369 (373)
                      +. ++++.|+..+.   .++++++++++++|++++  +.|++++  +++|++.+
T Consensus       290 ~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~~l~~~~~~~A~~~~  340 (360)
T 1piw_A          290 GLKAVSISYSALGS---IKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERM  340 (360)
T ss_dssp             GCBSCEEEECCCCC---HHHHHHHHHHHHHTTCCCCEEEEESSHHHHHHHHHHH
T ss_pred             HhCCeEEEEEecCC---HHHHHHHHHHHHhCCCcceEEEEeccHhHHHHHHHHH
Confidence            55 99999986543   688999999999999986  7889999  88887653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.2e-53  Score=409.41  Aligned_cols=314  Identities=16%  Similarity=0.183  Sum_probs=275.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCC---CccccCcccEEEEEeCCCCCc
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL---PVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      |||+++++++++++++++|.|+|+++||||||.++|||++|++++.|.++..  .+   |.++|||++| |+++|++ ++
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~~~p~v~G~E~~G-V~~vG~~-~~   76 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGF--PEGEDHLVLGHEAVG-VVVDPND-TE   76 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTS--CTTCSEEECCSEEEE-EEEECTT-SS
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCC--CCCCCCcccCceeEE-EEEECCC-CC
Confidence            8999999988779999999999999999999999999999999999875543  56   8999999999 9999999 99


Q ss_pred             cCCCCEEEeeCCCC--CCCCccccCCCCCcCccCCCCCCC--CC-CCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           93 VKERDLVLPIFHRD--CGECRDCKSSKSNTCSKFGRGYRP--NM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~--c~~c~~c~~g~~~~c~~~~~~~~~--g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      |++||||++.+...  |+.|++|+.|++++|++...   .  |+ ..+|                   +|+||+.+|++.
T Consensus        77 ~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~~~g~~~~~G-------------------~~aey~~v~~~~  134 (357)
T 2b5w_A           77 LEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMY---FERGIVGAHG-------------------YMSEFFTSPEKY  134 (357)
T ss_dssp             CCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSC---EEETTBEECC-------------------SCBSEEEEEGGG
T ss_pred             CCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcc---cccCccCCCc-------------------ceeeEEEEchHH
Confidence            99999999998878  99999999999999987654   2  43 3345                   999999999999


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCC------CEEEEECCChHHHHH-HHHH-HHCCCCeEEEEcCChh-
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG------STVAIFGLGAVGLAV-AEGA-RLNRASKIIGVDINPE-  238 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~------~~VlI~G~G~vG~~a-~~la-~~~G~~~Vi~~~~~~~-  238 (373)
                      ++++|++++ ++| +++.+++|||+++ +..++++|      ++|||+|+|++|+++ +|+| |.+|+++|++++++++ 
T Consensus       135 ~~~iP~~~~-~~a-al~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~  211 (357)
T 2b5w_A          135 LVRIPRSQA-ELG-FLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRP  211 (357)
T ss_dssp             EEECCGGGS-TTG-GGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSS
T ss_pred             eEECCCCcc-hhh-hhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCccc
Confidence            999999999 654 5667999999987 77889999      999999999999999 9999 9999955999999999 


Q ss_pred             --HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccC
Q 017335          239 --KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN  316 (373)
Q Consensus       239 --~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~  316 (373)
                        ++++++++|++++ ++++   .++.+ +++. ++++|+|||++|....++.++++++++ |+++.+|.... ...+++
T Consensus       212 ~~~~~~~~~lGa~~v-~~~~---~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~  283 (357)
T 2b5w_A          212 DPTIDIIEELDATYV-DSRQ---TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVD  283 (357)
T ss_dssp             CHHHHHHHHTTCEEE-ETTT---SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCC
T ss_pred             HHHHHHHHHcCCccc-CCCc---cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceec
Confidence              9999999999999 8876   66777 7777 558999999999987799999999997 99999998542 345677


Q ss_pred             HHHH----hh-CcEEEEeecCCCCchhHHHHHHHHHHcC--C-CCC---CcccccCCCcccccc
Q 017335          317 SIEI----LK-GRSVCGTYFGGLKPRSDIATLAQKYLDK--V-HLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       317 ~~~~----~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g--~-i~~---~~~~~~~~~~a~~~~  369 (373)
                      ...+    +. ++++.|+..+.   .++++++++++++|  + +.+   +.|+++++++|++.+
T Consensus       284 ~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~  344 (357)
T 2b5w_A          284 AGAFHREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD  344 (357)
T ss_dssp             HHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS
T ss_pred             HHHHhHHHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh
Confidence            7776    55 99999986544   68899999999999  8 443   789999999998754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3e-53  Score=411.30  Aligned_cols=324  Identities=20%  Similarity=0.282  Sum_probs=272.3

Q ss_pred             CcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      ...++|||+++.++++.++++++|.|+|+++||||||.++|||++|++.+.|..+..  .+|.++|||++|+|+++|++|
T Consensus        18 ~~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~V   95 (369)
T 1uuf_A           18 KAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT--VYPCVPGHEIVGRVVAVGDQV   95 (369)
T ss_dssp             -----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC--CSSBCCCCCEEEEEEEECTTC
T ss_pred             hcCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCC--CCCeecccCceEEEEEECCCC
Confidence            467889999998887779999999999999999999999999999999998875544  689999999999999999999


Q ss_pred             CccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCC-----CCCCCCCCccccccCCceecccccccceeeeEEee
Q 017335           91 EEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYR-----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD  164 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~-----~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  164 (373)
                      ++|++||||++.+. ..|+.|.+|++|++++|++....+.     .|...+|                   +|+||+.+|
T Consensus        96 ~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G-------------------~~aeyv~v~  156 (369)
T 1uuf_A           96 EKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLG-------------------GYSQQIVVH  156 (369)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCC-------------------SSBSEEEEE
T ss_pred             CCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCC-------------------cccceEEEc
Confidence            99999999998876 4699999999999999987531110     1223344                   999999999


Q ss_pred             ccceEEcCCC-CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          165 ITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       165 ~~~~~~lP~~-l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      ++.++++|++ +++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++++
T Consensus       157 ~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a  234 (369)
T 1uuf_A          157 ERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAA  234 (369)
T ss_dssp             GGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHH
T ss_pred             chhEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence            9999999999 9999999999999999997654 689999999999999999999999999999 799999999999999


Q ss_pred             HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-
Q 017335          244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-  322 (373)
Q Consensus       244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-  322 (373)
                      +++|+++++++++   .++.+   +.. +++|+|||++|.+..++.++++++++ |+++.+|..... ..+++...++. 
T Consensus       235 ~~lGa~~vi~~~~---~~~~~---~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~  305 (369)
T 1uuf_A          235 KALGADEVVNSRN---ADEMA---AHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMK  305 (369)
T ss_dssp             HHHTCSEEEETTC---HHHHH---TTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTT
T ss_pred             HHcCCcEEecccc---HHHHH---Hhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCC-ccccCHHHHHhC
Confidence            9999999999876   55433   333 48999999999875689999999997 999999975322 12566666666 


Q ss_pred             CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          323 GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      ++++.|+..+.   .++++++++++++|++++  +.|+++++++|++.+
T Consensus       306 ~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~  351 (369)
T 1uuf_A          306 RRAIAGSMIGG---IPETQEMLDFCAEHGIVADIEMIRADQINEAYERM  351 (369)
T ss_dssp             TCEEEECCSCC---HHHHHHHHHHHHHHTCCCCEEEECGGGHHHHHHHH
T ss_pred             CcEEEEeecCC---HHHHHHHHHHHHhCCCCcceEEEcHHHHHHHHHHH
Confidence            99999986544   678999999999999986  679999999887654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.3e-52  Score=403.70  Aligned_cols=320  Identities=25%  Similarity=0.335  Sum_probs=283.4

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC------CCCCCCccccCcccEEEEEeCCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------PKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      |||+++++++.+++++++|.|+|+++||||||.++|||++|++.+.|.++.      ....+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            899999999866999999999999999999999999999999998876541      01168999999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-cce
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THV  168 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~  168 (373)
                      |++|++||||+..+...|+.|.+|+.|++++|++...   .|+..+|                   +|+||+.+|+ +.+
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~  138 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYM  138 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---ccccCCC-------------------cceeEEEecCccce
Confidence            9999999999888888999999999999999987654   4555566                   9999999999 999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCC-hHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHc
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKF  246 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G-~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~l  246 (373)
                      +++ +++++++|+.+++++.|||+++ +..+++++++|||+|+| ++|++++|+++.. |+ +|+++++++++++.++++
T Consensus       139 ~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~  215 (347)
T 1jvb_A          139 YKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA  215 (347)
T ss_dssp             EEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred             EEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence            999 9999999999999999999976 55889999999999995 9999999999999 99 899999999999999999


Q ss_pred             CCceEEcCCCCCCccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          247 GITDFINPATCGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       247 ga~~vi~~~~~~~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      |++++++..+   .++.+.+.+.+. +++|++||++|....++.++++++++ |+++.+|..... . +++...++. ++
T Consensus       216 g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~-~~~~~~~~~~~~  289 (347)
T 1jvb_A          216 GADYVINASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD-L-HYHAPLITLSEI  289 (347)
T ss_dssp             TCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCC-C-CCCHHHHHHHTC
T ss_pred             CCCEEecCCC---ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-C-CCCHHHHHhCce
Confidence            9999999887   778888888886 58999999999986799999999997 999999985422 2 667766666 99


Q ss_pred             EEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++.|+..+.   .++++++++++++|++++   +.|+++++++|++.+
T Consensus       290 ~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  334 (347)
T 1jvb_A          290 QFVGSLVGN---QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNL  334 (347)
T ss_dssp             EEEECCSCC---HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHH
T ss_pred             EEEEEeccC---HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHH
Confidence            999986544   688999999999999976   779999999887654

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.1e-52  Score=412.31  Aligned_cols=327  Identities=21%  Similarity=0.254  Sum_probs=284.7

Q ss_pred             CcccceeeEEeecCCCCeEEEEEecCC-CCCCeEEEEEeeeeccccchhcccCCCCC-----CCCCCCccccCcccEEEE
Q 017335           11 GKVIRCKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDL-----PKLPLPVIFGHEAVGVVE   84 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~l~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~-----~~~~~p~~~G~e~~G~V~   84 (373)
                      +.+.+|+++++..++. ++++++|.|+ |+++||||||.++|||++|++.+.|....     ....+|.++|||++|+|+
T Consensus        26 ~~~~~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~  104 (404)
T 3ip1_A           26 EGKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV  104 (404)
T ss_dssp             TTTBBSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred             hhhhhcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence            4556677777777665 9999999999 99999999999999999999998864211     012689999999999999


Q ss_pred             EeCCCC------CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 017335           85 SVGEYV------EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT  158 (373)
Q Consensus        85 ~vG~~v------~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  158 (373)
                      ++|++|      ++|++||||++.+...|+.|.+|++|++++|++...   .|+..+|                   +|+
T Consensus       105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~a  162 (404)
T 3ip1_A          105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFNVDG-------------------AFA  162 (404)
T ss_dssp             EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSB
T ss_pred             EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCCCCC-------------------CCc
Confidence            999999      889999999999999999999999999999998775   6777777                   999


Q ss_pred             eeEEeeccceEEcCCCCC------hhhhhccchhhhhHHHHHHHH-hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEE
Q 017335          159 EYSVVDITHVVKITPHIP------LGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKII  231 (373)
Q Consensus       159 ~~~~v~~~~~~~lP~~l~------~~~aa~l~~~~~ta~~~~~~~-~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi  231 (373)
                      ||+.+|++.++++|++++      +.++++++.+++|||+++... .++++|++|||+|+|++|++++|+|+.+|+++|+
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi  242 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVI  242 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEE
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence            999999999999999885      455888888999999987655 4799999999999999999999999999998999


Q ss_pred             EEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCH-HHHHHHHHHh----ccCCceEEEEc
Q 017335          232 GVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSS----REGWGKTVILG  305 (373)
Q Consensus       232 ~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~~l----~~~~G~~v~~G  305 (373)
                      +++++++++++++++|+++++|+++   .++.+.+++++++ ++|+||||+|++ ..++.+++++    +++ |+++.+|
T Consensus       243 ~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G  318 (404)
T 3ip1_A          243 LSEPSEVRRNLAKELGADHVIDPTK---ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVA  318 (404)
T ss_dssp             EECSCHHHHHHHHHHTCSEEECTTT---SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECS
T ss_pred             EECCCHHHHHHHHHcCCCEEEcCCC---CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeC
Confidence            9999999999999999999999988   8899999999988 999999999998 3577787888    997 9999999


Q ss_pred             ccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          306 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       306 ~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ....  ..+++...++. ++++.|+....  ..++++++++++++| +++     +.|+++++.+|++.+
T Consensus       319 ~~~~--~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~  383 (404)
T 3ip1_A          319 RADA--KIPLTGEVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRL  383 (404)
T ss_dssp             CCCS--CEEECHHHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHT
T ss_pred             CCCC--CCcccHHHHhccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHH
Confidence            8543  35778888777 99999986432  247899999999999 753     688999999988754

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=4.7e-52  Score=401.28  Aligned_cols=321  Identities=21%  Similarity=0.340  Sum_probs=273.3

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      ++|+|+++++.++.+.++++++|.|+|+++||||||.++|||++|++.+.|.++..  .+|.++|||++|+|+++|++|+
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMS--NYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCC--CSSBCCCCEEEEEEEEECSSCC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCC--CCCeecCcceeEEEEEECCCCC
Confidence            46789999998876669999999999999999999999999999999998876543  6899999999999999999999


Q ss_pred             ccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCC----CCCCCCCCccccccCCceecccccccceeeeEEeecc
Q 017335           92 EVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT  166 (373)
Q Consensus        92 ~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~----~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  166 (373)
                      +|++||||++.+. ..|+.|.+|+.|.+++|.+....+.    .|...+                   |+|+||+.+|++
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~  144 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQ-------------------GGFAKATVVHQK  144 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCC-------------------CSSBSCEEEEGG
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCC-------------------CccccEEEechh
Confidence            9999999987654 5799999999999999975432210    111223                   499999999999


Q ss_pred             ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCC-CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-
Q 017335          167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-  244 (373)
Q Consensus       167 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~-~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-  244 (373)
                      .++++|+++++++|+.+++++.|||+++ +..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ 
T Consensus       145 ~~~~~P~~ls~~~aa~l~~~~~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~  222 (357)
T 2cf5_A          145 FVVKIPEGMAVEQAAPLLCAGVTVYSPL-SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQ  222 (357)
T ss_dssp             GEEECCSSCCHHHHTGGGTHHHHHHHHH-HHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHT
T ss_pred             hEEECcCCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH
Confidence            9999999999999999999999999975 557888 99999999999999999999999999 9999999999999988 


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh-
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-  322 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-  322 (373)
                      ++|+++++++++   .   +.+.+.+ +++|+|||++|....++.++++++++ |+++.+|....  ..+ ++.. ++. 
T Consensus       223 ~lGa~~vi~~~~---~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~-~~~~  291 (357)
T 2cf5_A          223 DLGADDYVIGSD---Q---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINN--PLQFLTPL-LMLG  291 (357)
T ss_dssp             TSCCSCEEETTC---H---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSS--CCCCCHHH-HHHH
T ss_pred             HcCCceeecccc---H---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCC--CccccCHH-HHhC
Confidence            899999998875   3   3455554 38999999999875589999999997 99999997532  223 4444 555 


Q ss_pred             CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          323 GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      ++++.|+..+.   .++++++++++++|++++  +.|+++++++|++.+
T Consensus       292 ~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  337 (357)
T 2cf5_A          292 RKVITGSFIGS---MKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERL  337 (357)
T ss_dssp             TCEEEECCSCC---HHHHHHHHHHHHHTTCCCCEEEEEGGGHHHHHHHH
T ss_pred             ccEEEEEccCC---HHHHHHHHHHHHcCCCCCceEEEeHHHHHHHHHHH
Confidence            99999986543   678999999999999986  789999999887653

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.8e-52  Score=409.90  Aligned_cols=323  Identities=24%  Similarity=0.311  Sum_probs=277.7

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCC-CC-----CeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPP-KA-----WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~-~~-----~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      +|||+++++++. ++++++|.|+| ++     +||||||.++|||++|++.+.|..+.   .+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~~---~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIV---PKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSCC---CTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCCC---CCCcccCCceEEEEEEECC
Confidence            599999999876 99999999997 68     99999999999999999999886432   6899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCC-----CCCCC---CCCCCccccccCCceecccccccceeee
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG-----YRPNM---PRDGTSRFRELKGDVIHHFLNISSFTEY  160 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-----~~~g~---~~~G~~~~~~~~~~~~~~~~~~g~~a~~  160 (373)
                      +|++|++||||++.+...|+.|.+|++|++++|++....     ...|+   ..+                   |+|+||
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~-------------------G~~aey  138 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWS-------------------GGQAEY  138 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCC-------------------CSSBSE
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCC-------------------ceeeee
Confidence            999999999999999999999999999999999872110     01222   123                   499999


Q ss_pred             EEeecc--ceEEcCCCCChhh----hhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc
Q 017335          161 SVVDIT--HVVKITPHIPLGI----ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD  234 (373)
Q Consensus       161 ~~v~~~--~~~~lP~~l~~~~----aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~  234 (373)
                      +.+|++  .++++|+++++++    +++++++++|||+++ +..++++|++|||+|+|++|++++|+||.+|+++|++++
T Consensus       139 ~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~  217 (398)
T 2dph_A          139 VLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGD  217 (398)
T ss_dssp             EEESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred             EEeccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence            999987  8999999999998    888999999999987 788999999999999999999999999999988899999


Q ss_pred             CChhHHHHHHHcCCceEEcCCCCCCccH-HHHHHHhcCC-CccEEEECCCCH--------------HHHHHHHHHhccCC
Q 017335          235 INPEKFEIGKKFGITDFINPATCGDKTV-SQVIKEMTDG-GADYCFECIGLT--------------SVMNDAFNSSREGW  298 (373)
Q Consensus       235 ~~~~~~~~~~~lga~~vi~~~~~~~~~~-~~~i~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~  298 (373)
                      ++++++++++++|++ ++++++   .++ .+.+++++++ ++|+|||++|..              .+++.++++++++ 
T Consensus       218 ~~~~~~~~a~~lGa~-~i~~~~---~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-  292 (398)
T 2dph_A          218 QNPERLKLLSDAGFE-TIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-  292 (398)
T ss_dssp             SCHHHHHHHHTTTCE-EEETTS---SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-
T ss_pred             CCHHHHHHHHHcCCc-EEcCCC---cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-
Confidence            999999999999995 888876   565 8888888888 899999999975              2589999999997 


Q ss_pred             ceEEEEcccCC-----------CCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCC--C-----Ccccc
Q 017335          299 GKTVILGVEMH-----------GSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL--R-----SSFHL  359 (373)
Q Consensus       299 G~~v~~G~~~~-----------~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~--~-----~~~~~  359 (373)
                      |+++.+|...+           ....+++...++. ++++.|+...   ..++++++++++++|+++  +     +.|++
T Consensus       293 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l  369 (398)
T 2dph_A          293 GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITL  369 (398)
T ss_dssp             EEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECS
T ss_pred             CEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcH
Confidence            99999997521           1234566666665 8999886432   257799999999999998  4     68999


Q ss_pred             cCCCcccccc
Q 017335          360 CDPNSDSAGL  369 (373)
Q Consensus       360 ~~~~~a~~~~  369 (373)
                      +++.+|++.+
T Consensus       370 ~~~~~A~~~~  379 (398)
T 2dph_A          370 DQAPDGYAKF  379 (398)
T ss_dssp             TTHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988653

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.4e-52  Score=405.51  Aligned_cols=324  Identities=24%  Similarity=0.313  Sum_probs=276.1

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCCC-CCe------EEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPPK-AWE------IRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~~-~~e------vlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      +|||+++.+++. ++++++|.|+|+ ++|      |||||.++|||++|++.+.|.++.   .+|.++|||++|+|+++|
T Consensus         2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA---QVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC---CTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCCC---CCCcccCcccEEEEEEEC
Confidence            599999999876 999999999997 898      999999999999999999886532   578999999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCC---CCCC----CCCCCccccccCCceecccccccceeee
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY---RPNM----PRDGTSRFRELKGDVIHHFLNISSFTEY  160 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~---~~g~----~~~G~~~~~~~~~~~~~~~~~~g~~a~~  160 (373)
                      ++|++|++||||++.+...|+.|++|++|++++|++.....   ..|+    .++                   |+|+||
T Consensus        78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~-------------------G~~aey  138 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWT-------------------GGQAEY  138 (398)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBC-------------------CCSBSE
T ss_pred             CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCC-------------------ceeeeE
Confidence            99999999999999888899999999999999998764210   0122    123                   499999


Q ss_pred             EEeecc--ceEEcCCCCChhh----hhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc
Q 017335          161 SVVDIT--HVVKITPHIPLGI----ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD  234 (373)
Q Consensus       161 ~~v~~~--~~~~lP~~l~~~~----aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~  234 (373)
                      +++|++  .++++|+++++++    +++++++++|||+++ +..++++|++|||+|+|++|++++|+||.+|+++|++++
T Consensus       139 ~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~  217 (398)
T 1kol_A          139 VLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGD  217 (398)
T ss_dssp             EEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             EEecchhCeEEECCCCcchhhhcccccccccHHHHHHHHH-HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEc
Confidence            999987  8999999999988    788888999999987 578999999999999999999999999999997899999


Q ss_pred             CChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCH---------------HHHHHHHHHhccCC
Q 017335          235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT---------------SVMNDAFNSSREGW  298 (373)
Q Consensus       235 ~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~~l~~~~  298 (373)
                      ++++|+++++++|++ ++++++  ..++.+.+++++++ ++|+|||++|..               ..++.++++++++ 
T Consensus       218 ~~~~~~~~a~~lGa~-~i~~~~--~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-  293 (398)
T 1kol_A          218 LNPARLAHAKAQGFE-IADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-  293 (398)
T ss_dssp             SCHHHHHHHHHTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-
T ss_pred             CCHHHHHHHHHcCCc-EEccCC--cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-
Confidence            999999999999997 788765  13388889998887 899999999975               2589999999997 


Q ss_pred             ceEEEEcccCCC-----------CccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCC---C---Cccccc
Q 017335          299 GKTVILGVEMHG-----------SPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL---R---SSFHLC  360 (373)
Q Consensus       299 G~~v~~G~~~~~-----------~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~---~---~~~~~~  360 (373)
                      |+++.+|.....           ..++++...++. ++++.++..   ...++++++++++.+|+++   +   +.|+++
T Consensus       294 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~  370 (398)
T 1kol_A          294 GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRALMQAIMWDRINIAEVVGVQVISLD  370 (398)
T ss_dssp             EEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC---CHHHHHHHHHHHHHTTSCCHHHHHTEEEECGG
T ss_pred             CEEEEeccccCCcccccccccccccccccHHHHhhcccEEEeccc---ChHHHHHHHHHHHHcCCCCCccceeEEEEcHH
Confidence            999999975221           124566666665 899987642   2357789999999999998   2   789999


Q ss_pred             CCCcccccc
Q 017335          361 DPNSDSAGL  369 (373)
Q Consensus       361 ~~~~a~~~~  369 (373)
                      ++++|++.+
T Consensus       371 ~~~~A~~~~  379 (398)
T 1kol_A          371 DAPRGYGEF  379 (398)
T ss_dssp             GHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=5.5e-51  Score=395.07  Aligned_cols=326  Identities=21%  Similarity=0.329  Sum_probs=272.8

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      .+|+|++++..++.+.++++++|.|+|+++||||||.++|||++|++.+.|.++..  .+|.++|||++|+|+++|++|+
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~V~   90 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFS--MYPLVPGHEIVGEVTEVGSKVK   90 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCC--CSSBCCCCCEEEEEEEECTTCC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCC--CCCEecccceEEEEEEECCCCC
Confidence            35667777766655559999999999999999999999999999999998866544  6899999999999999999999


Q ss_pred             ccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           92 EVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        92 ~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +|++||||++.+. ..|+.|.+|+.|++++|.+....+ .+....|              ....|+|+||+.+|++.+++
T Consensus        91 ~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~-~~~~~~g--------------~~~~G~~aey~~v~~~~~~~  155 (366)
T 1yqd_A           91 KVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTY-ASIYHDG--------------TITYGGYSNHMVANERYIIR  155 (366)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESS-SSBCTTS--------------CBCCCSSBSEEEEEGGGCEE
T ss_pred             cCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccc-cccccCC--------------CcCCCccccEEEEchhhEEE
Confidence            9999999987654 579999999999999996654221 1111011              01124999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCC-CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI  248 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~-~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga  248 (373)
                      +|+++++++|+.+++++.|||+++ +..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|+
T Consensus       156 ~P~~ls~~~aa~l~~~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa  233 (366)
T 1yqd_A          156 FPDNMPLDGGAPLLCAGITVYSPL-KYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGA  233 (366)
T ss_dssp             CCTTSCTTTTGGGGTHHHHHHHHH-HHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCC
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHH-HhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCC
Confidence            999999999999999999999976 456788 99999999999999999999999999 9999999999998887 8999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEE
Q 017335          249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC  327 (373)
Q Consensus       249 ~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  327 (373)
                      ++++++++   .   +.+.+.+ +++|+|||++|....++.++++++++ |+++.+|....  ..+++...++. ++++.
T Consensus       234 ~~v~~~~~---~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i~  303 (366)
T 1yqd_A          234 DSFLVSRD---Q---EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEK--PLELPAFSLIAGRKIVA  303 (366)
T ss_dssp             SEEEETTC---H---HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHHTTTCEEE
T ss_pred             ceEEeccC---H---HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCC--CCCcCHHHHHhCCcEEE
Confidence            99998875   3   3455555 38999999999875588999999997 99999997432  34677777666 99999


Q ss_pred             EeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          328 GTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       328 g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      |+..+.   .+++.++++++++|++++  +.|+++++++|++.+
T Consensus       304 g~~~~~---~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  344 (366)
T 1yqd_A          304 GSGIGG---MKETQEMIDFAAKHNITADIEVISTDYLNTAMERL  344 (366)
T ss_dssp             ECCSCC---HHHHHHHHHHHHHTTCCCCEEEECGGGHHHHHHHH
T ss_pred             EecCCC---HHHHHHHHHHHHcCCCCCceEEEcHHHHHHHHHHH
Confidence            986544   678999999999999986  789999999887654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=8e-51  Score=404.91  Aligned_cols=329  Identities=18%  Similarity=0.176  Sum_probs=280.7

Q ss_pred             CcccceeeEEeecC---------------CCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC---------
Q 017335           11 GKVIRCKAAICRIP---------------GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL---------   66 (373)
Q Consensus        11 ~~~~~~ka~~~~~~---------------~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---------   66 (373)
                      ++|.||||+++.++               ++.++++++|.|+|+++||||||.++|||++|++...+....         
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            57899999999987               234899999999999999999999999999998765322100         


Q ss_pred             ------CCCCCC-ccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCC-CCc
Q 017335           67 ------PKLPLP-VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTS  138 (373)
Q Consensus        67 ------~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~-G~~  138 (373)
                            ....+| .++|||++|+|+++|++|++|++||||++.+. .|..|..|..+.++.|++...   .|+..+ |  
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~~G--  179 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETNFG--  179 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSSSC--
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCCCC--
Confidence                  001467 69999999999999999999999999998654 688999999999999988775   566543 5  


Q ss_pred             cccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHH--hCCCCCCEEEEECC-ChHH
Q 017335          139 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVG  215 (373)
Q Consensus       139 ~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~--~~~~~~~~VlI~G~-G~vG  215 (373)
                                       +|+||+++|+++++++|+++++++||+++++++|||+++...  .++++|++|||+|+ |++|
T Consensus       180 -----------------~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG  242 (456)
T 3krt_A          180 -----------------GLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLG  242 (456)
T ss_dssp             -----------------SSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHH
T ss_pred             -----------------cccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHH
Confidence                             999999999999999999999999999999999999977654  78999999999998 9999


Q ss_pred             HHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC--------------ccHHHHHHHhcCC-CccEEEEC
Q 017335          216 LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD--------------KTVSQVIKEMTDG-GADYCFEC  280 (373)
Q Consensus       216 ~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~--------------~~~~~~i~~~~~~-~~d~vid~  280 (373)
                      ++++|+|+.+|+ +|++++++++++++++++|+++++++.+...              .++.+.+++++++ ++|+||||
T Consensus       243 ~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~  321 (456)
T 3krt_A          243 SYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEH  321 (456)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEEC
T ss_pred             HHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEc
Confidence            999999999999 8999999999999999999999999876211              1245788888887 99999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---Cc
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SS  356 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~  356 (373)
                      +|+ ..+..++++++++ |+++.+|... +...+++...++. ++++.|+..+.   ..++.++++++++|++++   +.
T Consensus       322 ~G~-~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~  395 (456)
T 3krt_A          322 PGR-ETFGASVFVTRKG-GTITTCASTS-GYMHEYDNRYLWMSLKRIIGSHFAN---YREAWEANRLIAKGRIHPTLSKV  395 (456)
T ss_dssp             SCH-HHHHHHHHHEEEE-EEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             CCc-hhHHHHHHHhhCC-cEEEEEecCC-CcccccCHHHHHhcCeEEEEeccCC---HHHHHHHHHHHHcCCcccceeEE
Confidence            998 4599999999997 9999999753 3445677766666 89999997655   567888999999999986   78


Q ss_pred             ccccCCCcccccc
Q 017335          357 FHLCDPNSDSAGL  369 (373)
Q Consensus       357 ~~~~~~~~a~~~~  369 (373)
                      |+++++++|+..+
T Consensus       396 ~~l~~~~eA~~~l  408 (456)
T 3krt_A          396 YSLEDTGQAAYDV  408 (456)
T ss_dssp             EEGGGHHHHHHHH
T ss_pred             EcHHHHHHHHHHH
Confidence            9999999988653

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.2e-50  Score=402.68  Aligned_cols=329  Identities=16%  Similarity=0.160  Sum_probs=277.9

Q ss_pred             CCcccceeeEEeecCC-------------CCeEEEEEecCCCCCCeEEEEEeeeeccccchhccc---------------
Q 017335           10 AGKVIRCKAAICRIPG-------------KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK---------------   61 (373)
Q Consensus        10 ~~~~~~~ka~~~~~~~-------------~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~---------------   61 (373)
                      .++|.||||+++.+++             +.++++++|.|+|+++||||||.++|||++|++...               
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~   98 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR   98 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence            4789999999999987             239999999999999999999999999999985432               


Q ss_pred             -CCCCCCCCCCC-ccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCC-CCc
Q 017335           62 -SSTDLPKLPLP-VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTS  138 (373)
Q Consensus        62 -g~~~~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~-G~~  138 (373)
                       +.+... ..+| .++|||++|+|+++|++|++|++||||++.+...|+.|. |..+.++.|.+...   .|+..+ |  
T Consensus        99 ~g~~~~~-~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~---~G~~~~~G--  171 (447)
T 4a0s_A           99 QGGWATR-HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRA---WGFETNFG--  171 (447)
T ss_dssp             TCGGGGG-GCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEE---TTTTSSSC--
T ss_pred             cCccccc-cCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-cccccccccccccc---ccccCCCC--
Confidence             111111 1466 699999999999999999999999999999988888776 44578999988775   566543 5  


Q ss_pred             cccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHH--HhCCCCCCEEEEECC-ChHH
Q 017335          139 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVG  215 (373)
Q Consensus       139 ~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~--~~~~~~~~~VlI~G~-G~vG  215 (373)
                                       +|+||+++|+++++++|+++++++|++++++++|||+++.+  ..++++|++|||+|+ |++|
T Consensus       172 -----------------~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG  234 (447)
T 4a0s_A          172 -----------------GLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLG  234 (447)
T ss_dssp             -----------------SSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHH
T ss_pred             -----------------ceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHH
Confidence                             99999999999999999999999999999999999997754  488999999999998 9999


Q ss_pred             HHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC---------------ccHHHHHHHhcCCCccEEEEC
Q 017335          216 LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD---------------KTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       216 ~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~---------------~~~~~~i~~~~~~~~d~vid~  280 (373)
                      ++++|+|+.+|+ +|+++++++++++.++++|+++++++.+...               ..+.+.+++.+++++|+|||+
T Consensus       235 ~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~  313 (447)
T 4a0s_A          235 SYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEH  313 (447)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEEC
T ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEEC
Confidence            999999999999 9999999999999999999999998754110               113677888884489999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---Cc
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SS  356 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~  356 (373)
                      +|... ++.++++++++ |+++.+|... +...+++...++. ++++.|+..+.   .+++.++++++++|++++   +.
T Consensus       314 ~G~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~i~~~  387 (447)
T 4a0s_A          314 TGRVT-FGLSVIVARRG-GTVVTCGSSS-GYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVVPAMSAV  387 (447)
T ss_dssp             SCHHH-HHHHHHHSCTT-CEEEESCCTT-CSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             CCchH-HHHHHHHHhcC-CEEEEEecCC-CcccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcccceeEE
Confidence            99864 89999999997 9999999753 3345667766666 89999986554   577889999999999986   78


Q ss_pred             ccccCCCcccccc
Q 017335          357 FHLCDPNSDSAGL  369 (373)
Q Consensus       357 ~~~~~~~~a~~~~  369 (373)
                      |+++++++|+..+
T Consensus       388 ~~l~~~~~A~~~~  400 (447)
T 4a0s_A          388 YPLAEAAEACRVV  400 (447)
T ss_dssp             EEGGGHHHHHHHH
T ss_pred             EcHHHHHHHHHHH
Confidence            9999999988653

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.6e-49  Score=383.00  Aligned_cols=302  Identities=19%  Similarity=0.175  Sum_probs=266.4

Q ss_pred             CcccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           11 GKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      .+|.+|||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|+
T Consensus        24 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~E~~G~V~~vG~  102 (353)
T 4dup_A           24 SLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPK-DASPILGLELSGEIVGVGP  102 (353)
T ss_dssp             CCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCT-TSCSSSCCEEEEEEEEECT
T ss_pred             CCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCCccccccEEEEEEECC
Confidence            48899999999997754  99999999999999999999999999999999998876542 6789999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +|++|++||||+...                              .+                   |+|+||+.+|++.+
T Consensus       103 ~v~~~~vGdrV~~~~------------------------------~~-------------------G~~aey~~v~~~~~  133 (353)
T 4dup_A          103 GVSGYAVGDKVCGLA------------------------------NG-------------------GAYAEYCLLPAGQI  133 (353)
T ss_dssp             TCCSCCTTCEEEEEC------------------------------SS-------------------CCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEEec------------------------------CC-------------------CceeeEEEEcHHHc
Confidence            999999999997542                              12                   39999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      +++|+++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|
T Consensus       134 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lG  212 (353)
T 4dup_A          134 LPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLG  212 (353)
T ss_dssp             EECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHT
T ss_pred             EeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcC
Confidence            9999999999999999999999998878899999999999965 9999999999999999 9999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh-CcE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-GRS  325 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~  325 (373)
                      +++++++++   .++.+.+.+.+++++|++|||+|... ++.++++++++ |+++.+|..... ..+ ++...++. +++
T Consensus       213 a~~~~~~~~---~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~  286 (353)
T 4dup_A          213 AKRGINYRS---EDFAAVIKAETGQGVDIILDMIGAAY-FERNIASLAKD-GCLSIIAFLGGA-VAEKVNLSPIMVKRLT  286 (353)
T ss_dssp             CSEEEETTT---SCHHHHHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEE-EEEEECCCTTCS-EEEEEECHHHHHTTCE
T ss_pred             CCEEEeCCc---hHHHHHHHHHhCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEEecCCC-cccCCCHHHHHhcCce
Confidence            999999988   88999999988449999999999876 89999999997 999999975433 333 66666666 999


Q ss_pred             EEEeecCCCCch-------hHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          326 VCGTYFGGLKPR-------SDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       326 i~g~~~~~~~~~-------~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      +.|+..+.....       +.++++++++++|++++   +.|+++++++|++.+
T Consensus       287 i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l  340 (353)
T 4dup_A          287 VTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLL  340 (353)
T ss_dssp             EEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHH
T ss_pred             EEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHH
Confidence            999987665421       12788999999999986   789999999988754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.7e-48  Score=372.96  Aligned_cols=298  Identities=20%  Similarity=0.213  Sum_probs=263.6

Q ss_pred             cccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           12 KVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      +|.+|||+++.+++.+  ++++++|.|+|++|||||||.++|||++|++.+.|.++.   .+|.++|||++|+|+++|++
T Consensus         5 ~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~---~~P~i~G~e~~G~V~~vG~~   81 (334)
T 3qwb_A            5 IPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC---EKPYVLGREASGTVVAKGKG   81 (334)
T ss_dssp             CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC---CSSEECCSEEEEEEEEECTT
T ss_pred             CchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCccccceEEEEEEECCC
Confidence            7889999999998865  899999999999999999999999999999999987653   58999999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee-ccce
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHV  168 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~  168 (373)
                      |++|++||||+...                               +                   |+|+||+.+| ++.+
T Consensus        82 v~~~~~GdrV~~~~-------------------------------~-------------------G~~aey~~v~~~~~~  111 (334)
T 3qwb_A           82 VTNFEVGDQVAYIS-------------------------------N-------------------STFAQYSKISSQGPV  111 (334)
T ss_dssp             CCSCCTTCEEEEEC-------------------------------S-------------------SCSBSEEEEETTSSE
T ss_pred             CCCCCCCCEEEEee-------------------------------C-------------------CcceEEEEecCcceE
Confidence            99999999998642                               1                   3899999999 9999


Q ss_pred             EEcCCCCChhh---hhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          169 VKITPHIPLGI---ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       169 ~~lP~~l~~~~---aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +++|+++++++   ++++++..+|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++
T Consensus       112 ~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~  190 (334)
T 3qwb_A          112 MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAK  190 (334)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             EECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence            99999999999   88888899999998877789999999999995 9999999999999999 9999999999999999


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-  322 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-  322 (373)
                      ++|+++++++++   .++.+.+.+.+++ ++|+||||+|... ++.++++++++ |+++.+|.... ...+++...+.. 
T Consensus       191 ~~ga~~~~~~~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~  264 (334)
T 3qwb_A          191 EYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVGKDT-FEISLAALKRK-GVFVSFGNASG-LIPPFSITRLSPK  264 (334)
T ss_dssp             HTTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEECCGGGG-HHHHHHHEEEE-EEEEECCCTTC-CCCCBCGGGGTTT
T ss_pred             HcCCcEEEeCCC---chHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhccC-CEEEEEcCCCC-CCCCcchhhhhhC
Confidence            999999999988   8899999999877 8999999999855 99999999997 99999998543 333566666666 


Q ss_pred             CcEEEEeecCCCC-ch----hHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          323 GRSVCGTYFGGLK-PR----SDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 ~~~i~g~~~~~~~-~~----~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++++.++.++.+. ..    +.++++++++++|++++   +.|+++++.+|++.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  319 (334)
T 3qwb_A          265 NITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADI  319 (334)
T ss_dssp             TCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHH
T ss_pred             ceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHH
Confidence            8999987654432 12    33578999999999987   789999999988654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=7.7e-50  Score=387.03  Aligned_cols=311  Identities=18%  Similarity=0.282  Sum_probs=263.4

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCC-CeEEEEEeeeeccccchhcccC--CCCCCCCCC---CccccCcccEEEEEeCCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKS--STDLPKLPL---PVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g--~~~~~~~~~---p~~~G~e~~G~V~~vG~~   89 (373)
                      |||+++.+++++++++++|.|+|++ +||||||.++|||++|++.+.|  .++..  .+   |.++|||++|+|++  ++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~--~~~~~p~v~G~E~~G~V~~--~~   76 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTL--PKGKDFLVLGHEAIGVVEE--SY   76 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC---------CCSCEECCSEEEEEECS--CC
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCC--CcCCCCCcCCcceEEEEEe--CC
Confidence            7999999988669999999999999 9999999999999999999988  54422  46   89999999999999  66


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCC--CCC-CCCCccccccCCceecccccccceeeeEEeecc
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP--NMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT  166 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~--g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  166 (373)
                       ++|++||||++.+...|+.|.+|+.|++++|++...   .  |+. .+|                   +|+||+++|++
T Consensus        77 -~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~~~g~~~~~G-------------------~~aey~~v~~~  133 (366)
T 2cdc_A           77 -HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEF---GEAGIHKMDG-------------------FMREWWYDDPK  133 (366)
T ss_dssp             -SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCC---EEETTBEECC-------------------SCBSEEEECGG
T ss_pred             -CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCc---ccCCccCCCC-------------------ceeEEEEechH
Confidence             889999999999999999999999999999987653   2  333 345                   99999999999


Q ss_pred             ceEEcCCCCChhhhhccchhhhhHHHHHH--H--HhCCC--C-------CCEEEEECCChHHHHHHHHHHHCCCCeEEEE
Q 017335          167 HVVKITPHIPLGIACLLSCGVSTGVGAAW--K--VAGVE--V-------GSTVAIFGLGAVGLAVAEGARLNRASKIIGV  233 (373)
Q Consensus       167 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~--~--~~~~~--~-------~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~  233 (373)
                      .++++|++++ ++|+ ++.+++|||+++.  +  ..+++  +       |++|||+|+|++|++++|+++.+|+ +|+++
T Consensus       134 ~~~~iP~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~  210 (366)
T 2cdc_A          134 YLVKIPKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMA  210 (366)
T ss_dssp             GEEEECGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEE
T ss_pred             HeEECcCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEE
Confidence            9999999999 8775 6679999999876  4  77888  8       9999999999999999999999999 99999


Q ss_pred             cCCh---hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHH-HHHHHHhccCCceEEEEcccCC
Q 017335          234 DINP---EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       234 ~~~~---~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      ++++   ++.++++++|++++ | ++    ++.+.+.+ +++++|+|||++|....+ +.++++++++ |+++.+|....
T Consensus       211 ~~~~~~~~~~~~~~~~ga~~v-~-~~----~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~  282 (366)
T 2cdc_A          211 NRREPTEVEQTVIEETKTNYY-N-SS----NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTS  282 (366)
T ss_dssp             ESSCCCHHHHHHHHHHTCEEE-E-CT----TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCS
T ss_pred             eCCccchHHHHHHHHhCCcee-c-hH----HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence            9998   89999999999988 6 42    45555655 446899999999987658 9999999997 99999998543


Q ss_pred             CCccccCHHH---Hhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCC------CC---CcccccCCCccccc
Q 017335          310 GSPISLNSIE---ILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVH------LR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       310 ~~~~~~~~~~---~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i------~~---~~~~~~~~~~a~~~  368 (373)
                       ...+++...   ++. ++++.|+..+.   .++++++++++++|++      .+   +.|+++++.+|++.
T Consensus       283 -~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~  350 (366)
T 2cdc_A          283 -GSVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKV  350 (366)
T ss_dssp             -CEEEEEHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHH
T ss_pred             -CccccChhhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHH
Confidence             235666665   555 99999986543   6889999999999994      33   68999999999876

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.2e-48  Score=371.03  Aligned_cols=299  Identities=18%  Similarity=0.219  Sum_probs=256.9

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      +|.+|||+++.+++++++++++|.|+|++|||||||.+++||++|++.+.|..+.....+|.++|||++|+|+++|++|+
T Consensus         4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence            46789999999998889999999999999999999999999999999998875332127899999999999999999999


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      +|++||||+....                          |.. .+|                   +|+||+.+|++.+++
T Consensus        84 ~~~vGdrV~~~~~--------------------------g~~~~~G-------------------~~aey~~v~~~~~~~  118 (343)
T 3gaz_A           84 SFRVGDAVFGLTG--------------------------GVGGLQG-------------------THAQFAAVDARLLAS  118 (343)
T ss_dssp             SCCTTCEEEEECC--------------------------SSTTCCC-------------------SSBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEEeC--------------------------CCCCCCc-------------------ceeeEEEecHHHeee
Confidence            9999999986421                          111 234                   999999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      +|+++++++|++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++ .+++++++++++|++
T Consensus       119 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~  196 (343)
T 3gaz_A          119 KPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGAT  196 (343)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSE
T ss_pred             CCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCC
Confidence            99999999999999999999998878899999999999995 9999999999999999 99999 799999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEE
Q 017335          250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC  327 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~  327 (373)
                      . ++ +.   .++.+.+.+.+++ ++|+||||+|++. ++.++++++++ |+++.+|...     +++...+.. ++++.
T Consensus       197 ~-i~-~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~-----~~~~~~~~~~~~~~~  264 (343)
T 3gaz_A          197 P-ID-AS---REPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRF-GHVVSCLGWG-----THKLAPLSFKQATYS  264 (343)
T ss_dssp             E-EE-TT---SCHHHHHHHHHTTSCEEEEEESSCTHH-HHHHHHHEEEE-EEEEESCCCS-----CCCCHHHHHTTCEEE
T ss_pred             E-ec-cC---CCHHHHHHHHhcCCCceEEEECCCcHH-HHHHHHHHhcC-CeEEEEcccC-----ccccchhhhcCcEEE
Confidence            8 77 55   6888899999887 9999999999865 99999999997 9999998743     234445555 99999


Q ss_pred             EeecCCC-----C---chhHHHHHHHHHHcCCCCC----CcccccCCCcccccc
Q 017335          328 GTYFGGL-----K---PRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       328 g~~~~~~-----~---~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~~~  369 (373)
                      |+.....     .   ..++++++++++++|++++    +.|+++++++|++.+
T Consensus       265 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~  318 (343)
T 3gaz_A          265 GVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAV  318 (343)
T ss_dssp             ECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHH
T ss_pred             EEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHH
Confidence            9753211     0   1367999999999999975    489999999988754

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.1e-48  Score=377.57  Aligned_cols=306  Identities=17%  Similarity=0.153  Sum_probs=253.0

Q ss_pred             CcccceeeEEeecCCCCeEEE-EEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           11 GKVIRCKAAICRIPGKPLVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      .+|.+|||+++.++++ ++++ ++|.|+|+++||||||.+++||++|++.+.+.   .  .+|.++|||++|+|+++|++
T Consensus         7 ~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~--~~p~v~G~e~~G~V~~vG~~   80 (371)
T 3gqv_A            7 IPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---A--TPWAFLGTDYAGTVVAVGSD   80 (371)
T ss_dssp             CCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------C--CTTSCCCSEEEEEEEEECTT
T ss_pred             CCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---C--CCCccCccccEEEEEEeCCC
Confidence            3788999999999977 9999 99999999999999999999999999988763   2  57899999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  169 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  169 (373)
                      |++|++||||+.       .|..|..               |...+|                   +|+||+.+|++.++
T Consensus        81 v~~~~~GdrV~~-------~~~~~~~---------------~~~~~G-------------------~~aey~~v~~~~~~  119 (371)
T 3gqv_A           81 VTHIQVGDRVYG-------AQNEMCP---------------RTPDQG-------------------AFSQYTVTRGRVWA  119 (371)
T ss_dssp             CCSCCTTCEEEE-------ECCTTCT---------------TCTTCC-------------------SSBSEEECCTTCEE
T ss_pred             CCCCCCCCEEEE-------eccCCCC---------------CCCCCC-------------------cCcCeEEEchhheE
Confidence            999999999964       3555543               223345                   99999999999999


Q ss_pred             EcCCCCChhhhhccchhhhhHHHHHHHH-hCC-----------CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          170 KITPHIPLGIACLLSCGVSTGVGAAWKV-AGV-----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       170 ~lP~~l~~~~aa~l~~~~~ta~~~~~~~-~~~-----------~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      ++|+++++++|+++++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+.+|+ +|+++. +
T Consensus       120 ~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~  197 (371)
T 3gqv_A          120 KIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-S  197 (371)
T ss_dssp             ECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-C
T ss_pred             ECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-C
Confidence            9999999999999999999999988777 553           89999999999 8999999999999999 899987 7


Q ss_pred             hhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHh-ccCCceEEEEcccCCC----C
Q 017335          237 PEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHG----S  311 (373)
Q Consensus       237 ~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~G~~~~~----~  311 (373)
                      ++++++++++|+++++|+++   .++.+.+++++++++|+||||+|++.+++.+++++ +++ |+++.+|.....    .
T Consensus       198 ~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~  273 (371)
T 3gqv_A          198 PHNFDLAKSRGAEEVFDYRA---PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRK  273 (371)
T ss_dssp             GGGHHHHHHTTCSEEEETTS---TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCS
T ss_pred             HHHHHHHHHcCCcEEEECCC---chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCcccccccc
Confidence            89999999999999999988   88999999999888999999999988899999999 587 999999964431    1


Q ss_pred             ccccC---HHHHhh-CcEEEEeecCCCCc------hhHHHHHHHHHHcCCCCCC-----cccccCCCcccccc
Q 017335          312 PISLN---SIEILK-GRSVCGTYFGGLKP------RSDIATLAQKYLDKVHLRS-----SFHLCDPNSDSAGL  369 (373)
Q Consensus       312 ~~~~~---~~~~~~-~~~i~g~~~~~~~~------~~~~~~~~~~~~~g~i~~~-----~~~~~~~~~a~~~~  369 (373)
                      .++.+   ...++. ++++.|+.......      .+.++++++++++|++++.     .|+++++.+|++.+
T Consensus       274 ~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l  346 (371)
T 3gqv_A          274 MVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELV  346 (371)
T ss_dssp             CEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHH
T ss_pred             ccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHH
Confidence            12211   223444 88888775443321      1234588899999999873     37788888887643

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1e-48  Score=375.86  Aligned_cols=302  Identities=21%  Similarity=0.249  Sum_probs=255.5

Q ss_pred             CCCCcccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEE
Q 017335            8 PKAGKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES   85 (373)
Q Consensus         8 ~~~~~~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~   85 (373)
                      +.+++|.+|||+++.+++.+  ++++++|.|+|++|||||||.++|||++|++.+.|.++... .+|.++|||++|+|++
T Consensus        14 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~   92 (342)
T 4eye_A           14 AQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKM-EPPFVPGIETAGVVRS   92 (342)
T ss_dssp             ----CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCC-CSSBCCCSEEEEEEEE
T ss_pred             ccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCCccceeEEEEEEE
Confidence            34578999999999987655  99999999999999999999999999999999998765432 7899999999999999


Q ss_pred             eCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335           86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        86 vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      +|++++ |++||||+...                              .+|                   +|+||+.+|+
T Consensus        93 vG~~v~-~~vGDrV~~~~------------------------------~~G-------------------~~aey~~v~~  122 (342)
T 4eye_A           93 APEGSG-IKPGDRVMAFN------------------------------FIG-------------------GYAERVAVAP  122 (342)
T ss_dssp             CCTTSS-CCTTCEEEEEC------------------------------SSC-------------------CSBSEEEECG
T ss_pred             ECCCCC-CCCCCEEEEec------------------------------CCC-------------------cceEEEEEcH
Confidence            999999 99999998642                              123                   9999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +.++++|+++++++|++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       123 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~  201 (342)
T 4eye_A          123 SNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVK  201 (342)
T ss_dssp             GGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHH
T ss_pred             HHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999998878899999999999998 9999999999999999 9999999999999999


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-  322 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-  322 (373)
                      ++|++++++++    .++.+.+++.+++ ++|+||||+|.+. +..++++++++ |+++.+|..... ..+++...++. 
T Consensus       202 ~~ga~~v~~~~----~~~~~~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~  274 (342)
T 4eye_A          202 SVGADIVLPLE----EGWAKAVREATGGAGVDMVVDPIGGPA-FDDAVRTLASE-GRLLVVGFAAGG-IPTIKVNRLLLR  274 (342)
T ss_dssp             HHTCSEEEESS----TTHHHHHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEE-EEEEEC-----------CCCCGGGT
T ss_pred             hcCCcEEecCc----hhHHHHHHHHhCCCCceEEEECCchhH-HHHHHHhhcCC-CEEEEEEccCCC-CCccCHHHHhhc
Confidence            99999999876    4788899999988 9999999999875 89999999997 999999975432 23445445555 


Q ss_pred             CcEEEEeecCCC----C--chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          323 GRSVCGTYFGGL----K--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 ~~~i~g~~~~~~----~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++++.|+..+.+    .  ..++++++++++++| +.+   +.|+++++.+|+..+
T Consensus       275 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~  329 (342)
T 4eye_A          275 NASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDF  329 (342)
T ss_dssp             TCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHH
T ss_pred             CCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHH
Confidence            999999875432    1  136789999999999 775   789999999988754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.3e-48  Score=374.83  Aligned_cols=299  Identities=23%  Similarity=0.249  Sum_probs=259.0

Q ss_pred             cccceeeEEeecCCCC---eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           12 KVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~---l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      |+++|||+++.+++++   ++++++|.|+|++|||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|+
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~E~~G~V~~vG~   79 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRI-PLPNIPGYEGVGIVENVGA   79 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTS-CSSBCCCSCCEEEEEEECT
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCC-CCCCcCCcceEEEEEEeCC
Confidence            4578999999999886   89999999999999999999999999999999998865432 7899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +|++|++||||+...                              .+|                   +|+||+.+|++.+
T Consensus        80 ~v~~~~vGdrV~~~~------------------------------~~G-------------------~~aey~~v~~~~~  110 (340)
T 3gms_A           80 FVSRELIGKRVLPLR------------------------------GEG-------------------TWQEYVKTSADFV  110 (340)
T ss_dssp             TSCGGGTTCEEEECS------------------------------SSC-------------------SSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEecC------------------------------CCc-------------------cceeEEEcCHHHe
Confidence            999999999997431                              123                   9999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      +++|+++++++||++++..+|||.++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|
T Consensus       111 ~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lg  189 (340)
T 3gms_A          111 VPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLG  189 (340)
T ss_dssp             EECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHT
T ss_pred             EECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCC
Confidence            9999999999999999999999998889999999999999998 5999999999999999 9999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh--Cc
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GR  324 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~  324 (373)
                      +++++|+++   .++.+.+.+.+++ ++|++|||+|... ...++++++++ |+++.+|.... .  +++...+..  ++
T Consensus       190 a~~~~~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~--~~~~~~~~~~~~~  261 (340)
T 3gms_A          190 AAYVIDTST---APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG-I--QVNWAEIVTKAKV  261 (340)
T ss_dssp             CSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTS-C--CCCHHHHHHTSCC
T ss_pred             CcEEEeCCc---ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCC-C--CCCHHHhhhcccc
Confidence            999999987   8899999999988 9999999999887 56677999997 99999998533 2  344444443  55


Q ss_pred             EEEEeecCCC-------CchhHHHHHHHHHHcCCCCC----CcccccCCCcccccc
Q 017335          325 SVCGTYFGGL-------KPRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~-------~~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~~~  369 (373)
                      ++....+..+       ...++++++++++++|++++    +.|+++++.+|++.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~  317 (340)
T 3gms_A          262 HANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAAVDVV  317 (340)
T ss_dssp             EEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHH
T ss_pred             eEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHHHHHHH
Confidence            5554432211       12467999999999999986    679999999988754

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.8e-48  Score=372.98  Aligned_cols=301  Identities=16%  Similarity=0.153  Sum_probs=256.1

Q ss_pred             CCcccceeeEEeecC---CC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEE
Q 017335           10 AGKVIRCKAAICRIP---GK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE   84 (373)
Q Consensus        10 ~~~~~~~ka~~~~~~---~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~   84 (373)
                      +..+++|||++++++   +.  .++++++|.|+|+++||||||.++|||++|++.+.|..+..  .+|.++|||++|+|+
T Consensus        17 ~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~   94 (363)
T 4dvj_A           17 NLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDG--TDWKVIGYDAAGIVS   94 (363)
T ss_dssp             --CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC----CCSBCCCCCEEEEEE
T ss_pred             hhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCC--CCCCcccceeEEEEE
Confidence            456788999999865   22  29999999999999999999999999999999999887655  789999999999999


Q ss_pred             EeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee
Q 017335           85 SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD  164 (373)
Q Consensus        85 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  164 (373)
                      ++|++|++|++||||+...                           +...+|                   +|+||+.+|
T Consensus        95 ~vG~~v~~~~vGdrV~~~~---------------------------~~~~~G-------------------~~aey~~v~  128 (363)
T 4dvj_A           95 AVGPDVTLFRPGDEVFYAG---------------------------SIIRPG-------------------TNAEFHLVD  128 (363)
T ss_dssp             EECTTCCSCCTTCEEEECC---------------------------CTTSCC-------------------SCBSEEEEE
T ss_pred             EeCCCCCCCCCCCEEEEcc---------------------------CCCCCc-------------------cceEEEEeC
Confidence            9999999999999998532                           222334                   999999999


Q ss_pred             ccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCC-----CCCEEEEECC-ChHHHHHHHHHHH-CCCCeEEEEcCCh
Q 017335          165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE-----VGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINP  237 (373)
Q Consensus       165 ~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~-----~~~~VlI~G~-G~vG~~a~~la~~-~G~~~Vi~~~~~~  237 (373)
                      ++.++++|+++++++||+++++++|||+++.+..+++     +|++|||+|+ |++|++++|+||. .|+ +|+++++++
T Consensus       129 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~  207 (363)
T 4dvj_A          129 ERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRP  207 (363)
T ss_dssp             GGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSH
T ss_pred             HHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCH
Confidence            9999999999999999999999999999888888888     8999999995 9999999999998 477 999999999


Q ss_pred             hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH
Q 017335          238 EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS  317 (373)
Q Consensus       238 ~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~  317 (373)
                      +++++++++|+++++|+++    ++.+.+++..++++|+||||+|++..++.++++++++ |+++.+|..     .+++.
T Consensus       208 ~~~~~~~~lGad~vi~~~~----~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-----~~~~~  277 (363)
T 4dvj_A          208 ETQEWVKSLGAHHVIDHSK----PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDP-----SAFDI  277 (363)
T ss_dssp             HHHHHHHHTTCSEEECTTS----CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCC-----SSCCG
T ss_pred             HHHHHHHHcCCCEEEeCCC----CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCC-----Cccch
Confidence            9999999999999999864    6888888885459999999999887799999999997 999999642     24566


Q ss_pred             HHHhh-CcEEEEeecCCC-----Cc----hhHHHHHHHHHHcCCCCC---C---cccccCCCcccccc
Q 017335          318 IEILK-GRSVCGTYFGGL-----KP----RSDIATLAQKYLDKVHLR---S---SFHLCDPNSDSAGL  369 (373)
Q Consensus       318 ~~~~~-~~~i~g~~~~~~-----~~----~~~~~~~~~~~~~g~i~~---~---~~~~~~~~~a~~~~  369 (373)
                      ..+.. ++++.++.....     ..    .+.++++++++++|++++   +   .|+++++.+|+..+
T Consensus       278 ~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~  345 (363)
T 4dvj_A          278 MLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALV  345 (363)
T ss_dssp             GGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHH
T ss_pred             HHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHH
Confidence            66666 899998754321     11    366899999999999987   2   34889988887654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3.6e-49  Score=379.96  Aligned_cols=304  Identities=14%  Similarity=0.143  Sum_probs=256.3

Q ss_pred             CCCCcccceeeEEee--c---CCCCeEEEEE---------ecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCc
Q 017335            8 PKAGKVIRCKAAICR--I---PGKPLVIEEI---------EVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV   73 (373)
Q Consensus         8 ~~~~~~~~~ka~~~~--~---~~~~l~~~~~---------~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~   73 (373)
                      +.-++|.+|||++++  +   ..+.++++++         |.|+|++|||||||.++|||++|++.+.|.++... .+|.
T Consensus         3 s~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~p~   81 (349)
T 3pi7_A            3 SPMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPR-VKGR   81 (349)
T ss_dssp             --CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCB-CTTS
T ss_pred             CCCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCC-CCCC
Confidence            334478899999999  2   2233777777         99999999999999999999999999998765432 6899


Q ss_pred             cccCcccEEEEEeCCCC-CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccc
Q 017335           74 IFGHEAVGVVESVGEYV-EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFL  152 (373)
Q Consensus        74 ~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~  152 (373)
                      ++|||++|+|+++|++| ++|++||||++..                           |...+|                
T Consensus        82 v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~---------------------------g~~~~G----------------  118 (349)
T 3pi7_A           82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT---------------------------GLSNWG----------------  118 (349)
T ss_dssp             BCCSEEEEEEEEECSSHHHHHHTTCEEEEEC---------------------------TTSSCC----------------
T ss_pred             CccceEEEEEEEECCCccCCCCCCCEEEEec---------------------------cCCCCc----------------
Confidence            99999999999999999 9999999998652                           333345                


Q ss_pred             cccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCC-CEEEEECC-ChHHHHHHHHHHHCCCCeE
Q 017335          153 NISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG-STVAIFGL-GAVGLAVAEGARLNRASKI  230 (373)
Q Consensus       153 ~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~-~~VlI~G~-G~vG~~a~~la~~~G~~~V  230 (373)
                         +|+||+.+|++.++++|+++++++||++++..+|||+ +.+..+ +++ ++|||+|+ |++|++++|+|+.+|+ +|
T Consensus       119 ---~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~V  192 (349)
T 3pi7_A          119 ---SWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RP  192 (349)
T ss_dssp             ---SSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EE
T ss_pred             ---cceeeEeechHHeEECCCCCCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EE
Confidence               9999999999999999999999999999999999996 556666 666 78999865 9999999999999999 99


Q ss_pred             EEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          231 IGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       231 i~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      ++++++++++++++++|+++++|+++   .++.+.+++.+++ ++|+||||+|... +..++++++++ |+++.+|....
T Consensus       193 i~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~  267 (349)
T 3pi7_A          193 IVTVRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKR-ARWIIYGRLDP  267 (349)
T ss_dssp             EEEESCGGGHHHHHHHTCSEEEETTS---TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTT-CEEEECCCSCC
T ss_pred             EEEeCCHHHHHHHHHcCCCEEEECCc---HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCC-CEEEEEeccCC
Confidence            99999999999999999999999987   8899999999887 9999999999877 78999999997 99999997433


Q ss_pred             CCccccCH-HHHhh-CcEEEEeecCCCC------chhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335          310 GSPISLNS-IEILK-GRSVCGTYFGGLK------PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA  367 (373)
Q Consensus       310 ~~~~~~~~-~~~~~-~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~  367 (373)
                       ...+++. ..++. ++++.|+..+.+.      ..++++++++++++|++++   +.|+++++.+|++
T Consensus       268 -~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~  335 (349)
T 3pi7_A          268 -DATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVP  335 (349)
T ss_dssp             -SCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHH
T ss_pred             -CCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHH
Confidence             3445665 56665 9999998754421      1367888999999999975   7899999999887

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.3e-47  Score=366.98  Aligned_cols=296  Identities=20%  Similarity=0.200  Sum_probs=254.2

Q ss_pred             cceeeEEeecCC-----CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           14 IRCKAAICRIPG-----KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        14 ~~~ka~~~~~~~-----~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      |+|||++++++|     +.++++++|.|+|++|||||||.+++||++|++.+.|.  ..  .+|.++|||++|+|+++|+
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~--~~p~i~G~e~~G~V~~vG~   76 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VS--KAPRVLGFDAIGVVESVGN   76 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CS--SSCBCCCCCEEEEEEEECT
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CC--CCCcCcCCccEEEEEEeCC
Confidence            589999999876     34999999999999999999999999999999998886  22  6899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +|++|++||||+...                           +...+|                   +|+||+.+|++.+
T Consensus        77 ~v~~~~~GdrV~~~~---------------------------~~~~~G-------------------~~aey~~v~~~~~  110 (346)
T 3fbg_A           77 EVTMFNQGDIVYYSG---------------------------SPDQNG-------------------SNAEYQLINERLV  110 (346)
T ss_dssp             TCCSCCTTCEEEECC---------------------------CTTSCC-------------------SSBSEEEEEGGGE
T ss_pred             CCCcCCCCCEEEEcC---------------------------CCCCCc-------------------ceeEEEEEChHHe
Confidence            999999999998532                           112234                   9999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCC------CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHH
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE------VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE  241 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~------~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~  241 (373)
                      +++|+++++++|++++++++|||+++.+..+++      +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++
T Consensus       111 ~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~  189 (346)
T 3fbg_A          111 AKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIE  189 (346)
T ss_dssp             EECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHH
T ss_pred             EECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence            999999999999999999999999888888998      9999999965 9999999999999999 9999999999999


Q ss_pred             HHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh
Q 017335          242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL  321 (373)
Q Consensus       242 ~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~  321 (373)
                      +++++|+++++++++    ++.+.+++..++++|+||||+|+...++.++++++++ |+++.+|..    ..+++...+.
T Consensus       190 ~~~~lGa~~vi~~~~----~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~----~~~~~~~~~~  260 (346)
T 3fbg_A          190 WTKKMGADIVLNHKE----SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAF----ENDQDLNALK  260 (346)
T ss_dssp             HHHHHTCSEEECTTS----CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCC----SSCBCGGGGT
T ss_pred             HHHhcCCcEEEECCc----cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCC----CCCCcccccc
Confidence            999999999999874    6888888884448999999999888789999999997 999998753    2245555666


Q ss_pred             h-CcEEEEeecCCC---C------chhHHHHHHHHHHcCCCCC---Ccc---cccCCCcccccc
Q 017335          322 K-GRSVCGTYFGGL---K------PRSDIATLAQKYLDKVHLR---SSF---HLCDPNSDSAGL  369 (373)
Q Consensus       322 ~-~~~i~g~~~~~~---~------~~~~~~~~~~~~~~g~i~~---~~~---~~~~~~~a~~~~  369 (373)
                      . ++++.++.....   .      ..+.++++++++++|++++   +.|   +++++.+|+..+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~  324 (346)
T 3fbg_A          261 PKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQIL  324 (346)
T ss_dssp             TTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHH
T ss_pred             ccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHH
Confidence            5 899998754321   0      1366899999999999987   344   889998888654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2e-47  Score=364.21  Aligned_cols=297  Identities=22%  Similarity=0.228  Sum_probs=258.3

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++++++.+  ++++++|.|+|++|||||||.++|||++|++.+.|.++..  .+|.++|||++|+|+++|++|++|
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~e~~G~V~~vG~~v~~~   79 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAP--FLPSGLGAEGAGVVEAVGDEVTRF   79 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCC--CCCCCCCceeEEEEEEECCCCCCC
Confidence            999999998875  8999999999999999999999999999999999987664  789999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||||+...                             ..+|                   +|+||+.+|++.++++|+
T Consensus        80 ~~GdrV~~~~-----------------------------~~~G-------------------~~aey~~v~~~~~~~~P~  111 (325)
T 3jyn_A           80 KVGDRVAYGT-----------------------------GPLG-------------------AYSEVHVLPEANLVKLAD  111 (325)
T ss_dssp             CTTCEEEESS-----------------------------SSSC-------------------CSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEEec-----------------------------CCCc-------------------cccceEEecHHHeEECCC
Confidence            9999998532                             1123                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++|+++++..+|||.++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|+++++
T Consensus       112 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~  190 (325)
T 3jyn_A          112 SVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETI  190 (325)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            99999999999999999998888889999999999995 9999999999999999 999999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh--CcEEEEe
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGT  329 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~~i~g~  329 (373)
                      |+++   .++.+.+.+.+++ ++|++|||+|... +..++++++++ |+++.+|.... ...+++...+..  .+++.+.
T Consensus       191 ~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  264 (325)
T 3jyn_A          191 DYSH---EDVAKRVLELTDGKKCPVVYDGVGQDT-WLTSLDSVAPR-GLVVSFGNASG-PVSGVNLGILAQKDSVYVTRP  264 (325)
T ss_dssp             ETTT---SCHHHHHHHHTTTCCEEEEEESSCGGG-HHHHHTTEEEE-EEEEECCCTTC-CCCSCCTHHHHHTTSCEEECC
T ss_pred             eCCC---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhcCC-CEEEEEecCCC-CCCCCCHHHHhhcCcEEEEee
Confidence            9987   8899999999987 8999999999855 99999999997 99999998543 223566655554  4566654


Q ss_pred             ecCCCC-c----hhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          330 YFGGLK-P----RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       330 ~~~~~~-~----~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      .++.+. .    .+.++++++++++|++++   +.|+++++++|+..+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  312 (325)
T 3jyn_A          265 TLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIEL  312 (325)
T ss_dssp             CHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHH
T ss_pred             eeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHHH
Confidence            332211 1    234568999999999986   779999999988654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=7.5e-48  Score=370.75  Aligned_cols=299  Identities=19%  Similarity=0.269  Sum_probs=249.6

Q ss_pred             ccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           13 VIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      +|+|||+++++++.+  +++++.|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|++|
T Consensus         1 sm~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~e~~G~V~~vG~~v   79 (349)
T 4a27_A            1 SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPP-KTPLVPGFECSGIVEALGDSV   79 (349)
T ss_dssp             CCCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCSEEEEEEEEECTTC
T ss_pred             CceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCC-CCCccccceeEEEEEEeCCCC
Confidence            368999999998853  99999999999999999999999999999999998865432 789999999999999999999


Q ss_pred             CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335           91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  170 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  170 (373)
                      ++|++||||+....                              +                   |+|+||+.+|++.+++
T Consensus        80 ~~~~~GdrV~~~~~------------------------------~-------------------G~~aey~~v~~~~~~~  110 (349)
T 4a27_A           80 KGYEIGDRVMAFVN------------------------------Y-------------------NAWAEVVCTPVEFVYK  110 (349)
T ss_dssp             CSCCTTCEEEEECS------------------------------S-------------------CCSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEEecC------------------------------C-------------------CcceEEEEecHHHeEE
Confidence            99999999975431                              2                   3899999999999999


Q ss_pred             cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      +|+++++++|++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++.+.++ +|++
T Consensus       111 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~  188 (349)
T 4a27_A          111 IPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVT  188 (349)
T ss_dssp             CCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSS
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCc
Confidence            99999999999999999999998888899999999999998 99999999999999654899988 667888888 9999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---------------Cccc
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---------------SPIS  314 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---------------~~~~  314 (373)
                      ++++ ++   .++.+.+++.+++++|+||||+|++. ++.++++++++ |+++.+|.....               ...+
T Consensus       189 ~~~~-~~---~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (349)
T 4a27_A          189 HLFD-RN---ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEK  262 (349)
T ss_dssp             EEEE-TT---SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC------------------------
T ss_pred             EEEc-CC---ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccc
Confidence            9999 55   78999999988779999999999887 69999999997 999999974311               1123


Q ss_pred             cCHHHHhh-CcEEEEeecCCC----C----chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          315 LNSIEILK-GRSVCGTYFGGL----K----PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       315 ~~~~~~~~-~~~i~g~~~~~~----~----~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++...++. ++++.|+....+    .    ..++++++++++++|++++   +.|+++++++|++.+
T Consensus       263 ~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l  329 (349)
T 4a27_A          263 VNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRI  329 (349)
T ss_dssp             -CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHH
T ss_pred             cCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHH
Confidence            56666666 899999865321    1    1578999999999999987   789999999988754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.5e-47  Score=366.82  Aligned_cols=304  Identities=19%  Similarity=0.227  Sum_probs=257.5

Q ss_pred             CCCcccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEe
Q 017335            9 KAGKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV   86 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v   86 (373)
                      ...++.+|||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++
T Consensus        16 ~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~p~v~G~E~~G~V~~v   94 (354)
T 2j8z_A           16 ENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPP-GASNILGLEASGHVAEL   94 (354)
T ss_dssp             -----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCT-TSCSSSCSEEEEEEEEE
T ss_pred             cccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCC-CCCcccceeeEEEEEEE
Confidence            4467889999999998753  89999999999999999999999999999999988765432 57899999999999999


Q ss_pred             CCCC-CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335           87 GEYV-EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        87 G~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      |++| ++|++||||+...                              .+|                   +|+||+.+|+
T Consensus        95 G~~v~~~~~vGdrV~~~~------------------------------~~G-------------------~~aey~~v~~  125 (354)
T 2j8z_A           95 GPGCQGHWKIGDTAMALL------------------------------PGG-------------------GQAQYVTVPE  125 (354)
T ss_dssp             CSCC--CCCTTCEEEEEC------------------------------SSC-------------------CSBSEEEEEG
T ss_pred             CCCcCCCCCCCCEEEEec------------------------------CCC-------------------cceeEEEeCH
Confidence            9999 9999999998542                              123                   8999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +.++++|+++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++
T Consensus       126 ~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~  204 (354)
T 2j8z_A          126 GLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAE  204 (354)
T ss_dssp             GGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHH
T ss_pred             HHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999998878889999999999996 9999999999999999 9999999999999999


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH-HHHhh
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILK  322 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~~  322 (373)
                      ++|+++++|.++   .++.+.+.+.+++ ++|++|||+|... +..++++++++ |+++.+|.... ...+++. ..++.
T Consensus       205 ~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~  278 (354)
T 2j8z_A          205 KLGAAAGFNYKK---EDFSEATLKFTKGAGVNLILDCIGGSY-WEKNVNCLALD-GRWVLYGLMGG-GDINGPLFSKLLF  278 (354)
T ss_dssp             HHTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCGGG-HHHHHHHEEEE-EEEEECCCTTC-SCCCSCHHHHHHH
T ss_pred             HcCCcEEEecCC---hHHHHHHHHHhcCCCceEEEECCCchH-HHHHHHhccCC-CEEEEEeccCC-CccCCChhHHHHh
Confidence            999999999887   7888899888876 8999999999875 89999999997 99999997543 3346676 66665


Q ss_pred             -CcEEEEeecCCCCch------h-HHHHHHHHHHcC---CCCC---CcccccCCCcccccc
Q 017335          323 -GRSVCGTYFGGLKPR------S-DIATLAQKYLDK---VHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 -~~~i~g~~~~~~~~~------~-~~~~~~~~~~~g---~i~~---~~~~~~~~~~a~~~~  369 (373)
                       ++++.|+..+.....      . .++++++++++|   ++.+   +.|+++++.+|++.+
T Consensus       279 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~  339 (354)
T 2j8z_A          279 KRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYM  339 (354)
T ss_dssp             TTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHH
T ss_pred             CCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHH
Confidence             999999876554311      1 134688899999   7765   789999999887643

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2e-48  Score=369.61  Aligned_cols=286  Identities=14%  Similarity=0.108  Sum_probs=232.2

Q ss_pred             cceeeEEeec-CCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           14 IRCKAAICRI-PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        14 ~~~ka~~~~~-~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      .||||+++++ ++. ++++++|.|+|+++||||||.++|||++|++.+.|.++..  .+|.++|||++|+|+++|++|++
T Consensus         3 ~tMka~~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~   79 (315)
T 3goh_A            3 EQHQVWAYQTKTHS-VTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINW--SNGHVPGVDGAGVIVKVGAKVDS   79 (315)
T ss_dssp             CEEEEEEEETTTTE-EEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCC--CTTCCCCSEEEEEEEEECTTSCG
T ss_pred             cceEEEEEeCCCCe-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcC--CCCCEeeeeeEEEEEEeCCCCCC
Confidence            5799999995 544 9999999999999999999999999999999999887655  78999999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      |++||||+..+                           +...+|                   +|+||+.+|++.++++|
T Consensus        80 ~~vGdrV~~~~---------------------------~~~~~G-------------------~~aey~~v~~~~~~~iP  113 (315)
T 3goh_A           80 KMLGRRVAYHT---------------------------SLKRHG-------------------SFAEFTVLNTDRVMTLP  113 (315)
T ss_dssp             GGTTCEEEEEC---------------------------CTTSCC-------------------SSBSEEEEETTSEEECC
T ss_pred             CCCCCEEEEeC---------------------------CCCCCc-------------------ccccEEEEcHHHhccCc
Confidence            99999998753                           223344                   99999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      +++++++||+++++++|||+++ +..++++|++|||+|+|++|++++|+||.+|+ +|++++ +++++++++++|+++++
T Consensus       114 ~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~  190 (315)
T 3goh_A          114 DNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLY  190 (315)
T ss_dssp             TTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEE
T ss_pred             CCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEE
Confidence            9999999999999999999987 88999999999999999999999999999999 999999 99999999999999998


Q ss_pred             cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecC
Q 017335          253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG  332 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  332 (373)
                      +. .   +    +   + ++++|+||||+|++. +..++++++++ |+++.+|......  +++  .+.+++.+....+.
T Consensus       191 ~d-~---~----~---v-~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~--~~~--~~~~~~~~~~~~~~  252 (315)
T 3goh_A          191 RE-P---S----Q---V-TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRIPAP--IDP--AFTRTISYHEIALG  252 (315)
T ss_dssp             SS-G---G----G---C-CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGG
T ss_pred             cC-H---H----H---h-CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCCCcc--ccc--hhhhcceeeEEEee
Confidence            41 1   1    1   2 449999999999887 68899999997 9999998643221  121  11225555544332


Q ss_pred             C-----CC-----chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          333 G-----LK-----PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       333 ~-----~~-----~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      .     ..     ..+.++++++++++|++++   +.|+++++.+|++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  302 (315)
T 3goh_A          253 ALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHS  302 (315)
T ss_dssp             GHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHH
T ss_pred             cccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHHHHHHHHH
Confidence            1     11     1235788999999999986   789999999988653

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=1.7e-47  Score=369.46  Aligned_cols=302  Identities=20%  Similarity=0.245  Sum_probs=251.9

Q ss_pred             CcccceeeEEeecCCCC---eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335           11 GKVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~---l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      .||.+|||+++.+++.+   ++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~P~v~G~E~~G~V~~vG  100 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLP-ELPAVGGNEGVAQVVAVG  100 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCC-CSSEECCSCCEEEEEEEC
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCC-CCCccccceEEEEEEEeC
Confidence            57889999999999874   88999999999999999999999999999999998765432 579999999999999999


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      ++|++|++||||++.+.                             .+                   |+|+||+.+|++.
T Consensus       101 ~~v~~~~vGdrV~~~~~-----------------------------~~-------------------G~~aey~~v~~~~  132 (357)
T 1zsy_A          101 SNVTGLKPGDWVIPANA-----------------------------GL-------------------GTWRTEAVFSEEA  132 (357)
T ss_dssp             TTCCSCCTTCEEEESSS-----------------------------CS-------------------CCSBSEEEEEGGG
T ss_pred             CCCCCCCCCCEEEEcCC-----------------------------CC-------------------ccceeEEecCHHH
Confidence            99999999999986431                             12                   3999999999999


Q ss_pred             eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hHHHH
Q 017335          168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEI  242 (373)
Q Consensus       168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~----~~~~~  242 (373)
                      ++++|+++++++||+++++.+|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +++++.+++    +++++
T Consensus       133 ~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~  211 (357)
T 1zsy_A          133 LIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDR  211 (357)
T ss_dssp             EEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHH
T ss_pred             cEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHH
Confidence            99999999999999999899999998877789999999999998 9999999999999999 677665443    35678


Q ss_pred             HHHcCCceEEcCCCCCCccHHHHHHHhcCC--CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH
Q 017335          243 GKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI  320 (373)
Q Consensus       243 ~~~lga~~vi~~~~~~~~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~  320 (373)
                      ++++|+++++|+++    ...+.+.+.+.+  ++|+||||+|++. ...++++++++ |+++.+|... ....+++...+
T Consensus       212 ~~~lGa~~vi~~~~----~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~  284 (357)
T 1zsy_A          212 LKSLGAEHVITEEE----LRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMA-KQPVVASVSLL  284 (357)
T ss_dssp             HHHTTCSEEEEHHH----HHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCT-TCCBCCCHHHH
T ss_pred             HHhcCCcEEEecCc----chHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCC-CCCCCCCHHHH
Confidence            89999999998643    112344555554  5999999999877 56799999997 9999998643 33456777766


Q ss_pred             hh-CcEEEEeecCCC----C---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          321 LK-GRSVCGTYFGGL----K---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       321 ~~-~~~i~g~~~~~~----~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      +. ++++.|+..+.+    .   ..+.++++++++++|++++   +.|+++++.+|++.+
T Consensus       285 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~  344 (357)
T 1zsy_A          285 IFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEAS  344 (357)
T ss_dssp             HHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHH
T ss_pred             HhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHH
Confidence            65 999999865432    1   1356789999999999986   679999999887643

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-46  Score=360.34  Aligned_cols=298  Identities=21%  Similarity=0.268  Sum_probs=255.7

Q ss_pred             cccceeeEEeecCCCC--eEE-EEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           12 KVIRCKAAICRIPGKP--LVI-EEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~--l~~-~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      .|.+|||+++.+++.+  +++ +++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|+
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~P~v~G~E~~G~V~~vG~  104 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKP-LLPYTPGSDVAGVIEAVGD  104 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCC-CSSBCCCSCEEEEEEEECT
T ss_pred             CcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCCcCCceeEEEEEEECC
Confidence            4567999999987653  888 89999999999999999999999999999988764321 6899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +|++|++||||+....                             .+|                   +|+||+.+|++.+
T Consensus       105 ~v~~~~vGdrV~~~~~-----------------------------~~G-------------------~~aey~~v~~~~~  136 (351)
T 1yb5_A          105 NASAFKKGDRVFTSST-----------------------------ISG-------------------GYAEYALAADHTV  136 (351)
T ss_dssp             TCTTCCTTCEEEESCC-----------------------------SSC-------------------SSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEEeCC-----------------------------CCC-------------------cceeEEEECHHHe
Confidence            9999999999986421                             123                   8999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      +++|+++++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|
T Consensus       137 ~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g  215 (351)
T 1yb5_A          137 YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNG  215 (351)
T ss_dssp             EECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT
T ss_pred             EECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcC
Confidence            9999999999999999999999998877889999999999998 9999999999999999 9999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS  325 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~  325 (373)
                      ++++++.++   .++.+.+.+.+++ ++|++|||+|... ++.++++++++ |+++.+|.. .  ..+++...++. +++
T Consensus       216 a~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~-G~iv~~g~~-~--~~~~~~~~~~~~~~~  287 (351)
T 1yb5_A          216 AHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGSR-G--TIEINPRDTMAKESS  287 (351)
T ss_dssp             CSEEEETTS---TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCCC-S--CEEECTHHHHTTTCE
T ss_pred             CCEEEeCCC---chHHHHHHHHcCCCCcEEEEECCChHH-HHHHHHhccCC-CEEEEEecC-C--CCccCHHHHHhCCcE
Confidence            999999887   7888888888877 8999999999765 88999999997 999999963 2  34566666666 899


Q ss_pred             EEEeecCCCCchhHH----HHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          326 VCGTYFGGLKPRSDI----ATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       326 i~g~~~~~~~~~~~~----~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      +.|+.+.... .+++    +.+.+++++|++.+   +.|+++++.+|++.
T Consensus       288 i~g~~~~~~~-~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~~  336 (351)
T 1yb5_A          288 IIGVTLFSST-KEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHEN  336 (351)
T ss_dssp             EEECCGGGCC-HHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHHH
T ss_pred             EEEEEeecCC-HHHHHHHHHHHHHHHHCCCccCccceEEcHHHHHHHHHH
Confidence            9998654332 3344    44566788888876   78999999998875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=7.9e-47  Score=359.56  Aligned_cols=291  Identities=19%  Similarity=0.150  Sum_probs=246.3

Q ss_pred             ccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-----CCCCCCCCccccCcccEEEEE
Q 017335           13 VIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-----DLPKLPLPVIFGHEAVGVVES   85 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-----~~~~~~~p~~~G~e~~G~V~~   85 (373)
                      +++|||+++.+++.+  ++++++|.|+|++|||||||.++|||++|++.+.|..     ...  .+|.++|||++|+|++
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~--~~p~v~G~E~~G~V~~   81 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKN--NLPSGLGYDFSGEVIE   81 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTT--SCSBCCCCEEEEEEEE
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccC--CCCCcccceeEEEEEE
Confidence            468999999998876  9999999999999999999999999999999998832     122  6899999999999999


Q ss_pred             eCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335           86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        86 vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      +|++|++|++||||+..+...                          ..+|                   +|+||+.+|+
T Consensus        82 vG~~v~~~~~GdrV~~~~~~~--------------------------~~~G-------------------~~aey~~v~~  116 (321)
T 3tqh_A           82 LGSDVNNVNIGDKVMGIAGFP--------------------------DHPC-------------------CYAEYVCASP  116 (321)
T ss_dssp             ECTTCCSCCTTCEEEEECSTT--------------------------TCCC-------------------CSBSEEEECG
T ss_pred             eCCCCCCCCCCCEEEEccCCC--------------------------CCCC-------------------cceEEEEecH
Confidence            999999999999998764211                          1223                   9999999999


Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEEC-CChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G-~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +.++++|+++++++|++++++++|||+++ +..++++|++|||+| +|++|++++|+|+.+|+ +|++++ +++++++++
T Consensus       117 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~  193 (321)
T 3tqh_A          117 DTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLK  193 (321)
T ss_dssp             GGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHH
T ss_pred             HHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHH
Confidence            99999999999999999999999999987 889999999999998 59999999999999999 899998 566789999


Q ss_pred             HcCCceEEcCCCCCCcc-HHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-
Q 017335          245 KFGITDFINPATCGDKT-VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-  322 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~-~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-  322 (373)
                      ++|+++++|+++   .+ +.+.+     .++|+||||+|++. .+.++++++++ |+++.+|.....    .....+.. 
T Consensus       194 ~lGa~~~i~~~~---~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~----~~~~~~~~~  259 (321)
T 3tqh_A          194 ALGAEQCINYHE---EDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITAG----RVIEVAKQK  259 (321)
T ss_dssp             HHTCSEEEETTT---SCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTHH----HHHHHHHHT
T ss_pred             HcCCCEEEeCCC---cchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCch----hhhhhhhhc
Confidence            999999999887   55 54332     48999999999888 59999999997 999999864221    11122333 


Q ss_pred             CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          323 GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++++.+...  ....++++++++++++|++++   +.|+++++.+|+..+
T Consensus       260 ~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  307 (321)
T 3tqh_A          260 HRRAFGLLK--QFNIEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELL  307 (321)
T ss_dssp             TCEEECCCC--CCCHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHH
T ss_pred             ceEEEEEec--CCCHHHHHHHHHHHHCCCcccccccEEcHHHHHHHHHHH
Confidence            888888532  223688999999999999987   789999999988754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.1e-46  Score=364.53  Aligned_cols=304  Identities=16%  Similarity=0.164  Sum_probs=252.3

Q ss_pred             ccceeeEEeecCCCC---eEEEEEecCCCC--CCeEEEEEeeeeccccchhcccCCCCCCCCCCC---------ccccCc
Q 017335           13 VIRCKAAICRIPGKP---LVIEEIEVEPPK--AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLP---------VIFGHE   78 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~---l~~~~~~~p~~~--~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p---------~~~G~e   78 (373)
                      |++|||+++++++++   ++++++|.|+|+  ++||||||.++|||++|++.+.|.++... .+|         .++|||
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~P~~~~~~~p~~i~G~E   79 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP-AKTTGFGTTEPAAPCGNE   79 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCC-CCBSTTCCSSCBEECCSC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCC-CCCccccccCcccccCce
Confidence            578999999999874   899999999887  99999999999999999999998765321 466         899999


Q ss_pred             ccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 017335           79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT  158 (373)
Q Consensus        79 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  158 (373)
                      ++|+|+++|++|++|++||||++.+.                             .+                   |+|+
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------~~-------------------G~~a  111 (364)
T 1gu7_A           80 GLFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------NF-------------------GTWR  111 (364)
T ss_dssp             CEEEEEEECTTCCSCCTTCEEEESSS-----------------------------CC-------------------CCSB
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEecCC-----------------------------CC-------------------Ccch
Confidence            99999999999999999999986421                             12                   3999


Q ss_pred             eeEEeeccceEEcCC-----------CCChhhhhccchhhhhHHHHHHHHhCCCCC-CEEEEECC-ChHHHHHHHHHHHC
Q 017335          159 EYSVVDITHVVKITP-----------HIPLGIACLLSCGVSTGVGAAWKVAGVEVG-STVAIFGL-GAVGLAVAEGARLN  225 (373)
Q Consensus       159 ~~~~v~~~~~~~lP~-----------~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~-~~VlI~G~-G~vG~~a~~la~~~  225 (373)
                      ||+.+|++.++++|+           ++++++||+++++++|||+++.+..++++| ++|||+|+ |++|++++|+||.+
T Consensus       112 ey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~  191 (364)
T 1gu7_A          112 THALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL  191 (364)
T ss_dssp             SEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH
T ss_pred             heEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHC
Confidence            999999999999998           899999999999999999987766789999 99999998 99999999999999


Q ss_pred             CCCeEEEEcCChhH----HHHHHHcCCceEEcCCCCCCccHHHHHHHhc--CC-CccEEEECCCCHHHHHHHHHHhccCC
Q 017335          226 RASKIIGVDINPEK----FEIGKKFGITDFINPATCGDKTVSQVIKEMT--DG-GADYCFECIGLTSVMNDAFNSSREGW  298 (373)
Q Consensus       226 G~~~Vi~~~~~~~~----~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~~  298 (373)
                      |+ +|+++.++.++    .+.++++|+++++++++....++.+.+++.+  ++ ++|+||||+|+.. ...++++++++ 
T Consensus       192 Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~-  268 (364)
T 1gu7_A          192 NF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-  268 (364)
T ss_dssp             TC-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-
T ss_pred             CC-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccC-
Confidence            99 88888766554    6778899999999875200146778888887  45 8999999999887 44889999997 


Q ss_pred             ceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCC---C---chhHHHHHHHHHHcCCCCC---Ccccc---cCCCcc
Q 017335          299 GKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL---K---PRSDIATLAQKYLDKVHLR---SSFHL---CDPNSD  365 (373)
Q Consensus       299 G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~---~---~~~~~~~~~~~~~~g~i~~---~~~~~---~~~~~a  365 (373)
                      |+++.+|... ....+++...++. ++++.|+....+   .   ..++++++++++++|++++   ..+++   +++.+|
T Consensus       269 G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A  347 (364)
T 1gu7_A          269 GLMLTYGGMS-FQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHEL  347 (364)
T ss_dssp             CEEEECCCCS-SCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHH
T ss_pred             CEEEEecCCC-CCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHH
Confidence            9999999754 3345677777665 999999865331   1   1367899999999999986   44555   477777


Q ss_pred             cccc
Q 017335          366 SAGL  369 (373)
Q Consensus       366 ~~~~  369 (373)
                      ++.+
T Consensus       348 ~~~~  351 (364)
T 1gu7_A          348 YQDG  351 (364)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2e-47  Score=363.98  Aligned_cols=298  Identities=14%  Similarity=0.116  Sum_probs=252.6

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++++++++  ++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|  +++|
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~~G--v~~~   77 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIR-HFPMIPGIDFAGTVHASE--DPRF   77 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCC-SSSBCCCSEEEEEEEEES--STTC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCC-CCCccccceeEEEEEEeC--CCCC
Confidence            899999999875  89999999999999999999999999999999998776432 789999999999999999  5789


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||||++.+.                        ..|...+|                   +|+||+.+|++.++++|+
T Consensus        78 ~vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~iP~  114 (324)
T 3nx4_A           78 HAGQEVLLTGW------------------------GVGENHWG-------------------GLAERARVKGDWLVALPA  114 (324)
T ss_dssp             CTTCEEEEECT------------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCT
T ss_pred             CCCCEEEEccc------------------------ccCCCCCC-------------------ceeeEEecCHHHcEECCC
Confidence            99999997531                        13444455                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHH--HHhCCCCCC-EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~--~~~~~~~~~-~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      ++++++||++++.++|||.++.  ...++++++ +|||+|+ |++|++++|+||.+|+ +|+++++++++.++++++|++
T Consensus       115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~  193 (324)
T 3nx4_A          115 GLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGAN  193 (324)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCS
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCC
Confidence            9999999999999999998765  445577633 4999998 9999999999999999 999999999999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  328 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  328 (373)
                      +++|+++   .+.   +++++++++|++|||+|++ .++.++++++++ |+++.+|.... ...+++...++. ++++.|
T Consensus       194 ~vi~~~~---~~~---~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~g  264 (324)
T 3nx4_A          194 RILSRDE---FAE---SRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYG-GCVAACGLAGG-FALPTTVMPFILRNVRLQG  264 (324)
T ss_dssp             EEEEGGG---SSC---CCSSCCCCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTC-SEEEEESHHHHHHCCEEEE
T ss_pred             EEEecCC---HHH---HHhhcCCCccEEEECCCcH-HHHHHHHHHhcC-CEEEEEecCCC-CCCCCCHHHHhhcCeEEEE
Confidence            9999876   332   4455556899999999987 599999999997 99999998533 345666666665 999999


Q ss_pred             eecCCCCc---hhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          329 TYFGGLKP---RSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       329 ~~~~~~~~---~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      +.......   .+.++++++++++|++++  +.|+++++++|++.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~l~~~~~A~~~~  310 (324)
T 3nx4_A          265 VDSVMTPPARRAEAWARLVKDLPESFYAQAATEITLADAPKFADAI  310 (324)
T ss_dssp             CCSTTCCHHHHHHHHHHHHHHSCHHHHHHHEEEEEGGGHHHHHHHH
T ss_pred             EeccccChHHHHHHHHHHHHHHHcCCCCCCceeEeHHHHHHHHHHH
Confidence            86554432   256888999999998865  889999999988654

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=5.1e-46  Score=355.67  Aligned_cols=299  Identities=21%  Similarity=0.262  Sum_probs=253.0

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      |||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++.+.|.+ +.....+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999987753  8999999999999999999999999999999998865 2100158999999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      |++||||+..+.                             .+|                   +|+||+.+|++.++++|
T Consensus        82 ~~~GdrV~~~~~-----------------------------~~G-------------------~~aey~~v~~~~~~~iP  113 (333)
T 1wly_A           82 FTVGERVCTCLP-----------------------------PLG-------------------AYSQERLYPAEKLIKVP  113 (333)
T ss_dssp             CCTTCEEEECSS-----------------------------SCC-------------------CSBSEEEEEGGGCEECC
T ss_pred             CCCCCEEEEecC-----------------------------CCC-------------------cceeEEEecHHHcEeCC
Confidence            999999975321                             123                   89999999999999999


Q ss_pred             CCCChhh--hhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          173 PHIPLGI--ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       173 ~~l~~~~--aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      +++++++  |++++++++|||+++.+..+++++++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++
T Consensus       114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~  192 (333)
T 1wly_A          114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH  192 (333)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence            9999999  99999999999998877889999999999997 9999999999999999 999999999999999999999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH-HHhh-C--c
Q 017335          250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILK-G--R  324 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~--~  324 (373)
                      ++++.++   .++.+.+.+.+.+ ++|++|||+|... ++.++++++++ |+++.+|.... ...+++.. .++. +  +
T Consensus       193 ~~~d~~~---~~~~~~i~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~  266 (333)
T 1wly_A          193 HTINYST---QDFAEVVREITGGKGVDVVYDSIGKDT-LQKSLDCLRPR-GMCAAYGHASG-VADPIRVVEDLGVRGSLF  266 (333)
T ss_dssp             EEEETTT---SCHHHHHHHHHTTCCEEEEEECSCTTT-HHHHHHTEEEE-EEEEECCCTTC-CCCCCCHHHHTTTTTSCE
T ss_pred             EEEECCC---HHHHHHHHHHhCCCCCeEEEECCcHHH-HHHHHHhhccC-CEEEEEecCCC-CcCCCChhHhhhhcCCcE
Confidence            9998887   7888888888766 8999999999844 89999999997 99999997542 23456665 5555 7  8


Q ss_pred             EEEEeecCCCCc----hhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLKP----RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~~----~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++.|+.......    .++++++++++++|++++   +.|+++++.+|++.+
T Consensus       267 ~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  318 (333)
T 1wly_A          267 ITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYM  318 (333)
T ss_dssp             EECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHH
T ss_pred             EEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHH
Confidence            998875421111    246899999999999986   789999999887643

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4.1e-45  Score=353.41  Aligned_cols=299  Identities=17%  Similarity=0.186  Sum_probs=252.9

Q ss_pred             CcccceeeEEeecCCC----CeEE-EEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEE
Q 017335           11 GKVIRCKAAICRIPGK----PLVI-EEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES   85 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~----~l~~-~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~   85 (373)
                      .++.+|||+++.+++.    .+++ +++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|++
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~P~i~G~E~~G~V~~   97 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSV-KPPFDIGFEGIGEVVA   97 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTC-CSCEECCSEEEEEEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCC-CCCCCCCceeEEEEEE
Confidence            3678899999999874    3889 99999999999999999999999999999988764321 6899999999999999


Q ss_pred             eCCCCC-ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee
Q 017335           86 VGEYVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD  164 (373)
Q Consensus        86 vG~~v~-~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  164 (373)
                      +|++|+ +|++||||+...                               +                   |+|+||+.+|
T Consensus        98 vG~~V~~~~~vGdrV~~~~-------------------------------~-------------------G~~aey~~v~  127 (362)
T 2c0c_A           98 LGLSASARYTVGQAVAYMA-------------------------------P-------------------GSFAEYTVVP  127 (362)
T ss_dssp             ECTTGGGTCCTTCEEEEEC-------------------------------S-------------------CCSBSEEEEE
T ss_pred             ECCCccCCCCCCCEEEEcc-------------------------------C-------------------CcceeEEEEc
Confidence            999999 999999998642                               1                   3899999999


Q ss_pred             ccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       165 ~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      ++.++++|+. + .++++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.+
T Consensus       128 ~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~  204 (362)
T 2c0c_A          128 ASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFL  204 (362)
T ss_dssp             GGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             HHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHH
Confidence            9999999996 3 4667778899999998888889999999999996 9999999999999999 999999999999999


Q ss_pred             HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc------c---c
Q 017335          244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP------I---S  314 (373)
Q Consensus       244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~------~---~  314 (373)
                      +++|+++++++++   .++.+.+++.+++++|+||||+|... ++.++++++++ |+++.+|.......      +   +
T Consensus       205 ~~~Ga~~~~~~~~---~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~  279 (362)
T 2c0c_A          205 KSLGCDRPINYKT---EPVGTVLKQEYPEGVDVVYESVGGAM-FDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGT  279 (362)
T ss_dssp             HHTTCSEEEETTT---SCHHHHHHHHCTTCEEEEEECSCTHH-HHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTT
T ss_pred             HHcCCcEEEecCC---hhHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccc
Confidence            9999999999887   78888888877558999999999854 99999999997 99999997432110      0   2


Q ss_pred             cCHHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCCC-----------cccccCCCcccccc
Q 017335          315 LNSIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLRS-----------SFHLCDPNSDSAGL  369 (373)
Q Consensus       315 ~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~-----------~~~~~~~~~a~~~~  369 (373)
                      ++ ..++. ++++.|+....+.  ..++++++++++++|++++.           .|+++++.+|++.+
T Consensus       280 ~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~  347 (362)
T 2c0c_A          280 LP-AKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYM  347 (362)
T ss_dssp             HH-HHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHH
T ss_pred             cH-HHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHH
Confidence            22 34444 9999998755432  24679999999999999752           35888888887643

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-45  Score=350.08  Aligned_cols=297  Identities=20%  Similarity=0.184  Sum_probs=252.6

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++.+.|.++..  .+|.++|||++|+|+++|++|++|
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~   79 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLPSGLGTEAAGIVSKVGSGVKHI   79 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCSCEEEEEEEECTTCCSC
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCCCCceeEEEEEEECCCCCCC
Confidence            899999987653  8999999999999999999999999999999998876543  689999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||||. .+.                            ..+|                   +|+||+.+|++.++++|+
T Consensus        80 ~~GdrV~-~~g----------------------------~~~G-------------------~~aey~~v~~~~~~~iP~  111 (327)
T 1qor_A           80 KAGDRVV-YAQ----------------------------SALG-------------------AYSSVHNIIADKAAILPA  111 (327)
T ss_dssp             CTTCEEE-ESC----------------------------CSSC-------------------CSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEE-ECC----------------------------CCCc-------------------eeeeEEEecHHHcEECCC
Confidence            9999994 210                            0123                   899999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  252 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi  252 (373)
                      ++++++|++++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|+++++
T Consensus       112 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~  190 (327)
T 1qor_A          112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVI  190 (327)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred             CCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            99999999999999999998877889999999999996 9999999999999999 999999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-h-CcEEEEe
Q 017335          253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-K-GRSVCGT  329 (373)
Q Consensus       253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~-~~~i~g~  329 (373)
                      +..+   .++.+.+.+.+.+ ++|++|||+| ...++.++++++++ |+++.+|.... ...+++...++ + ++++.+.
T Consensus       191 ~~~~---~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  264 (327)
T 1qor_A          191 NYRE---EDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSG-AVTGVNLGILNQKGSLYVTRP  264 (327)
T ss_dssp             ETTT---SCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTC-CCCCBCTHHHHHTTSCEEECC
T ss_pred             ECCC---ccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCC-CCCccCHHHHhhccceEEEcc
Confidence            9877   7888888888876 8999999999 45599999999997 99999997533 22345555444 3 5777754


Q ss_pred             ecCCCC-----chhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335          330 YFGGLK-----PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL  369 (373)
Q Consensus       330 ~~~~~~-----~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~  369 (373)
                      ..+.+.     ..+.++++++++++|++++     +.|+++++.+|++.+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~  314 (327)
T 1qor_A          265 SLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEIL  314 (327)
T ss_dssp             CHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHHHHH
T ss_pred             chhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHHHHH
Confidence            332111     1456899999999999975     478999999887654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.8e-46  Score=358.27  Aligned_cols=304  Identities=16%  Similarity=0.174  Sum_probs=247.2

Q ss_pred             cccceeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           12 KVIRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      |+.+|||+++++++.  .++++++|.|+|+++||||||.++|||++|++.+.|..+... .+|.++|||++|+|+++|  
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~E~~G~V~~~~--   77 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR-EYPLILGIDAAGTVVSSN--   77 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCS-SCSEECCSEEEEEEEECS--
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcC-CCCccccceEEEEEEEcC--
Confidence            567899999998862  389999999999999999999999999999999988654322 689999999999999974  


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  169 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  169 (373)
                      +++|++||||++.+.                        ..|...+|                   +|+||+.+|++.++
T Consensus        78 v~~~~vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~  114 (330)
T 1tt7_A           78 DPRFAEGDEVIATSY------------------------ELGVSRDG-------------------GLSEYASVPGDWLV  114 (330)
T ss_dssp             STTCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSSEEECGGGEE
T ss_pred             CCCCCCCCEEEEccc------------------------ccCCCCCc-------------------cceeEEEecHHHeE
Confidence            678999999987532                        12333345                   99999999999999


Q ss_pred             EcCCCCChhhhhccchhhhhHHHHHH--HHhCCCCCC-EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          170 KITPHIPLGIACLLSCGVSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       170 ~lP~~l~~~~aa~l~~~~~ta~~~~~--~~~~~~~~~-~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      ++|+++++++|+++++...|||.++.  +..++++++ +|||+|+ |++|++++|+|+.+|+ +|+++++++++++++++
T Consensus       115 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~  193 (330)
T 1tt7_A          115 PLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQ  193 (330)
T ss_dssp             ECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHH
T ss_pred             ECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            99999999999999999999998764  446789996 9999998 9999999999999999 89999999999999999


Q ss_pred             cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      +|+++++|+++   .+ .+.+++.+++++|+||||+|++ .++.++++++++ |+++.+|... +...+++...++. ++
T Consensus       194 lGa~~v~~~~~---~~-~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~  266 (330)
T 1tt7_A          194 LGASEVISRED---VY-DGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYG-GSVAVSGLTG-GGEVPATVYPFILRGV  266 (330)
T ss_dssp             HTCSEEEEHHH---HC-SSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEE-EEEEECCCSS-CSCEEECSHHHHTSCC
T ss_pred             cCCcEEEECCC---ch-HHHHHHhhcCCccEEEECCcHH-HHHHHHHhhcCC-CEEEEEecCC-CCccCcchHHHHhcCe
Confidence            99999997653   21 1112333444899999999986 499999999997 9999999853 3345566656555 99


Q ss_pred             EEEEeecCCCC---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          325 SVCGTYFGGLK---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       325 ~i~g~~~~~~~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++.|+......   ..+.++++++++++|++++   +.|+++++.+|++.+
T Consensus       267 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~~~l~~~~~A~~~~  317 (330)
T 1tt7_A          267 SLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDREVSLEETPGALKDI  317 (330)
T ss_dssp             EEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEEECSTTHHHHHHHT
T ss_pred             EEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceEEcHHHHHHHHHHH
Confidence            99998533222   1245667777888888865   789999999988654

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.8e-44  Score=345.30  Aligned_cols=293  Identities=17%  Similarity=0.122  Sum_probs=250.0

Q ss_pred             cceeeEEeec--C----CCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCc----ccEEE
Q 017335           14 IRCKAAICRI--P----GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHE----AVGVV   83 (373)
Q Consensus        14 ~~~ka~~~~~--~----~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e----~~G~V   83 (373)
                      ++|||++++.  +    .+.++++++|.|+|++|||||||.+++||++|...+.+....   .+|.++|||    ++|+|
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~---~~p~~~G~e~g~~~~G~V   82 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY---IPPVGIGEVMRALGVGKV   82 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS---SCCCCTTSBCCCEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc---CCCCCCCcccCCceEEEE
Confidence            6799999985  1    123999999999999999999999999999999888764332   456777777    79999


Q ss_pred             EEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEe
Q 017335           84 ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV  163 (373)
Q Consensus        84 ~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v  163 (373)
                      ++.  ++++|++||||+..                                                    |+|+||+.+
T Consensus        83 ~~~--~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v  108 (336)
T 4b7c_A           83 LVS--KHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIG  108 (336)
T ss_dssp             EEE--CSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEE
T ss_pred             Eec--CCCCCCCCCEEecc----------------------------------------------------CCceEEEEe
Confidence            995  48899999999853                                                    389999999


Q ss_pred             eccceEEcCCCCChhhh--hccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017335          164 DITHVVKITPHIPLGIA--CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF  240 (373)
Q Consensus       164 ~~~~~~~lP~~l~~~~a--a~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~  240 (373)
                      |++.++++|+++++.++  ++++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.
T Consensus       109 ~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~  187 (336)
T 4b7c_A          109 EPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKC  187 (336)
T ss_dssp             CCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred             chHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence            99999999999987776  7788999999998889999999999999998 9999999999999999 999999999999


Q ss_pred             HHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC-----CCccc
Q 017335          241 EIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH-----GSPIS  314 (373)
Q Consensus       241 ~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-----~~~~~  314 (373)
                      +.+ +++|+++++|+++   .++.+.+.+.+++++|++|||+|... +..++++++++ |+++.+|....     ....+
T Consensus       188 ~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~  262 (336)
T 4b7c_A          188 RFLVEELGFDGAIDYKN---EDLAAGLKRECPKGIDVFFDNVGGEI-LDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGP  262 (336)
T ss_dssp             HHHHHTTCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCGGGGC------CC
T ss_pred             HHHHHHcCCCEEEECCC---HHHHHHHHHhcCCCceEEEECCCcch-HHHHHHHHhhC-CEEEEEeecccccCCcccccc
Confidence            999 8999999999987   88999999988669999999999754 99999999997 99999997541     11235


Q ss_pred             cCHHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          315 LNSIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       315 ~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ++...++. ++++.|+..+.+.  ..++++++++++++|++++   ..|+++++.+|++.+
T Consensus       263 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~  323 (336)
T 4b7c_A          263 ANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKL  323 (336)
T ss_dssp             TTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHH
T ss_pred             hhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHH
Confidence            56556666 9999999765532  1377999999999999987   457899998887653

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.3e-45  Score=350.32  Aligned_cols=301  Identities=14%  Similarity=0.132  Sum_probs=241.4

Q ss_pred             cceeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           14 IRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        14 ~~~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      .+|||+++++++.  .++++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++  +++
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVK-TYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCC-SSSBCCCSEEEEEEEEC--CSS
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCC-CCCcccCcceEEEEEec--CCC
Confidence            4699999999873  388999999999999999999999999999999988654321 68999999999999996  467


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      +|++||||++...                        ..|...+|                   +|+||+.+|++.++++
T Consensus        79 ~~~vGdrV~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~~~~~  115 (328)
T 1xa0_A           79 RFREGDEVIATGY------------------------EIGVTHFG-------------------GYSEYARLHGEWLVPL  115 (328)
T ss_dssp             SCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSEEEECGGGCEEC
T ss_pred             CCCCCCEEEEccc------------------------cCCCCCCc-------------------cceeEEEechHHeEEC
Confidence            8999999987531                        12333345                   9999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHH--HHhCCCCCC-EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~--~~~~~~~~~-~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      |+++++++|+++++.+.|||.++.  +..++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus       116 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG  194 (328)
T 1xa0_A          116 PKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLG  194 (328)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTT
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcC
Confidence            999999999999999999998764  446789996 9999998 9999999999999999 8999999999999999999


Q ss_pred             CceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE
Q 017335          248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV  326 (373)
Q Consensus       248 a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i  326 (373)
                      +++++|+++   .+ .+.+++.+++++|+||||+|... ++.++++++++ |+++.+|... +...+++...++. ++++
T Consensus       195 a~~~i~~~~---~~-~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~G~~~-~~~~~~~~~~~~~~~~~i  267 (328)
T 1xa0_A          195 AKEVLARED---VM-AERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSL  267 (328)
T ss_dssp             CSEEEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEE
T ss_pred             CcEEEecCC---cH-HHHHHHhcCCcccEEEECCcHHH-HHHHHHhhccC-CEEEEEeecC-CCCCCCchhhhhhcCceE
Confidence            999998875   32 33445555558999999999864 99999999997 9999999753 3344566556555 9999


Q ss_pred             EEeecCCCCc---hhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335          327 CGTYFGGLKP---RSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL  369 (373)
Q Consensus       327 ~g~~~~~~~~---~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~  369 (373)
                      .|+.......   .+.++++++++++| +.+  +.|+++++++|++.+
T Consensus       268 ~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~~~~~~l~~~~~A~~~~  314 (328)
T 1xa0_A          268 LGIDSVYCPMDLRLRIWERLAGDLKPD-LERIAQEISLAELPQALKRI  314 (328)
T ss_dssp             EECCSSSCCHHHHHHHHHHHHTTTCCC-HHHHEEEEEGGGHHHHHHHH
T ss_pred             EEEecccCCHHHHHHHHHHHHHHHHcC-CceeeeEeCHHHHHHHHHHH
Confidence            9984322221   23456667777667 543  889999999987654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=5.8e-44  Score=346.90  Aligned_cols=303  Identities=19%  Similarity=0.202  Sum_probs=245.8

Q ss_pred             CcccceeeEEeecCCCC--eEE-EEEecCCC-CCCeEEEEEeeeeccccchhcccCCCC-------------CCCCCCCc
Q 017335           11 GKVIRCKAAICRIPGKP--LVI-EEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTD-------------LPKLPLPV   73 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~--l~~-~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~-------------~~~~~~p~   73 (373)
                      .++++|||+++.+++.+  +++ +++|.|+| +++||||||.++|||++|++.+.|..+             .....+|.
T Consensus        17 ~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             -CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             ccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            46788999999998753  888 99999985 999999999999999999999887531             11014899


Q ss_pred             cccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccc
Q 017335           74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN  153 (373)
Q Consensus        74 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~  153 (373)
                      ++|||++|+|+++|++|++|++||||+..+.                           ...+|                 
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~---------------------------~~~~G-----------------  132 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVP---------------------------PWKQG-----------------  132 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECC---------------------------TTSCC-----------------
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecC---------------------------CCCCc-----------------
Confidence            9999999999999999999999999987532                           11234                 


Q ss_pred             ccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhC----CCCCCEEEEECC-ChHHHHHHHHHHHCCCC
Q 017335          154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG----VEVGSTVAIFGL-GAVGLAVAEGARLNRAS  228 (373)
Q Consensus       154 ~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~----~~~~~~VlI~G~-G~vG~~a~~la~~~G~~  228 (373)
                        +|+||+.+|++.++++|+++++++||+++++++|||+++.+..+    +++|++|||+|+ |++|++++|+|+.+|+ 
T Consensus       133 --~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-  209 (375)
T 2vn8_A          133 --TLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-  209 (375)
T ss_dssp             --SSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-
T ss_pred             --cceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-
Confidence              99999999999999999999999999999999999998777788    999999999996 9999999999999999 


Q ss_pred             eEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH-HHHHHHHHHhccCCceEEEEccc
Q 017335          229 KIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       229 ~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +|++++ +++++++++++|+++++|+++   .++.+.+.+.  +++|+||||+|.. ..++.++++++++ |+++.+|..
T Consensus       210 ~Vi~~~-~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~  282 (375)
T 2vn8_A          210 HVTAVC-SQDASELVRKLGADDVIDYKS---GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTP  282 (375)
T ss_dssp             EEEEEE-CGGGHHHHHHTTCSEEEETTS---SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCS
T ss_pred             EEEEEe-ChHHHHHHHHcCCCEEEECCc---hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCC
Confidence            899998 678899999999999999887   7787777653  4899999999988 4568899999997 999999863


Q ss_pred             CCCCc----cccCH----HHHh--------hCcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335          308 MHGSP----ISLNS----IEIL--------KGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       308 ~~~~~----~~~~~----~~~~--------~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      .....    ++.+.    ..++        .+..+.+...  ....++++++++++++|++++   +.|+++++++|++.
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~  360 (375)
T 2vn8_A          283 FLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLK  360 (375)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHH
T ss_pred             cccccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHH
Confidence            21100    00100    0111        2334443321  123577899999999999986   67999999998865


Q ss_pred             c
Q 017335          369 L  369 (373)
Q Consensus       369 ~  369 (373)
                      +
T Consensus       361 ~  361 (375)
T 2vn8_A          361 V  361 (375)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=3.2e-43  Score=339.38  Aligned_cols=300  Identities=14%  Similarity=0.174  Sum_probs=249.0

Q ss_pred             CCcccceeeEEe-ecC---CC----CeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccC----CCCCCCCCCCcccc
Q 017335           10 AGKVIRCKAAIC-RIP---GK----PLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKS----STDLPKLPLPVIFG   76 (373)
Q Consensus        10 ~~~~~~~ka~~~-~~~---~~----~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g----~~~~~~~~~p~~~G   76 (373)
                      ..+|++|||+++ ..+   |.    .++++++|.|+| +++||||||.++|||++|++.+.+    .+... ..+|.++|
T Consensus         3 ~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~-~~~p~v~G   81 (357)
T 2zb4_A            3 AAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITP-WQLSQVVD   81 (357)
T ss_dssp             ---CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCC-CCBTSBCE
T ss_pred             CcccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCC-CCCCcccc
Confidence            357889999999 555   32    399999999999 999999999999999999987765    22211 15789999


Q ss_pred             CcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccc
Q 017335           77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS  156 (373)
Q Consensus        77 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~  156 (373)
                      ||++|+|++  ++|++|++||||++..                                                   |+
T Consensus        82 ~E~~G~V~~--~~v~~~~vGdrV~~~~---------------------------------------------------G~  108 (357)
T 2zb4_A           82 GGGIGIIEE--SKHTNLTKGDFVTSFY---------------------------------------------------WP  108 (357)
T ss_dssp             EEEEEEEEE--ECSTTCCTTCEEEEEE---------------------------------------------------EE
T ss_pred             ccEEEEEEe--cCCCCCCCCCEEEecC---------------------------------------------------CC
Confidence            999999999  8899999999998642                                                   38


Q ss_pred             eeeeEEeeccceEEcCCCC-----ChhhhhccchhhhhHHHHHHHHhCCCCC--CEEEEECC-ChHHHHHHHHHHHCCCC
Q 017335          157 FTEYSVVDITHVVKITPHI-----PLGIACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRAS  228 (373)
Q Consensus       157 ~a~~~~v~~~~~~~lP~~l-----~~~~aa~l~~~~~ta~~~~~~~~~~~~~--~~VlI~G~-G~vG~~a~~la~~~G~~  228 (373)
                      |+||+++|++.++++|+++     +++ +++++++++|||+++.+..++++|  ++|||+|+ |++|++++|+++..|++
T Consensus       109 ~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~  187 (357)
T 2zb4_A          109 WQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCS  187 (357)
T ss_dssp             SBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCS
T ss_pred             cEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCC
Confidence            9999999999999999999     555 677888999999988788999999  99999998 99999999999999987


Q ss_pred             eEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          229 KIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       229 ~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +|+++++++++.+.+++ +|+++++|.++   .++.+.+.+.+++++|++|||+|. ..++.++++++++ |+++.+|..
T Consensus       188 ~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~  262 (357)
T 2zb4_A          188 RVVGICGTHEKCILLTSELGFDAAINYKK---DNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQI  262 (357)
T ss_dssp             EEEEEESCHHHHHHHHHTSCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCG
T ss_pred             eEEEEeCCHHHHHHHHHHcCCceEEecCc---hHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCc
Confidence            89999999999999987 99999999887   788888888876689999999997 4499999999997 999999975


Q ss_pred             CCC-CccccC-------HHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          308 MHG-SPISLN-------SIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       308 ~~~-~~~~~~-------~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      ... ..++++       ...++. ++++.|+....+.  ..++++++++++++|++++   ..|+++++++|++.+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~  338 (357)
T 2zb4_A          263 SQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSM  338 (357)
T ss_dssp             GGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHH
T ss_pred             cccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHH
Confidence            321 123322       134444 9999998654321  2467999999999999987   458899998887643

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=6.8e-44  Score=346.87  Aligned_cols=298  Identities=15%  Similarity=0.162  Sum_probs=240.8

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-------------------------
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------------------------   66 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-------------------------   66 (373)
                      .+.+|||++.......++++++|.|+|+++||||||.+++||++|++.+.|.++.                         
T Consensus         4 ~~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~   83 (379)
T 3iup_A            4 SALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS   83 (379)
T ss_dssp             EEEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred             chhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence            3578999988654445999999999999999999999999999999998875210                         


Q ss_pred             --CCCCCCccccCcccEEEEEeCCCC-CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCcccccc
Q 017335           67 --PKLPLPVIFGHEAVGVVESVGEYV-EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL  143 (373)
Q Consensus        67 --~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~  143 (373)
                        ....+|.++|||++|+|+++|++| ++|++||||++.+.                                       
T Consensus        84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~---------------------------------------  124 (379)
T 3iup_A           84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG---------------------------------------  124 (379)
T ss_dssp             HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCS---------------------------------------
T ss_pred             cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCC---------------------------------------
Confidence              011578999999999999999999 88999999986431                                       


Q ss_pred             CCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE--CCChHHHHHHHH
Q 017335          144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF--GLGAVGLAVAEG  221 (373)
Q Consensus       144 ~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~--G~G~vG~~a~~l  221 (373)
                                 |+|+||+++|++.++++|+++++++|+++++..+|||++ ++... ++|++|||+  |+|++|++++|+
T Consensus       125 -----------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g~~vlV~gag~G~vG~~a~q~  191 (379)
T 3iup_A          125 -----------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGM-VETMR-LEGHSALVHTAAASNLGQMLNQI  191 (379)
T ss_dssp             -----------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHH-HHHHH-HTTCSCEEESSTTSHHHHHHHHH
T ss_pred             -----------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH-HHHhc-cCCCEEEEECCCCCHHHHHHHHH
Confidence                       389999999999999999999999999999999999975 45555 899999999  459999999999


Q ss_pred             HHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhc-----
Q 017335          222 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR-----  295 (373)
Q Consensus       222 a~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~-----  295 (373)
                      ||.+|+ +|++++++++++++++++|+++++|+++   .++.+.+++.+++ ++|+||||+|++..++.++++++     
T Consensus       192 a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r  267 (379)
T 3iup_A          192 CLKDGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNK  267 (379)
T ss_dssp             HHHHTC-CEEEEESSHHHHHHHHHTTCSCEEETTS---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHT
T ss_pred             HHHCCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhc
Confidence            999999 8999999999999999999999999988   8899999999988 99999999998776788888885     


Q ss_pred             cCCceEEEEcccC----------CCCccccCHHHHhh-CcEEEEeecCCCC---ch----hHHHHHHHHHHcCCCCC---
Q 017335          296 EGWGKTVILGVEM----------HGSPISLNSIEILK-GRSVCGTYFGGLK---PR----SDIATLAQKYLDKVHLR---  354 (373)
Q Consensus       296 ~~~G~~v~~G~~~----------~~~~~~~~~~~~~~-~~~i~g~~~~~~~---~~----~~~~~~~~~~~~g~i~~---  354 (373)
                      ++ |+++.+|...          +....+++  .++. ++++.|+.++.+.   ..    +.++++++++.+ ++.+   
T Consensus       268 ~~-G~~~~~G~~~~g~iv~~G~~~~~~~~~~--~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~  343 (379)
T 3iup_A          268 SA-REYSRYGSTTHKQVYLYGGLDTSPTEFN--RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYS  343 (379)
T ss_dssp             TC-CSCCTTCCCSCEEEEECCCSEEEEEEEC--CCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCS
T ss_pred             cc-cceeecccccCceEEEecCCCCCccccc--cccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcce
Confidence            43 5544444322          11222332  3334 8999998655431   12    334666677776 4654   


Q ss_pred             CcccccCC--Ccccccc
Q 017335          355 SSFHLCDP--NSDSAGL  369 (373)
Q Consensus       355 ~~~~~~~~--~~a~~~~  369 (373)
                      +.|+++++  ++|++.+
T Consensus       344 ~~~~l~~~~~~~A~~~l  360 (379)
T 3iup_A          344 KEISLAEVLDLDMIAVY  360 (379)
T ss_dssp             EEEEHHHHTCHHHHHHH
T ss_pred             EEecHHHhhhHHHHHHH
Confidence            78999999  8887643

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=8.3e-42  Score=322.12  Aligned_cols=280  Identities=18%  Similarity=0.226  Sum_probs=232.5

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.+++.+..++++|.|+|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+           
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~e~~G~V~-----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRL-HPPFIPGMEVVGVVE-----------   68 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCCEEEEEET-----------
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCCcccceEEEEEE-----------
Confidence            79999999987555778999999999999999999999999999998665422 689999999999998           


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||||+....                              +                   |+|+||+.+|++.++++|+++
T Consensus        69 GdrV~~~~~------------------------------~-------------------G~~aey~~v~~~~~~~iP~~~   99 (302)
T 1iz0_A           69 GRRYAALVP------------------------------Q-------------------GGLAERVAVPKGALLPLPEGL   99 (302)
T ss_dssp             TEEEEEECS------------------------------S-------------------CCSBSEEEEEGGGCEECCTTC
T ss_pred             CcEEEEecC------------------------------C-------------------cceeeEEEEcHHHcEeCCCCC
Confidence            999986421                              2                   389999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      ++++||+++++++|||+++.+.. +++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus       100 ~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~  177 (302)
T 1iz0_A          100 SPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY  177 (302)
T ss_dssp             CHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEEC
Confidence            99999999999999999887677 999999999998 9999999999999999 99999999999999999999999876


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      ++  ..++.+.+     +++|+||| +|.. .++.++++++++ |+++.+|.... ...+++...++. ++++.|+.++.
T Consensus       178 ~~--~~~~~~~~-----~~~d~vid-~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~  246 (302)
T 1iz0_A          178 AE--VPERAKAW-----GGLDLVLE-VRGK-EVEESLGLLAHG-GRLVYIGAAEG-EVAPIPPLRLMRRNLAVLGFWLTP  246 (302)
T ss_dssp             GG--HHHHHHHT-----TSEEEEEE-CSCT-THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHH
T ss_pred             Cc--chhHHHHh-----cCceEEEE-CCHH-HHHHHHHhhccC-CEEEEEeCCCC-CCCCcCHHHHHhCCCeEEEEeccc
Confidence            42  02343333     58999999 9985 499999999997 99999997543 222455555555 99999986542


Q ss_pred             C-CchhHHHHHHH---HHHcCCCCC---CcccccCCCcccccc
Q 017335          334 L-KPRSDIATLAQ---KYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       334 ~-~~~~~~~~~~~---~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      + ...++++++++   ++++|++++   +.|+++++++|+..+
T Consensus       247 ~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  289 (302)
T 1iz0_A          247 LLREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRAL  289 (302)
T ss_dssp             HTTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHHT
T ss_pred             hhhhHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHHHH
Confidence            1 12578999999   999999986   789999999887654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.5e-39  Score=310.85  Aligned_cols=292  Identities=18%  Similarity=0.177  Sum_probs=239.6

Q ss_pred             ccceeeEEeecC--C----CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEe
Q 017335           13 VIRCKAAICRIP--G----KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV   86 (373)
Q Consensus        13 ~~~~ka~~~~~~--~----~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v   86 (373)
                      +++|||+++.+.  +    +.++++++|.|+|++|||||||.++|||+.|.. +..  + .  .+|.++|||.+|+|++.
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~--~-~--~~p~~~g~e~~G~Vv~~   78 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-ASK--R-L--KEGAVMMGQQVARVVES   78 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HTT--T-C--CTTSBCCCCEEEEEEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-ccC--c-C--CCCcccccceEEEEEec
Confidence            567999999874  3    238999999999999999999999999998873 211  1 1  57789999999999995


Q ss_pred             CCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc
Q 017335           87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT  166 (373)
Q Consensus        87 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~  166 (373)
                        ++++|++||||++.                                                    |+|+||+.+|++
T Consensus        79 --~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~  104 (333)
T 1v3u_A           79 --KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGK  104 (333)
T ss_dssp             --SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESST
T ss_pred             --CCCCCCCCCEEEec----------------------------------------------------CceEEEEEechH
Confidence              57889999999752                                                    289999999999


Q ss_pred             ceEEcCCC----CChhh-hhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017335          167 HVVKITPH----IPLGI-ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF  240 (373)
Q Consensus       167 ~~~~lP~~----l~~~~-aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~  240 (373)
                      .++++|++    +++++ +++++++++|||+++.+..++++|++|||+|+ |++|++++++++..|+ +|+++++++++.
T Consensus       105 ~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~  183 (333)
T 1v3u_A          105 GLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKI  183 (333)
T ss_dssp             TEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred             HeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence            99999997    88887 47888899999998878889999999999998 9999999999999999 999999999999


Q ss_pred             HHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCC----cc-cc
Q 017335          241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS----PI-SL  315 (373)
Q Consensus       241 ~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~----~~-~~  315 (373)
                      +.++++|+++++|..+  ..++.+.+.+.+++++|++||+.|... +..++++++++ |+++.+|......    .. ..
T Consensus       184 ~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~  259 (333)
T 1v3u_A          184 AYLKQIGFDAAFNYKT--VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGP  259 (333)
T ss_dssp             HHHHHTTCSEEEETTS--CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCCC-------CCBCC
T ss_pred             HHHHhcCCcEEEecCC--HHHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcC-CEEEEEeccccccCCCCCCCCc
Confidence            9999999999988754  146777888777668999999999765 89999999997 9999999753311    11 13


Q ss_pred             CHHHHhh-CcEEEEeecCCCC---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          316 NSIEILK-GRSVCGTYFGGLK---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       316 ~~~~~~~-~~~i~g~~~~~~~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      +...++. ++++.|+..+.+.   ..++++++++++++|++++   ..++++++++|++.+
T Consensus       260 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~  320 (333)
T 1v3u_A          260 SPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEM  320 (333)
T ss_dssp             CHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHH
T ss_pred             CHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHH
Confidence            5555555 8999998765432   1467889999999999987   457888888887643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=5.6e-40  Score=315.16  Aligned_cols=299  Identities=19%  Similarity=0.184  Sum_probs=238.5

Q ss_pred             cccceeeEEeec-----CCC-CeEEE--EEecCC-CCCCeEEEEEeeeeccccchhcccCCCCCCC--CCCCccccCccc
Q 017335           12 KVIRCKAAICRI-----PGK-PLVIE--EIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAV   80 (373)
Q Consensus        12 ~~~~~ka~~~~~-----~~~-~l~~~--~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~   80 (373)
                      ||.+||++++..     ++. .++++  +++.|. |++|||||||.++|+|+.|. .+.|......  ..+|.++|||.+
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            455677766654     442 38888  888887 89999999999999888774 4445432110  146889999999


Q ss_pred             EEEEE--eCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 017335           81 GVVES--VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT  158 (373)
Q Consensus        81 G~V~~--vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a  158 (373)
                      |+|++  +|+++++|++||||+..                                                    |+|+
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~a  107 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWE  107 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE----------------------------------------------------EESB
T ss_pred             cceEEEEEecCCCCCCCCCEEEee----------------------------------------------------cCce
Confidence            99999  99999999999999753                                                    3899


Q ss_pred             eeEEeeccc--eEEcCC---CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEE
Q 017335          159 EYSVVDITH--VVKITP---HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIG  232 (373)
Q Consensus       159 ~~~~v~~~~--~~~lP~---~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~  232 (373)
                      ||+.++++.  ++++|+   .++++ +++++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|++
T Consensus       108 ey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~  185 (345)
T 2j3h_A          108 EYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVG  185 (345)
T ss_dssp             SEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred             eEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEE
Confidence            999998876  999996   35555 67788899999998878889999999999998 9999999999999999 9999


Q ss_pred             EcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC-
Q 017335          233 VDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-  310 (373)
Q Consensus       233 ~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~-  310 (373)
                      +++++++++.++ ++|+++++|..+  ..++.+.+.+.+++++|++||++|.. .++.++++++++ |+++.+|..... 
T Consensus       186 ~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~  261 (345)
T 2j3h_A          186 SAGSKEKVDLLKTKFGFDDAFNYKE--ESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMH-GRIAVCGMISQYN  261 (345)
T ss_dssp             EESSHHHHHHHHHTSCCSEEEETTS--CSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEE-EEEEECCCGGGTT
T ss_pred             EeCCHHHHHHHHHHcCCceEEecCC--HHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcC-CEEEEEccccccc
Confidence            999999999998 799999998765  13677777777755899999999985 599999999997 999999975321 


Q ss_pred             ---CccccCHHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          311 ---SPISLNSIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       311 ---~~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                         ....++...++. ++++.|+....+.  ..+.++++++++++|++++   ..|+++++.+|+..+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~  329 (345)
T 2j3h_A          262 LENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGL  329 (345)
T ss_dssp             CSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHH
T ss_pred             cCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHH
Confidence               123455555555 9999998654421  1345899999999999986   468999999887643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=7e-41  Score=352.49  Aligned_cols=288  Identities=18%  Similarity=0.184  Sum_probs=242.7

Q ss_pred             eeEEeecCCCC--eEEEEEec--CCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           17 KAAICRIPGKP--LVIEEIEV--EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        17 ka~~~~~~~~~--l~~~~~~~--p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      ..+.+..+|.+  +++++.+.  |+|++|||+|||.++|||++|++++.|.++     .|.++|||++|+|+++|++|++
T Consensus       211 ~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~-----~~~~lG~E~aG~V~~vG~~V~~  285 (795)
T 3slk_A          211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP-----GVASLGSEGAGVVVETGPGVTG  285 (795)
T ss_dssp             CCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS-----SCCCSCCCEEEEEEEECSSCCS
T ss_pred             EEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC-----CCccccceeEEEEEEeCCCCCc
Confidence            44666666653  88887764  578999999999999999999999998754     3457999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      |++||||+....                                                  |+|+||+++|++.++++|
T Consensus       286 ~~vGDrV~~~~~--------------------------------------------------G~~ae~~~v~~~~~~~iP  315 (795)
T 3slk_A          286 LAPGDRVMGMIP--------------------------------------------------KAFGPLAVADHRMVTRIP  315 (795)
T ss_dssp             SCTTCEEEECCS--------------------------------------------------SCSSSEEEEETTSEEECC
T ss_pred             CCCCCEEEEEec--------------------------------------------------CCCcCEEEeehHHEEECC
Confidence            999999975421                                                  389999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  251 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v  251 (373)
                      +++++++|+++++.++|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +|+++++++ |.+.++ +|++++
T Consensus       316 ~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v  392 (795)
T 3slk_A          316 AGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHL  392 (795)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGE
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhhe
Confidence            999999999999999999998888899999999999997 9999999999999999 899999665 666666 999999


Q ss_pred             EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335          252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY  330 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~  330 (373)
                      +++++   .++.+.+++.+++ ++|+|||++|++. ++.++++++++ |+++.+|.......  ........++++.+..
T Consensus       393 ~~~~~---~~~~~~i~~~t~g~GvDvVld~~gg~~-~~~~l~~l~~~-Gr~v~iG~~~~~~~--~~~~~~~~~~~~~~~~  465 (795)
T 3slk_A          393 ASSRT---CDFEQQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRG-GRFLELGKTDVRDP--VEVADAHPGVSYQAFD  465 (795)
T ss_dssp             ECSSS---STHHHHHHHHSCSSCCSEEEECCCTTT-THHHHTSCTTC-EEEEECCSTTCCCH--HHHHHHSSSEEEEECC
T ss_pred             eecCC---hhHHHHHHHHcCCCCeEEEEECCCcHH-HHHHHHHhcCC-CEEEEeccccccCc--ccccccCCCCEEEEee
Confidence            99988   8999999999988 9999999999866 89999999997 99999997533222  1222222477877765


Q ss_pred             cCCCC---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335          331 FGGLK---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL  369 (373)
Q Consensus       331 ~~~~~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~  369 (373)
                      +....   ..+.+.++++++++|++++   +.|+++++.+|+..+
T Consensus       466 l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l  510 (795)
T 3slk_A          466 TVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHL  510 (795)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHH
Confidence            43211   1367899999999999986   789999999988643

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=1.1e-29  Score=292.83  Aligned_cols=276  Identities=14%  Similarity=0.086  Sum_probs=220.9

Q ss_pred             eEEEEEecCC-CC--CCeEEEEEeeeeccccchhcccCCCCCCC-----CCCCccccCcccEEEEEeCCCCCccCCCCEE
Q 017335           28 LVIEEIEVEP-PK--AWEIRIKILCTSLCHSDVTFWKSSTDLPK-----LPLPVIFGHEAVGVVESVGEYVEEVKERDLV   99 (373)
Q Consensus        28 l~~~~~~~p~-~~--~~evlVkv~~~~i~~~D~~~~~g~~~~~~-----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V   99 (373)
                      +.+.+.+... +.  ++||+|||.++|+|+.|+++..|..+...     ...|.++|+|++|+|          ++||||
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEE
Confidence            5566554333 33  78999999999999999999988754210     134678999999987          379999


Q ss_pred             EeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhh
Q 017335          100 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  179 (373)
Q Consensus       100 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~  179 (373)
                      +...                              .+|                   +|++|+++|++.++++|+++++++
T Consensus      1614 ~g~~------------------------------~~G-------------------~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A         1614 MGMV------------------------------PAE-------------------GLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp             EEEC------------------------------SSC-------------------CSBSEEECCGGGEEECCTTSCHHH
T ss_pred             EEee------------------------------cCC-------------------ceeeEEEcccceEEEeCCCCCHHH
Confidence            7532                              123                   899999999999999999999999


Q ss_pred             hhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcC
Q 017335          180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINP  254 (373)
Q Consensus       180 aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~  254 (373)
                      ||+++++++|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +|++++++++|.+++++    +|+++++++
T Consensus      1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A         1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp             HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence            99999999999998888889999999999987 9999999999999999 99999999999999986    789999999


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  333 (373)
                      ++   .++.+.+.+.+++ ++|+||||++. ..+..++++++++ |+++.+|.........+....+.+++++.|+.+..
T Consensus      1724 ~~---~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 1798 (2512)
T 2vz8_A         1724 RD---TSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDS 1798 (2512)
T ss_dssp             SS---SHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGG
T ss_pred             CC---HHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHH
Confidence            87   8899999999988 89999999985 4599999999997 99999996322111122333334599999986543


Q ss_pred             CC--chhHHHHHHHHH----HcCCCCC---CcccccCCCccccc
Q 017335          334 LK--PRSDIATLAQKY----LDKVHLR---SSFHLCDPNSDSAG  368 (373)
Q Consensus       334 ~~--~~~~~~~~~~~~----~~g~i~~---~~~~~~~~~~a~~~  368 (373)
                      ..  ..+.+.++++++    .+|++.+   +.|+++++.+|+..
T Consensus      1799 ~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~ 1842 (2512)
T 2vz8_A         1799 LFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRY 1842 (2512)
T ss_dssp             TTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHH
T ss_pred             HhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHh
Confidence            21  124455555554    4677765   78999999888754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.89  E-value=1.3e-22  Score=178.88  Aligned_cols=185  Identities=20%  Similarity=0.194  Sum_probs=141.4

Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +.++++|+++++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++++++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999998877789999999999996 9999999999999999 9999999999999999


Q ss_pred             HcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhC
Q 017335          245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG  323 (373)
Q Consensus       245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~  323 (373)
                      ++|++++++..+   .++.+.+.+.+.+ ++|++||+.|... ++.++++++++ |+++.+|........+++...+.++
T Consensus        81 ~~g~~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  155 (198)
T 1pqw_A           81 RLGVEYVGDSRS---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKS  155 (198)
T ss_dssp             TTCCSEEEETTC---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTT
T ss_pred             HcCCCEEeeCCc---HHHHHHHHHHhCCCCCeEEEECCchHH-HHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCC
Confidence            999998888876   6788888887766 8999999998655 99999999997 9999999754211223333333348


Q ss_pred             cEEEEeec------CCCCchhHHHHHHHHHHcCCCCCCc
Q 017335          324 RSVCGTYF------GGLKPRSDIATLAQKYLDKVHLRSS  356 (373)
Q Consensus       324 ~~i~g~~~------~~~~~~~~~~~~~~~~~~g~i~~~~  356 (373)
                      +++.+...      +.....+.++++++++++|++++..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          156 ASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             CEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             cEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            88886533      1111146789999999999998743

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.26  E-value=5.8e-12  Score=113.88  Aligned_cols=166  Identities=16%  Similarity=0.095  Sum_probs=112.8

Q ss_pred             cCCCCEEEeeC-------CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335           93 VKERDLVLPIF-------HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  165 (373)
Q Consensus        93 ~~~Gd~V~~~~-------~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  165 (373)
                      +++||+|++.+       ...|+.|..|+.|..++|...+..       .|                   +..+      
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~-------~G-------------------~~~~------   51 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP-------EG-------------------VKIN------   51 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC-------TT-------------------EEET------
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC-------CC-------------------CEEE------
Confidence            89999999998       788999999999999999754321       12                   2222      


Q ss_pred             cceEEcCCCCChhhhhc-----cchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017335          166 THVVKITPHIPLGIACL-----LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF  240 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~-----l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~  240 (373)
                      ..+++.|+...+.+.+.     +..+...+  .+.....++++++||.+|+| .|..+..+++. +. +|++++.+++..
T Consensus        52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~  126 (248)
T 2yvl_A           52 GFEVYRPTLEEIILLGFERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFY  126 (248)
T ss_dssp             TEEEECCCHHHHHHHTSCCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHH
T ss_pred             EEEEeCCCHHHHHHhcCcCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHH
Confidence            33344443322222111     11122222  25667788999999999998 49999999998 66 999999999988


Q ss_pred             HHHHHc----CC---ceEEcCCCCCCccHHHHHHHhc-C-CCccEEEECCCCH-HHHHHHHHHhccCCceEEEEcc
Q 017335          241 EIGKKF----GI---TDFINPATCGDKTVSQVIKEMT-D-GGADYCFECIGLT-SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       241 ~~~~~l----ga---~~vi~~~~~~~~~~~~~i~~~~-~-~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+++.    +.   ..++..+-          .+.. . +++|+|+...+.. ..+..+.+.|+++ |+++....
T Consensus       127 ~~a~~~~~~~~~~~~~~~~~~d~----------~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          127 KTAQKNLKKFNLGKNVKFFNVDF----------KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHHHTTCCTTEEEECSCT----------TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHHHcCCCCcEEEEEcCh----------hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            887653    32   12232221          1122 2 3799999888765 6789999999997 99987753

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.88  E-value=3.7e-11  Score=117.08  Aligned_cols=182  Identities=14%  Similarity=0.128  Sum_probs=129.0

Q ss_pred             ccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccc
Q 017335           73 VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFL  152 (373)
Q Consensus        73 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~  152 (373)
                      ...|+|+++.|.++|++++++.+|+.+++-.-..                        ++.                ...
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------------------------~~~----------------~~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------------------------AYD----------------RAA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------------------------HHH----------------HHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH------------------------HHH----------------HHH
Confidence            3579999999999999999999999875321000                        000                000


Q ss_pred             cccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHh---CCCCCCEEEEECCChHHHHHHHHHHHCCCCe
Q 017335          153 NISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA---GVEVGSTVAIFGLGAVGLAVAEGARLNRASK  229 (373)
Q Consensus       153 ~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~---~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~  229 (373)
                      ..|++++|+..+...++.+|++++.+.++.. .++.++|.++....   .-.+|++|+|+|+|.+|.++++.++..|+++
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            0136778888888889999998888776653 47778887653322   2358999999999999999999999999889


Q ss_pred             EEEEcCChhHH-HHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHH--HHHHH--h--ccCCceEE
Q 017335          230 IIGVDINPEKF-EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMN--DAFNS--S--REGWGKTV  302 (373)
Q Consensus       230 Vi~~~~~~~~~-~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~~G~~v  302 (373)
                      |++++++.++. ++++++|++ +++.     .++.+.+     .++|+|++|++.+..+.  ..+..  +  +++ +.++
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~-----~~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v  261 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRF-----DELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPIL  261 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecH-----HhHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEE
Confidence            99999999886 677888975 4332     2333322     27999999998654221  34444  4  555 7777


Q ss_pred             EEccc
Q 017335          303 ILGVE  307 (373)
Q Consensus       303 ~~G~~  307 (373)
                      .++..
T Consensus       262 ~vdia  266 (404)
T 1gpj_A          262 IIDIA  266 (404)
T ss_dssp             EEECC
T ss_pred             EEEcc
Confidence            77764

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.84  E-value=3.5e-09  Score=101.56  Aligned_cols=139  Identities=19%  Similarity=0.173  Sum_probs=98.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      +++|+|+|+|++|+++++.++.+|+ +|+++++++++.+.++++++..  +++...   .++.+.+.     ++|+||+|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIGA  237 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHc-----CCCEEEEC
Confidence            4899999999999999999999999 9999999999999998877544  344333   34433332     79999999


Q ss_pred             CCCHHH------HHHHHHHhccCCceEEEEcccCCCC-----ccccCHHHHhh-CcEEEEeec--CCCC-------chhH
Q 017335          281 IGLTSV------MNDAFNSSREGWGKTVILGVEMHGS-----PISLNSIEILK-GRSVCGTYF--GGLK-------PRSD  339 (373)
Q Consensus       281 ~g~~~~------~~~~~~~l~~~~G~~v~~G~~~~~~-----~~~~~~~~~~~-~~~i~g~~~--~~~~-------~~~~  339 (373)
                      ++.+..      ....++.++++ |++++++..+++.     ..+++...+.. ++++.+...  +...       ....
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~  316 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNST  316 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHH
T ss_pred             CCcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHH
Confidence            986542      45678899997 9999999755432     22334333444 788777531  1111       1244


Q ss_pred             HHHHHHHHHcCC
Q 017335          340 IATLAQKYLDKV  351 (373)
Q Consensus       340 ~~~~~~~~~~g~  351 (373)
                      ++.+++++.+|.
T Consensus       317 ~~~l~~l~~~G~  328 (361)
T 1pjc_A          317 LPYVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHHHGG
T ss_pred             HHHHHHHHhCCc
Confidence            678888888873

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.69  E-value=2.8e-08  Score=96.05  Aligned_cols=147  Identities=17%  Similarity=0.237  Sum_probs=98.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCC------------CCcc----HHH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATC------------GDKT----VSQ  264 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~------------~~~~----~~~  264 (373)
                      ++++|+|+|+|.+|++++++++.+|+ +|+++++++++.+.++++|++.+ ++..+.            ..++    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 89999999999999988998754 233110            0000    112


Q ss_pred             HHHHhcCCCccEEEECC---CCH--HH-HHHHHHHhccCCceEEEEcccCCCC-ccccCHHHHhh-CcEEEEeecCCCCc
Q 017335          265 VIKEMTDGGADYCFECI---GLT--SV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEILK-GRSVCGTYFGGLKP  336 (373)
Q Consensus       265 ~i~~~~~~~~d~vid~~---g~~--~~-~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~~-~~~i~g~~~~~~~~  336 (373)
                      .+.+... ++|+||+|+   |.+  .. ....++.++++ +.++.++...++. ..+.+...+.. ++++.|+..  . .
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~--~-p  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN--V-P  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS--G-G
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC--C-c
Confidence            2333333 799999999   531  22 36788999997 9999999754332 11223223334 888888642  1 1


Q ss_pred             hhHHHHHHHHHHcCCCCC
Q 017335          337 RSDIATLAQKYLDKVHLR  354 (373)
Q Consensus       337 ~~~~~~~~~~~~~g~i~~  354 (373)
                      .....++.+++.++.++.
T Consensus       325 ~~~~~~a~~l~~~~~~~~  342 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLNF  342 (384)
T ss_dssp             GGGHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHhHHHH
Confidence            233555788888776654

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.60  E-value=1.4e-07  Score=90.66  Aligned_cols=141  Identities=18%  Similarity=0.219  Sum_probs=89.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      ++++|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+++ +|+....+...  ..++.+.+.     ++|+|++|
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~-----~~DvVi~~  236 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ-----HADLLIGA  236 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC--HHHHHHHHh-----CCCEEEEC
Confidence            46899999999999999999999999 99999999999888766 77653232222  123333321     69999999


Q ss_pred             CCCHHH------HHHHHHHhccCCceEEEEcccCCCC-----ccccCHHHHhh-CcEEEEeecC--CCC-------chhH
Q 017335          281 IGLTSV------MNDAFNSSREGWGKTVILGVEMHGS-----PISLNSIEILK-GRSVCGTYFG--GLK-------PRSD  339 (373)
Q Consensus       281 ~g~~~~------~~~~~~~l~~~~G~~v~~G~~~~~~-----~~~~~~~~~~~-~~~i~g~~~~--~~~-------~~~~  339 (373)
                      ++.+..      ....++.++++ |+++.++...++.     +.+++...+.. ++++.+...-  ...       ..+.
T Consensus       237 ~g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~  315 (369)
T 2eez_A          237 VLVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQT  315 (369)
T ss_dssp             CC-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHH
T ss_pred             CCCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHH
Confidence            996541      56788899997 9999999754432     12333323333 7777765310  011       1345


Q ss_pred             HHHHHHHHHcCC
Q 017335          340 IATLAQKYLDKV  351 (373)
Q Consensus       340 ~~~~~~~~~~g~  351 (373)
                      ++.+++++.+|.
T Consensus       316 ~~~l~~l~~~g~  327 (369)
T 2eez_A          316 LPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHhcCh
Confidence            677888888774

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.54  E-value=2e-07  Score=89.77  Aligned_cols=140  Identities=14%  Similarity=0.134  Sum_probs=94.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      ++++|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+++ +|+....+...  ..++.+.+     .++|+|++|
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~--~~~l~~~l-----~~aDvVi~~  238 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS--AYELEGAV-----KRADLVIGA  238 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC--HHHHHHHH-----HHCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC--HHHHHHHH-----cCCCEEEEC
Confidence            58999999999999999999999999 99999999999888876 67653222211  02333322     168999999


Q ss_pred             CCCHHH------HHHHHHHhccCCceEEEEcccCCC-----CccccCHHHHhh-CcEEEEee-cCCCCc--------hhH
Q 017335          281 IGLTSV------MNDAFNSSREGWGKTVILGVEMHG-----SPISLNSIEILK-GRSVCGTY-FGGLKP--------RSD  339 (373)
Q Consensus       281 ~g~~~~------~~~~~~~l~~~~G~~v~~G~~~~~-----~~~~~~~~~~~~-~~~i~g~~-~~~~~~--------~~~  339 (373)
                      ++.+..      ....++.++++ |+++.++...++     .+.+++...+.. ++.+.+.. +.....        ...
T Consensus       239 ~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~  317 (377)
T 2vhw_A          239 VLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNAT  317 (377)
T ss_dssp             CCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHH
T ss_pred             CCcCCCCCcceecHHHHhcCCCC-cEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHH
Confidence            986543      46788999997 999999975432     233333333333 77766552 111111        122


Q ss_pred             HHHHHHHHHcC
Q 017335          340 IATLAQKYLDK  350 (373)
Q Consensus       340 ~~~~~~~~~~g  350 (373)
                      ++.+++++.+|
T Consensus       318 ~~~~~~l~~~g  328 (377)
T 2vhw_A          318 MPYVLELADHG  328 (377)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhCC
Confidence            46667777665

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.47  E-value=2.9e-07  Score=89.26  Aligned_cols=125  Identities=18%  Similarity=0.186  Sum_probs=85.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE-cCCCC----------CCccH----HHHH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATC----------GDKTV----SQVI  266 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi-~~~~~----------~~~~~----~~~i  266 (373)
                      ++++|+|+|+|.+|+.++++++.+|+ +|+++++++++++.++++|++.+. +..+.          ...++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58999999999999999999999999 999999999999999999986542 21100          00111    1123


Q ss_pred             HHhcCCCccEEEECCCCH-----HHH-HHHHHHhccCCceEEEEcccCCCCccccCHH-H--Hhh-CcEEEEee
Q 017335          267 KEMTDGGADYCFECIGLT-----SVM-NDAFNSSREGWGKTVILGVEMHGSPISLNSI-E--ILK-GRSVCGTY  330 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g~~-----~~~-~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~--~~~-~~~i~g~~  330 (373)
                      .+... ++|+||++++.+     .++ ...++.++++ +.++.++...++ .++.... .  +.. ++++.|+.
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeC
Confidence            33322 699999995321     222 5788999997 999999975333 2333211 1  334 89999864

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.39  E-value=1.2e-06  Score=86.70  Aligned_cols=117  Identities=18%  Similarity=0.216  Sum_probs=89.1

Q ss_pred             hhhhHHHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHH
Q 017335          186 GVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  264 (373)
Q Consensus       186 ~~~ta~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~  264 (373)
                      ...++|.++.+... ..+|++|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++ ++        ++.+
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~--------~l~e  325 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV--------TVEE  325 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHH
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee--------cHHH
Confidence            34455665433222 7899999999999999999999999999 999999999999889899985 32        1222


Q ss_pred             HHHHhcCCCccEEEECCCCHHHHH-HHHHHhccCCceEEEEcccCCCCccccCHHHHhh
Q 017335          265 VIKEMTDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVEMHGSPISLNSIEILK  322 (373)
Q Consensus       265 ~i~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  322 (373)
                      .+     .++|+|+++++....+. ..++.++++ |+++.+|...    .+++...+..
T Consensus       326 ~l-----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~----~eId~~aL~~  374 (494)
T 3ce6_A          326 AI-----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD----NEIDMAGLER  374 (494)
T ss_dssp             HG-----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG----GGBCHHHHHH
T ss_pred             HH-----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC----CccCHHHHHH
Confidence            11     27999999999776565 788999997 9999998742    2455555544

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.11  E-value=6e-06  Score=75.10  Aligned_cols=94  Identities=14%  Similarity=0.154  Sum_probs=69.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .++.+||.+|+|. |..+..+++.. |. +|++++.+++..+.+++.+.. .++..+.   .++     ...++.+|+|+
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~~~fD~v~  153 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAII  153 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhC-----CCCCCceeEEE
Confidence            6889999999988 98999999986 66 999999999999998876532 3333322   111     12234799999


Q ss_pred             ECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          279 ECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .... ...+..+.+.|+++ |+++....
T Consensus       154 ~~~~-~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          154 RIYA-PCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             EESC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             EeCC-hhhHHHHHHhcCCC-cEEEEEEc
Confidence            6443 44489999999997 99887754

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.11  E-value=5e-06  Score=76.21  Aligned_cols=101  Identities=16%  Similarity=0.238  Sum_probs=73.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCC-c--eEEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGI-T--DFINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga-~--~vi~~~~~~~~~~~~~  265 (373)
                      +.....++++++||.+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|. +  .++..+      +.+.
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~  176 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD------ISEG  176 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC------GGGC
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC------HHHc
Confidence            45667899999999999988 888889999864 2399999999988887764    343 1  233222      2111


Q ss_pred             HHHhcCCCccEEEECCCCH-HHHHHHHHHhccCCceEEEEc
Q 017335          266 IKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       266 i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G  305 (373)
                         +.++.+|+|+...... ..+..+.+.|+++ |+++...
T Consensus       177 ---~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~  213 (277)
T 1o54_A          177 ---FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  213 (277)
T ss_dssp             ---CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             ---ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence               2223799999766654 5688999999997 9988774

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.09  E-value=6.8e-06  Score=79.14  Aligned_cols=125  Identities=20%  Similarity=0.212  Sum_probs=84.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC-------------CCCCCccH----HH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-------------ATCGDKTV----SQ  264 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~-------------~~~~~~~~----~~  264 (373)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|+++++++++++.++++|++.+...             ......++    ..
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57899999999999999999999999 99999999999999999998532110             00000011    11


Q ss_pred             HHHHhcCCCccEEEECCCCH------HHHHHHHHHhccCCceEEEEcccCCCCcccc--CHHHHhh-CcEEEEee
Q 017335          265 VIKEMTDGGADYCFECIGLT------SVMNDAFNSSREGWGKTVILGVEMHGSPISL--NSIEILK-GRSVCGTY  330 (373)
Q Consensus       265 ~i~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~--~~~~~~~-~~~i~g~~  330 (373)
                      .+.+.. .++|+||.|+..+      ......++.++++ +.+++++..+++. ++.  +-..+.. ++++.|..
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG~-~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGGN-IEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTCS-BTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCCC-ccccCCCCeEEECCEEEEEeC
Confidence            222221 1799999995322      1246888999997 9999998765543 222  1111223 78888774

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.05  E-value=1.5e-05  Score=76.13  Aligned_cols=125  Identities=20%  Similarity=0.222  Sum_probs=84.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC------CCCC---Ccc-H---HHHHHH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP------ATCG---DKT-V---SQVIKE  268 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~------~~~~---~~~-~---~~~i~~  268 (373)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.++++|++.+-..      ..+.   .++ .   .+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 89999999999999999998533100      0000   000 0   112222


Q ss_pred             hcCCCccEEEECCCCH------HHHHHHHHHhccCCceEEEEcccCCCCcccc--CHHHHhh-CcEEEEee
Q 017335          269 MTDGGADYCFECIGLT------SVMNDAFNSSREGWGKTVILGVEMHGSPISL--NSIEILK-GRSVCGTY  330 (373)
Q Consensus       269 ~~~~~~d~vid~~g~~------~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~--~~~~~~~-~~~i~g~~  330 (373)
                      .. ..+|+||.++..+      ......++.++++ +.+++++..+++. ++.  +-..+.. ++.+.+..
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG~-~e~t~~~~~~~~~gV~~~~v~  329 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGGN-CELTEPGRTIVHHGVTITSPL  329 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCS-BTTCCTTCEEEETTEEEECCS
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCCc-cccccCCCeEEECCEEEEeeC
Confidence            22 2799999986322      1246888999997 9999999876654 321  1111223 67777653

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=98.01  E-value=4.4e-06  Score=78.88  Aligned_cols=104  Identities=14%  Similarity=0.166  Sum_probs=69.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----C-------------CceEEcCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----G-------------ITDFINPA  255 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~l----g-------------a~~vi~~~  255 (373)
                      +.....++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++.    |             .-.++..+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44566889999999999987 8888888888763 4999999999887777642    1             11233222


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCH-HHHHHHHHHhccCCceEEEEc
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .   .+.   ...+.++.+|+|+-....+ ..+..+.+.|+++ |+++.+.
T Consensus       176 ~---~~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  219 (336)
T 2b25_A          176 I---SGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  219 (336)
T ss_dssp             T---TCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             h---HHc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            2   111   1112223799999554433 3478899999997 9998764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.97  E-value=3.2e-05  Score=64.37  Aligned_cols=93  Identities=20%  Similarity=0.142  Sum_probs=66.3

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      ....++++|+|+|+|.+|+..++.++..|. +|+++++++++.+.++ +.|.. ++..+.   .+ .+.+.+..-.++|+
T Consensus        14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~-~~~~d~---~~-~~~l~~~~~~~ad~   87 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGF-TVVGDA---AE-FETLKECGMEKADM   87 (155)
T ss_dssp             ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSE-EEESCT---TS-HHHHHTTTGGGCSE
T ss_pred             hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCc-EEEecC---CC-HHHHHHcCcccCCE
Confidence            345678999999999999999999999999 9999999999888777 66765 333322   12 12233321127999


Q ss_pred             EEECCCCHHHHHHHHHHhcc
Q 017335          277 CFECIGLTSVMNDAFNSSRE  296 (373)
Q Consensus       277 vid~~g~~~~~~~~~~~l~~  296 (373)
                      ||.+++.......+...++.
T Consensus        88 Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           88 VFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHH
Confidence            99999987755566566554

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.95  E-value=2.8e-05  Score=71.82  Aligned_cols=99  Identities=13%  Similarity=0.163  Sum_probs=74.4

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHHh
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...+++++++||.+|+|+.++.++.+++..|+ +|++++.+++..+.+++    .|.+  .++..+.   .       ++
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa---~-------~l  184 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE---T-------VI  184 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG---G-------GG
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch---h-------hC
Confidence            35678999999999999877888888888898 99999999998888865    3532  2332222   1       12


Q ss_pred             cCCCccEEEECCCCH---HHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .++.||+|+.....+   ..+..+.+.|++| |+++....
T Consensus       185 ~d~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          185 DGLEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             GGCCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CCCCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            334899999665543   4688999999997 99987653

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.91  E-value=6.3e-06  Score=67.89  Aligned_cols=107  Identities=15%  Similarity=0.141  Sum_probs=75.2

Q ss_pred             hhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCceEEcCCCCCCccHHH
Q 017335          186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQ  264 (373)
Q Consensus       186 ~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~  264 (373)
                      ++++++.++ +......+++|+|+|+|.+|.+.++.++..|+ +|++.++++++.+. ++++|.+ +....     ++.+
T Consensus         5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~-~~~~~-----~~~~   76 (144)
T 3oj0_A            5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYE-YVLIN-----DIDS   76 (144)
T ss_dssp             CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCE-EEECS-----CHHH
T ss_pred             cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCc-eEeec-----CHHH
Confidence            345555543 33444459999999999999999999988999 59999999988765 5667753 22222     3333


Q ss_pred             HHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          265 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       265 ~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .+.     ++|+|+++++...... ....++++ +.++.++.+
T Consensus        77 ~~~-----~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           77 LIK-----NNDVIITATSSKTPIV-EERSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             HHH-----TCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCSS
T ss_pred             Hhc-----CCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccCC
Confidence            332     6899999999764222 22678886 999998864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.88  E-value=0.00012  Score=57.21  Aligned_cols=94  Identities=12%  Similarity=0.135  Sum_probs=65.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceEE-cCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~lga~~vi-~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .+.+|+|+|+|.+|...++.+...| . +|+++++++++.+.++..+...+. +..+   .   +.+.+... ++|+||+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~---~~~~~~~~-~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD---E---AGLAKALG-GFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC---H---HHHHHHTT-TCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC---H---HHHHHHHc-CCCEEEE
Confidence            3568999999999999999999999 6 899999999998888766654332 2222   2   23333332 7999999


Q ss_pred             CCCCHHHHHHHHHHhccCCceEEEE
Q 017335          280 CIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +++..........+.+.+ -.++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CEEECC
T ss_pred             CCCchhhHHHHHHHHHhC-CCEEEe
Confidence            998666444444444554 555544

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.81  E-value=0.0001  Score=71.17  Aligned_cols=101  Identities=14%  Similarity=0.242  Sum_probs=77.8

Q ss_pred             HHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHh
Q 017335          191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       191 ~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.++.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|.. +.        ++.+    .
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~--------~Lee----a  272 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV--------KLNE----V  272 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHH----H
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec--------cHHH----H
Confidence            333444444 4589999999999999999999999999 999999998877777777753 21        2222    2


Q ss_pred             cCCCccEEEECCCCHHHHH-HHHHHhccCCceEEEEccc
Q 017335          270 TDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       270 ~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~  307 (373)
                      . ...|+|+.|.|....+. ..+..++++ +.++.+|..
T Consensus       273 l-~~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg  309 (435)
T 3gvp_A          273 I-RQVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHS  309 (435)
T ss_dssp             T-TTCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSST
T ss_pred             H-hcCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCC
Confidence            1 26899999988665555 788999997 999999874

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.79  E-value=8e-05  Score=66.95  Aligned_cols=101  Identities=15%  Similarity=0.193  Sum_probs=73.7

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~  265 (373)
                      +.....++++++||.+|+|. |..+..+++.++ ..+|++++.+++..+.+++    .|..   .++..+      +.+ 
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~-  156 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD------IYE-  156 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC------GGG-
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc------hhh-
Confidence            45667889999999999987 888889998853 3399999999988887764    3532   233222      211 


Q ss_pred             HHHhcCCCccEEEECCCCH-HHHHHHHHHhccCCceEEEEc
Q 017335          266 IKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       266 i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G  305 (373)
                        ....+.+|+|+...... ..+..+.+.|+++ |+++.+.
T Consensus       157 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  194 (255)
T 3mb5_A          157 --GIEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT  194 (255)
T ss_dssp             --CCCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             --ccCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence              12223799999766654 3689999999997 9998774

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.75  E-value=0.00011  Score=68.00  Aligned_cols=111  Identities=19%  Similarity=0.186  Sum_probs=79.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -.|++|+|+|.|.+|..+++.++.+|+ +|++.+++.++.+.++++|+.. ++.     .++.    +.. ..+|+|+.+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~-----~~l~----~~l-~~aDvVi~~  220 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI-----SKAA----QEL-RDVDVCINT  220 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG-----GGHH----HHT-TTCSEEEEC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh-----hhHH----HHh-cCCCEEEEC
Confidence            468999999999999999999999999 9999999998877777788753 221     1222    222 279999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  328 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g  328 (373)
                      ++....-...+..++++ +.++.++..+..  .++  ..... +..+..
T Consensus       221 ~p~~~i~~~~l~~mk~~-~~lin~ar~~~~--~~~--~~a~~~Gv~~~~  264 (293)
T 3d4o_A          221 IPALVVTANVLAEMPSH-TFVIDLASKPGG--TDF--RYAEKRGIKALL  264 (293)
T ss_dssp             CSSCCBCHHHHHHSCTT-CEEEECSSTTCS--BCH--HHHHHHTCEEEE
T ss_pred             CChHHhCHHHHHhcCCC-CEEEEecCCCCC--CCH--HHHHHCCCEEEE
Confidence            88644224567889997 999999863332  233  23233 766653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.71  E-value=0.0004  Score=59.17  Aligned_cols=95  Identities=15%  Similarity=0.233  Sum_probs=67.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceEE-cCCCCCCccHHHHHHHhcC-CCccEEEE
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTD-GGADYCFE  279 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~vi-~~~~~~~~~~~~~i~~~~~-~~~d~vid  279 (373)
                      +++|+|+|.|.+|...++.++.. |. +|+++++++++.+.+++.|...+. |..+   .+   .+.+.++ .++|+|+.
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~---~~---~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD---PD---FWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC---HH---HHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC---HH---HHHhccCCCCCCEEEE
Confidence            67899999999999999999998 99 899999999999998888876443 2222   22   2333312 37999999


Q ss_pred             CCCCHHHHHHHHHHhccC--CceEEEE
Q 017335          280 CIGLTSVMNDAFNSSREG--WGKTVIL  304 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~~--~G~~v~~  304 (373)
                      +++.......+...++..  ..+++..
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999866444444444442  1455544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.63  E-value=0.00019  Score=66.63  Aligned_cols=112  Identities=19%  Similarity=0.183  Sum_probs=79.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -.+++|+|+|.|.+|..+++.++.+|+ +|++.+++.++.+.++++|+. +++.     .++    .+.. ..+|+|+.+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~-----~~l----~~~l-~~aDvVi~~  222 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT-----DEL----KEHV-KDIDICINT  222 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG-----GGH----HHHS-TTCSEEEEC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch-----hhH----HHHh-hCCCEEEEC
Confidence            468999999999999999999999999 999999999887777777764 3321     122    2222 279999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      ++....-...+..++++ +.++.++..+..  .++  ..... +..+...
T Consensus       223 ~p~~~i~~~~~~~mk~g-~~lin~a~g~~~--~~~--~~a~~~G~~~i~~  267 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPK-TLILDLASRPGG--TDF--KYAEKQGIKALLA  267 (300)
T ss_dssp             CSSCCBCHHHHTTSCTT-CEEEECSSTTCS--BCH--HHHHHHTCEEEEC
T ss_pred             CChhhhCHHHHHhCCCC-CEEEEEeCCCCC--cCH--HHHHHCCCEEEEC
Confidence            98644224567889997 999999864332  233  22233 6666533

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.63  E-value=7.7e-05  Score=66.99  Aligned_cols=102  Identities=14%  Similarity=0.055  Sum_probs=73.5

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc-----CCce--EEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF-----GITD--FINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~l-----ga~~--vi~~~~~~~~~~~~~  265 (373)
                      +.....++++++||.+|+|. |..+..+++..| ..+|++++.+++..+.+++.     |.+.  ++..+-   .+.   
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~---~~~---  160 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL---EEA---  160 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG---GGC---
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch---hhc---
Confidence            45667889999999999986 888889999864 23999999999988887653     5322  222221   110   


Q ss_pred             HHHhcCCCccEEEECCCCH-HHHHHHHHHhccCCceEEEEc
Q 017335          266 IKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       266 i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G  305 (373)
                        .+.++.+|+|+...... ..+..+.+.|+++ |+++.+.
T Consensus       161 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  198 (258)
T 2pwy_A          161 --ELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYL  198 (258)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             --CCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEe
Confidence              12223799999766654 5688999999997 9988875

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.56  E-value=0.00046  Score=62.81  Aligned_cols=102  Identities=17%  Similarity=0.173  Sum_probs=72.3

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc-----C--Cc--eEEcCCCCCCccHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF-----G--IT--DFINPATCGDKTVS  263 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~l-----g--a~--~vi~~~~~~~~~~~  263 (373)
                      +.....++++++||.+|+| .|..+..+++..+ ..+|++++.+++..+.+++.     |  ..  .++..+-   .+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~---~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL---ADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG---GGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch---Hhc-
Confidence            4566788999999999998 4888889998753 23999999999988877642     4  22  2332221   110 


Q ss_pred             HHHHHhcCCCccEEEECCCCH-HHHHHHHHHhccCCceEEEEc
Q 017335          264 QVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       264 ~~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G  305 (373)
                          ...++.+|+|+...... ..+..+.+.|+++ |+++.+.
T Consensus       166 ----~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~  203 (280)
T 1i9g_A          166 ----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  203 (280)
T ss_dssp             ----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ----CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEe
Confidence                11123799999665544 5688999999997 9988774

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.52  E-value=0.0015  Score=53.17  Aligned_cols=96  Identities=8%  Similarity=0.119  Sum_probs=68.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      -.++|+|+|.|.+|...++.++..|. +|+++++++++.+.+++.|...+. .+. .+.+.   +.+..-..+|+++-++
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~-~~~~~---l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNA-ANEEI---MQLAHLECAKWLILTI   79 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCT-TSHHH---HHHTTGGGCSEEEECC
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCC-CCHHH---HHhcCcccCCEEEEEC
Confidence            35689999999999999999999999 999999999999999888875443 322 11322   3332112799999999


Q ss_pred             CCHHHHH---HHHHHhccCCceEEEE
Q 017335          282 GLTSVMN---DAFNSSREGWGKTVIL  304 (373)
Q Consensus       282 g~~~~~~---~~~~~l~~~~G~~v~~  304 (373)
                      +....-.   ...+.+.+. .+++..
T Consensus        80 ~~~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           80 PNGYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             SCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCC-CeEEEE
Confidence            9765222   334445564 665544

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.50  E-value=0.00057  Score=66.22  Aligned_cols=98  Identities=16%  Similarity=0.177  Sum_probs=75.2

Q ss_pred             HHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          194 AWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       194 ~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|.. +.        ++.+.+     .
T Consensus       237 I~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~-vv--------~LeElL-----~  301 (464)
T 3n58_A          237 IRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFE-VV--------TLDDAA-----S  301 (464)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE-EC--------CHHHHG-----G
T ss_pred             HHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCce-ec--------cHHHHH-----h
Confidence            444333 4689999999999999999999999999 999999988776666666753 22        222221     1


Q ss_pred             CccEEEECCCCHHHH-HHHHHHhccCCceEEEEccc
Q 017335          273 GADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       273 ~~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .+|+|+.+.+....+ ...+..++++ +.++.+|..
T Consensus       302 ~ADIVv~atgt~~lI~~e~l~~MK~G-AILINvGRg  336 (464)
T 3n58_A          302 TADIVVTTTGNKDVITIDHMRKMKDM-CIVGNIGHF  336 (464)
T ss_dssp             GCSEEEECCSSSSSBCHHHHHHSCTT-EEEEECSSS
T ss_pred             hCCEEEECCCCccccCHHHHhcCCCC-eEEEEcCCC
Confidence            689999999866544 5788999997 999999864

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.49  E-value=0.00077  Score=65.26  Aligned_cols=118  Identities=14%  Similarity=0.195  Sum_probs=85.0

Q ss_pred             HHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335          192 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       192 ~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .++.+... .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...+         ++.+    ..
T Consensus       199 dgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~---------sL~e----al  264 (436)
T 3h9u_A          199 DGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL---------LVED----VV  264 (436)
T ss_dssp             HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC---------CHHH----HT
T ss_pred             HHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec---------CHHH----HH
Confidence            33444444 3479999999999999999999999999 99999999888777777776321         2222    22


Q ss_pred             CCCccEEEECCCCHHHHH-HHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          271 DGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       271 ~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                       ...|+|+.+.+....+. ..+..|+++ +.++.+|..    ..+++...+.. ..++.++
T Consensus       265 -~~ADVVilt~gt~~iI~~e~l~~MK~g-AIVINvgRg----~vEID~~~L~~~~~~~~~i  319 (436)
T 3h9u_A          265 -EEAHIFVTTTGNDDIITSEHFPRMRDD-AIVCNIGHF----DTEIQVAWLKANAKERVEV  319 (436)
T ss_dssp             -TTCSEEEECSSCSCSBCTTTGGGCCTT-EEEEECSSS----GGGBCHHHHHHHCSEEEEE
T ss_pred             -hhCCEEEECCCCcCccCHHHHhhcCCC-cEEEEeCCC----CCccCHHHHHhhcCceEee
Confidence             26899999888654344 677889997 998888742    33577766665 5555544

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.49  E-value=0.0003  Score=69.11  Aligned_cols=98  Identities=17%  Similarity=0.239  Sum_probs=75.7

Q ss_pred             HHHHhCC-CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          194 AWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       194 ~~~~~~~-~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +.+..+. -.|++|+|+|+|++|++.++.++..|+ +|+++++++.+...+...|++ +.+..     +       . ..
T Consensus       255 i~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le-----e-------~-~~  319 (488)
T 3ond_A          255 LMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE-----D-------V-VS  319 (488)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG-----G-------T-TT
T ss_pred             HHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH-----H-------H-HH
Confidence            4444454 479999999999999999999999999 999999999888887777753 22111     1       1 12


Q ss_pred             CccEEEECCCCHHHHH-HHHHHhccCCceEEEEccc
Q 017335          273 GADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       273 ~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~  307 (373)
                      .+|+++++.|....+. ..++.++++ +.++..|..
T Consensus       320 ~aDvVi~atG~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          320 EADIFVTTTGNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             TCSEEEECSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             hcCEEEeCCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            6899999999655443 478899997 999999864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.42  E-value=0.001  Score=59.87  Aligned_cols=80  Identities=11%  Similarity=0.029  Sum_probs=54.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      +++|||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+.+... .+..+-..+.++.+.+.+...  +++|+++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            478999998 8999999999999999 9999999998887776544332 222222111233333333222  3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.41  E-value=0.0005  Score=62.87  Aligned_cols=104  Identities=17%  Similarity=0.242  Sum_probs=72.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceE-EcCCCCCCcc-HHHHHHHhcC--CCc
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKT-VSQVIKEMTD--GGA  274 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-i~~~~~~~~~-~~~~i~~~~~--~~~  274 (373)
                      -.|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ +++|.... +..+- .+++ +.+.+.+...  |++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADS-ANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCT-TCHHHHHHHHHHHHHHHSCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecC-CCHHHHHHHHHHHHHHcCCC
Confidence            36899999998 8999999999999999 999999999887765 45664322 22221 1232 3222333222  379


Q ss_pred             cEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEccc
Q 017335          275 DYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       275 d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      |+++++.|...                         ....+++.|+++ |+++.++..
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~  161 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGST  161 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeeh
Confidence            99999887411                         344566678886 999988753

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.36  E-value=0.0023  Score=55.58  Aligned_cols=100  Identities=15%  Similarity=0.186  Sum_probs=72.9

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i  266 (373)
                      +.....+.++++||-+|+|. |..++.+++. +. +|++++.+++..+.+++    .|..   .++..+.   .+.    
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~----  116 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PAA----  116 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TGG----
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hhh----
Confidence            45667889999999999987 8888888888 77 99999999998887754    4543   3343332   111    


Q ss_pred             HHhcC-CCccEEEECCCCHH-HHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTD-GGADYCFECIGLTS-VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~-~~~d~vid~~g~~~-~~~~~~~~l~~~~G~~v~~G~  306 (373)
                        +.. ..+|+|+...+... .+..+.+.|+++ |+++....
T Consensus       117 --~~~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          117 --LADLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             --GTTSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             --cccCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence              111 27999996644333 688999999997 99987754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.34  E-value=0.002  Score=52.12  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=58.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      ..+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.|.. ++..+. .+++   .+.+..-.++|+|+.+++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~-~~~gd~-~~~~---~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFD-AVIADP-TDES---FYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCE-EEECCT-TCHH---HHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCc-EEECCC-CCHH---HHHhCCcccCCEEEEecC
Confidence            4679999999999999999999999 999999999999988887764 333332 1122   233332237999999999


Q ss_pred             CHH
Q 017335          283 LTS  285 (373)
Q Consensus       283 ~~~  285 (373)
                      ...
T Consensus        80 ~~~   82 (141)
T 3llv_A           80 DDE   82 (141)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            755

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.28  E-value=0.00084  Score=54.17  Aligned_cols=76  Identities=18%  Similarity=0.299  Sum_probs=55.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +++|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+.. ++..+.   .+ .+.+.+..-+++|+|+.+++
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~-~~~~d~---~~-~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATH-AVIANA---TE-ENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSE-EEECCT---TC-HHHHHTTTGGGCSEEEECCC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCE-EEEeCC---CC-HHHHHhcCCCCCCEEEECCC
Confidence            5679999999999999999999998 899999998887777666653 332222   12 22333331237999999999


Q ss_pred             CH
Q 017335          283 LT  284 (373)
Q Consensus       283 ~~  284 (373)
                      ..
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            74

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.23  E-value=0.0037  Score=53.86  Aligned_cols=102  Identities=15%  Similarity=0.191  Sum_probs=73.5

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      +.....++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .|.+  .++..+.   .+.     
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~-----  102 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PEG-----  102 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TTT-----
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hhh-----
Confidence            45667889999999999986 8888899988644499999999998888764    3432  2333322   111     


Q ss_pred             HhcC-CCccEEEECCC---CHHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTD-GGADYCFECIG---LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~-~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ... +.+|+|+....   ....+..+.+.|+++ |+++....
T Consensus       103 -~~~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          103 -LDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             -CTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             -hhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence             111 37999997654   245688999999997 99998754

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.20  E-value=0.0015  Score=54.73  Aligned_cols=104  Identities=21%  Similarity=0.231  Sum_probs=72.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-e-EEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-D-FINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~-vi~~~~~~~~~~~~~i~  267 (373)
                      +.....++++++||.+|+|. |..+..+++..+..+|++++.+++..+.+++    .|.. . .+..+.   .+   .+.
T Consensus        17 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~---~~---~~~   89 (178)
T 3hm2_A           17 AISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGA---PR---AFD   89 (178)
T ss_dssp             HHHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCT---TG---GGG
T ss_pred             HHHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecch---Hh---hhh
Confidence            45566789999999999987 8889999988743499999999988888764    3443 2 222221   11   111


Q ss_pred             HhcCCCccEEEECCCCH--HHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTDGGADYCFECIGLT--SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~~~~d~vid~~g~~--~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      . ..+.+|+|+......  ..+..+.+.|+++ |+++....
T Consensus        90 ~-~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           90 D-VPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             G-CCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             c-cCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            1 114799999655433  3689999999997 99987654

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.20  E-value=0.0019  Score=55.08  Aligned_cols=99  Identities=20%  Similarity=0.192  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC---------CeEEEEcCChhHHHHHHHcCCceEE-cCCCCCCccHHHHHHH
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRA---------SKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKE  268 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~---------~~Vi~~~~~~~~~~~~~~lga~~vi-~~~~~~~~~~~~~i~~  268 (373)
                      .++++++||.+|+|+ |..+..+++..|.         .+|+++|.++...     .....++ ..+- ...++.+.+.+
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~-~~~~~~~~~~~   91 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADV-TDPRTSQRILE   91 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCT-TSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccC-CCHHHHHHHHH
Confidence            368899999999988 9999999999873         4899999887431     1112344 3222 12334444444


Q ss_pred             hcCC-CccEEEE-----CCCCH------------HHHHHHHHHhccCCceEEEEc
Q 017335          269 MTDG-GADYCFE-----CIGLT------------SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       269 ~~~~-~~d~vid-----~~g~~------------~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..++ .||+|+.     +++..            ..+..+.+.|+++ |+++..-
T Consensus        92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  145 (196)
T 2nyu_A           92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKT  145 (196)
T ss_dssp             HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence            4554 8999994     33332            4577889999997 9998763

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.11  E-value=0.0016  Score=58.63  Aligned_cols=103  Identities=17%  Similarity=0.216  Sum_probs=67.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCc-cHHHHHHHhcC--CCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDK-TVSQVIKEMTD--GGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~-~~~~~i~~~~~--~~~d  275 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+- .+. ++.+.+.+...  +++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDI-ADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccC-CCHHHHHHHHHHHHHHhCCCC
Confidence            5789999998 8999999999999999 9999999988876654 34432 2222222 112 22222222211  3799


Q ss_pred             EEEECCCCH----------H---------------HHHHHHHHhccCCceEEEEccc
Q 017335          276 YCFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       276 ~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++++.|..          .               ..+.+...++++ |+++.++..
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~  140 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSV  140 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECCh
Confidence            999988741          1               233444556676 999998753

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.10  E-value=0.00075  Score=58.34  Aligned_cols=132  Identities=17%  Similarity=0.258  Sum_probs=81.9

Q ss_pred             ceeeeEE-eeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhC--CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEE
Q 017335          156 SFTEYSV-VDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG--VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIG  232 (373)
Q Consensus       156 ~~a~~~~-v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~--~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~  232 (373)
                      .|.+|.. .+....+.+++++++..+..-....      +.+...  ++++++||-+|+|. |..+..+++ .+..+|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~------~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQTTQL------AMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCHHHHHH------HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCCccHHH------HHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence            5677776 6778888888887766653211111      112222  67899999999977 777777776 45559999


Q ss_pred             EcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH---HHHHHHHHhccCCceEEE
Q 017335          233 VDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       233 ~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~  303 (373)
                      ++.+++..+.+++    .+..  .++..+.   .       +..++.+|+|+.......   .+..+.+.|+++ |+++.
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~-------~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~  157 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSL---L-------ADVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIF  157 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESST---T-------TTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEeccc---c-------ccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEE
Confidence            9999988877764    3432  3333322   1       122348999997654332   345566788997 99988


Q ss_pred             Ecc
Q 017335          304 LGV  306 (373)
Q Consensus       304 ~G~  306 (373)
                      ...
T Consensus       158 ~~~  160 (205)
T 3grz_A          158 SGI  160 (205)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.06  E-value=0.004  Score=56.21  Aligned_cols=81  Identities=20%  Similarity=0.251  Sum_probs=55.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceEEcCCCCCCc-cHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDK-TVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~vi~~~~~~~~-~~~~~i~~~~~--~~  273 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|.+.....-+..++ ++.+.+.+...  ++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5899999998 8999999999999999 999999998876554    34454333222221223 33333333322  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus        87 iDiLVNNAG~   96 (255)
T 4g81_D           87 VDILINNAGI   96 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.01  E-value=0.0046  Score=54.47  Aligned_cols=105  Identities=13%  Similarity=0.110  Sum_probs=70.3

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHH
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i  266 (373)
                      ....+.+++.+||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|..  .+ ....   .+..+.+
T Consensus        49 ~~~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i-~~~~---gda~~~l  122 (221)
T 3dr5_A           49 AATTNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRV-RFLL---SRPLDVM  122 (221)
T ss_dssp             HHHSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGE-EEEC---SCHHHHG
T ss_pred             HHhhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcE-EEEE---cCHHHHH
Confidence            3444555667999999987 88889999986  45 99999999998777754    4532  22 1111   2333333


Q ss_pred             HHhcCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..+.++.||+||-....   ...++.+.+.|++| |.++.-..
T Consensus       123 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn~  164 (221)
T 3dr5_A          123 SRLANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLADA  164 (221)
T ss_dssp             GGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETTT
T ss_pred             HHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            33324589999954332   23578899999997 99887543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.00  E-value=0.0014  Score=58.77  Aligned_cols=103  Identities=14%  Similarity=0.114  Sum_probs=67.3

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcCCCccEE
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      +-.|+++||+|+ +++|++.++.+...|+ +|+++++++++.+..+.-.+. ...|-.+   ++-.+++-+.. +++|++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g~iDiL   82 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD---SQRLQRLFEAL-PRLDVL   82 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC---HHHHHHHHHHC-SCCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence            346999999998 8999999999999999 999999988766543221111 1122222   33333333322 479999


Q ss_pred             EECCCCHH-----------------------HHHHHHHHhccCCceEEEEccc
Q 017335          278 FECIGLTS-----------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       278 id~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++.|...                       ..+.+...++.++|++|.++..
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            99987411                       2334555664423999999753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.00  E-value=0.0049  Score=55.47  Aligned_cols=104  Identities=15%  Similarity=0.214  Sum_probs=65.7

Q ss_pred             CCCEEEEECC-Ch--HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC--ceEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--TDFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~--vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga--~~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |.  +|.+.++.+...|+ +|++++++++..+.+++    .+.  -.++..+-....++.+.+.+... 
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999987 66  99999988888999 89999988765544433    332  12222222112334333333322 


Q ss_pred             -CCccEEEECCCCHH-----------------------------HHHHHHHHhccCCceEEEEccc
Q 017335          272 -GGADYCFECIGLTS-----------------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       272 -~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                       +.+|+++++.|...                             ..+.++..++++ |+++.++..
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~  149 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG-GSIVTLTYL  149 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECG
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-ceEEEEecc
Confidence             37999999876310                             233445566676 999998753

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.99  E-value=0.0034  Score=55.88  Aligned_cols=101  Identities=16%  Similarity=0.186  Sum_probs=68.8

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----C-CceEEcCCCCCCccHHHHHHHh
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----G-ITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~l----g-a~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +...++||++||=+|+|+ |..+..+|+..|. .+|++++.+++..+.+++.    + ...|+ .+...+...     ..
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~-~d~~~p~~~-----~~  143 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPIL-GDARFPEKY-----RH  143 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEE-SCTTCGGGG-----TT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEE-EeccCcccc-----cc
Confidence            446799999999999988 8899999998875 3899999999988877643    2 12222 221000110     11


Q ss_pred             cCCCccEEEECCCCH----HHHHHHHHHhccCCceEEEE
Q 017335          270 TDGGADYCFECIGLT----SVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       270 ~~~~~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ..+.+|+||......    ..+..+.+.|+++ |+++..
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            123789988554432    2467788899997 998865

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.99  E-value=0.0014  Score=58.23  Aligned_cols=100  Identities=13%  Similarity=0.098  Sum_probs=70.1

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....++++||.+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+...
T Consensus        56 ~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~------~d~~~~~~~~  128 (239)
T 2hnk_A           56 TKISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL------GSALETLQVL  128 (239)
T ss_dssp             HHHHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHH
T ss_pred             HHhhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE------CCHHHHHHHH
Confidence            3456789999999985 888899999874 2399999999988877764    3542   2222      2333333322


Q ss_pred             c--------------C-CCccEEEECCCCH---HHHHHHHHHhccCCceEEEEc
Q 017335          270 T--------------D-GGADYCFECIGLT---SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~--------------~-~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .              + +.||+|+......   ..+..+.+.|+++ |+++...
T Consensus       129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          129 IDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             HHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             HhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            1              2 5799999766544   4578889999997 9988754

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.99  E-value=0.0015  Score=56.63  Aligned_cols=100  Identities=15%  Similarity=0.054  Sum_probs=70.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      +.....++++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++    .|..  .++..+.      .+.. 
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~~~-  138 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG------WQGW-  138 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG------GGCC-
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc------ccCC-
Confidence            45667889999999999985 8888888888 66 99999999998887764    3432  2332221      1100 


Q ss_pred             HhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          268 EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       268 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                       ...+.||+|+.........+.+.+.|+++ |+++..-
T Consensus       139 -~~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          139 -QARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             -GGGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             -ccCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence             11237999998766555456788999997 9887653

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.98  E-value=0.00057  Score=60.65  Aligned_cols=99  Identities=19%  Similarity=0.270  Sum_probs=71.0

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--EEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--vi~~~~~~~~~~~~~i~  267 (373)
                      +.+...++++++||.+|+| .|..+..+++..+. +|++++.+++..+.+++    .|...  ++..      ++   ..
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~------d~---~~  151 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG------DG---SK  151 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CG---GG
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC------Cc---cc
Confidence            4566688999999999998 58889999998874 99999999988777764    34322  2221      11   01


Q ss_pred             HhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          268 EMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       268 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .+..+ .+|+|+.+.........+.+.|+++ |+++..
T Consensus       152 ~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~  188 (235)
T 1jg1_A          152 GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  188 (235)
T ss_dssp             CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             CCCCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEE
Confidence            12223 5999998766555456888999997 988765

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.98  E-value=0.0047  Score=55.28  Aligned_cols=81  Identities=20%  Similarity=0.204  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-...+++.+.+.+...  +.+|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999988999 9999999988766543 34532 2232222111233333333221  37899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|++.|.
T Consensus        84 lv~~Ag~   90 (253)
T 1hxh_A           84 LVNNAGI   90 (253)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998873

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.97  E-value=0.0037  Score=57.88  Aligned_cols=99  Identities=12%  Similarity=0.211  Sum_probs=72.1

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc---eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~---~vi~~~~~~~~~~~~~i  266 (373)
                      +.+...++++++||.+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |..   .++..+      +    
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~----  149 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG------W----  149 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC------G----
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC------h----
Confidence            45556788999999999987 8888888888788 999999999988887653    321   222221      1    


Q ss_pred             HHhcCCCccEEEEC-----CCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .++ ++.+|+|+..     .+.   ...+..+.+.|+++ |+++....
T Consensus       150 ~~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  195 (318)
T 2fk8_A          150 EDF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSS  195 (318)
T ss_dssp             GGC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             HHC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            112 2579999965     332   34678889999997 99887654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.93  E-value=0.0042  Score=56.18  Aligned_cols=104  Identities=12%  Similarity=0.077  Sum_probs=65.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH---HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG---KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~---~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+   ++.|.. ..+.-+-..+.++.+.+.+...  |++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5889999998 8999999999999999 999999887665443   334432 2222221111233333333222  479


Q ss_pred             cEEEECCCCH---------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335          275 DYCFECIGLT---------S---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       275 d~vid~~g~~---------~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |+++++.|..         .               ....+++.|+.++|+++.++.
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS  140 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISS  140 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEee
Confidence            9999998741         1               233455556442399999875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.92  E-value=0.0053  Score=56.38  Aligned_cols=105  Identities=17%  Similarity=0.181  Sum_probs=66.6

Q ss_pred             CCCCEEEEECC-Ch--HHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhc--C
Q 017335          201 EVGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       201 ~~~~~VlI~G~-G~--vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~--~  271 (373)
                      -.++++||+|+ |.  +|.+.++.+...|+ +|++++++++..+.++    +.+....+..+-...+++.+.+.+..  .
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            45789999987 66  99999999999999 8999998865444333    23432333222211122333333222  2


Q ss_pred             CCccEEEECCCCHH-----------------------------HHHHHHHHhccCCceEEEEccc
Q 017335          272 GGADYCFECIGLTS-----------------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       272 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++|++|++.|...                             ....++..++++ |+++.++..
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~  171 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYY  171 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeeh
Confidence            37999999987420                             234455666776 999998753

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.91  E-value=0.0072  Score=53.54  Aligned_cols=80  Identities=13%  Similarity=0.169  Sum_probs=52.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..+..+-....++.+.+.+...  +.+|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            578999998 8999999998889999 99999999888766543 3321 1222221011233333332221  379999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +++.|.
T Consensus        82 vnnAg~   87 (235)
T 3l6e_A           82 LHCAGT   87 (235)
T ss_dssp             EEECCC
T ss_pred             EECCCC
Confidence            998874

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.91  E-value=0.00092  Score=59.11  Aligned_cols=103  Identities=13%  Similarity=0.168  Sum_probs=70.3

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~  268 (373)
                      ......++++||.+|+| .|..+..+++.....+|++++.+++..+.+++    .|..   .++..+.   .+   .+..
T Consensus        48 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~---~~~~  120 (233)
T 2gpy_A           48 HLLKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA---LQ---LGEK  120 (233)
T ss_dssp             HHHHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG---GG---SHHH
T ss_pred             HHHhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH---HH---HHHh
Confidence            33445678999999998 48888899998743399999999998887764    3532   2333222   22   1222


Q ss_pred             hc-CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          269 MT-DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       269 ~~-~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .. ++.||+|+.....   ...+..+.+.|+++ |+++....
T Consensus       121 ~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  161 (233)
T 2gpy_A          121 LELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDNV  161 (233)
T ss_dssp             HTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEETT
T ss_pred             cccCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEcC
Confidence            22 3479999965543   44578889999997 99987643

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.91  E-value=0.0051  Score=55.38  Aligned_cols=80  Identities=15%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC--ceEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--TDFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga--~~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .|+++||+|+ |  ++|++.++.+...|+ +|+.+++++++.+.+.    +++.  .+.+.-+-..++++.+.+.+... 
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5899999997 5  799999999999999 9999999987766553    3442  12222221112333333333222 


Q ss_pred             -CCccEEEECCC
Q 017335          272 -GGADYCFECIG  282 (373)
Q Consensus       272 -~~~d~vid~~g  282 (373)
                       +.+|+++++.|
T Consensus        84 ~G~iD~lvnnAg   95 (256)
T 4fs3_A           84 VGNIDGVYHSIA   95 (256)
T ss_dssp             HCCCSEEEECCC
T ss_pred             hCCCCEEEeccc
Confidence             47999999877

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.90  E-value=0.00095  Score=61.54  Aligned_cols=100  Identities=15%  Similarity=0.227  Sum_probs=73.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i  266 (373)
                      +.+...++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+      +    
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~----  131 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG------W----  131 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC------G----
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC------H----
Confidence            45667789999999999987 8888999998887 99999999998887764    3422   233222      1    


Q ss_pred             HHhcCCCccEEEECCC-----C----------HHHHHHHHHHhccCCceEEEEccc
Q 017335          267 KEMTDGGADYCFECIG-----L----------TSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g-----~----------~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .++ ++.+|+|+....     .          ...+..+.+.|++| |++++....
T Consensus       132 ~~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  185 (302)
T 3hem_A          132 EEF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTIT  185 (302)
T ss_dssp             GGC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEE
T ss_pred             HHc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEe
Confidence            122 458999996422     1          25688899999997 999877653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.90  E-value=0.0068  Score=54.83  Aligned_cols=80  Identities=18%  Similarity=0.238  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-EEcCCCCCCc-cHHHHHHHhcC--CCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDK-TVSQVIKEMTD--GGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~-vi~~~~~~~~-~~~~~i~~~~~--~~~d  275 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... ++..+- .+. ++.+.+.+...  +++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANL-SDRKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCT-TSHHHHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeec-CCHHHHHHHHHHHHHHcCCCC
Confidence            5789999998 8999999999999999 999999998877665 4456432 222222 122 23233332222  3799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++++.|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.89  E-value=0.0051  Score=56.61  Aligned_cols=81  Identities=12%  Similarity=0.238  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |  ++|.+.++.+...|+ +|++++++++..+.++    +.+....+..+-....++.+.+.+...  +
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999998 5  899999998889999 8999999876544443    344333333332112233333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus       108 ~iD~lVnnAG~  118 (296)
T 3k31_A          108 SLDFVVHAVAF  118 (296)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.89  E-value=0.0099  Score=53.43  Aligned_cols=81  Identities=15%  Similarity=0.167  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.. .++..+-....++.+.+.+...  +.
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5789999998 9999999998888999 8999999988766543    23432 2222222111233333333221  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999875

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.89  E-value=0.0018  Score=58.11  Aligned_cols=100  Identities=13%  Similarity=0.140  Sum_probs=70.1

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhc
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++.+||-+|+|. |..+..+++.++ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+....
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~------~d~~~~l~~~~  132 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE------GPALQSLESLG  132 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHTCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHhcC
Confidence            456789999999986 888889998874 3499999999998877764    3533   2222      33444444443


Q ss_pred             CC-CccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          271 DG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~-~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +. .||+|+-....   ...++.+.+.|++| |.++.-..
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          133 ECPAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             SCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             CCCCeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            33 79999933322   34588889999997 99887654

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.88  E-value=0.006  Score=54.83  Aligned_cols=125  Identities=18%  Similarity=0.297  Sum_probs=75.9

Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      ...+.+++++.+.....-....+  ...+ ... ++++++||-+|+|. |..++.+++ .|. +|++++.++...+.+++
T Consensus        88 ~~~~~l~p~~~fgtg~~~tt~~~--~~~l-~~~-~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~  160 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHETTRLA--LKAL-ARH-LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEA  160 (254)
T ss_dssp             SEEEECCCC-----CCSHHHHHH--HHHH-HHH-CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHH
T ss_pred             ceEEEECCCccccCCCCHHHHHH--HHHH-HHh-cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHH
Confidence            34556666665544332221111  1112 222 68899999999977 777777666 577 99999999988877764


Q ss_pred             ----cCCc-eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEccc
Q 017335          246 ----FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       246 ----lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                          .+.. .++.      .++.+.   +..+.+|+|+.....   ...+..+.+.|+++ |++++.+..
T Consensus       161 n~~~~~~~v~~~~------~d~~~~---~~~~~fD~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~  220 (254)
T 2nxc_A          161 NAKRNGVRPRFLE------GSLEAA---LPFGPFDLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             HHHHTTCCCEEEE------SCHHHH---GGGCCEEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             HHHHcCCcEEEEE------CChhhc---CcCCCCCEEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeec
Confidence                3432 2222      233322   223489999965432   23577888899997 999988754

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.88  E-value=0.0046  Score=58.44  Aligned_cols=100  Identities=19%  Similarity=0.154  Sum_probs=66.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCC-----------CCcc-H-HHHHH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC-----------GDKT-V-SQVIK  267 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~-----------~~~~-~-~~~i~  267 (373)
                      -.|++|.|.|.|.+|+.+++.++.+|+ +|++.+.++++.++++++|++.+ +.++.           ...+ + .+.+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence            578999999999999999999999999 99999988777666777776433 11100           0000 0 01111


Q ss_pred             HhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+   ++++|+++.+.+.+.+.+.+.|..+ |.++.-+.
T Consensus       251 ~l---k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~Pd~  285 (355)
T 1c1d_A          251 TL---DCSVVAGAANNVIADEAASDILHAR-GILYAPDF  285 (355)
T ss_dssp             HC---CCSEECCSCTTCBCSHHHHHHHHHT-TCEECCHH
T ss_pred             hC---CCCEEEECCCCCCCCHHHHHHHHhC-CEEEECCe
Confidence            11   5677787777665334566777776 76665443

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.87  E-value=0.0019  Score=56.10  Aligned_cols=101  Identities=16%  Similarity=0.193  Sum_probs=71.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i  266 (373)
                      +.+...++++++||.+|+|. |..+..+++..|. .+|++++.+++..+.+++    .|..  .++..+      ...  
T Consensus        69 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~--  139 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD------GTL--  139 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC------GGG--
T ss_pred             HHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC------ccc--
Confidence            45666789999999999985 8888999998862 299999999988877764    3432  222221      110  


Q ss_pred             HHhc-CCCccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          267 KEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                       ... .+.+|+|+.+.......+.+.+.|+++ |+++..-
T Consensus       140 -~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~  177 (215)
T 2yxe_A          140 -GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPV  177 (215)
T ss_dssp             -CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             -CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEE
Confidence             111 237999998766555457888999997 9987663

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.87  E-value=0.0061  Score=55.53  Aligned_cols=104  Identities=19%  Similarity=0.249  Sum_probs=64.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHH----HHHcCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEI----GKKFGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~----~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++ .+.    +++.|... .+..+-....++.+.+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999998 9999999999999999 89999887643 222    23445332 222221011223333332221  3


Q ss_pred             CccEEEECCCCH----------H---------------HHHHHHHHhccCCceEEEEccc
Q 017335          273 GADYCFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       273 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      ++|++|++.|..          .               ..+.+.+.++.+ |+++.++..
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  165 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  165 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence            799999988731          1               234455566665 999998753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.84  E-value=0.0032  Score=55.52  Aligned_cols=99  Identities=12%  Similarity=0.101  Sum_probs=67.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+...++.+++..+-      .+.+.+.. +++|+||.+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl------~~~~~~~~-~~~D~vi~~   91 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL------EEDFSHAF-ASIDAVVFA   91 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT------TSCCGGGG-TTCSEEEEC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc------HHHHHHHH-cCCCEEEEC
Confidence            4789999998 9999999999999999 9999999999988877766623333332      12222222 279999999


Q ss_pred             CCCHH-------------HHHHHHHHhcc-CCceEEEEcccC
Q 017335          281 IGLTS-------------VMNDAFNSSRE-GWGKTVILGVEM  308 (373)
Q Consensus       281 ~g~~~-------------~~~~~~~~l~~-~~G~~v~~G~~~  308 (373)
                      .|...             ....+++.++. +.++++.++...
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            88421             12233444432 126899887643

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.81  E-value=0.0045  Score=52.89  Aligned_cols=102  Identities=19%  Similarity=0.200  Sum_probs=70.3

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~  267 (373)
                      ....++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|.   -.++..+.   .++    .
T Consensus        16 ~~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----~   87 (197)
T 3eey_A           16 IKMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNM----D   87 (197)
T ss_dssp             HHHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGG----G
T ss_pred             HHhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHH----h
Confidence            345678999999999987 788888888864 2399999999988877754    333   23333322   111    1


Q ss_pred             HhcCCCccEEEECCCC---------------HHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTDGGADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ...++.+|+|+...+-               ...+..+.+.|+++ |+++....
T Consensus        88 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           88 KYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             GTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            1223479999955432               24688999999997 99987743

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.79  E-value=0.011  Score=51.34  Aligned_cols=98  Identities=8%  Similarity=0.055  Sum_probs=62.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHH-HCCCCeEEEEcCChh-HHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          204 STVAIFGL-GAVGLAVAEGAR-LNRASKIIGVDINPE-KFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~-~~G~~~Vi~~~~~~~-~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      ++|||+|+ |.+|...++.+. ..|+ +|++++++++ +.+.+...+. ..++..+- .+.+   .+.+... ++|+||+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~d~~---~~~~~~~-~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSF-QNPG---XLEQAVT-NAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCT-TCHH---HHHHHHT-TCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCC-CCHH---HHHHHHc-CCCEEEE
Confidence            57999998 999999888887 8999 9999999988 6655532222 22332222 1122   2333322 7999999


Q ss_pred             CCCCHHH-HHHHHHHhccC-CceEEEEccc
Q 017335          280 CIGLTSV-MNDAFNSSREG-WGKTVILGVE  307 (373)
Q Consensus       280 ~~g~~~~-~~~~~~~l~~~-~G~~v~~G~~  307 (373)
                      +.|.... ...+++.++.. .++++.++..
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeec
Confidence            9986321 34455555442 2588888753

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.79  E-value=0.011  Score=53.14  Aligned_cols=81  Identities=22%  Similarity=0.317  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .|.. .++..+-....++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4689999998 8999999999999999 99999999877655432    2432 2222221111233333332221  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus        85 id~lv~nAg~   94 (262)
T 1zem_A           85 IDFLFNNAGY   94 (262)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.78  E-value=0.005  Score=55.22  Aligned_cols=80  Identities=20%  Similarity=0.282  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+..+++.. .++..+-...+++.+.+.+...  +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999998 9999999999989999 99999998877444444542 3333222111233333333221  3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.77  E-value=0.0068  Score=53.93  Aligned_cols=81  Identities=20%  Similarity=0.090  Sum_probs=54.6

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      -.++++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +.... ++..+- .+.+-.+.+.+.. +++|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-~~id~   87 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNL-ANKEECSNLISKT-SNLDI   87 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCT-TSHHHHHHHHHTC-SCCSE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCC-CCHHHHHHHHHhc-CCCCE
Confidence            457889999998 9999999999989999 99999999888776643 44322 222221 1233222222222 37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|++.|.
T Consensus        88 li~~Ag~   94 (249)
T 3f9i_A           88 LVCNAGI   94 (249)
T ss_dssp             EEECCC-
T ss_pred             EEECCCC
Confidence            9998883

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.77  E-value=0.0087  Score=53.89  Aligned_cols=104  Identities=21%  Similarity=0.227  Sum_probs=64.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc-----CCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l-----ga~-~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++     +.. ..+..+-...+++.+.+.....  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4689999998 9999999999999999 9999999887755432 22     111 2222222111233333333221  


Q ss_pred             CCccEEEECCCCHH-----------------HHHHHHHHhcc-----CCceEEEEccc
Q 017335          272 GGADYCFECIGLTS-----------------VMNDAFNSSRE-----GWGKTVILGVE  307 (373)
Q Consensus       272 ~~~d~vid~~g~~~-----------------~~~~~~~~l~~-----~~G~~v~~G~~  307 (373)
                      +.+|+++++.|...                 ....+++.++.     . |+++.++..
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~  141 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL  141 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence            37899999987420                 12334455543     4 889988753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.76  E-value=0.0077  Score=53.72  Aligned_cols=81  Identities=25%  Similarity=0.329  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCc-cHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDK-TVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~-~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.......-+..+. ++.+.+.+...  +++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999998 8999999999999999 999999998877665 34554332222221222 23333332221  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        84 lv~nAg~   90 (247)
T 3rwb_A           84 LVNNASI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.75  E-value=0.022  Score=45.35  Aligned_cols=77  Identities=19%  Similarity=0.308  Sum_probs=54.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++ .|.. ++..+.   .+. +.+.+..-.++|+|+.++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~-~~~~d~---~~~-~~l~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC---TKI-KTLEDAGIEDADMYIAVT   77 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT---TSH-HHHHHTTTTTCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcE-EEEcCC---CCH-HHHHHcCcccCCEEEEee
Confidence            3579999999999999999998998 89999999888877664 4653 332222   111 122222123799999999


Q ss_pred             CCHH
Q 017335          282 GLTS  285 (373)
Q Consensus       282 g~~~  285 (373)
                      +...
T Consensus        78 ~~~~   81 (140)
T 1lss_A           78 GKEE   81 (140)
T ss_dssp             SCHH
T ss_pred             CCch
Confidence            9865

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.75  E-value=0.013  Score=52.38  Aligned_cols=42  Identities=14%  Similarity=0.138  Sum_probs=36.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      .+++|||+|+ |++|...+..+...|+ +|+++++++++.+.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~   48 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETV   48 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHH
Confidence            4679999998 9999999998888999 9999999988766543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.75  E-value=0.012  Score=52.65  Aligned_cols=79  Identities=15%  Similarity=0.112  Sum_probs=51.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGGA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~  274 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. .++..+-...+++.+.+.+..  .+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999998 8999999999999999 9999999987765442    22432 222222211122333333221  2379


Q ss_pred             cEEEECCC
Q 017335          275 DYCFECIG  282 (373)
Q Consensus       275 d~vid~~g  282 (373)
                      |++|++.|
T Consensus        81 d~lv~nAg   88 (256)
T 1geg_A           81 DVIVNNAG   88 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.75  E-value=0.0066  Score=54.75  Aligned_cols=79  Identities=16%  Similarity=0.308  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceE-EcCCCCCCc-cHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-INPATCGDK-TVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~v-i~~~~~~~~-~~~~~i~~~~~--~  272 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+.. +..+- .++ ++.+.+.+...  |
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADV-SKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHcC
Confidence            5889999998 8999999999999999 999999999876654    34564332 22221 223 33333332222  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|+++++.|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999887

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.74  E-value=0.007  Score=55.37  Aligned_cols=79  Identities=19%  Similarity=0.172  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. +++..+- .+.+-.+.+.+.. +++|++|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~v~~~~~~~-~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDL-QDLSSVRRFADGV-SGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCT-TCHHHHHHHHHTC-CCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCC-CCHHHHHHHHHhc-CCCCEEE
Confidence            5789999998 9999999999999999 99999999988776643 4432 2222221 1133222322222 4799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        92 ~nAg~   96 (291)
T 3rd5_A           92 NNAGI   96 (291)
T ss_dssp             ECCCC
T ss_pred             ECCcC
Confidence            98873

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.74  E-value=0.0071  Score=54.98  Aligned_cols=99  Identities=12%  Similarity=0.183  Sum_probs=70.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CC---ceEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GI---TDFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga---~~vi~~~~~~~~~~~~~i  266 (373)
                      +.+...++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |.   ..++..+      +    
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d------~----  123 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG------W----  123 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC------G----
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC------h----
Confidence            44556788999999999987 7788888877798 999999999988887652    32   1222221      1    


Q ss_pred             HHhcCCCccEEEEC-----CC---CHHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFEC-----IG---LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~-----~g---~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .++. +.+|+|+..     .+   ....+..+.+.|+++ |+++....
T Consensus       124 ~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          124 EQFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             GGCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hhCC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            1222 579999954     22   134688899999997 99887643

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.74  E-value=0.0071  Score=54.29  Aligned_cols=80  Identities=21%  Similarity=0.261  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----C-CceEEcCCCCCCccHHHHHHHhcCC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----G-ITDFINPATCGDKTVSQVIKEMTDG-  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----g-a~~vi~~~~~~~~~~~~~i~~~~~~-  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +     + .-+++..+-...+++.+.+.+.... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4689999998 9999999998888999 99999999877655422 2     3 1122222221112333333333222 


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|++.|
T Consensus        85 gid~lv~~Ag   94 (260)
T 2z1n_A           85 GADILVYSTG   94 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            4999999887

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.74  E-value=0.0035  Score=53.00  Aligned_cols=99  Identities=16%  Similarity=0.217  Sum_probs=67.4

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHHhc
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++++++||-+|+|. |..+..+++. +. +|+++|.+++..+.+++    .|.+  .++....   .+    +....
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~---~~----l~~~~   86 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGH---EN----LDHYV   86 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG---GG----GGGTC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH---HH----HHhhc
Confidence            45678999999999987 8888888887 66 99999999988877754    3432  3333211   11    11233


Q ss_pred             CCCccEEEECCCC-----------H----HHHHHHHHHhccCCceEEEEcc
Q 017335          271 DGGADYCFECIGL-----------T----SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~~~d~vid~~g~-----------~----~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++.||+|+-..+.           .    ..+..+.+.|++| |+++.+..
T Consensus        87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            3479999855321           1    2357888999997 99987743

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.73  E-value=0.0053  Score=55.00  Aligned_cols=75  Identities=12%  Similarity=-0.040  Sum_probs=50.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH---HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK---KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~---~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.   +.|.+.... +.   .++.+.+.+...  +++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~---~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SE---QEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CC---CSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CH---HHHHHHHHHHHHHhCCCCEE
Confidence            47899998 8999999999999999 9999999887665543   234332221 22   333333333221  379999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998774

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.72  E-value=0.0068  Score=54.37  Aligned_cols=81  Identities=12%  Similarity=0.126  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .+++|||+|+ |++|...++.+.. .|+ +|++++++.++.+.+.    ..+.. +++..+-....++.+.+.+...  +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999998 9999998888877 899 9999999877655432    22422 2332222111233333332221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|.+.|.
T Consensus        82 ~id~li~~Ag~   92 (276)
T 1wma_A           82 GLDVLVNNAGI   92 (276)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.72  E-value=0.0092  Score=54.68  Aligned_cols=102  Identities=18%  Similarity=0.220  Sum_probs=64.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHHH----HHcCCce-EEcCCCCCCc-cHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIG----KKFGITD-FINPATCGDK-TVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~----~~lga~~-vi~~~~~~~~-~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+    ++.|... ++..+- .+. ++.+.+.+...  
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL-SDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHHc
Confidence            5789999998 8999999999999999 89999887653 2222    2344332 222222 122 23333333222  


Q ss_pred             CCccEEEECCCCH-----------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLT-----------S---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+|++|++.|..           .               ..+.++..++.+ |+++.++.
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS  183 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTAS  183 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECC
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEec
Confidence            3799999986631           0               233455566776 99998864

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.70  E-value=0.0039  Score=55.72  Aligned_cols=102  Identities=15%  Similarity=0.120  Sum_probs=72.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc----eEEcCCCCCCccHHHHHHHh
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT----DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~----~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.+...++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++....    .++..+-   .++     ..
T Consensus        47 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~-----~~  116 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSGL-GGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTK-----EF  116 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTC-----CC
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccC-----CC
Confidence            45556788999999999984 8888888887787 999999999999998875422    2232222   111     11


Q ss_pred             cCCCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .++.+|+|+....-        ...+..+.+.|++| |+++....
T Consensus       117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            23489999965321        22577888999997 99887754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.69  E-value=0.013  Score=53.10  Aligned_cols=103  Identities=22%  Similarity=0.349  Sum_probs=64.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++. +++.+.+    ++.|... .+..+-...+++.+.+.+...  +
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 88888544 4444333    3345432 222222111233333333322  3


Q ss_pred             CccEEEECCCCH----------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++|+++++.|..          .               ..+.+.+.++.+ |+++.++.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS  166 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGS  166 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeC
Confidence            799999988741          0               244456667776 99999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.69  E-value=0.0074  Score=53.73  Aligned_cols=80  Identities=19%  Similarity=0.202  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++|+ +.+..+-...+++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4679999998 9999999999999999 9999999988776654 3453 2322222111223333333221  379999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      |++.|.
T Consensus        82 vn~Ag~   87 (245)
T 1uls_A           82 VHYAGI   87 (245)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.69  E-value=0.0071  Score=52.59  Aligned_cols=92  Identities=15%  Similarity=0.185  Sum_probs=62.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|||+|+ |.+|...+..+...|. +|+++++++++...+...+... +..+- .+.+.    ..+  +++|+||.+.|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~D~-~d~~~----~~~--~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVAT-LVKEP-LVLTE----ADL--DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEE-EECCG-GGCCH----HHH--TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceE-Eeccc-ccccH----hhc--ccCCEEEECCcc
Confidence            5899998 9999999999999999 9999999988877664444432 22221 11222    112  379999999986


Q ss_pred             H----------HHHHHHHHHhccCCceEEEEc
Q 017335          284 T----------SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       284 ~----------~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .          .....+++.++..+++++.++
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence            2          124455666655327888885

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.66  E-value=0.0095  Score=55.87  Aligned_cols=129  Identities=15%  Similarity=0.117  Sum_probs=81.5

Q ss_pred             CEEEEECCChHHHHHHHHHH-H-CCCCeE-EEEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEE
Q 017335          204 STVAIFGLGAVGLAVAEGAR-L-NRASKI-IGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF  278 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~-~-~G~~~V-i~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vi  278 (373)
                      -+|.|+|.|.+|...++.++ . .++ ++ .+.++++++.+.+ +++|+..+++       ++.+    +... .+|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~-~~vav~d~~~~~~~~~a~~~g~~~~~~-------~~~~----~l~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGV-KLVAACALDSNQLEWAKNELGVETTYT-------NYKD----MIDTENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSE-EEEEEECSCHHHHHHHHHTTCCSEEES-------CHHH----HHTTSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHhCCCcccC-------CHHH----HhcCCCCCEEE
Confidence            47999999999998888776 4 466 55 4568888877554 5577755542       2322    2233 799999


Q ss_pred             ECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH---Hh---h---CcEEEEeecCCCCchhHHHHHHHHHHc
Q 017335          279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE---IL---K---GRSVCGTYFGGLKPRSDIATLAQKYLD  349 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~---~~---~---~~~i~g~~~~~~~~~~~~~~~~~~~~~  349 (373)
                      .|++.....+.+..+++.  |+-+++..+     +..+..+   +.   .   +..+.-..  .......+..+.+++++
T Consensus        77 i~tp~~~h~~~~~~al~~--G~~v~~eKp-----~~~~~~~~~~l~~~a~~~~~~~~~~~~--~~r~~p~~~~~~~~i~~  147 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNA--GLNVFCEKP-----LGLDFNEVDEMAKVIKSHPNQIFQSGF--MRRYDDSYRYAKKIVDN  147 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHT--TCEEEECSC-----CCSCHHHHHHHHHHHHTCTTSCEECCC--GGGTCHHHHHHHHHHHT
T ss_pred             EeCChHhHHHHHHHHHHC--CCEEEEcCC-----CCCCHHHHHHHHHHHHhCCCCeEEEec--ccccCHHHHHHHHHHHc
Confidence            999987778888888887  454555431     2222222   22   2   33333221  11223568889999999


Q ss_pred             CCCC
Q 017335          350 KVHL  353 (373)
Q Consensus       350 g~i~  353 (373)
                      |+|-
T Consensus       148 g~iG  151 (346)
T 3cea_A          148 GDIG  151 (346)
T ss_dssp             TTTC
T ss_pred             CCCC
Confidence            8774

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.66  E-value=0.006  Score=54.61  Aligned_cols=81  Identities=12%  Similarity=0.160  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----c--C--CceEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--G--ITDFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----l--g--a~~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .  +  ...++..+-...+++.+.+.+... 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4789999998 8999999988888899 99999999887666532    1  2  112222222111233333333222 


Q ss_pred             -CCccEEEECCCC
Q 017335          272 -GGADYCFECIGL  283 (373)
Q Consensus       272 -~~~d~vid~~g~  283 (373)
                       +++|+++++.|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999999884

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.66  E-value=0.0079  Score=55.96  Aligned_cols=80  Identities=15%  Similarity=0.140  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC--c-eEEcCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T-DFINPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga--~-~vi~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.  . .++..+-....++.+.+....  .
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4789999998 8999999999989999 99999999887665432    232  1 222222211223333333332  2


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|++.|
T Consensus        86 g~id~lv~nAg   96 (319)
T 3ioy_A           86 GPVSILCNNAG   96 (319)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999988

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.65  E-value=0.0037  Score=54.85  Aligned_cols=101  Identities=16%  Similarity=0.184  Sum_probs=69.6

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....++++||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+..+
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~------~d~~~~~~~~  137 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL------KPALETLDEL  137 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHHH
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE------cCHHHHHHHH
Confidence            445678899999998 4888889998763 3399999999988877764    3431   2332      2333333333


Q ss_pred             cC----CCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TD----GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~----~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..    +.+|+|+.....   ...+..+.+.|++| |.++....
T Consensus       138 ~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  180 (229)
T 2avd_A          138 LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  180 (229)
T ss_dssp             HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             HhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence            21    479999854333   24588899999997 99887654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.64  E-value=0.0032  Score=56.65  Aligned_cols=88  Identities=19%  Similarity=0.292  Sum_probs=57.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh-------------------hHHHHHH----HcCCc-eE--EcCCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFEIGK----KFGIT-DF--INPAT  256 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~-------------------~~~~~~~----~lga~-~v--i~~~~  256 (373)
                      +.+|+|+|+|++|..+++.+...|++++..++.+.                   .|.+.++    ++... .+  +..+-
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            57899999999999999999999998999999887                   5655543    22221 22  22111


Q ss_pred             CCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhcc
Q 017335          257 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE  296 (373)
Q Consensus       257 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~  296 (373)
                        +.   +.+.+.. .++|+|++|++...+...+.+.+..
T Consensus       111 --~~---~~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~  144 (249)
T 1jw9_B          111 --DD---AELAALI-AEHDLVLDCTDNVAVRNQLNAGCFA  144 (249)
T ss_dssp             --CH---HHHHHHH-HTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred             --CH---hHHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHH
Confidence              11   1222222 2799999999987744444444443

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.62  E-value=0.0081  Score=55.85  Aligned_cols=91  Identities=15%  Similarity=0.216  Sum_probs=63.3

Q ss_pred             CEEEEECCChHHHHHHHHH-H-HCCCCeEEEEcCChhH--HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEE
Q 017335          204 STVAIFGLGAVGLAVAEGA-R-LNRASKIIGVDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF  278 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la-~-~~G~~~Vi~~~~~~~~--~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vi  278 (373)
                      -+|.|+|+|.+|...+..+ + .-+.+-+.++++++++  ++.++++|.....        +..+.+.+.+++ ++|+||
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~--------~~~e~ll~~~~~~~iDvV~   76 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc--------CCHHHHHhccCCCCCcEEE
Confidence            4799999999999888777 4 3466344556767665  5666778864221        123334333333 799999


Q ss_pred             ECCCCHHHHHHHHHHhcc--CCceEEE
Q 017335          279 ECIGLTSVMNDAFNSSRE--GWGKTVI  303 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~--~~G~~v~  303 (373)
                      ++++.....+.+..+++.  | .++++
T Consensus        77 ~atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           77 DATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             ECCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            999977777888888887  7 77776

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.61  E-value=0.016  Score=53.08  Aligned_cols=104  Identities=14%  Similarity=0.162  Sum_probs=64.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHH----HHcCCceEEcCCCCCCcc-HHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG----KKFGITDFINPATCGDKT-VSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~----~~lga~~vi~~~~~~~~~-~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.  ++.+.+    ++.|....+..-+..+.+ +.+.+.+...  
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999998 8999999999999999 899988763  233222    334543332222222232 2222222221  


Q ss_pred             CCccEEEECCCCH--------------------------HHHHHHHHHhccCCceEEEEccc
Q 017335          272 GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       272 ~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++|+++++.|..                          ...+.++..++++ |+++.++..
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~  187 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECCh
Confidence            3799999988731                          0233445566776 999998753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.61  E-value=0.012  Score=53.28  Aligned_cols=105  Identities=20%  Similarity=0.237  Sum_probs=65.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++ ++++.+.+    ++.|... .+..+-...+++.+.+.+...  +
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 8888765 44443332    3345432 222222111233333333322  3


Q ss_pred             CccEEEECCCCH----------H---------------HHHHHHHHhccCCceEEEEcccC
Q 017335          273 GADYCFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       273 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      .+|+++++.|..          .               ....+++.++++ |+++.++...
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            799999988741          1               244566677786 9999998643

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.61  E-value=0.014  Score=52.95  Aligned_cols=103  Identities=19%  Similarity=0.182  Sum_probs=63.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhHHHHH----HHcCCce-EEcCCCCCCccHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEIG----KKFGITD-FINPATCGDKTVS  263 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~~----~~lga~~-vi~~~~~~~~~~~  263 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|++++++            .++.+.+    ++.+... .+..+-....++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            5789999998 8999999999999999 89999876            4443332    2344322 2222211112333


Q ss_pred             HHHHHhcC--CCccEEEECCCCH--------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335          264 QVIKEMTD--GGADYCFECIGLT--------S---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       264 ~~i~~~~~--~~~d~vid~~g~~--------~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+.+...  +++|+++++.|..        .               ..+.++..++.+ |+++.++.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS  154 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEecc
Confidence            33333222  3799999988741        1               223344555676 89998875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.60  E-value=0.021  Score=51.38  Aligned_cols=80  Identities=21%  Similarity=0.273  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC---ceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga---~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++.   -.++..+-....++.+.+.+...  +++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999998 9999999998888999 999999988765544 33432   12232222111233333332221  379


Q ss_pred             cEEEECCC
Q 017335          275 DYCFECIG  282 (373)
Q Consensus       275 d~vid~~g  282 (373)
                      |++|++.|
T Consensus        94 d~li~~Ag  101 (278)
T 2bgk_A           94 DIMFGNVG  101 (278)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.59  E-value=0.0067  Score=55.04  Aligned_cols=80  Identities=18%  Similarity=0.247  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC-c--eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-T--DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga-~--~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|. .  .++..+-....++.+.+.+...  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4689999998 9999999999988999 9999999987765542    2332 1  2222222111233333332221  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|++.|
T Consensus       110 g~iD~vi~~Ag  120 (279)
T 1xg5_A          110 SGVDICINNAG  120 (279)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.58  E-value=0.018  Score=49.66  Aligned_cols=92  Identities=14%  Similarity=0.260  Sum_probs=63.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+. .+.. ++..+- .+.+.    ..+  +++|+||.+.|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~-~~~~D~-~d~~~----~~~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDIN-ILQKDI-FDLTL----SDL--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSE-EEECCG-GGCCH----HHH--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCe-EEeccc-cChhh----hhh--cCCCEEEECCcC
Confidence            6899998 9999999999999998 9999999988876654 3333 332222 11222    122  379999999886


Q ss_pred             H--------HHHHHHHHHhccC-CceEEEEcc
Q 017335          284 T--------SVMNDAFNSSREG-WGKTVILGV  306 (373)
Q Consensus       284 ~--------~~~~~~~~~l~~~-~G~~v~~G~  306 (373)
                      .        .....+++.++.. .++++.++.
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            3        2345666666653 168888764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.57  E-value=0.02  Score=50.46  Aligned_cols=79  Identities=13%  Similarity=0.156  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      ++++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++....++..+- .+.+-.+.+.+ .-+++|++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~-~~~~id~vi~   82 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL-GDWEATERALG-SVGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT-TCHHHHHHHHT-TCCCCCEEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeC-CCHHHHHHHHH-HcCCCCEEEE
Confidence            4789999998 9999999999999999 9999999988766553 332223332222 11222222222 1137999999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        83 ~Ag~   86 (244)
T 3d3w_A           83 NAAV   86 (244)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.57  E-value=0.0094  Score=53.94  Aligned_cols=103  Identities=15%  Similarity=0.206  Sum_probs=63.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++ .+++++.+.+    +..|... .+..+-....++.+.+.+...  +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 8999999988888899 88876 5555544433    2344332 222221111223333332222  3


Q ss_pred             CccEEEECCCCH----------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++|+++++.|..          .               ....+++.++.+ |+++.++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS  162 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMST  162 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeC
Confidence            799999998741          0               234556667776 99999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.57  E-value=0.01  Score=53.74  Aligned_cols=81  Identities=17%  Similarity=0.188  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---C---Cc-eEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G---IT-DFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l---g---a~-~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++   .   .. .++..+-....++.+.+.+... 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4678999998 9999999998888999 9999999988766543 23   2   11 2222221011223333332221 


Q ss_pred             -CCccEEEECCCC
Q 017335          272 -GGADYCFECIGL  283 (373)
Q Consensus       272 -~~~d~vid~~g~  283 (373)
                       +++|++|++.|.
T Consensus        84 ~g~id~lv~~Ag~   96 (278)
T 1spx_A           84 FGKLDILVNNAGA   96 (278)
T ss_dssp             HSCCCEEEECCC-
T ss_pred             cCCCCEEEECCCC
Confidence             379999998874

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.56  E-value=0.003  Score=56.16  Aligned_cols=97  Identities=18%  Similarity=0.184  Sum_probs=67.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-----ceEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-----TDFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-----~~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++...     ..++.      .++......+..+.|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK------GLWEDVAPTLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE------SCHHHHGGGSCTTCE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe------ehHHhhcccccccCC
Confidence            57899999999985 7788888877666 89999999998888876432     12222      223333333334479


Q ss_pred             cEEE-ECCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017335          275 DYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       275 d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      |.|+ |+...          ...+..+.+.|+|| |+++++.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            9885 65432          23467789999997 9998764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.56  E-value=0.0089  Score=54.12  Aligned_cols=80  Identities=16%  Similarity=0.192  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +.....+..+-...+++.+.+.+...  +++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 9999999999999999 99999999887766543 33222332222111223333332221  379999


Q ss_pred             EECCC
Q 017335          278 FECIG  282 (373)
Q Consensus       278 id~~g  282 (373)
                      |++.|
T Consensus        87 v~nAg   91 (270)
T 1yde_A           87 VNNAG   91 (270)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99876

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.55  E-value=0.0089  Score=53.67  Aligned_cols=81  Identities=21%  Similarity=0.249  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhc--CCCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMT--DGGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +++.. ..+..+-...+++.+.+.+..  .+++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999998 9999999999989999 9999999988766653 45532 222222211122333333322  237999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        86 lv~~Ag~   92 (259)
T 4e6p_A           86 LVNNAAL   92 (259)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999884

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.54  E-value=0.0066  Score=54.51  Aligned_cols=80  Identities=16%  Similarity=0.166  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c---CCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l---ga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +.. +.+..+-....++.+.+.+...  ++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 8999999999999999 89999999888766543 2   322 2222222111233333333222  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|+++++.|
T Consensus        84 id~lv~nAg   92 (257)
T 3imf_A           84 IDILINNAA   92 (257)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.54  E-value=0.013  Score=53.77  Aligned_cols=80  Identities=20%  Similarity=0.237  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC---c-eEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI---T-DFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga---~-~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.   . .++..+-....++.+.+.+... 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4689999998 9999999999989999 9999999987765542    2232   2 2222222111223333332221 


Q ss_pred             -CCccEEEECCC
Q 017335          272 -GGADYCFECIG  282 (373)
Q Consensus       272 -~~~d~vid~~g  282 (373)
                       +++|++|++.|
T Consensus       104 ~g~iD~lvnnAG  115 (297)
T 1xhl_A          104 FGKIDILVNNAG  115 (297)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999887

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.54  E-value=0.013  Score=52.54  Aligned_cols=103  Identities=18%  Similarity=0.193  Sum_probs=62.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++ .+++++.+.+    ++.|.. ..+..+-....++.+.+.+...  +
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4789999998 8999999999999999 88887 5555544433    233432 2222222111223333333222  3


Q ss_pred             CccEEEECCCCH-----------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLT-----------S---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++|+++++.|..           .               ..+.++..++++ |+++.++.
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS  144 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG-GAIVTFSS  144 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence            799999987632           0               223344455666 89998875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.54  E-value=0.019  Score=54.37  Aligned_cols=92  Identities=16%  Similarity=0.141  Sum_probs=66.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      +|+|+|+|.+|..+++.+.. .. .|.+.+++.++.+.+++......+|..+   .   +.+.++.. ++|+|++|++..
T Consensus        18 kilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d---~---~~l~~~~~-~~DvVi~~~p~~   88 (365)
T 3abi_A           18 KVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN---F---DKLVEVMK-EFELVIGALPGF   88 (365)
T ss_dssp             EEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC---H---HHHHHHHT-TCSEEEECCCGG
T ss_pred             EEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC---H---HHHHHHHh-CCCEEEEecCCc
Confidence            79999999999998887754 35 8999999999988887654333344433   2   23444332 789999999976


Q ss_pred             HHHHHHHHHhccCCceEEEEcc
Q 017335          285 SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       285 ~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .....+-.++..+ -.++++..
T Consensus        89 ~~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           89 LGFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             GHHHHHHHHHHHT-CEEEECCC
T ss_pred             ccchHHHHHHhcC-cceEeeec
Confidence            5566677777886 88888764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.53  E-value=0.012  Score=53.94  Aligned_cols=97  Identities=14%  Similarity=0.071  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC----ceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI----TDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga----~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      -.+++++|+|+|++|.+++..+...|+++|+++.++.++.+.+ ++++.    ..+.....   +++.+.+.     .+|
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~-----~~D  196 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIA-----AAD  196 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHH-----HSS
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHh-----cCC
Confidence            4688999999999999999999999997899999999887654 33321    11211111   23433332     589


Q ss_pred             EEEECCCCHHH----HHHHHHHhccCCceEEEEcc
Q 017335          276 YCFECIGLTSV----MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g~~~~----~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +||+|++....    .......++++ ..++++-.
T Consensus       197 iVInaTp~Gm~~~~~~pi~~~~l~~~-~~v~DlvY  230 (283)
T 3jyo_A          197 GVVNATPMGMPAHPGTAFDVSCLTKD-HWVGDVVY  230 (283)
T ss_dssp             EEEECSSTTSTTSCSCSSCGGGCCTT-CEEEECCC
T ss_pred             EEEECCCCCCCCCCCCCCCHHHhCCC-CEEEEecC
Confidence            99999874220    01123456775 66677644

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.52  E-value=0.01  Score=53.29  Aligned_cols=81  Identities=25%  Similarity=0.367  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l----ga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++    +.. .++..+-...+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999998 9999999999999999 9999999987765442 22    432 2222222111233333332221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        85 ~id~lv~~Ag~   95 (263)
T 3ai3_A           85 GADILVNNAGT   95 (263)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.51  E-value=0.01  Score=53.51  Aligned_cols=80  Identities=24%  Similarity=0.238  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +     +.. ..+..+-...+++.+.+.+...  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999998 9999999998888999 99999999877655422 1     432 2222221111233333333221  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|++.|
T Consensus        91 g~id~lv~nAg  101 (267)
T 1iy8_A           91 GRIDGFFNNAG  101 (267)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999877

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.50  E-value=0.0084  Score=53.67  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-...+++.+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999999999999 9999999988766553 34422 2222221111233333333222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|++.|.
T Consensus        83 lv~nAg~   89 (254)
T 1hdc_A           83 LVNNAGI   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.50  E-value=0.011  Score=52.91  Aligned_cols=80  Identities=19%  Similarity=0.194  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-....++.+.+.+...  +++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4689999998 8999999999999999 8999999998877654 45532 2222222111233333333222  37999


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      +|++.|
T Consensus        87 li~~Ag   92 (261)
T 3n74_A           87 LVNNAG   92 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999877

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.50  E-value=0.0069  Score=54.55  Aligned_cols=81  Identities=14%  Similarity=0.167  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcC-Cc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG-IT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lg-a~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+ .. ..+..+-....++.+.+.+...  +
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4789999998 8999999999999999 9999999988766543    233 11 2222222111223333332222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        88 ~id~lvnnAg~   98 (262)
T 3pk0_A           88 GIDVVCANAGV   98 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.50  E-value=0.011  Score=52.64  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. ..+..+-....++.+.+.+...  ++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 8999999999999999 9999999987765543    22432 2222222111233333332221  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|+++++.|
T Consensus        85 id~lv~nAg   93 (247)
T 2jah_A           85 LDILVNNAG   93 (247)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.49  E-value=0.0097  Score=54.11  Aligned_cols=81  Identities=20%  Similarity=0.213  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. ..+..+-....++.+.+.+...  ++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 8999999999999999 9999999887765543    23422 2232222111233333333222  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.48  E-value=0.013  Score=53.42  Aligned_cols=92  Identities=9%  Similarity=-0.029  Sum_probs=63.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC--ceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga--~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .+++++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+ ++++.  ..++...     +       +....+|+||
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~-----~-------l~~~~~DivI  186 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE-----A-------LEGQSFDIVV  186 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG-----G-------GTTCCCSEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH-----H-------hcccCCCEEE
Confidence            588999999999999999999999977999999999887665 44543  2233221     1       1114799999


Q ss_pred             ECCCCHHHH---HHHHHHhccCCceEEEEcc
Q 017335          279 ECIGLTSVM---NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       279 d~~g~~~~~---~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|++....-   ..-...++++ ..++++-.
T Consensus       187 naTp~gm~~~~~~i~~~~l~~~-~~V~DlvY  216 (272)
T 3pwz_A          187 NATSASLTADLPPLPADVLGEA-ALAYELAY  216 (272)
T ss_dssp             ECSSGGGGTCCCCCCGGGGTTC-SEEEESSC
T ss_pred             ECCCCCCCCCCCCCCHHHhCcC-CEEEEeec
Confidence            998754210   0112457775 77777754

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.48  E-value=0.0014  Score=58.49  Aligned_cols=100  Identities=19%  Similarity=0.241  Sum_probs=71.1

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i  266 (373)
                      +.....++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+.   .++    
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~----   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGY----   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTC----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---HhC----
Confidence            45667789999999999987 8888899988888 99999999988777754    3421   2332222   111    


Q ss_pred             HHhcCCCccEEEEC-----C-CCHHHHHHHHHHhccCCceEEEEc
Q 017335          267 KEMTDGGADYCFEC-----I-GLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~~~~~~~d~vid~-----~-g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                        ..++.||+|+..     . .....+..+.+.|++| |+++...
T Consensus        99 --~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             --CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence              013479999952     1 2345688899999997 9988754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.48  E-value=0.01  Score=52.10  Aligned_cols=78  Identities=12%  Similarity=0.064  Sum_probs=51.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      ++|||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ ++.. ..+..+- .+.+-.+.+.+.....+|+++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDL-ASHQEVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCT-TCHHHHHHHHHSCSSCCSEEEEC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecC-CCHHHHHHHHHHHhhcCCEEEEe
Confidence            36899998 8999999999999999 89999999988777654 4321 1221121 11333333333333346999998


Q ss_pred             CCC
Q 017335          281 IGL  283 (373)
Q Consensus       281 ~g~  283 (373)
                      .|.
T Consensus        80 Ag~   82 (230)
T 3guy_A           80 AGS   82 (230)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            873

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.48  E-value=0.012  Score=52.14  Aligned_cols=76  Identities=16%  Similarity=0.232  Sum_probs=51.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCFE  279 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vid  279 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++  ..+++|+. .+..+- .+.++.+.+.+...  +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~-~~~~D~-~~~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAV-PLPTDL-EKDDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCE-EEECCT-TTSCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcE-EEecCC-chHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999998 9999999999999999 99999998776  33445632 222221 11333333333221  37999999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8873

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.47  E-value=0.0098  Score=53.58  Aligned_cols=102  Identities=12%  Similarity=0.174  Sum_probs=61.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh---HHHHH----HHcCCce-EEcCCCCCCc-cHHHHHHHhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG----KKFGITD-FINPATCGDK-TVSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~----~~lga~~-vi~~~~~~~~-~~~~~i~~~~~  271 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+.+++...   +.+.+    ++.|... .+..+- .+. ++.+.+.+...
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL-SNEEEVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCC-CSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHH
Confidence            4789999998 8999999999999999 8999876543   33222    2224322 222221 122 23333332222


Q ss_pred             --CCccEEEECCCC----------HH---------------HHHHHHHHhccCCceEEEEcc
Q 017335          272 --GGADYCFECIGL----------TS---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 --~~~d~vid~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                        +++|+++++.|.          ..               ..+.++..++.+ |+++.++.
T Consensus        88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~isS  148 (262)
T 3ksu_A           88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPN-GHIITIAT  148 (262)
T ss_dssp             HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEE-EEEEEECC
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCC-CEEEEEec
Confidence              379999999883          11               223344455676 99998865

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.47  E-value=0.01  Score=54.10  Aligned_cols=81  Identities=12%  Similarity=0.170  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c---CCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l---ga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ +   |... .+..+-....++.+.+.+...  ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999998 8999999999999999 99999999887665532 2   3222 222222111233333333222  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.46  E-value=0.014  Score=52.14  Aligned_cols=80  Identities=19%  Similarity=0.187  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+    ++.+.. .++..+-....++.+.+.+...  +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4679999998 9999999998888999 8999998 76655443    223432 2222222111223333333221  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|++.|
T Consensus        85 ~id~li~~Ag   94 (261)
T 1gee_A           85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999877

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.46  E-value=0.0085  Score=55.37  Aligned_cols=101  Identities=15%  Similarity=0.218  Sum_probs=70.7

Q ss_pred             HHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHH
Q 017335          195 WKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  266 (373)
Q Consensus       195 ~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i  266 (373)
                      .+... ++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-   .++    
T Consensus       109 ~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----  179 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDT----  179 (312)
T ss_dssp             HTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcC----
Confidence            34444 78899999999976 7788888887787 99999999988877764    3422   2333222   111    


Q ss_pred             HHhcCCCccEEEEC-----CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFEC-----IGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ...++.||+|+..     .+....+..+.+.|++| |+++....
T Consensus       180 -~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          180 -PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             -CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence             1123489999853     33355688999999997 99987754

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.46  E-value=0.012  Score=53.62  Aligned_cols=81  Identities=19%  Similarity=0.190  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce-EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++... .+..+-....++.+.+.+...  +++|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999998 8999999999999999 9999999988776653 355432 222221111233333333222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|++.|.
T Consensus       105 lv~nAg~  111 (277)
T 4dqx_A          105 LVNNAGF  111 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.45  E-value=0.0099  Score=52.97  Aligned_cols=81  Identities=23%  Similarity=0.252  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.. .++..+-...+++.+.+.+...  ++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999999999 89999999887665532    2432 2222222111223233322221  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999998874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.45  E-value=0.0099  Score=52.25  Aligned_cols=79  Identities=11%  Similarity=0.068  Sum_probs=52.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      +++|||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ ++..+++..+-...+++.+.+.+...  +++|++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999998 9999999999989999 99999999887765543 43223332222111233333332221  3799999


Q ss_pred             ECCC
Q 017335          279 ECIG  282 (373)
Q Consensus       279 d~~g  282 (373)
                      ++.|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.45  E-value=0.0079  Score=53.51  Aligned_cols=79  Identities=20%  Similarity=0.186  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.++.....+..+- .+.+-.+.+.+.. +++|++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDV-TKKKQIDQFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCT-TCHHHHHHHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeC-CCHHHHHHHHHHh-CCCCEEEEC
Confidence            4689999998 9999999999999999 9999999987765544332112222221 1133333333222 479999998


Q ss_pred             CCC
Q 017335          281 IGL  283 (373)
Q Consensus       281 ~g~  283 (373)
                      .|.
T Consensus        82 Ag~   84 (246)
T 2ag5_A           82 AGF   84 (246)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.44  E-value=0.0097  Score=53.66  Aligned_cols=80  Identities=18%  Similarity=0.186  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..+..+-...+++.+.+.+...  +.+|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            4689999998 8999999999999999 99999999887766543 4322 2222221011223333333221  37899


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      +|++.|
T Consensus        84 lvnnAg   89 (263)
T 2a4k_A           84 VAHFAG   89 (263)
T ss_dssp             EEEGGG
T ss_pred             EEECCC
Confidence            999877

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.43  E-value=0.033  Score=50.65  Aligned_cols=82  Identities=15%  Similarity=0.202  Sum_probs=52.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhcC--
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      -.++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+    +..|... .+..+-...+++.+.+.+...  
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999998 8999999999999999 8999885 55554433    2334322 222222112334333333322  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|++|++.|.
T Consensus       106 g~iD~lvnnAg~  117 (280)
T 4da9_A          106 GRIDCLVNNAGI  117 (280)
T ss_dssp             SCCCEEEEECC-
T ss_pred             CCCCEEEECCCc
Confidence            379999998875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.42  E-value=0.0086  Score=54.37  Aligned_cols=81  Identities=15%  Similarity=0.127  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-....++.+.+.+...  +++|+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999998 8999999999999999 9999999988776653 45422 2222222111233333332222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998874

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.42  E-value=0.0046  Score=54.33  Aligned_cols=95  Identities=15%  Similarity=0.178  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC------CeEEEEcCChhHHHHHHHc----C-------CceEEcCCCCCCcc
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRA------SKIIGVDINPEKFEIGKKF----G-------ITDFINPATCGDKT  261 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~------~~Vi~~~~~~~~~~~~~~l----g-------a~~vi~~~~~~~~~  261 (373)
                      .++++++||.+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +       .-.++..+.     
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-----  154 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG-----  154 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG-----
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc-----
Confidence            478999999999987 8888888887662      3899999999887777542    2       122332221     


Q ss_pred             HHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          262 VSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       262 ~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       .+   .+.. +.||+|+...........+.+.|+++ |+++..
T Consensus       155 -~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~  193 (227)
T 1r18_A          155 -RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  193 (227)
T ss_dssp             -GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             -cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence             11   1222 47999998776655568899999997 998765

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.42  E-value=0.012  Score=52.57  Aligned_cols=97  Identities=16%  Similarity=0.182  Sum_probs=63.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      -+++|||+|+ |++|.+.++.+...|+ +|+++++++++...     ....++-.+  ..++.+.+.+...  +.+|++|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d--~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG--EEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS--HHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            3689999998 8999999999999999 89999998765421     111122121  1333344444433  3799999


Q ss_pred             ECCCCH-------H-------------------HHHHHHHHhccCCceEEEEccc
Q 017335          279 ECIGLT-------S-------------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       279 d~~g~~-------~-------------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      ++.|..       .                   ....+...++++ |+++.++..
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  146 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS  146 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence            998730       0                   233455566776 999998753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.41  E-value=0.0072  Score=55.57  Aligned_cols=81  Identities=14%  Similarity=0.169  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---C--CceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G--ITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l---g--a~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++   +  .-..+..+-...+++.+.+.+...  +
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 9999999987765543 22   3  112222222111223333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus       119 ~iD~lvnnAg~  129 (293)
T 3rih_A          119 ALDVVCANAGI  129 (293)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.41  E-value=0.01  Score=54.02  Aligned_cols=81  Identities=15%  Similarity=0.132  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++... .+..+-....++.+.+.+...  +++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4789999998 8999999999999999 99999999888776543 44322 222222111233333333221  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        83 lvnnAg~   89 (281)
T 3zv4_A           83 LIPNAGI   89 (281)
T ss_dssp             EECCCCC
T ss_pred             EEECCCc
Confidence            9998873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.41  E-value=0.012  Score=51.49  Aligned_cols=101  Identities=17%  Similarity=0.060  Sum_probs=69.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-----CCeEEEEcCChhHHHHHHH----cC-----C--ceEEcCCCCCCccH
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNR-----ASKIIGVDINPEKFEIGKK----FG-----I--TDFINPATCGDKTV  262 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G-----~~~Vi~~~~~~~~~~~~~~----lg-----a--~~vi~~~~~~~~~~  262 (373)
                      .++++++||.+|+|. |..+..+++..+     ..+|++++.+++..+.+++    .+     .  -.++..+.  ...+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~~  153 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI--YQVN  153 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG--GGCC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh--Hhcc
Confidence            588999999999987 888889999876     1299999999988877754    23     1  22333222  0111


Q ss_pred             HHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          263 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       263 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .+..  ...+.||+|+........+..+.+.|+++ |+++..-
T Consensus       154 ~~~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  193 (227)
T 2pbf_A          154 EEEK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI  193 (227)
T ss_dssp             HHHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred             cccC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            0000  11237999997776656578899999997 9987664

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.41  E-value=0.013  Score=53.29  Aligned_cols=80  Identities=13%  Similarity=0.146  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. .++..+-...+++.+.+.+..  -++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4689999998 9999999999999999 9999999987765432    23432 222222211122333333221  237


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus       100 iD~lv~~Ag  108 (277)
T 2rhc_B          100 VDVLVNNAG  108 (277)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.41  E-value=0.011  Score=53.64  Aligned_cols=79  Identities=14%  Similarity=0.183  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---CCceEEcCCCCCCc-cHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GITDFINPATCGDK-TVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l---ga~~vi~~~~~~~~-~~~~~i~~~~--~~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++   |.-.++..+- .+. ++.+.+.+..  .++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADL-SSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCT-TSHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeC-CCHHHHHHHHHHHHHhcCC
Confidence            4689999998 8999999999999999 9999999987765543 23   2112222221 122 2222233221  237


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.40  E-value=0.014  Score=52.33  Aligned_cols=80  Identities=16%  Similarity=0.169  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC-ceEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga-~~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +.. ...+..+-....++.+.+.+...  +++|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999998 9999999999999999 99999999887766543 321 12222221111233333332221  37999


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      +|++.|
T Consensus        90 lv~~Ag   95 (263)
T 3ak4_A           90 LCANAG   95 (263)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.40  E-value=0.032  Score=51.33  Aligned_cols=46  Identities=26%  Similarity=0.343  Sum_probs=41.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+..
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~   53 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACG   53 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSE
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCcc
Confidence            579999999999999998889999 9999999999999988878654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.40  E-value=0.013  Score=53.16  Aligned_cols=87  Identities=11%  Similarity=0.091  Sum_probs=64.0

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +++++|+|+|++|.+++..+...|. +|+++.|+.++.+.+.++|.. +...++            +.  .+|+||+|++
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~------------l~--~~DiVInaTp  181 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP------------KS--AFDLIINATS  181 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC------------SS--CCSEEEECCT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH------------hc--cCCEEEEccc
Confidence            8899999999999999999999995 999999999987766577743 333222            11  7999999987


Q ss_pred             CH-----H-HHHHHHHHhccCCceEEEEcc
Q 017335          283 LT-----S-VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       283 ~~-----~-~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..     . ..+.+...++++ ..++++-.
T Consensus       182 ~Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY  210 (269)
T 3phh_A          182 ASLHNELPLNKEVLKGYFKEG-KLAYDLAY  210 (269)
T ss_dssp             TCCCCSCSSCHHHHHHHHHHC-SEEEESCC
T ss_pred             CCCCCCCCCChHHHHhhCCCC-CEEEEeCC
Confidence            43     1 112223367786 88888854

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.40  E-value=0.01  Score=58.55  Aligned_cols=92  Identities=21%  Similarity=0.224  Sum_probs=69.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .-.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. +.        ++    .+.. ...|+|+.
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~-~~--------~l----~ell-~~aDiVi~  338 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYR-VV--------TM----EYAA-DKADIFVT  338 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCE-EC--------CH----HHHT-TTCSEEEE
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCE-eC--------CH----HHHH-hcCCEEEE
Confidence            3578999999999999999999999999 999999998775444455653 21        22    2222 26899999


Q ss_pred             CCCCHHHH-HHHHHHhccCCceEEEEccc
Q 017335          280 CIGLTSVM-NDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       280 ~~g~~~~~-~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++....+ ...+..|+++ ..++.+|..
T Consensus       339 ~~~t~~lI~~~~l~~MK~g-AilINvgrg  366 (494)
T 3d64_A          339 ATGNYHVINHDHMKAMRHN-AIVCNIGHF  366 (494)
T ss_dssp             CSSSSCSBCHHHHHHCCTT-EEEEECSSS
T ss_pred             CCCcccccCHHHHhhCCCC-cEEEEcCCC
Confidence            98654434 4677899997 999999864

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.40  E-value=0.016  Score=49.95  Aligned_cols=97  Identities=14%  Similarity=0.134  Sum_probs=69.6

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ..+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+..  .++..+-   .++      ..++.+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~~------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FDW------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT---TSC------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc---ccC------CCCCcee
Confidence            3478889999999976 7777777777 77 999999999999999886632  2232222   111      2234899


Q ss_pred             EEEECCC-----C---HHHHHHHHHHhccCCceEEEEccc
Q 017335          276 YCFECIG-----L---TSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       276 ~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +|+....     .   ...+..+.+.|+++ |+++.....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            9996432     1   34578889999997 999887653

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.40  E-value=0.019  Score=53.14  Aligned_cols=88  Identities=19%  Similarity=0.254  Sum_probs=65.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.+.|+..+         ++.+.+.     ..|+|+.++
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell~-----~aDvV~l~~  204 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV---------DLETLLK-----ESDVVTIHV  204 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc---------CHHHHHh-----hCCEEEEec
Confidence            57899999999999999999999999 99999998877 55667776421         1222221     578999887


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....    .+ ...+..++++ +.++.++.
T Consensus       205 p~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          205 PLVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CCSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CCChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            7432    12 3567788996 88888865

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.40  E-value=0.026  Score=54.32  Aligned_cols=109  Identities=14%  Similarity=0.120  Sum_probs=71.5

Q ss_pred             HHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----------cCC--c--eEEcCC
Q 017335          191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----------FGI--T--DFINPA  255 (373)
Q Consensus       191 ~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----------lga--~--~vi~~~  255 (373)
                      +..++....++++++||=+|+|. |..++++|+..|+.+|++++.+++..+.+++           .|.  .  .++..+
T Consensus       162 i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD  240 (438)
T 3uwp_A          162 VAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD  240 (438)
T ss_dssp             HHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred             HHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence            33467788999999999999986 8888899988898679999999865554432           342  2  234333


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEE-CC-CC---HHHHHHHHHHhccCCceEEEEccc
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFE-CI-GL---TSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid-~~-g~---~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      - .+..+...   +  ..+|+|+- +. -.   ...+...++.|++| |+++..-..
T Consensus       241 ~-~~lp~~d~---~--~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f  290 (438)
T 3uwp_A          241 F-LSEEWRER---I--ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF  290 (438)
T ss_dssp             T-TSHHHHHH---H--HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred             c-cCCccccc---c--CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence            2 11222111   1  26899984 22 11   22456678889997 999987543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.39  E-value=0.012  Score=54.16  Aligned_cols=81  Identities=20%  Similarity=0.254  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.. .++..+-....++.+.+.+...  ++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            5789999998 8999999999999999 9999999988766543    23432 2222222111223333333221  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999883

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.39  E-value=0.0081  Score=54.35  Aligned_cols=79  Identities=20%  Similarity=0.260  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-E--EcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-F--INPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-v--i~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|... .  .|-.+  ..++.+.+.+...  
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999998 8999999999999999 9999999988766543    234322 2  22222  1223333332222  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++++.|.
T Consensus        80 g~iD~lVnnAG~   91 (264)
T 3tfo_A           80 GRIDVLVNNAGV   91 (264)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.39  E-value=0.011  Score=52.40  Aligned_cols=81  Identities=14%  Similarity=0.163  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC--ceEE--cCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--TDFI--NPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga--~~vi--~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.  ..++  +-+.....++.+.+.+... 
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999998 8999999999999999 9999999988766543    2331  1222  2211111223333332221 


Q ss_pred             -CCccEEEECCCC
Q 017335          272 -GGADYCFECIGL  283 (373)
Q Consensus       272 -~~~d~vid~~g~  283 (373)
                       +++|++|++.|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence             379999998874

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.39  E-value=0.0029  Score=58.93  Aligned_cols=101  Identities=23%  Similarity=0.326  Sum_probs=70.2

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i  266 (373)
                      +.+...++++++||.+|+|. |..+..+++..+. .+|++++.+++..+.+++    .|..  .++..+-   .+.   .
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~---~~~---~  139 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG---YYG---V  139 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGC---C
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECCh---hhc---c
Confidence            45667889999999999987 8888888887542 379999999998887764    3432  2232221   110   0


Q ss_pred             HHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                        ...+.+|+|+...........+.+.|+++ |+++..
T Consensus       140 --~~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~  174 (317)
T 1dl5_A          140 --PEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (317)
T ss_dssp             --GGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             --ccCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEE
Confidence              01247999997765444446788999997 998776

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.38  E-value=0.021  Score=50.37  Aligned_cols=78  Identities=14%  Similarity=0.099  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ ....+++..+- .+.+-.+.+.+ ..+++|++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~-~~~~id~vi~   82 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDL-GDWDATEKALG-GIGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT-TCHHHHHHHHT-TCCCCSEEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecC-CCHHHHHHHHH-HcCCCCEEEE
Confidence            4679999998 9999999999999999 99999999877665543 32223332222 11222222222 1136899999


Q ss_pred             CCC
Q 017335          280 CIG  282 (373)
Q Consensus       280 ~~g  282 (373)
                      +.|
T Consensus        83 ~Ag   85 (244)
T 1cyd_A           83 NAA   85 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.38  E-value=0.015  Score=51.88  Aligned_cols=81  Identities=21%  Similarity=0.226  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHH-HHHHcCCce-EEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE-IGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~-~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d  275 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++ ++.+ .+++.|... .+..+-...+++.+.+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999998 8999999999999999 999999887 5544 344555322 222221011223333332221  3799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      ++|++.|.
T Consensus        85 ~lv~nAg~   92 (249)
T 2ew8_A           85 ILVNNAGI   92 (249)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.37  E-value=0.036  Score=50.51  Aligned_cols=86  Identities=20%  Similarity=0.237  Sum_probs=59.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+...        .+..+.+.     ..|+||.|+..
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDvvi~~vp~   67 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA--------ATPCEVVE-----SCPVTFAMLAD   67 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEEcCC
Confidence            478999999999999999999998 99999999999888877765311        12222222     36777777775


Q ss_pred             HHHHHHHH-------HHhccCCceEEEE
Q 017335          284 TSVMNDAF-------NSSREGWGKTVIL  304 (373)
Q Consensus       284 ~~~~~~~~-------~~l~~~~G~~v~~  304 (373)
                      +..+...+       ..++++ ..++..
T Consensus        68 ~~~~~~v~~~~~~l~~~l~~~-~~vi~~   94 (287)
T 3pef_A           68 PAAAEEVCFGKHGVLEGIGEG-RGYVDM   94 (287)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTT-CEEEEC
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEeC
Confidence            43344333       445564 555554

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.37  E-value=0.024  Score=50.53  Aligned_cols=82  Identities=13%  Similarity=0.174  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHHHHc--CCc-eEEcCCCCCC-ccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIGKKF--GIT-DFINPATCGD-KTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~~~l--ga~-~vi~~~~~~~-~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|++.|+++++++  +..+.+++.  +.. +++..+-... .++.+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4689999998 99999999999999994488888876  334444333  221 2222222112 233333333221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.36  E-value=0.011  Score=53.54  Aligned_cols=81  Identities=16%  Similarity=0.155  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... .+..+-....++.+.+.+...  +++|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999998 8999999999999999 999999998876655 3455322 222221011223333332222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        89 lv~nAg~   95 (271)
T 3tzq_B           89 VDNNAAH   95 (271)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998774

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.36  E-value=0.013  Score=52.71  Aligned_cols=82  Identities=18%  Similarity=0.173  Sum_probs=54.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhc--CC
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      -.++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.    +.|... .+..+-...+++.+.+.+..  .+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999998 8999999999999999 9999999988766543    234322 22222211122333333322  23


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            79999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.36  E-value=0.0092  Score=54.42  Aligned_cols=81  Identities=11%  Similarity=0.115  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c---CC-c-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GI-T-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l---ga-~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +. . ..+..+-...+++.+.+.+...  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999989999 99999999887665432 2   21 1 2332222111233333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|+++++.|.
T Consensus       111 ~iD~lvnnAG~  121 (281)
T 4dry_A          111 RLDLLVNNAGS  121 (281)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.36  E-value=0.012  Score=53.63  Aligned_cols=80  Identities=20%  Similarity=0.221  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c---CCceEEcCCCCCCcc-HHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKT-VSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l---ga~~vi~~~~~~~~~-~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +....+..-+..+.+ +.+.+.+...  ++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999999999999 89999999887666532 2   332222221212232 2222222221  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus        86 iD~lvnnAg   94 (280)
T 3tox_A           86 LDTAFNNAG   94 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.35  E-value=0.016  Score=51.20  Aligned_cols=95  Identities=16%  Similarity=0.130  Sum_probs=67.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.  ..++.      .+..+.+....++.||+|+.
T Consensus        39 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~------~d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           39 FKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK------SDAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             TTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC------SCHHHHHHTSCTTCBSEEEE
T ss_pred             hcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee------ccHHHHhhhcCCCCeeEEEE
Confidence            67889999999875 5566666665 87 899999999998888765  23332      23333333344458999995


Q ss_pred             CC-----CC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          280 CI-----GL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       280 ~~-----g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..     ..   ...+..+.+.|+++ |+++..-.
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            32     22   35688899999997 99887543

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.35  E-value=0.011  Score=49.73  Aligned_cols=99  Identities=15%  Similarity=0.219  Sum_probs=69.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-c--eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~--~vi~~~~~~~~~~~~~i  266 (373)
                      +.....+.++++||.+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. .  .++.      .++.+. 
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~------~d~~~~-   94 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEA-   94 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHH-
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe------cCHHHh-
Confidence            44556789999999999987 88888888766 4 99999999988887764    343 1  2222      233332 


Q ss_pred             HHhcC-CCccEEEECCC---CHHHHHHHHHHhccCCceEEEEc
Q 017335          267 KEMTD-GGADYCFECIG---LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~~~~-~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                        +.. +.+|+|+....   ....+..+.+.|+++ |+++...
T Consensus        95 --~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           95 --LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             --HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             --cccCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence              222 37999996543   244578888999997 9988764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.34  E-value=0.016  Score=52.40  Aligned_cols=81  Identities=16%  Similarity=0.301  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-----HcCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----KFGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.     ..|... .+..+-...+++.+.+.+...  +
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999998 9999999999999999 9999999987765432     225332 222221111233333332221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999998873

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.34  E-value=0.021  Score=51.07  Aligned_cols=99  Identities=22%  Similarity=0.299  Sum_probs=67.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...++++||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|..   .++..      +..+.+..+
T Consensus        76 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g------da~~~l~~l  147 (247)
T 1sui_A           76 KLINAKNTMEIGVYT-GYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFREG------PALPVLDEM  147 (247)
T ss_dssp             HHTTCCEEEEECCGG-GHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES------CHHHHHHHH
T ss_pred             HhhCcCEEEEeCCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC------CHHHHHHHH
Confidence            345678999999876 78888888886  45 99999999988877754    4532   23322      233333333


Q ss_pred             c-----CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 T-----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~-----~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .     .+.||+||-....   ...+..+.+.|++| |.++.-..
T Consensus       148 ~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~~  191 (247)
T 1sui_A          148 IKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNT  191 (247)
T ss_dssp             HHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEECT
T ss_pred             HhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEecC
Confidence            1     3479999943322   34578899999997 99886543

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.34  E-value=0.0077  Score=53.24  Aligned_cols=103  Identities=22%  Similarity=0.213  Sum_probs=68.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC--
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      ...++++||-+|+| .|..++.+++.++ -.+|++++.+++..+.+++    .|....+....   .+..+.+.++..  
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~l~~l~~~~  144 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL---GPALATLEQLTQGK  144 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHHHHHHTSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhcC
Confidence            34567899999998 4888899998874 2299999999988877754    35421111111   234343444421  


Q ss_pred             --CCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          272 --GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 --~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                        +.||+||-....   ...++.+.+.|++| |.++.-..
T Consensus       145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  183 (232)
T 3cbg_A          145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDNV  183 (232)
T ss_dssp             SCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEECT
T ss_pred             CCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence              479999943332   34578889999997 99887643

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.34  E-value=0.0094  Score=53.18  Aligned_cols=79  Identities=25%  Similarity=0.363  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eE--EcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DF--INPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~v--i~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..  .|-.+  .+++.+.+.+...  +++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999998 8999999999999999 99999999887766543 3321 22  22222  1233333333222  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++++.|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.33  E-value=0.018  Score=52.18  Aligned_cols=97  Identities=12%  Similarity=0.089  Sum_probs=63.3

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +|||+|+ |.+|...++.+... |. +|+++.+++++...+...+.. ++..+- .+.   +.+.+... ++|+||.+.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~-~~~~D~-~d~---~~l~~~~~-~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVS-VRQLDY-FNQ---ESMVEAFK-GMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBE-EEECCT-TCH---HHHHHHTT-TCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCE-EEEcCC-CCH---HHHHHHHh-CCCEEEEeCC
Confidence            5899998 99999998888877 88 899999998876554444443 332222 112   23333332 7999999987


Q ss_pred             CH-------HHHHHHHHHhccCC-ceEEEEcccC
Q 017335          283 LT-------SVMNDAFNSSREGW-GKTVILGVEM  308 (373)
Q Consensus       283 ~~-------~~~~~~~~~l~~~~-G~~v~~G~~~  308 (373)
                      ..       .....+++.++..+ ++++.++...
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            52       22445566665531 4788887654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.33  E-value=0.01  Score=53.21  Aligned_cols=81  Identities=19%  Similarity=0.166  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .+..+-....++.+.+.+...  ++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999988888899 8999999988766543    234322 222222111223333333222  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.33  E-value=0.0077  Score=52.65  Aligned_cols=96  Identities=17%  Similarity=0.153  Sum_probs=67.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cC-------CceEEcCCCCCCccHHHHHH
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FG-------ITDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lg-------a~~vi~~~~~~~~~~~~~i~  267 (373)
                      ++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    .|       .-.++..+.      ...  
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~------~~~--  145 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG------RMG--  145 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG------GGC--
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc------ccC--
Confidence            78999999999986 8888888888763 299999999988877753    22       112222221      100  


Q ss_pred             HhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          268 EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       268 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ....+.||+|+........+..+.+.|+++ |+++..-
T Consensus       146 ~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  182 (226)
T 1i1n_A          146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPV  182 (226)
T ss_dssp             CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             cccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            011237999997766555578899999997 9987753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.32  E-value=0.015  Score=51.65  Aligned_cols=81  Identities=14%  Similarity=0.174  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+... .+..+-....++.+.+.+..  .++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4679999998 9999999998888999 9999999987766543    234322 22222211123333333332  237


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (247)
T 3lyl_A           83 IDILVNNAGI   92 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.32  E-value=0.0085  Score=52.24  Aligned_cols=99  Identities=12%  Similarity=0.123  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...++.+||-+|+|. |..+..+++..  +. +|++++.+++..+.+++    .|..   .++.      .+..+.+..+
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~~  126 (223)
T 3duw_A           55 QIQGARNILEIGTLG-GYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT------GLALDSLQQI  126 (223)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHHH
T ss_pred             HhhCCCEEEEecCCc-cHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHHH
Confidence            446789999999986 88888888887  45 99999999988777753    3532   2332      2333333333


Q ss_pred             c---CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 T---DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~---~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .   .+.||+|+-....   ...++.+.+.|++| |.++.-..
T Consensus       127 ~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          127 ENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             HHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             HhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            2   1369999943322   34578889999997 98887654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.31  E-value=0.023  Score=49.91  Aligned_cols=79  Identities=16%  Similarity=0.162  Sum_probs=51.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-----HcCCce-EEcCCCCCCcc-HHHHHHHhc--CC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----KFGITD-FINPATCGDKT-VSQVIKEMT--DG  272 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-----~lga~~-vi~~~~~~~~~-~~~~i~~~~--~~  272 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.     ..+... ++..+- .+.+ +.+.+.+..  .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-SKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-CCHHHHHHHHHHHHHhcC
Confidence            678999998 8999999999999999 8999999988765542     234332 222221 1122 222221111  13


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.31  E-value=0.021  Score=51.65  Aligned_cols=81  Identities=15%  Similarity=0.143  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHH---HHHHhcCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQ---VIKEMTDG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~---~i~~~~~~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|... .+..+-...+++.+   .+.+..++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999999999 9999999987765432    234322 22222101122222   22222225


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            89999998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.31  E-value=0.02  Score=51.29  Aligned_cols=80  Identities=13%  Similarity=0.121  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHH---HhcCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIK---EMTDG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~---~~~~~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. .++..+-...+++.+.+.   +..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 8999999998888999 9999999987765432    22432 122222101122222222   22225


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|+++++.|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.30  E-value=0.017  Score=51.54  Aligned_cols=81  Identities=19%  Similarity=0.179  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----c-C--Cce-EEcCCCCCCccHHHHHHHhc--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F-G--ITD-FINPATCGDKTVSQVIKEMT--  270 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----l-g--a~~-vi~~~~~~~~~~~~~i~~~~--  270 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    . +  +.. ..|-......++.+.+.+..  
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            5789999998 8999999999989999 99999999887665432    1 2  211 12221011123333333222  


Q ss_pred             CCCccEEEECCCC
Q 017335          271 DGGADYCFECIGL  283 (373)
Q Consensus       271 ~~~~d~vid~~g~  283 (373)
                      .+++|+++++.|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2379999998874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.30  E-value=0.011  Score=53.92  Aligned_cols=81  Identities=19%  Similarity=0.323  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-...+++.+.+.+...  +++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999998 8999999999989999 9999999988776653 45532 2222222111223333333222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus       107 lvnnAg~  113 (277)
T 3gvc_A          107 LVANAGV  113 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.30  E-value=0.015  Score=52.49  Aligned_cols=81  Identities=19%  Similarity=0.194  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .+++|||+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.|.. .++..+-...+++.+.+.+..  .++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4689999998 9999999999999999 9999999987665432    23432 222222211122333333221  237


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            9999999873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.30  E-value=0.013  Score=52.51  Aligned_cols=79  Identities=15%  Similarity=0.081  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccH---HHHHHHhcCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTV---SQVIKEMTDG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~---~~~i~~~~~~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. .++..+-...+++   .+.+.+.  +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence            4789999998 8999999999999999 9999999988765543    23432 2222221111222   2233333  5


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            89999998884

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.29  E-value=0.015  Score=52.68  Aligned_cols=80  Identities=18%  Similarity=0.201  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCc-eEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMT--DGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~  274 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++...+.+++   .+.. ..+..+- .+.+-.+.+.+..  .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADL-ADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCT-TCHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHhcCCC
Confidence            4789999998 8999999999999999 89999977654444443   2322 1222221 1233222222221  1479


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |++|++.|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999998874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.29  E-value=0.015  Score=52.81  Aligned_cols=81  Identities=15%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|... .+..+-...+++.+.+.+...  ++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 8999999998888999 8999999988766543    234322 222221111223333333222  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999998874

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.28  E-value=0.0094  Score=55.02  Aligned_cols=94  Identities=12%  Similarity=0.012  Sum_probs=65.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc--eEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .+.+|+|+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++..  .++        ++ +.+.+.. ..+|+||
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--------~~-~~~~~~~-~~aDivI  209 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--------SL-AEAETRL-AEYDIII  209 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--------CH-HHHHHTG-GGCSEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--------eH-HHHHhhh-ccCCEEE
Confidence            678999999999999999999999987999999998886554 455542  222        12 1232222 2799999


Q ss_pred             ECCCCHHHH-----HHHHHHhccCCceEEEEcc
Q 017335          279 ECIGLTSVM-----NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       279 d~~g~~~~~-----~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|++....-     ......++++ ..++++..
T Consensus       210 n~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          210 NTTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             ECSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             ECCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            999865410     0112456775 77888865

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.28  E-value=0.012  Score=52.26  Aligned_cols=81  Identities=17%  Similarity=0.206  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---CceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++.   .-+++..+-...+++.+.+.+...  +.+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 9999999999988999 8999999987765543 332   112232222111223333332221  369


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |++|++.|.
T Consensus        84 d~li~~Ag~   92 (251)
T 1zk4_A           84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.28  E-value=0.0099  Score=53.90  Aligned_cols=81  Identities=17%  Similarity=0.194  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-....++.+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4678999998 9999999999999999 9999999988766654 34432 2222222111223333333222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|++.|.
T Consensus        83 lv~~Ag~   89 (281)
T 3m1a_A           83 LVNNAGR   89 (281)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.28  E-value=0.014  Score=52.36  Aligned_cols=80  Identities=14%  Similarity=0.146  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++... .++..+-....++.+.+.+...  +++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999998888999 9999999988766543 33321 2222221111233333332222  37999


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      +|++.|
T Consensus        85 lv~~Ag   90 (260)
T 1nff_A           85 LVNNAG   90 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.27  E-value=0.016  Score=52.12  Aligned_cols=81  Identities=15%  Similarity=0.054  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCc--eEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT--DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~--~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+     .+..  ..+..+-....++.+.+.+...  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 89999999887655432     3322  2222222111222222322221  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++++.|.
T Consensus        86 g~id~lvnnAg~   97 (265)
T 3lf2_A           86 GCASILVNNAGQ   97 (265)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.27  E-value=0.0082  Score=56.76  Aligned_cols=90  Identities=16%  Similarity=0.155  Sum_probs=65.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++....+.+++.|+..+        .++.+.+     ...|+|+.++
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell-----~~aDvV~l~~  228 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV--------EDLNEML-----PKCDVIVINM  228 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC--------SCHHHHG-----GGCSEEEECS
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc--------CCHHHHH-----hcCCEEEECC
Confidence            58899999999999999999999999 89999998777777777776422        1222221     1578888877


Q ss_pred             CCH-H----HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLT-S----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~-~----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ... .    .-...+..|+++ +.++.++.
T Consensus       229 Plt~~t~~li~~~~l~~mk~g-ailIN~aR  257 (351)
T 3jtm_A          229 PLTEKTRGMFNKELIGKLKKG-VLIVNNAR  257 (351)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence            642 1    124567778886 88877764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.27  E-value=0.014  Score=53.48  Aligned_cols=81  Identities=12%  Similarity=0.060  Sum_probs=51.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-H---cCC--ceEEcCCCCCCc-cHHHHH-HHhc-
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K---FGI--TDFINPATCGDK-TVSQVI-KEMT-  270 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~---lga--~~vi~~~~~~~~-~~~~~i-~~~~-  270 (373)
                      ..+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +   .+.  -.++..+- .+. +..+.+ .... 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDV-TDPIATMSSLADFIKT   87 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCT-TSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccC-CCcHHHHHHHHHHHHH
Confidence            35789999998 8999999998888999 9999999988755432 2   222  12222222 112 222222 2221 


Q ss_pred             -CCCccEEEECCCC
Q 017335          271 -DGGADYCFECIGL  283 (373)
Q Consensus       271 -~~~~d~vid~~g~  283 (373)
                       .+++|++|++.|.
T Consensus        88 ~~g~iD~lv~nAg~  101 (311)
T 3o26_A           88 HFGKLDILVNNAGV  101 (311)
T ss_dssp             HHSSCCEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             1379999999985

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.27  E-value=0.013  Score=52.35  Aligned_cols=80  Identities=26%  Similarity=0.315  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++.. .++..+-...+++.+.+.+...  +++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4789999998 9999999999999999 999999988766554 345532 2222222111233333332221  37999


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      +|++.|
T Consensus        90 li~~Ag   95 (265)
T 2o23_A           90 AVNCAG   95 (265)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999877

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.27  E-value=0.0081  Score=54.13  Aligned_cols=80  Identities=11%  Similarity=0.017  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH-HHHHHcCCceEEcCCCCCCccHHHHHHHhc--CCCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITDFINPATCGDKTVSQVIKEMT--DGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~-~~~~~lga~~vi~~~~~~~~~~~~~i~~~~--~~~~d~v  277 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++. +.+++.++. .+..+-....++.+.+.+..  .+++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAV-ALYGDFSCETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCE-EEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCe-EEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999998 8999999999888999 899999887663 344556643 32222211122333333322  2379999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +++.|.
T Consensus       104 v~nAg~  109 (260)
T 3gem_A          104 VHNASE  109 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998873

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.27  E-value=0.038  Score=50.49  Aligned_cols=86  Identities=15%  Similarity=0.208  Sum_probs=61.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+++.|.. +.       .+..+.+.     .+|+||.|+..+
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~~-------~~~~~~~~-----~~D~vi~~v~~~   72 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAE-TA-------STAKAIAE-----QCDVIITMLPNS   72 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------SSHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCe-ec-------CCHHHHHh-----CCCEEEEECCCH
Confidence            79999999999998888888898 899999999988888776642 11       12322222     478999998865


Q ss_pred             HHHHHHH-------HHhccCCceEEEEc
Q 017335          285 SVMNDAF-------NSSREGWGKTVILG  305 (373)
Q Consensus       285 ~~~~~~~-------~~l~~~~G~~v~~G  305 (373)
                      ..+...+       ..++++ ..++.++
T Consensus        73 ~~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           73 PHVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            5344444       456665 6666554

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.27  E-value=0.0066  Score=53.62  Aligned_cols=96  Identities=17%  Similarity=0.207  Sum_probs=60.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCc-cHH---HHHHHhcC-CCccE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK-TVS---QVIKEMTD-GGADY  276 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~-~~~---~~i~~~~~-~~~d~  276 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++.+     +....+..+- .+. ++.   +.+.+..+ +++|+
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~-~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNK-NWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTS-CHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCC-CCHHHHHHHHHHHHHHhCCCCCCE
Confidence            568999998 9999999999999999 9999998876532     1112221111 112 222   22222222 47999


Q ss_pred             EEECCCC--------HH------------------HHHHHHHHhccCCceEEEEcc
Q 017335          277 CFECIGL--------TS------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       277 vid~~g~--------~~------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|++.|.        ..                  ..+.+.+.++++ |+++.++.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS  130 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGA  130 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEECc
Confidence            9999872        11                  133445556676 89998875

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.26  E-value=0.02  Score=51.29  Aligned_cols=80  Identities=11%  Similarity=0.110  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc---CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT---DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~---~~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. ..+..+-....++.+.+.+..   .+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4688999998 8999999999999999 9999999987765442    22432 222222111123333333321   35


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      .+|+++++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999984

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.25  E-value=0.013  Score=50.96  Aligned_cols=95  Identities=12%  Similarity=0.114  Sum_probs=61.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+  .+. +++..+-   .+..+.+.+... ++|+||.+.|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~---~d~~~~~~~~~~-~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDV---DWTPEEMAKQLH-GMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCT---TSCHHHHHTTTT-TCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecc---cCCHHHHHHHHc-CCCEEEECCcC
Confidence            6899998 9999999999999998 999999998765432  122 3333332   121234444433 79999999885


Q ss_pred             HH---------HHHHHHHHhccC-CceEEEEccc
Q 017335          284 TS---------VMNDAFNSSREG-WGKTVILGVE  307 (373)
Q Consensus       284 ~~---------~~~~~~~~l~~~-~G~~v~~G~~  307 (373)
                      ..         ....+++.++.. .++++.++..
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  107 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI  107 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence            32         233444555443 1588888763

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.25  E-value=0.009  Score=58.70  Aligned_cols=92  Identities=21%  Similarity=0.269  Sum_probs=69.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      --.|.+|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|+. +        .++.    +.. ...|+|+-
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~--------~~l~----ell-~~aDiVi~  318 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V--------VTLD----EIV-DKGDFFIT  318 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E--------CCHH----HHT-TTCSEEEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e--------cCHH----HHH-hcCCEEEE
Confidence            3578999999999999999999999999 999999998876455556652 2        1222    222 26899998


Q ss_pred             CCCCHHHH-HHHHHHhccCCceEEEEccc
Q 017335          280 CIGLTSVM-NDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       280 ~~g~~~~~-~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +.+....+ ...+..|+++ +.++.+|..
T Consensus       319 ~~~t~~lI~~~~l~~MK~g-ailiNvgrg  346 (479)
T 1v8b_A          319 CTGNVDVIKLEHLLKMKNN-AVVGNIGHF  346 (479)
T ss_dssp             CCSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred             CCChhhhcCHHHHhhcCCC-cEEEEeCCC
Confidence            87654434 3677889997 999999863

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.25  E-value=0.02  Score=51.61  Aligned_cols=79  Identities=16%  Similarity=0.145  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----Hc--CCc-eEEcCCCCCCccHHHHHHHhcCCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KF--GIT-DFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~l--ga~-~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.  +.. ..+..+- .+.+..+.+.+.. ++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADL-GTEQGCQDVIEKY-PK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-TSHHHHHHHHHHC-CC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-CCHHHHHHHHHhc-CC
Confidence            4789999998 8999999999889999 9999999987755432    22  221 1222221 1233333333322 47


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.24  E-value=0.028  Score=51.14  Aligned_cols=80  Identities=18%  Similarity=0.212  Sum_probs=49.9

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChh---HHHHHHH-cCCceEEcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .++++||+|+   |++|.+.++.+...|+ +|++++++++   ..+.+.+ .+...++..+-....++.+.+.+..  .+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999986   5899999998888999 9999998875   2333322 3422233222211122323333222  24


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|++.|
T Consensus        99 ~iD~lv~~Ag  108 (285)
T 2p91_A           99 SLDIIVHSIA  108 (285)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.24  E-value=0.0096  Score=53.32  Aligned_cols=81  Identities=19%  Similarity=0.310  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.. +.+..+-...+++.+.+.+...  +++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999998 8999999999999999 999999988776554 334422 2222222111233333333222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        85 lv~nAg~   91 (257)
T 3tpc_A           85 LVNCAGT   91 (257)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.24  E-value=0.02  Score=51.86  Aligned_cols=78  Identities=18%  Similarity=0.302  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC-CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD-GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~-~~~d~v  277 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. .++..+-....++.+.+.+... +++|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            4689999998 8999999998888999 9999999988876654 45543 2222222112333344444411 268999


Q ss_pred             EEC
Q 017335          278 FEC  280 (373)
Q Consensus       278 id~  280 (373)
                      +.+
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            987

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.24  E-value=0.0069  Score=53.35  Aligned_cols=102  Identities=15%  Similarity=0.127  Sum_probs=69.0

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--c--eEEcCCCCCCccHHHHHHHhcC
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--T--DFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~--~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      +...++++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++.-.  .  .++..+.   .+.. ..... .
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~-~~~~~-~  141 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQ-EYANI-V  141 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGG-GGTTT-S
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCcc-ccccc-C
Confidence            334578899999999987 8888899998874499999999988877764321  1  2222222   1100 00011 2


Q ss_pred             CCccEEEECCCCH----HHHHHHHHHhccCCceEEEE
Q 017335          272 GGADYCFECIGLT----SVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~~~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.+|+|+..+...    ..+..+.+.|+++ |+++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            4799999655543    3478888999997 998886

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.24  E-value=0.014  Score=52.69  Aligned_cols=81  Identities=15%  Similarity=0.287  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+     .+... .+..+-....++.+.+.+...  +
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999998 8999999999999999 99999999887655432     34322 222221112333333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        98 ~id~lv~nAg~  108 (266)
T 4egf_A           98 GLDVLVNNAGI  108 (266)
T ss_dssp             SCSEEEEECCC
T ss_pred             CCCEEEECCCc
Confidence            79999998773

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.24  E-value=0.015  Score=51.64  Aligned_cols=81  Identities=15%  Similarity=0.264  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc--eEEcCCCCCCccHHHHHHHhc-CCCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMT-DGGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~--~vi~~~~~~~~~~~~~i~~~~-~~~~d~  276 (373)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++..  ..+..+-...+++.+.+.+.. .+++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            4689999998 9999999999988999 999999998876654 334432  222222101122222222211 247999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|++.|.
T Consensus        89 li~~Ag~   95 (254)
T 2wsb_A           89 LVNSAGI   95 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998873

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.24  E-value=0.0081  Score=52.43  Aligned_cols=100  Identities=14%  Similarity=0.159  Sum_probs=68.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhc
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++.+||-+|+|. |..+..+++.++ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+....
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~~~  133 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL------SPAKDTLAELI  133 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHHHH
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe------CCHHHHHHHhh
Confidence            345788999999976 888888888764 3399999999988877754    3432   2332      23333333332


Q ss_pred             C----CCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          271 D----GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~----~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .    +.||+|+-....   ...+..+.+.|++| |.++.-..
T Consensus       134 ~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  175 (225)
T 3tr6_A          134 HAGQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNV  175 (225)
T ss_dssp             TTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred             hccCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            2    479999944332   33578888999997 99987644

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.23  E-value=0.038  Score=51.06  Aligned_cols=44  Identities=23%  Similarity=0.211  Sum_probs=39.9

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~   65 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGA   65 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCC
Confidence            589999999999999999999999 99999999999888887775

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.23  E-value=0.026  Score=54.58  Aligned_cols=96  Identities=16%  Similarity=0.183  Sum_probs=67.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+.+|+|+|.|.+|..+++.++..|. .|++++.++++.+.+++.|... +..+. .+.++   +++.--..+|+|+-++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~v-i~GDa-t~~~~---L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKV-FYGDA-TRMDL---LESAGAAKAEVLINAI   76 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCC-EESCT-TCHHH---HHHTTTTTCSEEEECC
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeE-EEcCC-CCHHH---HHhcCCCccCEEEECC
Confidence            34679999999999999999999999 9999999999999999988753 33332 11332   3333223799999999


Q ss_pred             CCHHHHH---HHHHHhccCCceEEEE
Q 017335          282 GLTSVMN---DAFNSSREGWGKTVIL  304 (373)
Q Consensus       282 g~~~~~~---~~~~~l~~~~G~~v~~  304 (373)
                      +....-.   ...+.+.+. -+++.-
T Consensus        77 ~~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             CChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            9866332   333444554 566544

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.23  E-value=0.014  Score=51.66  Aligned_cols=81  Identities=16%  Similarity=0.268  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCc-eEEcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT-DFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~-~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+     .+.. .++..+-....++.+.+.+..  .+
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 9999999998888999 99999999877655432     3432 222222211123333333222  23


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|.+.|.
T Consensus        85 ~~d~vi~~Ag~   95 (248)
T 2pnf_A           85 GIDILVNNAGI   95 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.23  E-value=0.018  Score=51.32  Aligned_cols=80  Identities=16%  Similarity=0.256  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+.. .++..+-....++.+.+.+...  ++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999888999 999999988765443    223432 2222222111233333332221  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|.+.|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999876

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.22  E-value=0.0098  Score=52.05  Aligned_cols=87  Identities=11%  Similarity=0.157  Sum_probs=58.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++++             .|-.+  .+++.+.+.++  +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~--~~~v~~~~~~~--g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD--EKSVYHYFETI--GAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC--HHHHHHHHHHH--CSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC--HHHHHHHHHHh--CCCCEEEEC
Confidence            4678999998 8999999998888899 9999997755             12222  12233333333  478999988


Q ss_pred             CCCH--------------------------HHHHHHHHHhccCCceEEEEccc
Q 017335          281 IGLT--------------------------SVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       281 ~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .|..                          ...+.+.+.++++ |+++.++..
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~  118 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM  118 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence            7732                          0233444556676 999998753

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.21  E-value=0.022  Score=50.88  Aligned_cols=100  Identities=16%  Similarity=0.330  Sum_probs=68.5

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc--eEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      +.+....+++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++.    |..  .++..+.   .++     
T Consensus        29 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l-----   97 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATGG-GHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   97 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHHhCCCCCCEEEEEeCCC-CHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhC-----
Confidence            44556778999999999974 77777777764 4 999999999888877642    322  2332222   111     


Q ss_pred             HhcCCCccEEEECCCC------HHHHHHHHHHhccCCceEEEEc
Q 017335          268 EMTDGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       268 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...++.||+|+....-      ...+..+.+.|+++ |+++...
T Consensus        98 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A           98 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            1222479999965432      34688999999997 9998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.20  E-value=0.02  Score=51.77  Aligned_cols=80  Identities=10%  Similarity=0.152  Sum_probs=50.2

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChh---HHHHHHH-cCCceEEcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .++++||+|+   |++|.+.++.+...|+ +|++++++++   ..+.+.+ .+...++..+-....++.+.+.+..  .+
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999986   6899999999988999 8999998875   3333332 3422333222211122333333222  23


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|++.|
T Consensus        84 ~id~lv~nAg   93 (275)
T 2pd4_A           84 SLDFIVHSVA   93 (275)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999887

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.20  E-value=0.007  Score=54.75  Aligned_cols=80  Identities=16%  Similarity=0.132  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+..... ..+..+-....++.+.+.+...  +++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4689999998 8999999999999999 99999999877655432221 1222221111233333333222  3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99884

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.20  E-value=0.02  Score=50.71  Aligned_cols=98  Identities=16%  Similarity=0.187  Sum_probs=61.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCc-cHHH---HHHHhcC-CCc
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK-TVSQ---VIKEMTD-GGA  274 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~-~~~~---~i~~~~~-~~~  274 (373)
                      ..++++||+|+ |++|.+.++.+...|+ +|+++++++++..     +....+..+- .+. ++.+   .+.+..+ +++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTD-SFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCS-CHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCC-CCHHHHHHHHHHHHHHhCCCCC
Confidence            35789999998 8999999999999999 9999998876532     1112221111 112 2222   2222222 479


Q ss_pred             cEEEECCCC--------HH------------------HHHHHHHHhccCCceEEEEcc
Q 017335          275 DYCFECIGL--------TS------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       275 d~vid~~g~--------~~------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |++|++.|.        ..                  ..+.+.+.++.+ |+++.++.
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-g~iv~isS  134 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGA  134 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC-CEEEEECC
Confidence            999998873        10                  123344555666 99998875

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.19  E-value=0.022  Score=53.90  Aligned_cols=134  Identities=18%  Similarity=0.180  Sum_probs=84.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHC-CCCeEEE-EcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGLGAVGLAVAEGARLN-RASKIIG-VDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~-~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      -+|.|+|.|.+|...+..++.. ++ ++++ .++++++.+.+++.|+. ++       .++.+.+.   ...+|+|+.|+
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~-~~-------~~~~~ll~---~~~~D~V~i~t   73 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLK-IY-------ESYEAVLA---DEKVDAVLIAT   73 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCC-BC-------SCHHHHHH---CTTCCEEEECS
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCc-ee-------CCHHHHhc---CCCCCEEEEcC
Confidence            4789999999999888877766 66 6665 57788888777777763 22       23433332   23799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      ......+.+..+++.  |+-|++..+.....-. .....+..  +..+.-..  .++....+..+.+++++|+|-
T Consensus        74 p~~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  144 (359)
T 3e18_A           74 PNDSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ--NRRWDEDFLIIKEMFEQKTIG  144 (359)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHHTTTS
T ss_pred             CcHHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eeccCHHHHHHHHHHHcCCCC
Confidence            987778888888887  4555564422111000 01111222  44443222  222246788888999998874

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.19  E-value=0.01  Score=54.15  Aligned_cols=94  Identities=18%  Similarity=0.248  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-----CC---------c--eEEcCCCCCCccHHH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----GI---------T--DFINPATCGDKTVSQ  264 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-----ga---------~--~vi~~~~~~~~~~~~  264 (373)
                      ..+.+||++|+|. |..+..+++. +..+|++++.+++..+.+++.     +.         .  +++.      .+..+
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~------~D~~~  145 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGFE  145 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE------CchHH
Confidence            4678999999876 6677778877 766999999999988888752     11         1  2222      23333


Q ss_pred             HHHHhcCCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEc
Q 017335          265 VIKEMTDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       265 ~i~~~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .+..  ++.+|+|+ |...         ....+..+.+.|+++ |.++...
T Consensus       146 ~l~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  193 (281)
T 1mjf_A          146 FIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  193 (281)
T ss_dssp             HHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             Hhcc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            3333  45899999 4432         245688999999997 9988753

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.18  E-value=0.03  Score=48.26  Aligned_cols=99  Identities=10%  Similarity=0.064  Sum_probs=64.6

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC-----------------ceEEcCCC
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI-----------------TDFINPAT  256 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga-----------------~~vi~~~~  256 (373)
                      +....+.++.+||.+|+|. |..+..+++. |+ +|+++|.+++..+.+++. +.                 -.++..+-
T Consensus        15 ~~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           15 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            3445678899999999976 7777788876 88 999999999988888652 21                 12222221


Q ss_pred             CCCccHHHHHHHhcCCCccEEEECCCC--------HHHHHHHHHHhccCCceEEEE
Q 017335          257 CGDKTVSQVIKEMTDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       257 ~~~~~~~~~i~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       .+-.+..      .+.||+|++...-        ...+..+.+.|++| |+++++
T Consensus        92 -~~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           92 -FALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             -SSSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             -ccCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence             0011100      0379999973221        12467889999997 994433

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.18  E-value=0.013  Score=51.03  Aligned_cols=95  Identities=18%  Similarity=0.242  Sum_probs=61.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++...+.  ..-.++..+- .+.   +.+.+... ++|+||.+.|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~Dl-~d~---~~~~~~~~-~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKADV-SSL---DEVCEVCK-GADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCCT-TCH---HHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEecC-CCH---HHHHHHhc-CCCEEEEeCc
Confidence            58999998 9999999999999998 9999999987653321  1112333222 112   22333332 6999999988


Q ss_pred             CH-----------HHHHHHHHHhccCC-ceEEEEcc
Q 017335          283 LT-----------SVMNDAFNSSREGW-GKTVILGV  306 (373)
Q Consensus       283 ~~-----------~~~~~~~~~l~~~~-G~~v~~G~  306 (373)
                      ..           .....+++.++..+ .+++.++.
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  112 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG  112 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence            64           12344555565531 37888765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.18  E-value=0.041  Score=51.11  Aligned_cols=88  Identities=15%  Similarity=0.194  Sum_probs=60.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+     ...|+||-|+.
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~e~~-----~~aDvVi~~vp   96 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH--------EQARAAA-----RDADIVVSMLE   96 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE--------SSHHHHH-----TTCSEEEECCS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee--------CCHHHHH-----hcCCEEEEECC
Confidence            4589999999999999999989999 99999999999888877665321        1222222     15778888877


Q ss_pred             CHHHHHHHH------HHhccCCceEEEEc
Q 017335          283 LTSVMNDAF------NSSREGWGKTVILG  305 (373)
Q Consensus       283 ~~~~~~~~~------~~l~~~~G~~v~~G  305 (373)
                      .+..+...+      ..++++ ..++..+
T Consensus        97 ~~~~~~~v~~~~~~~~~l~~~-~~vi~~s  124 (320)
T 4dll_A           97 NGAVVQDVLFAQGVAAAMKPG-SLFLDMA  124 (320)
T ss_dssp             SHHHHHHHHTTTCHHHHCCTT-CEEEECS
T ss_pred             CHHHHHHHHcchhHHhhCCCC-CEEEecC
Confidence            654344433      245564 5555554

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=96.18  E-value=0.035  Score=50.28  Aligned_cols=104  Identities=15%  Similarity=0.174  Sum_probs=66.8

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~  268 (373)
                      ....++++++||-+|+|+ |..+..+++.+ +..+|+++|.++++.+.+++    .|..  .++..+.   .++...+. 
T Consensus        77 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~---~~~~~~~~-  151 (274)
T 3ajd_A           77 IVLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADM---RKYKDYLL-  151 (274)
T ss_dssp             HHHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH---HHHHHHHH-
T ss_pred             HHhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh---Hhcchhhh-
Confidence            345788999999998876 66677777765 43499999999998877653    4542  2333222   12211110 


Q ss_pred             hcCCCccEEE-E--CCCC---------------------HHHHHHHHHHhccCCceEEEEc
Q 017335          269 MTDGGADYCF-E--CIGL---------------------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       269 ~~~~~~d~vi-d--~~g~---------------------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...+.||+|+ |  |+|.                     ...+..+++.|++| |+++..-
T Consensus       152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~st  211 (274)
T 3ajd_A          152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYST  211 (274)
T ss_dssp             HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEE
Confidence            0134799998 5  4442                     34577888899997 9988654

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.17  E-value=0.029  Score=51.10  Aligned_cols=97  Identities=14%  Similarity=0.103  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|.   -.++..+-   .++     ...+
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~~  148 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI-----PCED  148 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC-----SSCT
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccC-----CCCC
Confidence            788999999999975 7788888888788 99999999988777654    332   12333222   111     1122


Q ss_pred             CCccEEEECCCC------HHHHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+|+|+....-      ...+..+.+.|++| |++++...
T Consensus       149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            379999964321      34688999999997 99887753

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.17  E-value=0.019  Score=53.01  Aligned_cols=99  Identities=18%  Similarity=0.106  Sum_probs=66.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----------CceEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----------ITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----------a~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-          .-.++.      .+..+.+...
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~~~~~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV------GDGLAFVRQT  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHSS
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHHhc
Confidence            35678999999876 667777787655459999999998888776521          112322      2333333322


Q ss_pred             cCCCccEEEE-CCCC---------HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCFE-CIGL---------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .++.||+|+- ....         ...+..+.+.|+++ |.++....
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            3448999994 3211         35588899999997 99988643

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.16  E-value=0.024  Score=52.72  Aligned_cols=89  Identities=18%  Similarity=0.255  Sum_probs=64.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++. .+++.|+.. .        ++.+.+.     ..|+|+.+
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~-~--------~l~ell~-----~aDvVvl~  203 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA-V--------SLEELLK-----NSDVISLH  203 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE-C--------CHHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee-c--------CHHHHHh-----hCCEEEEe
Confidence            357899999999999999999999999 999999988765 456677642 1        1222221     47888888


Q ss_pred             CCCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          281 IGLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      +....    .+ ...+..++++ +.++.++.
T Consensus       204 ~P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          204 VTVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             ccCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            76432    12 4566778886 88877764

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.15  E-value=0.037  Score=49.27  Aligned_cols=74  Identities=18%  Similarity=0.144  Sum_probs=51.5

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .-.++++||+|+ |++|.+.++.+...|+ +|++++++++..   ++++...++ .+-  ..++.+.+.+..  ++|++|
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~-~D~--~~~~~~~~~~~~--~iD~lv   86 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CDL--RKDLDLLFEKVK--EVDILV   86 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CCT--TTCHHHHHHHSC--CCSEEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEE-eeH--HHHHHHHHHHhc--CCCEEE
Confidence            346889999998 9999999999989999 999999987443   344532333 221  134444333332  799999


Q ss_pred             ECCC
Q 017335          279 ECIG  282 (373)
Q Consensus       279 d~~g  282 (373)
                      ++.|
T Consensus        87 ~~Ag   90 (249)
T 1o5i_A           87 LNAG   90 (249)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.14  E-value=0.017  Score=51.48  Aligned_cols=78  Identities=13%  Similarity=0.170  Sum_probs=51.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. +.+..+-...+++.+.+.+...  +++|+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            36899998 8999999999888999 9999999988766653 34422 2222222111333334443333  2799999


Q ss_pred             ECCC
Q 017335          279 ECIG  282 (373)
Q Consensus       279 d~~g  282 (373)
                      ++.|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.14  E-value=0.016  Score=52.50  Aligned_cols=78  Identities=17%  Similarity=0.170  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eE--EcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v--i~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. ..  .|-.+  ..++.+.+.+...  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 8999999999989999 9999999987765542    33422 22  22222  1233333333222  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|++.|
T Consensus       104 g~iD~lvnnAg  114 (270)
T 3ftp_A          104 GALNVLVNNAG  114 (270)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.14  E-value=0.065  Score=50.91  Aligned_cols=118  Identities=14%  Similarity=0.145  Sum_probs=79.7

Q ss_pred             HHHhCC-CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC----hhH---------HHHHHHcCCceEEcCCCCCCc
Q 017335          195 WKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN----PEK---------FEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       195 ~~~~~~-~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~----~~~---------~~~~~~lga~~vi~~~~~~~~  260 (373)
                      .+..+. -++.+|+|+|+|..|..+++++..+|+++|++++++    .++         ..++++...    ....   .
T Consensus       183 ~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~~~~---~  255 (388)
T 1vl6_A          183 LKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----ERLS---G  255 (388)
T ss_dssp             HHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----TCCC---S
T ss_pred             HHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----cCch---h
Confidence            344443 367799999999999999999999999899999998    544         334443221    0111   3


Q ss_pred             cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      ++.+.+.     ++|++|-+++....-+..++.|+++ ..++.+..+.    -+..+.+.+. +..+.++
T Consensus       256 ~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt----~E~~p~~a~~~g~~i~at  315 (388)
T 1vl6_A          256 DLETALE-----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV----PEIDPELAREAGAFIVAT  315 (388)
T ss_dssp             CHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS----CSSCHHHHHHTTCSEEEE
T ss_pred             hHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC----CCCCHHHHHHhcCeEEEe
Confidence            4555543     5899998887444445677788886 7666665532    2566666666 6667666

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.14  E-value=0.018  Score=51.54  Aligned_cols=79  Identities=16%  Similarity=0.265  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHH-Hc----CCce-EEcCCCCCCc-cHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGK-KF----GITD-FINPATCGDK-TVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~-~l----ga~~-vi~~~~~~~~-~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+. .+    |... .+..+- .+. ++.+.+.+... 
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-SKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-CCHHHHHHHHHHHHHh
Confidence            4688999998 8999999999999999 89999988776 44432 22    4332 222222 122 23333332222 


Q ss_pred             -CCccEEEECCC
Q 017335          272 -GGADYCFECIG  282 (373)
Q Consensus       272 -~~~d~vid~~g  282 (373)
                       +++|++|++.|
T Consensus        81 ~g~iD~lv~~Ag   92 (260)
T 1x1t_A           81 MGRIDILVNNAG   92 (260)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999887

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.12  E-value=0.019  Score=53.83  Aligned_cols=88  Identities=25%  Similarity=0.381  Sum_probs=64.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+++.|+...         ++.    ++. ...|+|+.++
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~----ell-~~aDvV~l~~  227 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQL---------PLE----EIW-PLCDFITVHT  227 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEEC---------CHH----HHG-GGCSEEEECC
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCceeC---------CHH----HHH-hcCCEEEEec
Confidence            57899999999999999999999999 99999988766 35666776421         121    111 1688999887


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....    .+ ...+..++++ +.++.++.
T Consensus       228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            7542    12 3567788886 88888875

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.11  E-value=0.01  Score=56.41  Aligned_cols=90  Identities=19%  Similarity=0.251  Sum_probs=64.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCe-EEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASK-IIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~-Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .|.+|.|+|.|.+|...++.++.+|. + |++.+++..+.+.+.++|+..+        .++.+.+.     ..|+|+.+
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~  228 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV--------ENIEELVA-----QADIVTVN  228 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC--------SSHHHHHH-----TCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec--------CCHHHHHh-----cCCEEEEC
Confidence            68899999999999999999999999 6 9999988766666777775321        12222221     57888887


Q ss_pred             CCCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          281 IGLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      +....    .+ ...+..|+++ +.++.++.
T Consensus       229 ~P~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          229 APLHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            76531    12 3456777786 77777664

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.11  E-value=0.034  Score=51.61  Aligned_cols=91  Identities=24%  Similarity=0.292  Sum_probs=64.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+|.|+|.|.+|...+..++..|.. +|++.++++++.+.+++.|.. .....-    .++      . -..+|+||.|+
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~----~~~------~-~~~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI----AKV------E-DFSPDFVMLSS  102 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT----TGG------G-GGCCSEEEECS
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH----HHH------h-hccCCEEEEeC
Confidence            6899999999999999999988864 799999999999999888863 222211    110      0 12689999988


Q ss_pred             CCHH---HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS---VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~---~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....   .+..+...++++ ..++.++.
T Consensus       103 p~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          103 PVRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             CGGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CHHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            8644   234455556775 66666653

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.11  E-value=0.0088  Score=53.65  Aligned_cols=78  Identities=22%  Similarity=0.227  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc-CCCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIGKKFGITDFINPATCGDKTVSQVIKEMT-DGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~-~~~~d~v  277 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++  +..+.+++.|.......-+..+++-   +++.. .+++|++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~---v~~~~~~g~iDiL   83 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPLA---AKDSFTDAGFDIL   83 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTT---TTTSSTTTCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHH---HHHHHHhCCCCEE
Confidence            5889999998 8999999999999999 999999875  3455666777543211111111221   22222 3489999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +++.|.
T Consensus        84 VNNAGi   89 (247)
T 4hp8_A           84 VNNAGI   89 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.10  E-value=0.025  Score=51.49  Aligned_cols=81  Identities=20%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHHH----Hc-CCc-eEEcCCCCCCccHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGK----KF-GIT-DFINPATCGDKTVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~~----~l-ga~-~vi~~~~~~~~~~~~~i~~~~--~  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+.    +. +.. ..+..+-....++.+.+.+..  -
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            4689999998 8999999999999999 9999998 545444432    22 322 222222211122333333322  2


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++++.|.
T Consensus       103 g~iD~lv~nAg~  114 (281)
T 3v2h_A          103 GGADILVNNAGV  114 (281)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.10  E-value=0.022  Score=52.01  Aligned_cols=80  Identities=13%  Similarity=0.109  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eEEcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~-~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .+.++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +    +.. .++..+-...+++.+.+.+..  .+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4689999998 9999999999999999 99999999877654322 2    432 222222211123333333221  23


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      .+|++|++.|
T Consensus       104 ~id~li~~Ag  113 (302)
T 1w6u_A          104 HPNIVINNAA  113 (302)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999887

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.09  E-value=0.019  Score=54.22  Aligned_cols=88  Identities=17%  Similarity=0.171  Sum_probs=64.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+..+        .++.+.+.     ..|+|+-++
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~--------~~l~ell~-----~aDiV~l~~  223 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA--------ESKDALFE-----QSDVLSVHL  223 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe--------CCHHHHHh-----hCCEEEEec
Confidence            47799999999999999999999999 999999875 4455666776421        12333222     478999877


Q ss_pred             CCHH-----HHHHHHHHhccCCceEEEEc
Q 017335          282 GLTS-----VMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       282 g~~~-----~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ....     .-...+..|+++ +.++.++
T Consensus       224 Plt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          224 RLNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             cCcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            6322     123567788997 8888887

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.09  E-value=0.016  Score=51.46  Aligned_cols=81  Identities=17%  Similarity=0.137  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .+.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+.    ..+.. .++..+-....++.+.+.+...  ++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999998 9999999999888999 9999999987655432    23432 2222222111223333332211  37


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|.+.|.
T Consensus        89 ~d~vi~~Ag~   98 (255)
T 1fmc_A           89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.08  E-value=0.027  Score=52.28  Aligned_cols=96  Identities=15%  Similarity=0.088  Sum_probs=60.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC---hhHHHHHH-Hc----CCc-eEEcCCCCCCccH-HHHHHHhcC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---PEKFEIGK-KF----GIT-DFINPATCGDKTV-SQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~~-~l----ga~-~vi~~~~~~~~~~-~~~i~~~~~  271 (373)
                      .++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+. ++    +.. .++...+   .++ .+.+     
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~---l~~~~~~l-----  218 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD---QHAFTEAL-----  218 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHH-----
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh---hhhhHhhc-----
Confidence            58899999999999999999999999889999999   55555432 22    221 2332222   111 1111     


Q ss_pred             CCccEEEECCCCHHH--HHH----HHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLTSV--MND----AFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~~~--~~~----~~~~l~~~~G~~v~~G~  306 (373)
                      ..+|+||+|++....  -..    -...++++ ..++++-.
T Consensus       219 ~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~-~~v~D~vY  258 (312)
T 3t4e_A          219 ASADILTNGTKVGMKPLENESLIGDVSLLRPE-LLVTECVY  258 (312)
T ss_dssp             HHCSEEEECSSTTSTTSTTCCSCCCGGGSCTT-CEEEECCC
T ss_pred             cCceEEEECCcCCCCCCCCCcccCCHHHcCCC-CEEEEecc
Confidence            158999999875320  000    12456675 67777744

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=96.08  E-value=0.02  Score=52.48  Aligned_cols=44  Identities=20%  Similarity=0.237  Sum_probs=37.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      .++.+||-+|+|. |..++.+++..+..+|+++|.++...+.+++
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~   88 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQ   88 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            4688999999986 8888899998765599999999988888765

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.07  E-value=0.02  Score=51.91  Aligned_cols=81  Identities=17%  Similarity=0.221  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCc-cHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDK-TVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~-~~~~~i~~~~--~~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|....+..-+..+. ++.+.+.+..  .++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4789999998 8999999999999999 9999999988765542    3354322222221222 2333333222  237


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.07  E-value=0.011  Score=53.72  Aligned_cols=100  Identities=11%  Similarity=0.063  Sum_probs=68.7

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHHc-----CCc--eEEcCCCCCCccHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKF-----GIT--DFINPATCGDKTVSQ  264 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~l-----ga~--~vi~~~~~~~~~~~~  264 (373)
                      +.....++++++||-+|+|. |..+..+++..  +. +|++++.+++..+.+++.     |.+  .++..+.      .+
T Consensus       102 ~~~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~------~~  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI------AD  173 (275)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT------TT
T ss_pred             HHHHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch------hc
Confidence            44556789999999999975 77888888873  45 999999999988877642     532  2333222      11


Q ss_pred             HHHHhcCCCccEEEECCCCH-HHHHHHHHHhccCCceEEEEc
Q 017335          265 VIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       265 ~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G  305 (373)
                         ...++.+|+|+...... ..+..+.+.|+++ |+++...
T Consensus       174 ---~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  211 (275)
T 1yb2_A          174 ---FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  211 (275)
T ss_dssp             ---CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             ---cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence               11223799999755543 4588899999997 9988775

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.07  E-value=0.021  Score=51.60  Aligned_cols=80  Identities=9%  Similarity=-0.031  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHHH-Hc----CCc-eEEcCCCCCC----ccHHHHHHHh
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGK-KF----GIT-DFINPATCGD----KTVSQVIKEM  269 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~~-~l----ga~-~vi~~~~~~~----~~~~~~i~~~  269 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+. ++    +.. .++..+-...    .++.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999998 8999999999989999 9999998 777655442 22    432 2222222112    2222222222


Q ss_pred             c--CCCccEEEECCC
Q 017335          270 T--DGGADYCFECIG  282 (373)
Q Consensus       270 ~--~~~~d~vid~~g  282 (373)
                      .  .+++|++|++.|
T Consensus        89 ~~~~g~id~lv~nAg  103 (276)
T 1mxh_A           89 FRAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            1  137999999887

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.07  E-value=0.033  Score=50.65  Aligned_cols=93  Identities=12%  Similarity=0.055  Sum_probs=64.2

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      .+...+.+|+|+|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++.. .- . .   .         ....+|+
T Consensus       114 ~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~-~-~---~---------~~~~~Di  178 (271)
T 1npy_A          114 YHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YI-N-S---L---------ENQQADI  178 (271)
T ss_dssp             TTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EE-S-C---C---------TTCCCSE
T ss_pred             hCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cc-h-h---h---------hcccCCE
Confidence            3444678999999999999999999999987899999998876554 456641 11 1 1   0         0127999


Q ss_pred             EEECCCCHHH-------HHHHHHHhccCCceEEEEcc
Q 017335          277 CFECIGLTSV-------MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       277 vid~~g~~~~-------~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ||+|++....       .......++++ ..++++-.
T Consensus       179 vInaTp~gm~~~~~~~~~~~~~~~l~~~-~~v~DlvY  214 (271)
T 1npy_A          179 LVNVTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  214 (271)
T ss_dssp             EEECSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             EEECCCCCccCccccCCCCCCHHHcCCC-CEEEEeec
Confidence            9999986431       01113456775 77888754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.07  E-value=0.026  Score=51.11  Aligned_cols=81  Identities=21%  Similarity=0.183  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhHHHH----HHHcCCce-EEcCCCCCCccHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEI----GKKFGITD-FINPATCGDKTVS  263 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~----~~~lga~~-vi~~~~~~~~~~~  263 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++            .++.+.    +++.|... .+..+-....++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999998 8999999999999999 89999986            333322    23345332 2222211112233


Q ss_pred             HHHHHhcC--CCccEEEECCCC
Q 017335          264 QVIKEMTD--GGADYCFECIGL  283 (373)
Q Consensus       264 ~~i~~~~~--~~~d~vid~~g~  283 (373)
                      +.+.+...  +++|+++++.|.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCC
Confidence            33332221  379999998873

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.06  E-value=0.019  Score=52.06  Aligned_cols=81  Identities=20%  Similarity=0.295  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC---c-eEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI---T-DFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga---~-~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.   . ..+..+-....++.+.+.+... 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999998 8999999999989999 9999999987765542    2332   1 1222221111233333333322 


Q ss_pred             -CCccEEEECCCC
Q 017335          272 -GGADYCFECIGL  283 (373)
Q Consensus       272 -~~~d~vid~~g~  283 (373)
                       +++|+++++.|.
T Consensus        89 ~g~id~lv~nAg~  101 (281)
T 3svt_A           89 HGRLHGVVHCAGG  101 (281)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999998884

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.06  E-value=0.011  Score=51.81  Aligned_cols=99  Identities=17%  Similarity=0.215  Sum_probs=70.2

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----CceEEcCCCCCCccHHHHHHHh
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----ITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----a~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.+...++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++..    .-.++..+.      .+   ..
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~------~~---~~  129 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG------TL---GY  129 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG------GG---CC
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc------cc---cc
Confidence            45666788999999999986 88888888875 4 9999999999888887532    122333222      11   01


Q ss_pred             c-CCCccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          270 T-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      . .+.+|+|+.........+.+.+.|+++ |+++..-
T Consensus       130 ~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~  165 (231)
T 1vbf_A          130 EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPI  165 (231)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             ccCCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEE
Confidence            1 237999997665444456788999997 9988764

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.06  E-value=0.035  Score=51.54  Aligned_cols=97  Identities=12%  Similarity=0.058  Sum_probs=61.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC---hhHHHHHH-Hc----CCc-eEEcCCCCCCccHHHHHHHhcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---PEKFEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~~-~l----ga~-~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      .++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+. ++    +.. .++..++     . +.+.+.. .
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~-----~-~~l~~~l-~  225 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED-----H-EQLRKEI-A  225 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-----H-HHHHHHH-H
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch-----H-HHHHhhh-c
Confidence            68899999999999999999999999889999999   66655442 22    221 2333322     1 1122211 1


Q ss_pred             CccEEEECCCCHHHH-----HH-HHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLTSVM-----ND-AFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~~~~-----~~-~~~~l~~~~G~~v~~G~  306 (373)
                      .+|+||+|++....-     .. ....++++ ..++++-.
T Consensus       226 ~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~-~~V~DlvY  264 (315)
T 3tnl_A          226 ESVIFTNATGVGMKPFEGETLLPSADMLRPE-LIVSDVVY  264 (315)
T ss_dssp             TCSEEEECSSTTSTTSTTCCSCCCGGGCCTT-CEEEESCC
T ss_pred             CCCEEEECccCCCCCCCCCCCCCcHHHcCCC-CEEEEecc
Confidence            699999998743200     01 23456675 66777744

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.05  E-value=0.014  Score=51.50  Aligned_cols=79  Identities=16%  Similarity=0.253  Sum_probs=52.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCC--CCeEEEEcCChhHHHHHHHc-CCc-eEEcCCCCCCccHHHHHHH---hcCC-C
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKKF-GIT-DFINPATCGDKTVSQVIKE---MTDG-G  273 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G--~~~Vi~~~~~~~~~~~~~~l-ga~-~vi~~~~~~~~~~~~~i~~---~~~~-~  273 (373)
                      +++|||+|+ |++|...++.+...|  + +|++++++.++.+.++++ +.. +++..+-....++.+.+.+   ..+. +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            578999998 999999999988899  7 999999998887766655 222 2222222111222222222   2221 6


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|.+.|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999876

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.05  E-value=0.022  Score=50.44  Aligned_cols=100  Identities=18%  Similarity=0.255  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhc
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++++||-+|+|. |..++.+++.+. -.+|++++.+++..+.+++    .|..   .++.      .+..+.+..+.
T Consensus        67 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~------gda~~~l~~l~  139 (237)
T 3c3y_A           67 KLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE------SDAMLALDNLL  139 (237)
T ss_dssp             HHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHHH
T ss_pred             HhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHHHH
Confidence            345678999999876 778888888863 2399999999988877754    3542   2332      23333333331


Q ss_pred             -----CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          271 -----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 -----~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                           .+.||+||-....   ...++.+.+.|++| |.++.-..
T Consensus       140 ~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~~  182 (237)
T 3c3y_A          140 QGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDNT  182 (237)
T ss_dssp             HSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECT
T ss_pred             hccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEecC
Confidence                 3479999944332   34578889999997 99886543

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.05  E-value=0.034  Score=50.39  Aligned_cols=94  Identities=12%  Similarity=-0.032  Sum_probs=62.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+++++|+|+|++|.+++..+...|. +|++++++.++.+.+ ++++...-++..+  ..+    +.+   +.+|+++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~----~~~---~~~DivVn~  187 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS--MDE----LEG---HEFDLIINA  187 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC--SGG----GTT---CCCSEEEEC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec--HHH----hcc---CCCCEEEEC
Confidence            67899999999999999999999997 999999998886554 4454310011111  011    111   479999999


Q ss_pred             CCCHHHHH---HHHHHhccCCceEEEEcc
Q 017335          281 IGLTSVMN---DAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~~~---~~~~~l~~~~G~~v~~G~  306 (373)
                      ++....-+   .-...++++ ..++++..
T Consensus       188 t~~~~~~~~~~i~~~~l~~~-~~v~D~~y  215 (271)
T 1nyt_A          188 TSSGISGDIPAIPSSLIHPG-IYCYDMFY  215 (271)
T ss_dssp             CSCGGGTCCCCCCGGGCCTT-CEEEESCC
T ss_pred             CCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            99765200   012345665 67777765

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.05  E-value=0.011  Score=53.40  Aligned_cols=103  Identities=12%  Similarity=0.064  Sum_probs=65.9

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      +.....+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.-....+..+-   .++.........+.
T Consensus        37 il~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~---~~~~~~~~~~~~~~  110 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDL---LDITAEIPKELAGH  110 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEE---CCTTSCCCGGGTTC
T ss_pred             HHHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeee---eecccccccccCCC
Confidence            44566789999999999986 8888888875 77 9999999999999887633221111110   00000000011247


Q ss_pred             ccEEEECCC-----C---HHHHHHHHHHhccCCceEEEE
Q 017335          274 ADYCFECIG-----L---TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       274 ~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ||+|+.+..     .   ...+..+.+.+ +| |++++.
T Consensus       111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            999995432     1   12467777888 97 998754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.05  E-value=0.021  Score=51.74  Aligned_cols=80  Identities=14%  Similarity=0.120  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-H----cCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K----FGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~----lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +    .|... .+..+-....++.+.+.+...  +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 9999999987654432 2    24322 222222111223333333222  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|+++++.|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.05  E-value=0.018  Score=51.10  Aligned_cols=81  Identities=21%  Similarity=0.273  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+    ++.+.. ..+..+-....++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999998 9999999999999999 8999988 76665443    223432 2222221111233333332221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 2uvd_A           82 QVDILVNNAGV   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.05  E-value=0.019  Score=51.39  Aligned_cols=80  Identities=13%  Similarity=0.121  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .+..+-....++.+.+.+...  ++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999999999 9999999987655432    234321 222221011223232322211  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus        92 iD~lv~~Ag  100 (260)
T 2zat_A           92 VDILVSNAA  100 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999877

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.04  E-value=0.021  Score=50.50  Aligned_cols=79  Identities=16%  Similarity=0.230  Sum_probs=51.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l----ga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      ++++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++    +.. .++..+-....++.+.+.+...  ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999998 9999999998888999 9999999987766543 22    221 2222222111233333332221  37


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus        81 id~li~~Ag   89 (250)
T 2cfc_A           81 IDVLVNNAG   89 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.03  E-value=0.013  Score=54.97  Aligned_cols=97  Identities=19%  Similarity=0.242  Sum_probs=67.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc------CC----ceEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF------GI----TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l------ga----~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.      |.    -+++.      .+..+.+...
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~------~D~~~~l~~~  190 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNA  190 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTS
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE------CCHHHHHHhc
Confidence            45678999999876 66777888876545999999999988887652      11    12332      2344434333


Q ss_pred             cCCCccEEEECCC----------CHHHHHHHHHHhccCCceEEEE
Q 017335          270 TDGGADYCFECIG----------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       270 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .++.||+|+-...          ....+..+.+.|+++ |.++.-
T Consensus       191 ~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          191 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            3348999994322          245688999999997 999875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.02  E-value=0.017  Score=52.49  Aligned_cols=79  Identities=18%  Similarity=0.124  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccH---HHHHHHhcCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTV---SQVIKEMTDG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~---~~~i~~~~~~  272 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.    +.+.. ..+..+-....++   .+.+.+.  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            5789999998 8999999999999999 9999999887654432    23432 2222221111222   2333333  5


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999883

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.02  E-value=0.026  Score=51.66  Aligned_cols=80  Identities=14%  Similarity=0.155  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---------cCCc-eEEcCCCCCCccHHHHHHHhc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---------FGIT-DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---------lga~-~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+         .+.. .++..+-....++.+.+.+..
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4689999998 9999999999989999 99999999877654422         1322 222222111122333333322


Q ss_pred             C--CCccEEEECCC
Q 017335          271 D--GGADYCFECIG  282 (373)
Q Consensus       271 ~--~~~d~vid~~g  282 (373)
                      .  +++|++|++.|
T Consensus        96 ~~~g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            1  37999999887

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.02  E-value=0.018  Score=54.31  Aligned_cols=79  Identities=22%  Similarity=0.227  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-----------HHHHHHcCCce-EE--cCCCCCCccHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-----------FEIGKKFGITD-FI--NPATCGDKTVSQVI  266 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-----------~~~~~~lga~~-vi--~~~~~~~~~~~~~i  266 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++           .+.+++.|... .+  |-.+  .+++.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~  120 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD--EQQISAAV  120 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHH
Confidence            5789999998 8999999999989999 99999988763           23334455432 22  2222  12333333


Q ss_pred             HHhcC--CCccEEEECCCC
Q 017335          267 KEMTD--GGADYCFECIGL  283 (373)
Q Consensus       267 ~~~~~--~~~d~vid~~g~  283 (373)
                      .+...  +++|++|++.|.
T Consensus       121 ~~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            33322  379999999884

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.01  E-value=0.016  Score=52.68  Aligned_cols=77  Identities=18%  Similarity=0.215  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc--eEEcCCCCCCc-cHHHHHHHhc--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT--DFINPATCGDK-TVSQVIKEMT--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~--~vi~~~~~~~~-~~~~~i~~~~--~  271 (373)
                      .+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|..  +++..+- .+. ++.+.+.+..  .
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-EDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCC-CCHHHHHHHHHHHHHHc
Confidence            3689999998 9999999999888999 9999999988766543    23432  2222222 112 2222222221  1


Q ss_pred             CCccEEEEC
Q 017335          272 GGADYCFEC  280 (373)
Q Consensus       272 ~~~d~vid~  280 (373)
                      +++|++|++
T Consensus       105 g~iD~li~n  113 (286)
T 1xu9_A          105 GGLDMLILN  113 (286)
T ss_dssp             TSCSEEEEC
T ss_pred             CCCCEEEEC
Confidence            379999988

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.01  E-value=0.018  Score=52.24  Aligned_cols=80  Identities=19%  Similarity=0.214  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---c-eEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---T-DFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~-~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.   . .++..+-...+++.+.+.+... 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4689999998 8999999999989999 99999999877655432    232   1 2222222111223233332221 


Q ss_pred             -CCccEEEECCC
Q 017335          272 -GGADYCFECIG  282 (373)
Q Consensus       272 -~~~d~vid~~g  282 (373)
                       +++|++|++.|
T Consensus        84 ~g~iD~lv~nAg   95 (280)
T 1xkq_A           84 FGKIDVLVNNAG   95 (280)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999887

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.00  E-value=0.018  Score=51.69  Aligned_cols=81  Identities=20%  Similarity=0.303  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-C-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c---C-C-ceEEcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---G-I-TDFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l---g-a-~~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+.+.+ +   + . -+++..+-....++.+.+.+...  
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4789999998 7 799999998888999 89999999887655432 2   2 1 12222222111233333333222  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +.+|++|++.|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            379999999883

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.00  E-value=0.028  Score=52.40  Aligned_cols=89  Identities=18%  Similarity=0.216  Sum_probs=62.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.++ +.++ ..++++|+. ..       .++.+.+.     ..|+|+.+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~-~~-------~~l~ell~-----~aDvVil~  209 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQAT-FH-------DSLDSLLS-----VSQFFSLN  209 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCE-EC-------SSHHHHHH-----HCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcE-Ec-------CCHHHHHh-----hCCEEEEe
Confidence            57899999999999999999999999 9999998 7766 355667763 11       12222221     47888887


Q ss_pred             CCCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          281 IGLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      +....    .+ ...+..++++ +.++.++.
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            76432    12 3456778886 77777764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.99  E-value=0.024  Score=50.71  Aligned_cols=80  Identities=19%  Similarity=0.106  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCc-cHHHHHH---HhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDK-TVSQVIK---EMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~-~~~~~i~---~~~~  271 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+.. .++..+- .+. ++.+.+.   +..+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-SLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCC-CCHHHHHHHHHHHHHHhC
Confidence            4689999998 9999999999989999 9999999887655432    23432 2222222 112 2222222   2222


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|++|++.|.
T Consensus        91 ~~id~li~~Ag~  102 (266)
T 1xq1_A           91 GKLDILINNLGA  102 (266)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCCcEEEECCCC
Confidence            579999998874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.98  E-value=0.03  Score=50.65  Aligned_cols=81  Identities=23%  Similarity=0.283  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhHHHHH----HHcCCce-EEcCCCCCCccHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEIG----KKFGITD-FINPATCGDKTVS  263 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~~----~~lga~~-vi~~~~~~~~~~~  263 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++            +++.+.+    +..+... .+..+-....++.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999998 8999999999999999 89999876            4443332    3344332 2222221112333


Q ss_pred             HHHHHhcC--CCccEEEECCCC
Q 017335          264 QVIKEMTD--GGADYCFECIGL  283 (373)
Q Consensus       264 ~~i~~~~~--~~~d~vid~~g~  283 (373)
                      +.+.+...  +++|++|++.|.
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33333222  379999999874

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.98  E-value=0.056  Score=50.30  Aligned_cols=76  Identities=20%  Similarity=0.218  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh----HHHHHHHc------CCceEEcCCCCCCccHHHHHHHhc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKF------GITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~----~~~~~~~l------ga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .+.+|||+|+ |.+|...++.+...|. +|++++++..    ..+.++..      ..-.++..+-   .+ .+.+.+..
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI---RD-LTTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT---TC-HHHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC---CC-HHHHHHHh
Confidence            3679999998 9999999999999998 9999998543    33333332      2223333332   11 12334443


Q ss_pred             CCCccEEEECCCC
Q 017335          271 DGGADYCFECIGL  283 (373)
Q Consensus       271 ~~~~d~vid~~g~  283 (373)
                      . ++|+||.+.+.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            3 79999999884

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.98  E-value=0.044  Score=50.88  Aligned_cols=133  Identities=11%  Similarity=0.124  Sum_probs=77.6

Q ss_pred             EEEEECCChHHHHH-HHHHHHCCCCeEE-EEcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          205 TVAIFGLGAVGLAV-AEGARLNRASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       205 ~VlI~G~G~vG~~a-~~la~~~G~~~Vi-~~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +|.|+|+|.+|... +..++..+. +++ +.++++++.+. ++++|...++       .++.+.+.   ...+|+|+.++
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~-~~vav~d~~~~~~~~~~~~~g~~~~~-------~~~~~~l~---~~~~D~V~i~t   70 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGG-EVVSMMSTSAERGAAYATENGIGKSV-------TSVEELVG---DPDVDAVYVST   70 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTC-EEEEEECSCHHHHHHHHHHTTCSCCB-------SCHHHHHT---CTTCCEEEECS
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCC-eEEEEECCCHHHHHHHHHHcCCCccc-------CCHHHHhc---CCCCCEEEEeC
Confidence            68899999999875 544434777 655 56778777655 4556754232       23322221   12799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCC
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVH  352 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i  352 (373)
                      ......+.+..+++.  |+-+++..+.....-. .....+..  +..+.-..  .......+..+.+++++|+|
T Consensus        71 p~~~h~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~--~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           71 TNELHREQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNH--HLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--CGGGSHHHHHHHHHHHTTTT
T ss_pred             ChhHhHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEee--hhhcCHHHHHHHHHHHcCCC
Confidence            977767788888887  4545554321110000 01111222  44443221  22223568888899999876

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.98  E-value=0.028  Score=50.40  Aligned_cols=95  Identities=12%  Similarity=0.008  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC----------------------ceEEcCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI----------------------TDFINPA  255 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga----------------------~~vi~~~  255 (373)
                      ...++.+||.+|+|. |..+..+++. |+ +|+++|.++...+.+++ .+.                      -.++..+
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  141 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS  141 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence            456889999999976 7777777765 88 99999999999888854 321                      0122221


Q ss_pred             CCCCccHHHHHHHhcC-CCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEc
Q 017335          256 TCGDKTVSQVIKEMTD-GGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~-~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      -   .++     .... +.||+|++...-        ...+..+.+.|++| |+++++.
T Consensus       142 ~---~~l-----~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          142 I---FDL-----PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             T---TTG-----GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             c---ccC-----CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence            1   111     1112 479999975321        23577888999997 9986543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.97  E-value=0.015  Score=52.05  Aligned_cols=81  Identities=12%  Similarity=0.151  Sum_probs=51.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCC---CCeEEEEcCChhHHHHHHHc---CCc-eEEcCCCCCCccHHHHHHHh---
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNR---ASKIIGVDINPEKFEIGKKF---GIT-DFINPATCGDKTVSQVIKEM---  269 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G---~~~Vi~~~~~~~~~~~~~~l---ga~-~vi~~~~~~~~~~~~~i~~~---  269 (373)
                      ..+.+|||+|+ |++|.+.++.+...|   + +|++++++.++.+.++++   +.. .++..+-...+++.+.+.+.   
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            34679999998 999999999988889   7 999999987654444332   322 22222221123333333332   


Q ss_pred             cCC-CccEEEECCC
Q 017335          270 TDG-GADYCFECIG  282 (373)
Q Consensus       270 ~~~-~~d~vid~~g  282 (373)
                      .+. ++|++|.+.|
T Consensus        98 ~g~~~id~li~~Ag  111 (267)
T 1sny_A           98 TKDQGLNVLFNNAG  111 (267)
T ss_dssp             HGGGCCSEEEECCC
T ss_pred             cCCCCccEEEECCC
Confidence            222 6999999887

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=95.96  E-value=0.031  Score=51.27  Aligned_cols=80  Identities=16%  Similarity=0.160  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhHHHH----HHHcCCce-EEcCCCCCCccHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEI----GKKFGITD-FINPATCGDKTVS  263 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~----~~~lga~~-vi~~~~~~~~~~~  263 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++            +++.+.    ++..|... .+..+-....++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            5789999998 8999999999999999 99999876            444333    23345432 2222211112233


Q ss_pred             HHHHHhcC--CCccEEEECCC
Q 017335          264 QVIKEMTD--GGADYCFECIG  282 (373)
Q Consensus       264 ~~i~~~~~--~~~d~vid~~g  282 (373)
                      +.+.+...  +++|++|++.|
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHhCCCCEEEECCC
Confidence            33333222  37999999877

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.96  E-value=0.03  Score=50.17  Aligned_cols=102  Identities=17%  Similarity=0.241  Sum_probs=70.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i  266 (373)
                      +.+...++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|.   ..++..+-   .++    
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDL----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccC----
Confidence            45667788999999999986 7788888888887 99999999988777754    232   22333222   111    


Q ss_pred             HHhcCCCccEEEECC-----C-CHHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFECI-----G-LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~~-----g-~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ...++.+|+|+..-     . ....+..+.+.|+++ |+++....
T Consensus       124 -~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 -PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             -CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             -CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence             11223799998432     1 234678889999997 99887653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.95  E-value=0.023  Score=50.99  Aligned_cols=80  Identities=14%  Similarity=0.135  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++ .+++++.+.+.    +.|... ++..+-....++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 88886 88877655543    234322 222222111223333333222  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|+++++.|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.94  E-value=0.11  Score=42.37  Aligned_cols=95  Identities=9%  Similarity=0.026  Sum_probs=60.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHHHH---cCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~~---lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      ..+|+|+|+|.+|...++.+...|. +|++++++ +++.+.++.   .|. .++..+. .+.+   .+.+..-.++|+|+
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~-~~~~---~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNA-DVIPGDS-NDSS---VLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTC-EEEESCT-TSHH---HHHHHTTTTCSEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCC-eEEEcCC-CCHH---HHHHcChhhCCEEE
Confidence            4679999999999999999999998 89999987 455554442   244 3443333 1122   23333223799999


Q ss_pred             ECCCCHHH---HHHHHHHhccCCceEEEE
Q 017335          279 ECIGLTSV---MNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       279 d~~g~~~~---~~~~~~~l~~~~G~~v~~  304 (373)
                      -+++....   +....+.+.+. .+++..
T Consensus        77 ~~~~~d~~n~~~~~~a~~~~~~-~~ii~~  104 (153)
T 1id1_A           77 ALSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             ECSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             EecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            99997652   22233344443 566554

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.94  E-value=0.024  Score=50.67  Aligned_cols=80  Identities=16%  Similarity=0.216  Sum_probs=50.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH--HHHH-HH---cCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIG-KK---FGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~-~~---lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++  .+.+ ++   .+.. ..+..+-...+++.+.+.+...  +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999998 8999999888888899 89999988776  4433 22   2432 2222221111223333332221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        81 ~iD~lv~nAg~   91 (258)
T 3a28_C           81 GFDVLVNNAGI   91 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.94  E-value=0.021  Score=52.09  Aligned_cols=80  Identities=24%  Similarity=0.273  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-----------HHHHHHcCCce-EEcCCCCCCc-cHHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-----------FEIGKKFGITD-FINPATCGDK-TVSQVIK  267 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-----------~~~~~~lga~~-vi~~~~~~~~-~~~~~i~  267 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++           .+.+++.+... .+..+- .+. ++.+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~   85 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDI-RDGDAVAAAVA   85 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHH
Confidence            4789999998 8999999999988999 99999988752           22233445322 221121 112 2333333


Q ss_pred             HhcC--CCccEEEECCCC
Q 017335          268 EMTD--GGADYCFECIGL  283 (373)
Q Consensus       268 ~~~~--~~~d~vid~~g~  283 (373)
                      +...  +++|++|++.|.
T Consensus        86 ~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHSCCSEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            3222  379999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.94  E-value=0.026  Score=50.38  Aligned_cols=80  Identities=16%  Similarity=0.212  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH--HHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d  275 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++  .+.+++.|... ++..+-...+++.+.+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3678999998 9999999999989999 99999987652  12223334322 222221111223333332221  3799


Q ss_pred             EEEECCC
Q 017335          276 YCFECIG  282 (373)
Q Consensus       276 ~vid~~g  282 (373)
                      ++|++.|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.93  E-value=0.029  Score=50.82  Aligned_cols=80  Identities=21%  Similarity=0.265  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-------------ChhHHHHHH----HcCCce-EE--cCCCCCC
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-------------NPEKFEIGK----KFGITD-FI--NPATCGD  259 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-------------~~~~~~~~~----~lga~~-vi--~~~~~~~  259 (373)
                      -.++++||+|+ |++|.+.++.+...|+ +|+++++             ++++.+.+.    +.|... .+  |-.+  .
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~   89 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD--D   89 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--H
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--H
Confidence            46789999998 8999999999999999 9999987             455544432    234322 22  2222  1


Q ss_pred             ccHHHHHHHhcC--CCccEEEECCCC
Q 017335          260 KTVSQVIKEMTD--GGADYCFECIGL  283 (373)
Q Consensus       260 ~~~~~~i~~~~~--~~~d~vid~~g~  283 (373)
                      .++.+.+.+...  +++|+++++.|.
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            223333332221  379999999874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.93  E-value=0.016  Score=51.40  Aligned_cols=81  Identities=23%  Similarity=0.239  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .+++|||+|+ |++|...+..+...|+ +|++++++ +++.+.+.    ..+.. +++..+-...+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 9999999998888999 89999988 66554432    22432 2222222111233333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.93  E-value=0.01  Score=52.41  Aligned_cols=96  Identities=14%  Similarity=0.128  Sum_probs=61.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+|||+|+ |.+|...++.+...| + +|+++++++++...+...++. ++..+- .+.+   .+.+... ++|+||.+.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl-~d~~---~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDV-LNHA---ALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCT-TCHH---HHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecC-CCHH---HHHHHhc-CCCEEEEcC
Confidence            58999998 999999999999999 7 999999998765433222222 222222 1122   2333322 689999888


Q ss_pred             CCHH---HHHHHHHHhccC-CceEEEEcc
Q 017335          282 GLTS---VMNDAFNSSREG-WGKTVILGV  306 (373)
Q Consensus       282 g~~~---~~~~~~~~l~~~-~G~~v~~G~  306 (373)
                      +...   ....+++.++.. .++++.++.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence            8643   234455656542 158888875

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.92  E-value=0.027  Score=51.24  Aligned_cols=96  Identities=19%  Similarity=0.120  Sum_probs=66.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CC----ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GI----TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga----~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++ +     +.    -+++..+.      .+.+.. .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~------~~~l~~-~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG------FMHIAK-S  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS------HHHHHT-C
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcH------HHHHhh-C
Confidence            3568999999875 6677778877676699999999998888765 2     11    13333332      222332 2


Q ss_pred             CCCccEEEECCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFECIGL----------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.+|+|+-....          ...+..+.+.|+++ |.++...
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            3489999943321          45688999999997 9998764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.92  E-value=0.07  Score=46.94  Aligned_cols=94  Identities=13%  Similarity=0.113  Sum_probs=60.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+.+|||+|+|.+|...+..+...|+ +|++++.+.. ....+.+.|.-..+. +.+.+.+       +  .++|+||-+
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~d-------L--~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKR-KKVGEED-------L--LNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGGG-------S--SSCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHhH-------h--CCCCEEEEC
Confidence            47899999999999999999999999 8888876542 233333334223332 2211111       1  279999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      ++.+. .+..+...+.. |..|..-..+
T Consensus        99 T~d~~-~N~~I~~~ak~-gi~VNvvD~p  124 (223)
T 3dfz_A           99 TNDQA-VNKFVKQHIKN-DQLVNMASSF  124 (223)
T ss_dssp             CCCTH-HHHHHHHHSCT-TCEEEC----
T ss_pred             CCCHH-HHHHHHHHHhC-CCEEEEeCCc
Confidence            99988 55555555556 8887765433

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.91  E-value=0.016  Score=52.33  Aligned_cols=80  Identities=10%  Similarity=0.200  Sum_probs=49.9

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHHH-HHcCCc-eEEcCCCCCCccHHHHHHH---hcC-
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEK-FEIG-KKFGIT-DFINPATCGDKTVSQVIKE---MTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~-~~lga~-~vi~~~~~~~~~~~~~i~~---~~~-  271 (373)
                      .++++||+|+   |++|.+.++.+...|+ +|+++++++++ .+.+ ++++.. ..+..+-...+++.+.+.+   ..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999984   7999999999989999 89999988765 2333 344422 1222221011222222222   222 


Q ss_pred             -CCccEEEECCC
Q 017335          272 -GGADYCFECIG  282 (373)
Q Consensus       272 -~~~d~vid~~g  282 (373)
                       +++|++|++.|
T Consensus        85 ~~~iD~lv~nAg   96 (269)
T 2h7i_A           85 GNKLDGVVHSIG   96 (269)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence             17999999877

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.91  E-value=0.03  Score=50.86  Aligned_cols=34  Identities=29%  Similarity=0.277  Sum_probs=30.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            5789999998 8999999999999999 99999876

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.91  E-value=0.0054  Score=55.51  Aligned_cols=94  Identities=21%  Similarity=0.316  Sum_probs=65.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC---CCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLN---RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~---G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +++|.+||-+|+|. |..+..+++..   |+ +|+++|.+++-.+.+++    .+..   .++..+-          .++
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~----------~~~  135 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI----------RDI  135 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT----------TTC
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc----------ccc
Confidence            78999999999976 77788888864   56 89999999988887764    2321   2232221          223


Q ss_pred             cCCCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..+.+|+|+-...-        ...+..+.+.|+|| |++++.-.
T Consensus       136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            23478888853321        23578899999997 99987643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.91  E-value=0.023  Score=51.72  Aligned_cols=81  Identities=14%  Similarity=0.197  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... ++..+-...+++.+.+.+..  .++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3679999998 9999999998888899 8999998877655432    224322 22222211123333333321  237


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|++|++.|.
T Consensus       122 id~li~~Ag~  131 (285)
T 2c07_A          122 VDILVNNAGI  131 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.90  E-value=0.026  Score=48.16  Aligned_cols=62  Identities=18%  Similarity=0.348  Sum_probs=42.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +|||+|+ |.+|...++.+. .|+ +|++++++++          ....|-.+  .+++.+.+.+.  +++|++|.+.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN--IDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC--HHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC--HHHHHHHHHHh--CCCCEEEECCC
Confidence            7999998 999999998888 898 9999998764          11222222  12233333333  46899999877

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.90  E-value=0.021  Score=51.82  Aligned_cols=79  Identities=14%  Similarity=0.099  Sum_probs=52.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC---ceEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI---TDFINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga---~~vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++..   -..+..+-...+++.+.+.+...  +.+|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            78999998 8999999999999999 9999999988766553 2321   12222222111233333433322  36899


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      +|++.|.
T Consensus       101 lvnnAG~  107 (272)
T 2nwq_A          101 LINNAGL  107 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998873

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.89  E-value=0.08  Score=49.53  Aligned_cols=133  Identities=8%  Similarity=0.078  Sum_probs=83.7

Q ss_pred             EEEEECCChHHHH-HHHHHHHC-CCCeEEE-EcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          205 TVAIFGLGAVGLA-VAEGARLN-RASKIIG-VDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       205 ~VlI~G~G~vG~~-a~~la~~~-G~~~Vi~-~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      +|.|+|+|.+|.. .+...+.. ++ +|++ .++++++.+. ++++|..+++       .++.+.+.   ...+|+|+-|
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y-------~d~~ell~---~~~iDaV~I~   93 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAF-------GSYEEMLA---SDVIDAVYIP   93 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEE-------SSHHHHHH---CSSCSEEEEC
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeee-------CCHHHHhc---CCCCCEEEEe
Confidence            7999999999975 45555554 67 6665 5667776554 5678877665       23433332   2379999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCcccc-CHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCC
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVH  352 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i  352 (373)
                      +....-.+.+..+|+.  |+=|++.-+.....-.. ......+  +..+.-..  .++....+.++.+++++|+|
T Consensus        94 tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~--~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           94 LPTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAY--MITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             CCCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEee--eeecCHHHHHhhHhhhcCCC
Confidence            9987778889999987  56677865332211111 1111222  44443222  22234678889999999887

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.89  E-value=0.016  Score=49.81  Aligned_cols=96  Identities=10%  Similarity=0.093  Sum_probs=65.7

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC----ceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----TDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga----~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ++++.+||.+|+|. |..+..+++. |..+|++++.+++..+.+++...    -.++..+.   .++     ...++.+|
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~-----~~~~~~fD  109 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKL-----DFPSASFD  109 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSC-----CSCSSCEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcC-----CCCCCccc
Confidence            57889999999976 7777777776 44489999999999888876421    12332222   111     12234799


Q ss_pred             EEEECCC---------------------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          276 YCFECIG---------------------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g---------------------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|+....                     ....+..+.+.|+++ |+++....
T Consensus       110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  160 (215)
T 2pxx_A          110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTS  160 (215)
T ss_dssp             EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             EEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeC
Confidence            9996321                     134577888999997 99988754

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.88  E-value=0.065  Score=48.52  Aligned_cols=90  Identities=23%  Similarity=0.297  Sum_probs=61.9

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcCC-CccEEEEC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDG-GADYCFEC  280 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~  280 (373)
                      .+|.|+|.|.+|.+.++.++..|.. +|++.++++++.+.+++.|... ... +.   .+       .. . .+|+|+.|
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~-~~---~~-------~~-~~~aDvVila   69 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT-SI---AK-------VE-DFSPDFVMLS   69 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES-CG---GG-------GG-GTCCSEEEEC
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC-CH---HH-------Hh-cCCCCEEEEc
Confidence            3689999999999999988888853 6999999999988888888642 221 11   11       11 2 58999999


Q ss_pred             CCCHHH---HHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTSV---MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~---~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.....   +..+...++++ ..++.++.
T Consensus        70 vp~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CCHHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            986552   22333456665 66666543

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.88  E-value=0.049  Score=44.71  Aligned_cols=103  Identities=18%  Similarity=0.140  Sum_probs=65.6

Q ss_pred             HHhC-CCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC-C
Q 017335          196 KVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD-G  272 (373)
Q Consensus       196 ~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~-~  272 (373)
                      +... ++++++||.+|+|. |..+..+++..|. .++++++.++ ..+.    ....++..+. ......+.+....+ +
T Consensus        15 ~~~~~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~-~~~~~~~~~~~~~~~~   87 (180)
T 1ej0_A           15 QSDKLFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDF-RDELVMKALLERVGDS   87 (180)
T ss_dssp             HHHCCCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCT-TSHHHHHHHHHHHTTC
T ss_pred             HHhCCCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEccc-ccchhhhhhhccCCCC
Confidence            3334 78899999999987 8888888888642 3999999887 3221    2123333332 11222223333233 4


Q ss_pred             CccEEEEC-----CCC------------HHHHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFEC-----IGL------------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~-----~g~------------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+|+|+..     .+.            ...+..+.+.|+++ |+++....
T Consensus        88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  137 (180)
T 1ej0_A           88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVF  137 (180)
T ss_dssp             CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            89999972     333            35578889999997 99987654

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.87  E-value=0.017  Score=55.43  Aligned_cols=90  Identities=17%  Similarity=0.106  Sum_probs=63.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++..+.+..+++|+..+        .++.+    +. ...|+|+.++
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~--------~~l~e----ll-~~aDvV~l~~  255 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATRED----MY-PVCDVVTLNC  255 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHH----HG-GGCSEEEECS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec--------CCHHH----HH-hcCCEEEEec
Confidence            57899999999999999999999999 99999988766666666776421        11211    11 1578888776


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....    .+ ...+..|+++ ..++.++.
T Consensus       256 Plt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          256 PLHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            6321    12 3556677775 77776664

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.87  E-value=0.026  Score=51.59  Aligned_cols=91  Identities=10%  Similarity=-0.062  Sum_probs=61.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC---ceEEcCCCCCCccHHHHHHHhcCCCccEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga---~~vi~~~~~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      .+++++|+|+|++|.+.+..+...|+.+|+++.++.++.+.+ ++++.   ..+....+            +. ..+|+|
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------------l~-~~aDiI  191 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------------LK-QSYDVI  191 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CC-SCEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------------hc-CCCCEE
Confidence            688999999999999999999999977999999999886655 33442   12222111            11 379999


Q ss_pred             EECCCCHHHHHH---HHHHhccCCceEEEEcc
Q 017335          278 FECIGLTSVMND---AFNSSREGWGKTVILGV  306 (373)
Q Consensus       278 id~~g~~~~~~~---~~~~l~~~~G~~v~~G~  306 (373)
                      |+|++....-+.   -...++++ ..++++..
T Consensus       192 InaTp~gm~~~~~~l~~~~l~~~-~~V~DlvY  222 (281)
T 3o8q_A          192 INSTSASLDGELPAIDPVIFSSR-SVCYDMMY  222 (281)
T ss_dssp             EECSCCCC----CSCCGGGEEEE-EEEEESCC
T ss_pred             EEcCcCCCCCCCCCCCHHHhCcC-CEEEEecC
Confidence            999986431110   12456675 66677754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.87  E-value=0.023  Score=52.13  Aligned_cols=36  Identities=31%  Similarity=0.315  Sum_probs=32.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .+.+|+|+|+|++|..++..+...|+.++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457999999999999999999999999999999765

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.87  E-value=0.032  Score=54.78  Aligned_cols=95  Identities=17%  Similarity=0.111  Sum_probs=61.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .+.+|+|+|+|.+|.+++..+... |. +|++++++.++.+.+.+ .+... .++..+     .. .+.+... ++|+|+
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d-----~~-~l~~~l~-~~DvVI   93 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD-----DS-ALDKVLA-DNDVVI   93 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC-----HH-HHHHHHH-TSSEEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC-----HH-HHHHHHc-CCCEEE
Confidence            356899999999999988888877 67 89999999888766543 34322 222222     11 2222211 699999


Q ss_pred             ECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          279 ECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +|++..........++..+ -.++...
T Consensus        94 n~tp~~~~~~v~~a~l~~g-~~vvd~~  119 (467)
T 2axq_A           94 SLIPYTFHPNVVKSAIRTK-TDVVTSS  119 (467)
T ss_dssp             ECSCGGGHHHHHHHHHHHT-CEEEECS
T ss_pred             ECCchhhhHHHHHHHHhcC-CEEEEee
Confidence            9999654233444566775 6666553

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.87  E-value=0.043  Score=47.35  Aligned_cols=101  Identities=17%  Similarity=0.150  Sum_probs=69.6

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHh--cCC
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM--TDG  272 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~--~~~  272 (373)
                      .+.....++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...++..      ++.+ +...  ..+
T Consensus        45 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~------~~~~-~~~~~~~~~  114 (227)
T 3e8s_A           45 LLAILGRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHLA------SYAQ-LAEAKVPVG  114 (227)
T ss_dssp             HHHHHHTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEEC------CHHH-HHTTCSCCC
T ss_pred             HHHhhcCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccchh------hHHh-hcccccccC
Confidence            3444456779999999876 6677777766 77 99999999999999887654333322      2222 2111  233


Q ss_pred             -CccEEEECCC-----CHHHHHHHHHHhccCCceEEEEcc
Q 017335          273 -GADYCFECIG-----LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 -~~d~vid~~g-----~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       .+|+|+....     ....+..+.+.|+++ |+++....
T Consensus       115 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~~  153 (227)
T 3e8s_A          115 KDYDLICANFALLHQDIIELLSAMRTLLVPG-GALVIQTL  153 (227)
T ss_dssp             CCEEEEEEESCCCSSCCHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             CCccEEEECchhhhhhHHHHHHHHHHHhCCC-eEEEEEec
Confidence             5999996432     345688999999997 99887654

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.86  E-value=0.021  Score=53.07  Aligned_cols=96  Identities=19%  Similarity=0.139  Sum_probs=64.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC----------ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----------TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga----------~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.          -+++.      .+..+.+.. .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~------~D~~~~l~~-~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN-H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE------ChHHHHHHh-c
Confidence            4568999999876 6677778877654599999999998888876311          12222      234443433 3


Q ss_pred             CCCccEEEECCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFECIGL----------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.||+|+-....          ...+..+.+.|+++ |.++.-.
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            3489999943311          34578899999997 9988764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.86  E-value=0.01  Score=52.71  Aligned_cols=75  Identities=7%  Similarity=-0.075  Sum_probs=51.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-c--CChhHHHHHH-Hc-CCceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-D--INPEKFEIGK-KF-GITDFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~--~~~~~~~~~~-~l-ga~~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++ +  +++++.+.+. ++ +. .+.+...  ...+.+.+.+.. +++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~-g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK--PERLVDATLQHG-EAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC--GGGHHHHHGGGS-SCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH--HHHHHHHHHHHc-CCCCE
Confidence            468999998 8999999999999999 99999 6  8887766553 34 33 2333322  234444443332 37999


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      +|++.|
T Consensus        76 lv~~Ag   81 (244)
T 1zmo_A           76 IVSNDY   81 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.86  E-value=0.025  Score=52.64  Aligned_cols=94  Identities=15%  Similarity=0.155  Sum_probs=65.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHH-cCC-----ceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          204 STVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-FGI-----TDFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~-lga-----~~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++ ++.     -+++.      .+..+.+.+..++.||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~------~Da~~~l~~~~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV------DDARMVAESFTPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE------SCHHHHHHTCCTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE------CcHHHHHhhccCCCCCE
Confidence            3999999876 77778888854 66 99999999999998876 332     12332      23444444443458999


Q ss_pred             EEE-CCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          277 CFE-CIG---------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       277 vid-~~g---------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ||- ...         ....+..+.+.|+++ |.++..-.
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~~  201 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANCG  201 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEec
Confidence            984 221         145688999999997 99876543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.86  E-value=0.024  Score=51.14  Aligned_cols=81  Identities=19%  Similarity=0.237  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|++++++ ++..+.+    ++.+.. .++..+-....++.+.+.+...  +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999998 8999999998889999 89999884 4443333    334432 2333222112233333333322  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.86  E-value=0.026  Score=51.05  Aligned_cols=81  Identities=20%  Similarity=0.200  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-------HH----HHHHcCCce-EEcCCCCCCccHHHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FE----IGKKFGITD-FINPATCGDKTVSQVIKE  268 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-------~~----~~~~lga~~-vi~~~~~~~~~~~~~i~~  268 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++       .+    .++..+... .+..+-....++.+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4789999998 8999999999989999 99999988653       11    223334322 222221111223333333


Q ss_pred             hcC--CCccEEEECCCC
Q 017335          269 MTD--GGADYCFECIGL  283 (373)
Q Consensus       269 ~~~--~~~d~vid~~g~  283 (373)
                      ...  +++|+++++.|.
T Consensus        84 ~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCc
Confidence            222  379999999884

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.86  E-value=0.032  Score=51.23  Aligned_cols=95  Identities=19%  Similarity=0.251  Sum_probs=64.8

Q ss_pred             cchhhhhHHHHHHHHhCC-CCCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCc
Q 017335          183 LSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       183 l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~  260 (373)
                      +||....+.. +++...+ -.|.+++|+|.| .+|..++.++...|+ +|.++.+....+++                  
T Consensus       145 ~PcTp~gv~~-lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~l------------------  204 (300)
T 4a26_A          145 TPCTAKGVIV-LLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTEDM------------------  204 (300)
T ss_dssp             CCHHHHHHHH-HHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHHH------------------
T ss_pred             CCCCHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCchh------------------
Confidence            4544444444 3344443 589999999985 589999999999999 88888753221110                  


Q ss_pred             cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                        .+.++     .+|+||.++|.+..+.  -.+++++ ..++++|..
T Consensus       205 --~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          205 --IDYLR-----TADIVIAAMGQPGYVK--GEWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             --HHHHH-----TCSEEEECSCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred             --hhhhc-----cCCEEEECCCCCCCCc--HHhcCCC-cEEEEEecc
Confidence              01111     6899999999875333  2567997 999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.86  E-value=0.013  Score=52.25  Aligned_cols=75  Identities=17%  Similarity=0.199  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.  +  ...|-.+  .+++.+.+.+...  +++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~--~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999998 9999999999989999 9999998876543221  1  2233332  1223333332221  3789999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98873

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.84  E-value=0.024  Score=51.18  Aligned_cols=80  Identities=14%  Similarity=0.132  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-EEcCCCCCCc-cHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDK-TVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~lga~~-vi~~~~~~~~-~~~~~i~~~~~--  271 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+    ++.|... .+..+- .+. ++.+.+.+...  
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-SQESEVEALFAAVIERW  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 8888877 55544433    2334332 222222 122 23333333222  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.83  E-value=0.053  Score=47.45  Aligned_cols=101  Identities=13%  Similarity=0.219  Sum_probs=68.3

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc---eEEcCCCCCCccHHHHHHHhc
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT---DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~---~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      +.......++.+||-+|+|. |..+..+++. |..+|++++.+++..+.+++....   .++..+-   .++     ...
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~-----~~~  104 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADL---DKL-----HLP  104 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCG---GGC-----CCC
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcCh---hhc-----cCC
Confidence            44556667899999999876 6677777766 655899999999999888875422   2222221   111     112


Q ss_pred             CCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.+|+|+....      ....+..+.+.|+++ |+++..-
T Consensus       105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCceEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            237999996432      134578889999997 9988753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.80  E-value=0.06  Score=48.63  Aligned_cols=84  Identities=15%  Similarity=0.220  Sum_probs=59.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|.|+|+|.+|.+.+..+...|. +|+++++++++.+.+.+.|.. .+..       +.    .+.  .++|+||.|+..
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~-------~~----~~~--~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ-------DL----SLL--QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES-------CG----GGG--TTCSEEEECSCH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC-------CH----HHh--CCCCEEEEECCH
Confidence            68899999999999998888998 899999999998888877753 2221       11    112  368999999886


Q ss_pred             HHHHHHHHH----HhccCCceEEEE
Q 017335          284 TSVMNDAFN----SSREGWGKTVIL  304 (373)
Q Consensus       284 ~~~~~~~~~----~l~~~~G~~v~~  304 (373)
                      .. ....++    .++++ ..++.+
T Consensus        68 ~~-~~~~~~~l~~~~~~~-~~vv~~   90 (279)
T 2f1k_A           68 QL-ILPTLEKLIPHLSPT-AIVTDV   90 (279)
T ss_dssp             HH-HHHHHHHHGGGSCTT-CEEEEC
T ss_pred             HH-HHHHHHHHHhhCCCC-CEEEEC
Confidence            54 333333    34454 555555

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=95.80  E-value=0.058  Score=46.51  Aligned_cols=99  Identities=15%  Similarity=0.071  Sum_probs=67.3

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceEEcCCCCCCccHHHHHHHhcC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      +......+++.+||-+|+|. |..+..+++. +. +|++++.+++..+.+++.-.  -.++..+-   .++     .. .
T Consensus        37 ~l~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~---~~~-----~~-~  104 (220)
T 3hnr_A           37 ILEDVVNKSFGNVLEFGVGT-GNLTNKLLLA-GR-TVYGIEPSREMRMIAKEKLPKEFSITEGDF---LSF-----EV-P  104 (220)
T ss_dssp             HHHHHHHTCCSEEEEECCTT-SHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHSCTTCCEESCCS---SSC-----CC-C
T ss_pred             HHHHhhccCCCeEEEeCCCC-CHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHhCCCceEEEeCCh---hhc-----CC-C
Confidence            34444556899999999976 6677777776 77 99999999998888876422  22333332   111     01 1


Q ss_pred             CCccEEEECCC-----CHH---HHHHHHHHhccCCceEEEEc
Q 017335          272 GGADYCFECIG-----LTS---VMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       272 ~~~d~vid~~g-----~~~---~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +.+|+|+....     ...   .+..+.+.|+++ |.++...
T Consensus       105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  145 (220)
T 3hnr_A          105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG-GKIVFAD  145 (220)
T ss_dssp             SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            47999996432     111   588999999997 9988764

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.80  E-value=0.068  Score=50.20  Aligned_cols=134  Identities=14%  Similarity=0.142  Sum_probs=82.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHC--CCCeEE-EEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          204 STVAIFGLGAVGLAVAEGARLN--RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~--G~~~Vi-~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      -+|.|+|.|.+|...+..++..  ++ +++ +.++++++.+.+ +++|+ .++       .++.+.+.+   ..+|+|+.
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~~~~~~~-~~~-------~~~~~ll~~---~~~D~V~i   81 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRA-ELIDVCDIDPAALKAAVERTGA-RGH-------ASLTDMLAQ---TDADIVIL   81 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHHCC-EEE-------SCHHHHHHH---CCCSEEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCe-EEEEEEcCCHHHHHHHHHHcCC-cee-------CCHHHHhcC---CCCCEEEE
Confidence            4799999999998877777765  67 655 567788776654 56776 443       234333332   37999999


Q ss_pred             CCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          280 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      |+......+.+..++..  |+-+++..+.....-. ........  +..+.-..  ..+....+.++.+++++|+|-
T Consensus        82 ~tp~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  154 (354)
T 3q2i_A           82 TTPSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVK--QNRRNATLQLLKRAMQEKRFG  154 (354)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTTC
T ss_pred             CCCcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEE--cccCCHHHHHHHHHHhcCCCC
Confidence            99987767888888887  4556665422211000 01111222  44443221  222246788889999998873

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.78  E-value=0.044  Score=47.77  Aligned_cols=99  Identities=16%  Similarity=0.318  Sum_probs=67.8

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHHHhcC
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      ...++++++||-+|+|..|..+..+++..+. +|++++.+++..+.+++    .|. -.++..+.   ..+    ..+.+
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~----~~~~~  121 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GII----KGVVE  121 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CSS----TTTCC
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hhh----hhccc
Confidence            3457899999999999458888888887666 99999999988877753    342 23443331   001    11223


Q ss_pred             CCccEEEECCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335          272 GGADYCFECIGL-------------------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~~~d~vid~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.+|+|+-...-                         ...+..+.+.|+++ |+++++
T Consensus       122 ~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          122 GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            479999954210                         34577888899997 998875

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.77  E-value=0.033  Score=51.23  Aligned_cols=96  Identities=14%  Similarity=0.176  Sum_probs=63.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----------CceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----------ITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----------a~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-          .-.++.      .+..+.+.. .
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~-~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE------CcHHHHHhh-C
Confidence            3568999999876 667777887766559999999999888876521          112332      223222222 2


Q ss_pred             CCCccEEE-ECCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.||+|+ |....          ...+..+.+.|+++ |.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            34799999 43221          35678899999997 9998764

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.77  E-value=0.025  Score=51.49  Aligned_cols=94  Identities=18%  Similarity=0.246  Sum_probs=65.3

Q ss_pred             ccchhhhhHHHHHHHHhCC-CCCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+||....+.. +++...+ -.|++++|+|.| .+|..++.++...|+ +|.++.+.                   .   
T Consensus       140 ~~PcTp~gv~~-lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~-------------------t---  195 (285)
T 3l07_A          140 LESCTPKGIMT-MLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRF-------------------T---  195 (285)
T ss_dssp             CCCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---
T ss_pred             CCCCCHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC-------------------c---
Confidence            34544444444 3344443 489999999985 489999999999999 88777542                   1   


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .++.+.+     ..+|+||.++|.+..+  --+++++| ..++++|..
T Consensus       196 ~~L~~~~-----~~ADIVI~Avg~p~~I--~~~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          196 TDLKSHT-----TKADILIVAVGKPNFI--TADMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             SSHHHHH-----TTCSEEEECCCCTTCB--CGGGSCTT-CEEEECCCE
T ss_pred             hhHHHhc-----ccCCEEEECCCCCCCC--CHHHcCCC-cEEEEeccc
Confidence            2332222     2689999999987633  23568997 999999874

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.77  E-value=0.036  Score=52.30  Aligned_cols=90  Identities=19%  Similarity=0.299  Sum_probs=59.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      -.|.+|.|+|.|.+|...++.++ ..|. +|++.+++.++.+.++++|+..+   .     ++.+.+.     ..|+|+.
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~-----~l~ell~-----~aDvVil  226 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---D-----SLEELAR-----RSDCVSV  226 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---S-----SHHHHHH-----HCSEEEE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---C-----CHHHHhc-----cCCEEEE
Confidence            35789999999999999999999 9999 99999998776666666665321   1     1222121     3677776


Q ss_pred             CCCCHH----HH-HHHHHHhccCCceEEEEc
Q 017335          280 CIGLTS----VM-NDAFNSSREGWGKTVILG  305 (373)
Q Consensus       280 ~~g~~~----~~-~~~~~~l~~~~G~~v~~G  305 (373)
                      ++....    .+ ...+..++++ ..++.++
T Consensus       227 ~vp~~~~t~~li~~~~l~~mk~g-ailin~s  256 (348)
T 2w2k_A          227 SVPYMKLTHHLIDEAFFAAMKPG-SRIVNTA  256 (348)
T ss_dssp             CCCCSGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             eCCCChHHHHHhhHHHHhcCCCC-CEEEECC
Confidence            665321    11 2345566664 6555554

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.77  E-value=0.074  Score=49.25  Aligned_cols=100  Identities=17%  Similarity=0.259  Sum_probs=68.5

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~  268 (373)
                      ....++++++||-+|+|+ |..+.++++.++ ..+|++++.++.+.+.+++    +|..  .++..+.   .++.    .
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~~----~  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS---LHIG----E  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG---GGGG----G
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh---hhcc----c
Confidence            445789999999999876 667777888763 2399999999998877753    4642  3444332   2211    1


Q ss_pred             hcCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEEc
Q 017335          269 MTDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       269 ~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                       ..+.||+|+ |  |+|.                         ...+..+.+.|++| |+++...
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~st  246 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST  246 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEe
Confidence             134799998 4  4332                         24578899999997 9988754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.76  E-value=0.038  Score=49.96  Aligned_cols=81  Identities=22%  Similarity=0.192  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-------------ChhHHHHH----HHcCCce-EEcCCCCCCccH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-------------NPEKFEIG----KKFGITD-FINPATCGDKTV  262 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-------------~~~~~~~~----~~lga~~-vi~~~~~~~~~~  262 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++             +.++.+.+    +..+... .+..+-....++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999998 8999999999999999 9999987             44444333    2334322 222222111223


Q ss_pred             HHHHHHhcC--CCccEEEECCCC
Q 017335          263 SQVIKEMTD--GGADYCFECIGL  283 (373)
Q Consensus       263 ~~~i~~~~~--~~~d~vid~~g~  283 (373)
                      .+.+.+...  +++|+++++.|.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            333333222  379999998874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.76  E-value=0.03  Score=52.01  Aligned_cols=82  Identities=21%  Similarity=0.251  Sum_probs=51.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC----------hhHHHH----HHHcCCceEEcCCCCCCc-cHHH
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN----------PEKFEI----GKKFGITDFINPATCGDK-TVSQ  264 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~----------~~~~~~----~~~lga~~vi~~~~~~~~-~~~~  264 (373)
                      -.++++||+|+ |++|.+.++.+...|+ +|++++++          .++.+.    +++.|....+..-+..+. ++.+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35789999998 8999999998888999 99999876          333333    233454322222221222 2222


Q ss_pred             HHHHhcC--CCccEEEECCCC
Q 017335          265 VIKEMTD--GGADYCFECIGL  283 (373)
Q Consensus       265 ~i~~~~~--~~~d~vid~~g~  283 (373)
                      .+.+...  +++|++|++.|.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            2332222  379999998884

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.75  E-value=0.039  Score=47.99  Aligned_cols=95  Identities=16%  Similarity=0.263  Sum_probs=65.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-----------eEEcCCCCCCccHHHHHHH
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-----------DFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-----------~vi~~~~~~~~~~~~~i~~  268 (373)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++....           .++..+.   .++     .
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~---~~~-----~   96 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA---SSL-----S   96 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT---TSC-----C
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc---ccc-----C
Confidence            56899999999976 7777777776 77 999999999988888763211           2222222   111     1


Q ss_pred             hcCCCccEEEECCC-----C-H---HHHHHHHHHhccCCceEEEEcc
Q 017335          269 MTDGGADYCFECIG-----L-T---SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       269 ~~~~~~d~vid~~g-----~-~---~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ...+.+|+|+....     . .   ..+..+.+.|+++ |+++....
T Consensus        97 ~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  142 (235)
T 3sm3_A           97 FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG-AYLYLVEF  142 (235)
T ss_dssp             SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC-eEEEEEEC
Confidence            12237999995321     2 2   4688899999997 99988754

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.75  E-value=0.065  Score=50.34  Aligned_cols=92  Identities=10%  Similarity=0.155  Sum_probs=63.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      -.+|.|+|.|.+|...+..++..|. +|++.++++++.+.++++|+...        .+..+.+.+. ...+|+||-|+.
T Consensus         8 ~~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~--------~~~~e~~~~a-~~~aDlVilavP   77 (341)
T 3ktd_A            8 SRPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS--------ADLEATLQRA-AAEDALIVLAVP   77 (341)
T ss_dssp             SSCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE--------SCHHHHHHHH-HHTTCEEEECSC
T ss_pred             CCEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee--------CCHHHHHHhc-ccCCCEEEEeCC
Confidence            3579999999999999999999998 99999999999999988887422        1233333221 115789999888


Q ss_pred             CHHHHHHHHHH---hccCCceEEEEcc
Q 017335          283 LTSVMNDAFNS---SREGWGKTVILGV  306 (373)
Q Consensus       283 ~~~~~~~~~~~---l~~~~G~~v~~G~  306 (373)
                      ... +...++.   ++++ ..+++++.
T Consensus        78 ~~~-~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           78 MTA-IDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HHH-HHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HHH-HHHHHHHHHccCCC-CEEEEcCC
Confidence            544 3333322   3554 66666654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.74  E-value=0.017  Score=52.18  Aligned_cols=77  Identities=19%  Similarity=0.284  Sum_probs=49.7

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccHHHHHHHhcC--CCcc
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d  275 (373)
                      -..+++|||+|+ |++|.+.++.+...|+ +|+++++++++...    .+..+ .|-.+  .+++.+.+.+...  +++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----VSDHFKIDVTN--EEEVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----SSEEEECCTTC--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----ceeEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            456899999998 8999999999989999 99999988765411    11111 22222  1233333333222  3799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      ++|++.|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998874

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.73  E-value=0.058  Score=46.91  Aligned_cols=75  Identities=13%  Similarity=0.102  Sum_probs=55.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+. ..|.. ++..+.   .+ .+.+.+..-.++|+++-+++.
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~-~i~gd~---~~-~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKAT-IIHGDG---SH-KEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSE-EEESCT---TS-HHHHHHHTCCTTCEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCe-EEEcCC---CC-HHHHHhcCcccCCEEEEecCC
Confidence            48899999999999999999999 9999999999888765 45654 444433   11 222333322379999999998


Q ss_pred             HH
Q 017335          284 TS  285 (373)
Q Consensus       284 ~~  285 (373)
                      ..
T Consensus        76 d~   77 (218)
T 3l4b_C           76 DE   77 (218)
T ss_dssp             HH
T ss_pred             cH
Confidence            76

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.73  E-value=0.037  Score=49.63  Aligned_cols=80  Identities=15%  Similarity=0.189  Sum_probs=50.7

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+   |++|.+.++.+...|+ +|+++++++   +..+.+.+ .+..+++..+-...+++.+.+.+...  +
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999986   5899999999888999 899999876   33333322 34323332222111233333333333  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|++.|
T Consensus        87 ~iD~lv~~Ag   96 (265)
T 1qsg_A           87 KFDGFVHSIG   96 (265)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.73  E-value=0.042  Score=53.73  Aligned_cols=100  Identities=17%  Similarity=0.261  Sum_probs=66.3

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE  268 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~  268 (373)
                      ....+++|++||=+|+|+ |..++++|..++ ..+|+++|.++++.+.++    ++|...  +++.+      ..+ +..
T Consensus        99 ~~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~D------a~~-l~~  170 (456)
T 3m4x_A           99 TAAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHA------PAE-LVP  170 (456)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCC------HHH-HHH
T ss_pred             HHcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCC------HHH-hhh
Confidence            345688999999998865 555666666543 348999999999887764    467543  33322      221 222


Q ss_pred             hcCCCccEEE-E--CCCCH-------------------------HHHHHHHHHhccCCceEEEE
Q 017335          269 MTDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       269 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ..++.||+|+ |  |+|..                         ..+..+++.|++| |+++..
T Consensus       171 ~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYs  233 (456)
T 3m4x_A          171 HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYS  233 (456)
T ss_dssp             HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            2235899998 4  44432                         3477888999997 998754

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.73  E-value=0.056  Score=51.16  Aligned_cols=135  Identities=15%  Similarity=0.110  Sum_probs=82.0

Q ss_pred             CEEEEECCChHHHHHHHHHHH--------CCCCeEEE-EcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          204 STVAIFGLGAVGLAVAEGARL--------NRASKIIG-VDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~--------~G~~~Vi~-~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      =+|.|+|+|.+|...+...+.        -++ +|++ .++++++.+. ++++|...++       .++.+.+.+   ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y-------~d~~ell~~---~~   94 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERP-RLVHLAEANAGLAEARAGEFGFEKAT-------ADWRALIAD---PE   94 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCC-EEEEEECC--TTHHHHHHHHTCSEEE-------SCHHHHHHC---TT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCc-EEEEEECCCHHHHHHHHHHhCCCeec-------CCHHHHhcC---CC
Confidence            489999999999865544432        245 5555 5666666554 5678877665       234333322   37


Q ss_pred             ccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcC
Q 017335          274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDK  350 (373)
Q Consensus       274 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g  350 (373)
                      +|+|+-|+....-.+.+..+|+.  |+=|++.-+.....-. -......+  +..+.-..  .++....+.++.+++++|
T Consensus        95 iDaV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~--~~R~~p~~~~~k~~i~~G  170 (393)
T 4fb5_A           95 VDVVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALGY--NYIQNPVMRHIRKLVGDG  170 (393)
T ss_dssp             CCEEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECC--GGGGCHHHHHHHHHHHTT
T ss_pred             CcEEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCcccccc--ccccChHHHHHHHHHHcC
Confidence            99999999987778899999988  5667786532221000 01111222  44443222  223346788899999998


Q ss_pred             CCC
Q 017335          351 VHL  353 (373)
Q Consensus       351 ~i~  353 (373)
                      +|-
T Consensus       171 ~iG  173 (393)
T 4fb5_A          171 VIG  173 (393)
T ss_dssp             TTC
T ss_pred             CCc
Confidence            874

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.72  E-value=0.049  Score=49.61  Aligned_cols=73  Identities=16%  Similarity=0.191  Sum_probs=50.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+.. .       .+..+.+.     ..|+||.|+..+
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~-------~~~~~~~~-----~advvi~~v~~~   68 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQ-A-------SSPAEVCA-----ACDITIAMLADP   68 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEE-C-------SCHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c-------CCHHHHHH-----cCCEEEEEcCCH
Confidence            58899999999998888888898 8999999999988887776531 1       12222221     357777777665


Q ss_pred             HHHHHHH
Q 017335          285 SVMNDAF  291 (373)
Q Consensus       285 ~~~~~~~  291 (373)
                      ..+...+
T Consensus        69 ~~~~~v~   75 (287)
T 3pdu_A           69 AAAREVC   75 (287)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3344333

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.69  E-value=0.028  Score=51.24  Aligned_cols=94  Identities=21%  Similarity=0.210  Sum_probs=65.3

Q ss_pred             cchhhhhHHHHHHHHhCC-CCCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCc
Q 017335          183 LSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       183 l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~  260 (373)
                      +||....+.. +++...+ -.|++++|+|.| .+|..++.++...|+ +|.++.+..                      .
T Consensus       140 ~PcTp~gv~~-lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t----------------------~  195 (285)
T 3p2o_A          140 LPCTPLGVMK-LLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT----------------------K  195 (285)
T ss_dssp             CCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------S
T ss_pred             CCCCHHHHHH-HHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc----------------------h
Confidence            4444444444 3344443 489999999985 589999999999999 888876432                      2


Q ss_pred             cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      ++.+.+     ..+|+||.++|.+..+  --++++++ ..++++|...
T Consensus       196 ~L~~~~-----~~ADIVI~Avg~p~~I--~~~~vk~G-avVIDVgi~~  235 (285)
T 3p2o_A          196 DLSLYT-----RQADLIIVAAGCVNLL--RSDMVKEG-VIVVDVGINR  235 (285)
T ss_dssp             CHHHHH-----TTCSEEEECSSCTTCB--CGGGSCTT-EEEEECCCEE
T ss_pred             hHHHHh-----hcCCEEEECCCCCCcC--CHHHcCCC-eEEEEeccCc
Confidence            332222     2689999999987633  23568997 9999999753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.69  E-value=0.043  Score=50.11  Aligned_cols=81  Identities=21%  Similarity=0.167  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCC--CeEEEEcCChhHHHHHHH-c-----CCc-eEEcCCCCCCccHHHHHHHhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRA--SKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~--~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .++++||+|+ |++|.+.++.+...|+  .+|+.+++++++.+.+.+ +     +.. +++..+-...+++.+.+.+...
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999998 8999998776655554  289999999887766532 2     322 2222222122445555554433


Q ss_pred             --CCccEEEECCC
Q 017335          272 --GGADYCFECIG  282 (373)
Q Consensus       272 --~~~d~vid~~g  282 (373)
                        +++|++|++.|
T Consensus       112 ~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 EFKDIDILVNNAG  124 (287)
T ss_dssp             GGCSCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              37999999887

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.68  E-value=0.054  Score=50.71  Aligned_cols=87  Identities=20%  Similarity=0.418  Sum_probs=61.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+++.|+. .        .++.+.+.     ..|+|+.++
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~-~--------~~l~~~l~-----~aDvVil~v  212 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAE-F--------KPLEDLLR-----ESDFVVLAV  212 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCE-E--------CCHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCcc-c--------CCHHHHHh-----hCCEEEECC
Confidence            46799999999999999999999999 99999998877 555566652 1        12222221     468888777


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILG  305 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G  305 (373)
                      ....    .+ ...+..++++ ..++.++
T Consensus       213 p~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          213 PLTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            6433    12 3456677775 7777665

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.68  E-value=0.026  Score=50.12  Aligned_cols=96  Identities=20%  Similarity=0.239  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|.   -.++..+-   .++     ...+
T Consensus        43 ~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~~  112 (257)
T 3f4k_A           43 ELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM---DNL-----PFQN  112 (257)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----SSCT
T ss_pred             cCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhC-----CCCC
Confidence            578899999999987 8889999999887 99999999988877654    342   12333222   111     1122


Q ss_pred             CCccEEEEC-----CCCHHHHHHHHHHhccCCceEEEEc
Q 017335          272 GGADYCFEC-----IGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       272 ~~~d~vid~-----~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +.||+|+..     .+....+..+.+.|++| |+++...
T Consensus       113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          113 EELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            379999742     33345688899999997 9988775

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=95.68  E-value=0.041  Score=47.80  Aligned_cols=100  Identities=16%  Similarity=0.131  Sum_probs=63.6

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHH----HHHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE----IGKKFGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~----~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      ..++++++||=+|+|. |..+..+++..+..+|+++|.+++..+    .+++...-..+..+.   .+.. ..... .+.
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~---~~~~-~~~~~-~~~  126 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKPW-KYSGI-VEK  126 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCGG-GTTTT-CCC
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCC---CCch-hhccc-ccc
Confidence            4578999999999986 778888888875339999999987543    333332212222221   1110 00011 247


Q ss_pred             ccEEEECCCCHH----HHHHHHHHhccCCceEEEE
Q 017335          274 ADYCFECIGLTS----VMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       274 ~d~vid~~g~~~----~~~~~~~~l~~~~G~~v~~  304 (373)
                      ||+|+.......    .+..+.+.|++| |+++..
T Consensus       127 fD~V~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~i~  160 (210)
T 1nt2_A          127 VDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  160 (210)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eeEEEEeccChhHHHHHHHHHHHHhCCC-CEEEEE
Confidence            999996554321    257788999997 999877

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.66  E-value=0.036  Score=51.33  Aligned_cols=82  Identities=20%  Similarity=0.229  Sum_probs=51.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhHHHHH----HHcCCce-EEcCCCCCCccH
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEIG----KKFGITD-FINPATCGDKTV  262 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~------------~~~~~~~----~~lga~~-vi~~~~~~~~~~  262 (373)
                      -.++++||+|+ |++|.+.++.+...|+ +|++++++            .++.+.+    ++.|... .+..+-....++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            35789999998 8999999999999999 99998765            3433332    3345332 222221111233


Q ss_pred             HHHHHHhcC--CCccEEEECCCC
Q 017335          263 SQVIKEMTD--GGADYCFECIGL  283 (373)
Q Consensus       263 ~~~i~~~~~--~~~d~vid~~g~  283 (373)
                      .+.+.+...  +++|++|++.|.
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            333333222  379999998873

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.65  E-value=0.022  Score=50.68  Aligned_cols=76  Identities=20%  Similarity=0.214  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc--CCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT--DGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~--~~~~d~vi  278 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++++.    ++.+. ..+..+-...+++.+.+.+..  .+++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~-~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPF-ATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSS-EEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCc-eEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999998 9999999999999999 99999988653    22342 222222211123333333322  23799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.65  E-value=0.022  Score=50.64  Aligned_cols=100  Identities=16%  Similarity=0.080  Sum_probs=69.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcC-CceEEcCCCCCCccHHHHHHHhcC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lg-a~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      +.......++.+||-+|+|. |..+..+++.. +. +|++++.+++..+.+++.. .-.++..+.   .++      ..+
T Consensus        25 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~~~------~~~   93 (259)
T 2p35_A           25 LLAQVPLERVLNGYDLGCGP-GNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL---ATW------KPA   93 (259)
T ss_dssp             HHTTCCCSCCSSEEEETCTT-THHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT---TTC------CCS
T ss_pred             HHHhcCCCCCCEEEEecCcC-CHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh---hhc------Ccc
Confidence            45556678899999999975 77777888775 55 9999999999988887642 223333322   111      112


Q ss_pred             CCccEEEECCC------CHHHHHHHHHHhccCCceEEEEc
Q 017335          272 GGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       272 ~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +.+|+|+....      ....+..+.+.|+++ |+++..-
T Consensus        94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  132 (259)
T 2p35_A           94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM  132 (259)
T ss_dssp             SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            37999996442      234577888999997 9988764

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.63  E-value=0.067  Score=50.05  Aligned_cols=134  Identities=16%  Similarity=0.200  Sum_probs=81.9

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCCeEE-EEcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          205 TVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~-G~~~Vi-~~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +|.|+|.|.+|...+..++.. ++ +++ +.++++++.+. ++++|...++       .++.+.+.   ...+|+|+.|+
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~t   72 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAY-------KDPHELIE---DPNVDAVLVCS   72 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEE-------SSHHHHHH---CTTCCEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCcee-------CCHHHHhc---CCCCCEEEEcC
Confidence            689999999998877666554 56 666 46778777655 4567765554       23433332   13799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      ......+.+..++..  |+-+++..+.....-. .....+..  +..+.-..  .++....+..+.+++++|+|-
T Consensus        73 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           73 STNTHSELVIACAKA--KKHVFCEKPLSLNLADVDRMIEETKKADVILFTGF--NRRFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             CCcchHHHHHHHHhc--CCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEee--cccCCHHHHHHHHHHHcCCCC
Confidence            987777888888887  4445564421111000 01111222  44443332  222346788889999998774

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.62  E-value=0.027  Score=50.36  Aligned_cols=78  Identities=19%  Similarity=0.278  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCcc-HHHHHHHhc-CCCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKT-VSQVIKEMT-DGGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~-~~~~i~~~~-~~~~d~v  277 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.++.  .+.++... .+..+- .+.+ +.+.+.... .+++|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGEDV--VADLGDRARFAAADV-TDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHHH--HHHTCTTEEEEECCT-TCHHHHHHHHHHHHHHSCEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHHH--HHhcCCceEEEECCC-CCHHHHHHHHHHHHHhCCCCEE
Confidence            4689999998 8999999998888999 999999865433  34455322 222221 1122 222222111 2479999


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +++.|.
T Consensus        84 v~nAg~   89 (257)
T 3tl3_A           84 VNCAGT   89 (257)
T ss_dssp             EECGGG
T ss_pred             EECCCC
Confidence            999883

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=95.62  E-value=0.019  Score=49.42  Aligned_cols=93  Identities=15%  Similarity=0.141  Sum_probs=64.7

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCceEEcCCCCCCccHHHHHHHh-cCCCcc
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEM-TDGGAD  275 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~~vi~~~~~~~~~~~~~i~~~-~~~~~d  275 (373)
                      ..+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. +.. ++..+-   .       .+ ..+.+|
T Consensus        39 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~d~---~-------~~~~~~~fD  104 (211)
T 3e23_A           39 GELPAGAKILELGCGA-GYQAEAMLAA-GF-DVDATDGSPELAAEASRRLGRP-VRTMLF---H-------QLDAIDAYD  104 (211)
T ss_dssp             TTSCTTCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHTSC-CEECCG---G-------GCCCCSCEE
T ss_pred             HhcCCCCcEEEECCCC-CHHHHHHHHc-CC-eEEEECCCHHHHHHHHHhcCCc-eEEeee---c-------cCCCCCcEE
Confidence            3467899999999876 6677777766 77 999999999988888764 433 222211   1       11 223899


Q ss_pred             EEEECCC--------CHHHHHHHHHHhccCCceEEEEc
Q 017335          276 YCFECIG--------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       276 ~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +|+....        ....+..+.+.|+++ |+++..-
T Consensus       105 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  141 (211)
T 3e23_A          105 AVWAHACLLHVPRDELADVLKLIWRALKPG-GLFYASY  141 (211)
T ss_dssp             EEEECSCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEecCchhhcCHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            9996532        123578889999997 9988763

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.62  E-value=0.033  Score=49.13  Aligned_cols=81  Identities=21%  Similarity=0.217  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .+++|||+|+ |++|...++.+...|+ +|+++ .+++++.+.+    ++.+.. ..+..+-....++.+.+.+...  +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4679999998 9999999999999999 89988 5665554433    233432 2222222111223333332221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        83 ~~d~vi~~Ag~   93 (247)
T 2hq1_A           83 RIDILVNNAGI   93 (247)
T ss_dssp             CCCEEEECC--
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.61  E-value=0.044  Score=50.00  Aligned_cols=41  Identities=12%  Similarity=0.046  Sum_probs=35.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG  243 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~  243 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            4689999998 8999999999999999 999999 888765544

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.60  E-value=0.03  Score=50.39  Aligned_cols=75  Identities=20%  Similarity=0.238  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++     ...+ ..+..+-....++.+.+.+...  +++|++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKY-DHIECDVTNPDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSS-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCce-EEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999998 9999999999999999 99999988765     1112 2222221011233333333222  3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        80 ~~Ag~   84 (264)
T 2dtx_A           80 NNAGI   84 (264)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=95.59  E-value=0.085  Score=51.66  Aligned_cols=100  Identities=12%  Similarity=0.117  Sum_probs=67.4

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHh
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....++++++||=+|+|+ |..++++|+.++ ..+|+++|.++++.+.++    ++|.. .+++.      +..+ +...
T Consensus        95 ~~L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~------Da~~-l~~~  166 (464)
T 3m6w_A           95 VLLDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQA------PPRA-LAEA  166 (464)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECS------CHHH-HHHH
T ss_pred             HhcCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEEC------CHHH-hhhh
Confidence            345788999999998876 666777777764 248999999999887775    35654 23332      2222 2222


Q ss_pred             cCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335          270 TDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       270 ~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ..+.||+|+ |  |+|.                         ...+..+++.|++| |+++..
T Consensus       167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~Lvys  228 (464)
T 3m6w_A          167 FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG-GVLVYS  228 (464)
T ss_dssp             HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            244899999 3  4331                         23577888899997 998854

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.58  E-value=0.042  Score=51.23  Aligned_cols=41  Identities=12%  Similarity=0.046  Sum_probs=35.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG  243 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~  243 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4689999998 9999999999999999 899999 888776554

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.57  E-value=0.022  Score=53.38  Aligned_cols=88  Identities=19%  Similarity=0.316  Sum_probs=60.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++..+.+..+.+|+..+         ++.+.+.     ..|+|+-++
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---------~l~ell~-----~aDvV~l~~  208 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQV---------ACSELFA-----SSDFILLAL  208 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeC---------CHHHHHh-----hCCEEEEcC
Confidence            47899999999999999999999999 99999998766666666664211         1222221     367777666


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILG  305 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G  305 (373)
                      ....    .+ ...+..|+++ +.++.++
T Consensus       209 P~t~~t~~li~~~~l~~mk~g-ailIN~a  236 (330)
T 4e5n_A          209 PLNADTLHLVNAELLALVRPG-ALLVNPC  236 (330)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECS
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-cEEEECC
Confidence            5321    11 3556667775 6666665

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.56  E-value=0.035  Score=51.72  Aligned_cols=79  Identities=14%  Similarity=0.148  Sum_probs=50.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC-----hhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-----PEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~-----~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      ++++||+|+ |++|.+.++.+...|+ +|+++.++     +++.+.+.    +.+.. ..+..+-....++.+.+.+...
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999998 9999999999999999 99988765     33333332    33432 2222222112333333433322


Q ss_pred             --CCccEEEECCC
Q 017335          272 --GGADYCFECIG  282 (373)
Q Consensus       272 --~~~d~vid~~g  282 (373)
                        +++|+++++.|
T Consensus        84 ~~g~iD~lVnnAG   96 (324)
T 3u9l_A           84 EDGRIDVLIHNAG   96 (324)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              37999999988

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.55  E-value=0.02  Score=51.80  Aligned_cols=75  Identities=15%  Similarity=0.086  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc--CCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT--DGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~--~~~~d~vi  278 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.     +.....+..+-...++....+.+..  -|++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-----LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-----SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-----CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6899999998 8999999999999999 999999875421     1111122111101122222222222  24799999


Q ss_pred             ECCC
Q 017335          279 ECIG  282 (373)
Q Consensus       279 d~~g  282 (373)
                      ++.|
T Consensus        84 nnAG   87 (261)
T 4h15_A           84 HMLG   87 (261)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9876

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.55  E-value=0.041  Score=49.86  Aligned_cols=82  Identities=16%  Similarity=0.230  Sum_probs=51.9

Q ss_pred             CCCCEEEEECC-Ch--HHHHHHHHHHHCCCCeEEEEcCCh--hHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhc--CC
Q 017335          201 EVGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINP--EKFEIGKK-FGITDFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       201 ~~~~~VlI~G~-G~--vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      -.+++|||+|+ |.  +|.+.++.+...|+ +|++++++.  ++.+.+.+ .+...++..+-...+++.+.+.+..  .+
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            35789999986 44  99999998889999 899999887  55555433 3332333322211123333333322  23


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|++|++.|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.55  E-value=0.033  Score=49.04  Aligned_cols=79  Identities=18%  Similarity=0.124  Sum_probs=49.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHHH----HcCCc-eE-EcCCCCCCccHHHHHHHhc--CC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGIT-DF-INPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~----~lga~-~v-i~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      +++|||+|+ |++|...++.+...|+ +|+++ ++++++.+.+.    +.+.. .. +..+-...+++.+.+.+..  -+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            368999998 9999999999888999 89888 88877655432    23432 22 3222211122323333221  13


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|.+.|
T Consensus        80 ~~d~li~~Ag   89 (245)
T 2ph3_A           80 GLDTLVNNAG   89 (245)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.55  E-value=0.037  Score=49.47  Aligned_cols=97  Identities=12%  Similarity=0.093  Sum_probs=64.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHH--hcC
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE--MTD  271 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~--~~~  271 (373)
                      ..++.+||-+|+|+ |..++.+++.....+|+++|.+++..+.+++    +|..  .++..+      ..+ +..  ...
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d------~~~-~~~~~~~~  149 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGR------AEV-LAREAGHR  149 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECC------HHH-HTTSTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECc------HHH-hhcccccC
Confidence            35788999999876 6677777777643499999999998887753    5543  334332      211 111  112


Q ss_pred             CCccEEEE-CCCC-HHHHHHHHHHhccCCceEEEEc
Q 017335          272 GGADYCFE-CIGL-TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       272 ~~~d~vid-~~g~-~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +.||+|+. .+.. ...++.+.+.|+++ |+++.+-
T Consensus       150 ~~fD~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~  184 (249)
T 3g89_A          150 EAYARAVARAVAPLCVLSELLLPFLEVG-GAAVAMK  184 (249)
T ss_dssp             TCEEEEEEESSCCHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             CCceEEEECCcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence            47999995 3333 34567788899997 9988763

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.54  E-value=0.042  Score=49.23  Aligned_cols=81  Identities=17%  Similarity=0.296  Sum_probs=50.3

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChh---HHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+   |++|.+.++.+...|+ +|++++++++   ..+.+.+ .+...++..+-....++.+.+.+...  +
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999986   5899999888888899 8999998875   3333322 34323332222111223333332221  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        86 ~iD~lv~~Ag~   96 (261)
T 2wyu_A           86 GLDYLVHAIAF   96 (261)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.52  E-value=0.032  Score=50.02  Aligned_cols=79  Identities=19%  Similarity=0.236  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-EEcCCCCCCc-cHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDK-TVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~lga~~-vi~~~~~~~~-~~~~~i~~~~~--  271 (373)
                      .+.+|||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+... ++..+- .+. ++.+.+.+...  
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADI-SKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHHHc
Confidence            4679999998 9999999999989999 8999988 66655433    2335432 222222 122 23333332221  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|++.|
T Consensus        98 ~~~d~vi~~Ag  108 (274)
T 1ja9_A           98 GGLDFVMSNSG  108 (274)
T ss_dssp             SCEEEEECCCC
T ss_pred             CCCCEEEECCC
Confidence            37999999877

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.52  E-value=0.088  Score=48.52  Aligned_cols=87  Identities=18%  Similarity=0.258  Sum_probs=59.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|.. +.       .+..+.+.     .+|+||.|+..
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~~-------~~~~~~~~-----~~DvVi~av~~   96 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGAR-LG-------RTPAEVVS-----TCDITFACVSD   96 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCE-EC-------SCHHHHHH-----HCSEEEECCSS
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCE-Ec-------CCHHHHHh-----cCCEEEEeCCC
Confidence            579999999999998888888898 899999999988877776653 21       12222221     47888888885


Q ss_pred             HHHHHHHHH-------HhccCCceEEEEc
Q 017335          284 TSVMNDAFN-------SSREGWGKTVILG  305 (373)
Q Consensus       284 ~~~~~~~~~-------~l~~~~G~~v~~G  305 (373)
                      +..+...+.       .++++ ..++.++
T Consensus        97 ~~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           97 PKAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             HHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            443554442       34454 5555553

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.52  E-value=0.038  Score=49.05  Aligned_cols=94  Identities=12%  Similarity=0.122  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-----CceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-----a~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .+.++.+||-+|+|. |..+..+++. +. +|++++.+++..+.+++.-     .-.++..+.   .++     ...++.
T Consensus        36 ~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----~~~~~~  104 (263)
T 2yqz_A           36 PKGEEPVFLELGVGT-GRIALPLIAR-GY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA---RAI-----PLPDES  104 (263)
T ss_dssp             CSSSCCEEEEETCTT-STTHHHHHTT-TC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT---TSC-----CSCTTC
T ss_pred             CCCCCCEEEEeCCcC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHhhccCCceEEEEccc---ccC-----CCCCCC
Confidence            578899999999876 7677777765 66 9999999999888887641     112222222   111     112237


Q ss_pred             ccEEEECCC------CHHHHHHHHHHhccCCceEEEE
Q 017335          274 ADYCFECIG------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       274 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +|+|+....      ....+..+.+.|++| |+++..
T Consensus       105 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~  140 (263)
T 2yqz_A          105 VHGVIVVHLWHLVPDWPKVLAEAIRVLKPG-GALLEG  140 (263)
T ss_dssp             EEEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eeEEEECCchhhcCCHHHHHHHHHHHCCCC-cEEEEE
Confidence            999996433      244688899999997 998876

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.51  E-value=0.03  Score=50.21  Aligned_cols=97  Identities=16%  Similarity=0.167  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .++++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|.   -.++..+-   .++     ....
T Consensus        43 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-----~~~~  112 (267)
T 3kkz_A           43 NLTEKSLIADIGCGT-GGQTMVLAGHVTG-QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM---DDL-----PFRN  112 (267)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHTTCSS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----CCCT
T ss_pred             cCCCCCEEEEeCCCC-CHHHHHHHhccCC-EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh---hhC-----CCCC
Confidence            378899999999986 8888888888445 99999999988777754    332   22333222   111     0122


Q ss_pred             CCccEEEECC-----CCHHHHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECI-----GLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~-----g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+|+|+...     +....+..+.+.|+++ |+++....
T Consensus       113 ~~fD~i~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  151 (267)
T 3kkz_A          113 EELDLIWSEGAIYNIGFERGLNEWRKYLKKG-GYLAVSEC  151 (267)
T ss_dssp             TCEEEEEESSCGGGTCHHHHHHHHGGGEEEE-EEEEEEEE
T ss_pred             CCEEEEEEcCCceecCHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            3799998532     3345688899999997 99887653

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.51  E-value=0.1  Score=50.22  Aligned_cols=97  Identities=18%  Similarity=0.096  Sum_probs=63.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC--CeEEEEcCChhHHHHHH-HcC------Cce-EEcCCCCCCccHHHHHHHhcCCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRA--SKIIGVDINPEKFEIGK-KFG------ITD-FINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~--~~Vi~~~~~~~~~~~~~-~lg------a~~-vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .+|+|+|+|.+|..+++.+...|.  .+|++++++.++.+.+. +++      ... .+|..+  ..++.+.+.+.   +
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d--~~~l~~~l~~~---~   76 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS--IEELVALINEV---K   76 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC--HHHHHHHHHHH---C
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC--HHHHHHHHHhh---C
Confidence            379999999999999988887773  38999999998876653 332      211 122222  12233333222   6


Q ss_pred             ccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       274 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|+|+++.+.......+..++..+ -.++.+..
T Consensus        77 ~DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~  108 (405)
T 4ina_A           77 PQIVLNIALPYQDLTIMEACLRTG-VPYLDTAN  108 (405)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHHT-CCEEESSC
T ss_pred             CCEEEECCCcccChHHHHHHHHhC-CCEEEecC
Confidence            899999998654455666677775 77776543

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.51  E-value=0.026  Score=51.56  Aligned_cols=98  Identities=14%  Similarity=0.176  Sum_probs=66.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC---------ceEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI---------TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga---------~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++. ..         -+++.      .+..+.+...
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~~  148 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI------EDASKFLENV  148 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE------SCHHHHHHHC
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE------CChHHHHHhC
Confidence            45678999999875 66777777766545999999999988888762 21         12222      2333333332


Q ss_pred             cCCCccEEEE-CCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCFE-CIG---------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vid-~~g---------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ++.+|+|+- ...         ....+..+.+.|+++ |.++....
T Consensus       149 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~~  193 (283)
T 2i7c_A          149 -TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQCE  193 (283)
T ss_dssp             -CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             -CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEECC
Confidence             448999994 321         135688999999997 99987743

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.50  E-value=0.13  Score=47.33  Aligned_cols=89  Identities=13%  Similarity=0.087  Sum_probs=62.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+.. .       .+..+.+.     ..|+||-++.
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~-------~~~~e~~~-----~aDvVi~~vp   74 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL-C-------ESVKAALS-----ASPATIFVLL   74 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE-C-------SSHHHHHH-----HSSEEEECCS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-c-------CCHHHHHh-----cCCEEEEEeC
Confidence            4579999999999999999889999 8999999999998888777531 1       22333332     4788888888


Q ss_pred             CHHHHHHHH-----HHhccCCceEEEEcc
Q 017335          283 LTSVMNDAF-----NSSREGWGKTVILGV  306 (373)
Q Consensus       283 ~~~~~~~~~-----~~l~~~~G~~v~~G~  306 (373)
                      .+..+...+     ..+.++ ..++.++.
T Consensus        75 ~~~~~~~v~~~~~l~~~~~g-~ivid~st  102 (306)
T 3l6d_A           75 DNHATHEVLGMPGVARALAH-RTIVDYTT  102 (306)
T ss_dssp             SHHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred             CHHHHHHHhcccchhhccCC-CEEEECCC
Confidence            765344433     234554 56665543

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.50  E-value=0.032  Score=49.14  Aligned_cols=101  Identities=11%  Similarity=0.085  Sum_probs=66.2

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHH-H
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIK-E  268 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~-~  268 (373)
                      .....++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .|..   .++..+.   .++   +. .
T Consensus        66 ~~~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~---~~~~  138 (232)
T 3ntv_A           66 LIRMNNVKNILEIGTAI-GYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNA---LEQ---FENV  138 (232)
T ss_dssp             HHHHHTCCEEEEECCSS-SHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCG---GGC---HHHH
T ss_pred             HHhhcCCCEEEEEeCch-hHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH---HHH---HHhh
Confidence            34456789999999876 7777788875423399999999988877754    3432   3333332   221   22 1


Q ss_pred             hcCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          269 MTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       269 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      . .+.||+|+-....   ...++.+.+.|++| |.++.-..
T Consensus       139 ~-~~~fD~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~d~~  177 (232)
T 3ntv_A          139 N-DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQ-GLVITDNV  177 (232)
T ss_dssp             T-TSCEEEEEEETTSSSHHHHHHHHGGGEEEE-EEEEEECT
T ss_pred             c-cCCccEEEEcCcHHHHHHHHHHHHHhcCCC-eEEEEeeC
Confidence            2 3489999943322   33567888999997 99887543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.49  E-value=0.037  Score=49.54  Aligned_cols=82  Identities=13%  Similarity=0.166  Sum_probs=52.2

Q ss_pred             CCCCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhc--
Q 017335          200 VEVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMT--  270 (373)
Q Consensus       200 ~~~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~--  270 (373)
                      ...+++|||+|+   |++|.+.++.+...|+ +|++++++++..+.++    +.+...++..+-....++.+.+.+..  
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            456889999985   5899999999889999 9999988865444443    33432333322211123333333322  


Q ss_pred             CCCccEEEECCC
Q 017335          271 DGGADYCFECIG  282 (373)
Q Consensus       271 ~~~~d~vid~~g  282 (373)
                      .+++|++|++.|
T Consensus        90 ~g~id~lv~nAg  101 (271)
T 3ek2_A           90 WDSLDGLVHSIG  101 (271)
T ss_dssp             CSCEEEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            237999999877

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.49  E-value=0.087  Score=44.03  Aligned_cols=100  Identities=11%  Similarity=0.099  Sum_probs=68.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc----eEEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT----DFINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~----~vi~~~~~~~~~~~~~  265 (373)
                      +.+....+++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++.    +..    .++..+.   .+.   
T Consensus        44 l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~---~~~---  114 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---YEN---  114 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---TTT---
T ss_pred             HHHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch---hcc---
Confidence            45666778999999999875 7777777777 76 999999999887777642    322    3333322   111   


Q ss_pred             HHHhcCCCccEEEECCCC-------HHHHHHHHHHhccCCceEEEEcc
Q 017335          266 IKEMTDGGADYCFECIGL-------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       266 i~~~~~~~~d~vid~~g~-------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                         ...+.+|+|+....-       ...+..+.+.|+++ |+++....
T Consensus       115 ---~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  158 (194)
T 1dus_A          115 ---VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVVIQ  158 (194)
T ss_dssp             ---CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ---cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCC-CEEEEEEC
Confidence               113379999964431       23577788899997 99887754

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.49  E-value=0.059  Score=50.63  Aligned_cols=134  Identities=13%  Similarity=0.104  Sum_probs=82.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHC-CCCeEE-EEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          204 STVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~-G~~~Vi-~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -+|.|+|.|.+|...+..++.. ++ +++ +.++++++.+.+ +++|+..   +     .++.+.+.   ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~lvav~d~~~~~~~~~~~~~g~~~---~-----~~~~~~l~---~~~~D~V~i~   73 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKL-KLVTCYSRTEDKREKFGKRYNCAG---D-----ATMEALLA---REDVEMVIIT   73 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSE-EEEEEECSSHHHHHHHHHHHTCCC---C-----SSHHHHHH---CSSCCEEEEC
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCCC---c-----CCHHHHhc---CCCCCEEEEe
Confidence            4799999999998877777766 67 655 567787776654 5577642   1     23433332   2379999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      +......+.+..++..  |+-+++..+.....-. ........  +..+.-..  .++....+..+.+++++|+|-
T Consensus        74 tp~~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~--~~R~~p~~~~~k~~i~~g~iG  145 (354)
T 3db2_A           74 VPNDKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH--SSRRLGALRKMKEMIDTKEIG  145 (354)
T ss_dssp             SCTTSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC--GGGGSHHHHHHHHHHHTTTTC
T ss_pred             CChHHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee--chhcCHHHHHHHHHHhcCCCC
Confidence            9987768888888887  4545564422111000 01111222  44443222  222346788889999998873

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.48  E-value=0.036  Score=49.96  Aligned_cols=81  Identities=16%  Similarity=0.060  Sum_probs=50.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      ..+++|||+|+ |++|.+.++.+...|+ +|+++ .++.++.+.+.    +.+.. .++..+-....++.+.+.+...  
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45789999998 9999999999999999 78766 77766655442    33432 2222222111223333333222  


Q ss_pred             CCccEEEECCC
Q 017335          272 GGADYCFECIG  282 (373)
Q Consensus       272 ~~~d~vid~~g  282 (373)
                      +++|++|++.|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999877

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.47  E-value=0.11  Score=48.26  Aligned_cols=132  Identities=13%  Similarity=0.166  Sum_probs=81.7

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCCeEE-EEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          205 TVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~-G~~~Vi-~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +|.|+|.|.+|...+..++.. ++ +++ +.++++++.+.+ +++|..  +       .++.+.+.   ...+|+|+.|+
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~-------~~~~~~l~---~~~~D~V~i~t   71 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V-------RTIDAIEA---AADIDAVVICT   71 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E-------CCHHHHHH---CTTCCEEEECS
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c-------CCHHHHhc---CCCCCEEEEeC
Confidence            689999999999877777665 67 666 577787776554 556764  2       23333332   22799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      ......+.+..++..  |+-+++..+.....-. ........  +..+.-..  ..+....+..+.+++++|+|-
T Consensus        72 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           72 PTDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF--NRRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHTTTTC
T ss_pred             CchhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc--cccCCHHHHHHHHHHHcCCCC
Confidence            987778888888887  4556665421111000 01111222  44443222  222246788899999998874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.47  E-value=0.037  Score=50.35  Aligned_cols=80  Identities=13%  Similarity=0.041  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHH-----HcCCc-eEEcCCCCC----CccHHHHHHHh
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGK-----KFGIT-DFINPATCG----DKTVSQVIKEM  269 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~-----~lga~-~vi~~~~~~----~~~~~~~i~~~  269 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++ ++.+.+.     ..|.. .++..+-..    ..++.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4689999998 8999999998888999 999999887 6554332     23432 222222211    12222222222


Q ss_pred             c--CCCccEEEECCC
Q 017335          270 T--DGGADYCFECIG  282 (373)
Q Consensus       270 ~--~~~~d~vid~~g  282 (373)
                      .  .+++|++|++.|
T Consensus       101 ~~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          101 FRAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            1  137999999887

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.45  E-value=0.023  Score=51.17  Aligned_cols=90  Identities=14%  Similarity=0.040  Sum_probs=59.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+ +++|+|+|++|.+++..+...|+++|+++.++.++.+.+.+ ++.   ...     .+..+.+     ..+|+||+|
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~-----~~~~~~~-----~~aDiVIna  173 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL-----DQLDEVV-----KKAKSLFNT  173 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG-----GGHHHHH-----HTCSEEEEC
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH-----HHHHhhh-----cCCCEEEEC
Confidence            45 99999999999999999999998889999999887665432 221   111     2222222     168999998


Q ss_pred             CCCHHH---HHHHHHHhccCCceEEEEcc
Q 017335          281 IGLTSV---MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       281 ~g~~~~---~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++....   ...-...++++ ..++++-.
T Consensus       174 tp~gm~p~~~~i~~~~l~~~-~~V~Divy  201 (253)
T 3u62_A          174 TSVGMKGEELPVSDDSLKNL-SLVYDVIY  201 (253)
T ss_dssp             SSTTTTSCCCSCCHHHHTTC-SEEEECSS
T ss_pred             CCCCCCCCCCCCCHHHhCcC-CEEEEeeC
Confidence            863210   00013456775 77777743

>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A

Probab=95.44  E-value=0.017  Score=52.28  Aligned_cols=90  Identities=10%  Similarity=-0.105  Sum_probs=61.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C---------ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I---------TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a---------~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ..+++||++|+|. |..+..+++. + .+|++++.+++-.+.+++.- .         -+++..+.   .++       .
T Consensus        71 ~~~~~VL~iG~G~-G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~---~~~-------~  137 (262)
T 2cmg_A           71 KELKEVLIVDGFD-LELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLD-------I  137 (262)
T ss_dssp             SCCCEEEEESSCC-HHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGG---GSC-------C
T ss_pred             CCCCEEEEEeCCc-CHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechH---HHH-------H
Confidence            4568999999986 7777778887 7 59999999988777765421 1         12222211   111       1


Q ss_pred             CCCccEEEECCCC-HHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFECIGL-TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                       +.||+|+-.... ...+..+.+.|+++ |.++...
T Consensus       138 -~~fD~Ii~d~~dp~~~~~~~~~~L~pg-G~lv~~~  171 (262)
T 2cmg_A          138 -KKYDLIFCLQEPDIHRIDGLKRMLKED-GVFISVA  171 (262)
T ss_dssp             -CCEEEEEESSCCCHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             -hhCCEEEECCCChHHHHHHHHHhcCCC-cEEEEEc
Confidence             469999944433 33588999999997 9998753

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.43  E-value=0.014  Score=51.94  Aligned_cols=94  Identities=18%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.      ....|-.+   .+-.+.+.+...+++|++|++.|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~~~~Dl~~---~~~v~~~~~~~~~~id~lv~~Ag   71 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------DLSTAEGR---KQAIADVLAKCSKGMDGLVLCAG   71 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHH---HHHHHHHHTTCTTCCSEEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------ccccCCCC---HHHHHHHHHHhCCCCCEEEECCC
Confidence            47899998 9999999999988999 89999988654321      00000000   11111111111247899999887


Q ss_pred             CHH------------------HHHHHHHHhcc-CCceEEEEccc
Q 017335          283 LTS------------------VMNDAFNSSRE-GWGKTVILGVE  307 (373)
Q Consensus       283 ~~~------------------~~~~~~~~l~~-~~G~~v~~G~~  307 (373)
                      ...                  ..+.+++.++. +.|+++.++..
T Consensus        72 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           72 LGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             CCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            422                  23344555533 12789988753

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.43  E-value=0.013  Score=51.38  Aligned_cols=96  Identities=17%  Similarity=0.115  Sum_probs=69.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-CceEEcCCCCCCccHHHHHHHhc-CCCccEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMT-DGGADYC  277 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a~~vi~~~~~~~~~~~~~i~~~~-~~~~d~v  277 (373)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.++...+.+++.. ...++..+-   .+.   + ... ++.||+|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~---~-~~~~~~~fD~v  115 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNG---KGE---L-PAGLGAPFGLI  115 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCS---CSS---C-CTTCCCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcch---hhc---c-CCcCCCCEEEE
Confidence            47889999999976 7777777777 77 9999999999998887653 223333322   000   0 112 3489999


Q ss_pred             EECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          278 FECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       278 id~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +........+..+.+.|+++ |+++..+.
T Consensus       116 ~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (226)
T 3m33_A          116 VSRRGPTSVILRLPELAAPD-AHFLYVGP  143 (226)
T ss_dssp             EEESCCSGGGGGHHHHEEEE-EEEEEEES
T ss_pred             EeCCCHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            98766666688999999997 99995543

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=95.42  E-value=0.076  Score=46.50  Aligned_cols=101  Identities=18%  Similarity=0.184  Sum_probs=64.1

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhH----HHHHHHcCCceEEcCCCCCCccHHHHHHHhcC
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEK----FEIGKKFGITDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~----~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      ...++++++||-+|+|. |..+..+++..| ..+|++++.+++.    .+.+++...-.++..+.   .+.. .+ ....
T Consensus        72 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~---~~~~-~~-~~~~  145 (233)
T 2ipx_A           72 QIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDA---RHPH-KY-RMLI  145 (233)
T ss_dssp             CCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCT---TCGG-GG-GGGC
T ss_pred             eecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEccc---CChh-hh-cccC
Confidence            44578999999999987 888888888864 2399999999653    33444432223333332   1110 00 1123


Q ss_pred             CCccEEEECCCCH-H---HHHHHHHHhccCCceEEEE
Q 017335          272 GGADYCFECIGLT-S---VMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~~~d~vid~~g~~-~---~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.+|+|+...... .   .+..+.+.|+++ |+++..
T Consensus       146 ~~~D~V~~~~~~~~~~~~~~~~~~~~Lkpg-G~l~i~  181 (233)
T 2ipx_A          146 AMVDVIFADVAQPDQTRIVALNAHTFLRNG-GHFVIS  181 (233)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CcEEEEEEcCCCccHHHHHHHHHHHHcCCC-eEEEEE
Confidence            4799999654432 2   256688999997 998763

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.42  E-value=0.048  Score=49.63  Aligned_cols=95  Identities=16%  Similarity=0.197  Sum_probs=66.4

Q ss_pred             ccchhhhhHHHHHHHHhCC-CCCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+||....+.. +++..++ -.|++++|+|.| .+|..++.++...|+ +|..+.+..                      
T Consensus       140 ~~PcTp~gv~~-lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T----------------------  195 (286)
T 4a5o_A          140 LRPCTPKGIMT-LLASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT----------------------  195 (286)
T ss_dssp             SCCHHHHHHHH-HHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC----------------------
T ss_pred             CCCCCHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC----------------------
Confidence            34544444444 3444444 479999999985 599999999999999 888876421                      


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      .++.+.++     .+|+||.++|.+..+.  -+++++| ..++++|...
T Consensus       196 ~~L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~~  236 (286)
T 4a5o_A          196 RDLADHVS-----RADLVVVAAGKPGLVK--GEWIKEG-AIVIDVGINR  236 (286)
T ss_dssp             SCHHHHHH-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCSCS
T ss_pred             cCHHHHhc-----cCCEEEECCCCCCCCC--HHHcCCC-eEEEEecccc
Confidence            23333322     6899999999876332  3567997 9999999753

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.41  E-value=0.039  Score=50.01  Aligned_cols=94  Identities=13%  Similarity=0.153  Sum_probs=66.5

Q ss_pred             ccchhhhhHHHHHHHHhCCCCCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCc
Q 017335          182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  260 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~  260 (373)
                      .+||+...... +++..+ -.|.+++|+|.| .+|..++.++...|+ +|.++.+..                      .
T Consensus       131 ~~PcTp~gv~~-lL~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t----------------------~  185 (276)
T 3ngx_A          131 LVPATPRAVID-IMDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT----------------------K  185 (276)
T ss_dssp             SCCHHHHHHHH-HHHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------S
T ss_pred             CCCCcHHHHHH-HHHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc----------------------c
Confidence            34544444444 334445 789999999985 699999999999999 888886421                      2


Q ss_pred             cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      ++.+.++     .+|+||.++|.+..+.  -.++++| ..++++|...
T Consensus       186 ~L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~~  225 (276)
T 3ngx_A          186 DIGSMTR-----SSKIVVVAVGRPGFLN--REMVTPG-SVVIDVGINY  225 (276)
T ss_dssp             CHHHHHH-----HSSEEEECSSCTTCBC--GGGCCTT-CEEEECCCEE
T ss_pred             cHHHhhc-----cCCEEEECCCCCcccc--HhhccCC-cEEEEeccCc
Confidence            3433333     5899999999875333  2567997 9999998753

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=95.40  E-value=0.056  Score=47.85  Aligned_cols=100  Identities=14%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC---ceEEcCCCCCCccHHHHHHHhc
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI---TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga---~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      +.......++.+||-+|+|. |..+..+++. |..+|++++.+++..+.+++...   -.++..+-   .++     ...
T Consensus        36 l~~~~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~-----~~~  105 (253)
T 3g5l_A           36 LKKMLPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAI---EDI-----AIE  105 (253)
T ss_dssp             HHTTCCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCG---GGC-----CCC
T ss_pred             HHHhhhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcch---hhC-----CCC
Confidence            44445566899999999976 7777777776 54499999999999888876432   12232221   111     112


Q ss_pred             CCCccEEEECCC------CHHHHHHHHHHhccCCceEEEE
Q 017335          271 DGGADYCFECIG------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       271 ~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ++.+|+|+....      ....+..+.+.|+++ |+++..
T Consensus       106 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~  144 (253)
T 3g5l_A          106 PDAYNVVLSSLALHYIASFDDICKKVYINLKSS-GSFIFS  144 (253)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCC-cEEEEE
Confidence            248999996432      234678899999997 998875

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.40  E-value=0.018  Score=50.74  Aligned_cols=98  Identities=16%  Similarity=0.134  Sum_probs=64.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCc-eEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      .+++.+||-+|+|. |..+..+++.... +|++++.+++..+.+++.    +.. .++.      .++.+.+..+.++.|
T Consensus        58 ~~~~~~vLDiGcGt-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~------~d~~~~~~~~~~~~f  129 (236)
T 1zx0_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK------GLWEDVAPTLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE------SCHHHHGGGSCTTCE
T ss_pred             CCCCCeEEEEeccC-CHHHHHHHhcCCC-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEe------cCHHHhhcccCCCce
Confidence            57889999999975 6777777554444 899999999988888753    211 1221      233332222333489


Q ss_pred             cEEEE-CCC----CH------HHHHHHHHHhccCCceEEEEcc
Q 017335          275 DYCFE-CIG----LT------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       275 d~vid-~~g----~~------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |+|+. +..    ..      ..+..+.+.|++| |+++++..
T Consensus       130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~  171 (236)
T 1zx0_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCNL  171 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECCH
T ss_pred             EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCC-eEEEEEec
Confidence            99987 322    11      2367889999997 99887643

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.40  E-value=0.038  Score=51.02  Aligned_cols=44  Identities=25%  Similarity=0.209  Sum_probs=36.9

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      ..++.+|||+|+ |.+|...+..+...|. +|++++++.++.+.+.
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~   52 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHH
Confidence            345789999998 9999999998888999 9999999887765543

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=95.40  E-value=0.042  Score=47.08  Aligned_cols=101  Identities=21%  Similarity=0.262  Sum_probs=68.7

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CC---ceEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GI---TDFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga---~~vi~~~~~~~~~~~~~i  266 (373)
                      +......+++ +||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    +.   -.++..+-   .++    
T Consensus        36 ~~~~~~~~~~-~vLdiG~G~-G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  105 (219)
T 3dlc_A           36 IINRFGITAG-TCIDIGSGP-GALSIALAKQSDF-SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV---HNI----  105 (219)
T ss_dssp             HHHHHCCCEE-EEEEETCTT-SHHHHHHHHHSEE-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT---TBC----
T ss_pred             HHHhcCCCCC-EEEEECCCC-CHHHHHHHHcCCC-eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH---HHC----
Confidence            4455666777 999999976 7788888888666 999999999888777643    32   12332222   111    


Q ss_pred             HHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ...++.+|+|+....      ....+..+.+.|+++ |+++....
T Consensus       106 -~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  149 (219)
T 3dlc_A          106 -PIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSG-GKTYIGGG  149 (219)
T ss_dssp             -SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             -CCCcccccEEEECchHhhccCHHHHHHHHHHhCCCC-CEEEEEec
Confidence             122237999996432      144688999999997 99887643

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.39  E-value=0.059  Score=48.58  Aligned_cols=98  Identities=16%  Similarity=0.192  Sum_probs=67.6

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-CceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .......++.+||-+|+|. |..+..+++ .+. +|++++.+++..+.+++.. .-.++..+.   .++     . .++.
T Consensus        50 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~-~~~~  117 (279)
T 3ccf_A           50 LQLLNPQPGEFILDLGCGT-GQLTEKIAQ-SGA-EVLGTDNAATMIEKARQNYPHLHFDVADA---RNF-----R-VDKP  117 (279)
T ss_dssp             HHHHCCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHCTTSCEEECCT---TTC-----C-CSSC
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHh-CCC-eEEEEECCHHHHHHHHhhCCCCEEEECCh---hhC-----C-cCCC
Confidence            4555678899999999976 777777777 677 9999999999888887642 112332222   111     0 1237


Q ss_pred             ccEEEECCC------CHHHHHHHHHHhccCCceEEEEc
Q 017335          274 ADYCFECIG------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       274 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ||+|+....      ....+..+.+.|++| |+++..-
T Consensus       118 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~~  154 (279)
T 3ccf_A          118 LDAVFSNAMLHWVKEPEAAIASIHQALKSG-GRFVAEF  154 (279)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cCEEEEcchhhhCcCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            999996432      134588899999997 9988653

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=95.38  E-value=0.057  Score=47.54  Aligned_cols=101  Identities=18%  Similarity=0.241  Sum_probs=69.0

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      +.+..+++++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .|..  .++..+.   .++     
T Consensus        13 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~-----   81 (239)
T 1xxl_A           13 MIKTAECRAEHRVLDIGAGA-GHTALAFSPYV-Q-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   81 (239)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCcCCCCEEEEEccCc-CHHHHHHHHhC-C-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc---ccC-----
Confidence            35667889999999999976 77777777654 4 99999999988777654    2322  2332222   111     


Q ss_pred             HhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ...++.||+|+....      ....+..+.+.|+++ |+++....
T Consensus        82 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  125 (239)
T 1xxl_A           82 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVDH  125 (239)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            122237999996532      134678899999997 99988654

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=95.38  E-value=0.27  Score=41.28  Aligned_cols=96  Identities=17%  Similarity=0.158  Sum_probs=61.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      .++++||-+|+|. |..++.+++ .+..+|++++.+++..+.+++    .+.+  .++.      .++.+......++.+
T Consensus        43 ~~~~~vLDlgcG~-G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~------~d~~~~~~~~~~~~f  114 (189)
T 3p9n_A           43 LTGLAVLDLYAGS-GALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGLSGATLRR------GAVAAVVAAGTTSPV  114 (189)
T ss_dssp             CTTCEEEEETCTT-CHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE------SCHHHHHHHCCSSCC
T ss_pred             CCCCEEEEeCCCc-CHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEE------ccHHHHHhhccCCCc
Confidence            5789999998865 555555555 465589999999988777754    3432  2333      234333333334489


Q ss_pred             cEEEECC---CC----HHHHHHHHH--HhccCCceEEEEc
Q 017335          275 DYCFECI---GL----TSVMNDAFN--SSREGWGKTVILG  305 (373)
Q Consensus       275 d~vid~~---g~----~~~~~~~~~--~l~~~~G~~v~~G  305 (373)
                      |+|+-..   ..    ...+..+.+  .|+++ |.++..-
T Consensus       115 D~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pg-G~l~~~~  153 (189)
T 3p9n_A          115 DLVLADPPYNVDSADVDAILAALGTNGWTREG-TVAVVER  153 (189)
T ss_dssp             SEEEECCCTTSCHHHHHHHHHHHHHSSSCCTT-CEEEEEE
T ss_pred             cEEEECCCCCcchhhHHHHHHHHHhcCccCCC-eEEEEEe
Confidence            9999532   21    224566666  89997 9987654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.37  E-value=0.039  Score=48.57  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=49.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEE-EcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhc--CCC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~-~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      +++|||+|+ |++|...++.+...|+ +|++ ..+++++.+.+.    +.+... .+..+-...+++.+.+.+..  .++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            468999998 9999999999999999 8888 478876655432    234321 22222111123333333321  237


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus        80 id~li~~Ag   88 (244)
T 1edo_A           80 IDVVVNNAG   88 (244)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999877

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.37  E-value=0.032  Score=52.20  Aligned_cols=88  Identities=20%  Similarity=0.248  Sum_probs=58.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.+.|...+         ++.+.+.     ..|+|+.++
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---------~l~e~l~-----~aDvVi~~v  218 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV---------STPELAA-----QSDFIVVAC  218 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC---------CHHHHHh-----hCCEEEEeC
Confidence            46799999999999999999999999 89999988766655555554211         1211121     467777776


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILG  305 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G  305 (373)
                      ....    .+ ...+..++++ ..++..+
T Consensus       219 p~~~~t~~~i~~~~~~~mk~g-ailIn~s  246 (330)
T 2gcg_A          219 SLTPATEGLCNKDFFQKMKET-AVFINIS  246 (330)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-CEEEECS
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            5421    12 3455666665 6666554

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.37  E-value=0.2  Score=45.45  Aligned_cols=41  Identities=24%  Similarity=0.464  Sum_probs=36.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      .+|.|+|+|.+|...++.+...|+ +|++.++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999999999999999 99999999988777654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.37  E-value=0.087  Score=52.32  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=52.4

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-------HHHHHHcCCce-EEcCCCCCCcc-HHHHHHHh
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITD-FINPATCGDKT-VSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-------~~~~~~lga~~-vi~~~~~~~~~-~~~~i~~~  269 (373)
                      ++++.+|||+|+ |++|...+..+...|+.+|+.+.++...       .+.+++.|... ++..+- .+.+ +.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv-td~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDV-AERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCS-SCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCC-CCHHHHHHHHhc-
Confidence            578899999988 9999999988888898678888887632       12234456432 222222 1122 3233322 


Q ss_pred             cCCCccEEEECCCC
Q 017335          270 TDGGADYCFECIGL  283 (373)
Q Consensus       270 ~~~~~d~vid~~g~  283 (373)
                        +.+|+||.+.|.
T Consensus       334 --~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 --YPPNAVFHTAGI  345 (511)
T ss_dssp             --SCCSEEEECCCC
T ss_pred             --CCCcEEEECCcc
Confidence              479999999873

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.36  E-value=0.021  Score=51.07  Aligned_cols=75  Identities=20%  Similarity=0.172  Sum_probs=48.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc--CCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT--DGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~--~~~~d~vi  278 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.     + ..+..+-...+++.+.+.+..  .+.+|++|
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~-~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----F-LAVKCDITDTEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----S-EEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----c-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3689999998 9999999999999999 99999987665432     1 222222101122333333221  23789999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            88773

>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0

Probab=95.36  E-value=0.048  Score=46.63  Aligned_cols=97  Identities=23%  Similarity=0.223  Sum_probs=60.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC----CCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD----GGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~----~~~d  275 (373)
                      ++++.+||=+|+|+ |..+..+++. +. +|+++|.++...     ...-.++..+- .+....+.+.+..+    +.+|
T Consensus        23 ~~~g~~VLDlG~G~-G~~s~~la~~-~~-~V~gvD~~~~~~-----~~~v~~~~~D~-~~~~~~~~~~~~~~~~~~~~~D   93 (191)
T 3dou_A           23 VRKGDAVIEIGSSP-GGWTQVLNSL-AR-KIISIDLQEMEE-----IAGVRFIRCDI-FKETIFDDIDRALREEGIEKVD   93 (191)
T ss_dssp             SCTTCEEEEESCTT-CHHHHHHTTT-CS-EEEEEESSCCCC-----CTTCEEEECCT-TSSSHHHHHHHHHHHHTCSSEE
T ss_pred             CCCCCEEEEEeecC-CHHHHHHHHc-CC-cEEEEecccccc-----CCCeEEEEccc-cCHHHHHHHHHHhhcccCCcce
Confidence            68899999999866 5566666666 65 999999987531     11123333332 22344444544332    4899


Q ss_pred             EEEE-----CCCC------------HHHHHHHHHHhccCCceEEEEcc
Q 017335          276 YCFE-----CIGL------------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid-----~~g~------------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|+.     +.|.            ...+..+.+.|++| |+++.--.
T Consensus        94 ~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpG-G~lv~k~~  140 (191)
T 3dou_A           94 DVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNG-GNVLLKQF  140 (191)
T ss_dssp             EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence            9994     2332            12356678899997 99886533

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.36  E-value=0.14  Score=46.71  Aligned_cols=86  Identities=15%  Similarity=0.236  Sum_probs=57.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.. +.       .+..+.+.     .+|+||.|+..
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~~-------~~~~~~~~-----~~D~vi~~vp~   70 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-AC-------ENNQKVAA-----ASDIIFTSLPN   70 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-EC-------SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-ec-------CCHHHHHh-----CCCEEEEECCC
Confidence            479999999999998888888898 899999999888877665542 11       12222221     46788888765


Q ss_pred             HHHHHHHH-------HHhccCCceEEEE
Q 017335          284 TSVMNDAF-------NSSREGWGKTVIL  304 (373)
Q Consensus       284 ~~~~~~~~-------~~l~~~~G~~v~~  304 (373)
                      +..+...+       ..++++ ..++.+
T Consensus        71 ~~~~~~v~~~~~~l~~~l~~~-~~vv~~   97 (301)
T 3cky_A           71 AGIVETVMNGPGGVLSACKAG-TVIVDM   97 (301)
T ss_dssp             HHHHHHHHHSTTCHHHHSCTT-CEEEEC
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEEC
Confidence            44343333       345554 555544

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.35  E-value=0.051  Score=52.22  Aligned_cols=103  Identities=13%  Similarity=0.103  Sum_probs=70.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      +.+...++++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.+.......-.   .+..+.+. ..++.
T Consensus        99 l~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~---~~~~~~l~-~~~~~  171 (416)
T 4e2x_A           99 FLATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFE---KATADDVR-RTEGP  171 (416)
T ss_dssp             HHHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCS---HHHHHHHH-HHHCC
T ss_pred             HHHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeec---hhhHhhcc-cCCCC
Confidence            44556678899999999876 666666665 477 9999999999999998876554432221   22222222 22348


Q ss_pred             ccEEEECCC------CHHHHHHHHHHhccCCceEEEE
Q 017335          274 ADYCFECIG------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       274 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ||+|+..-.      -...+..+.+.|+++ |++++.
T Consensus       172 fD~I~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~  207 (416)
T 4e2x_A          172 ANVIYAANTLCHIPYVQSVLEGVDALLAPD-GVFVFE  207 (416)
T ss_dssp             EEEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEECChHHhcCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            999995432      234688899999997 998865

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.35  E-value=0.039  Score=50.61  Aligned_cols=94  Identities=16%  Similarity=0.232  Sum_probs=65.2

Q ss_pred             ccchhhhhHHHHHHHHhCC-CCCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+||+...... +++...+ -.|.+|+|+|.| .+|.-++.++...|+ +|.++.+.                   .   
T Consensus       144 ~~PcTp~gi~~-ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~-------------------t---  199 (301)
T 1a4i_A          144 FIPCTPKGCLE-LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK-------------------T---  199 (301)
T ss_dssp             CCCHHHHHHHH-HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---
T ss_pred             ccCchHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC-------------------c---
Confidence            34544333333 3333443 479999999997 689999999999999 88887633                   1   


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      .++.+.+     ..+|+||.++|.+..+  --+++++| ..++++|..
T Consensus       200 ~~L~~~~-----~~ADIVI~Avg~p~~I--~~~~vk~G-avVIDVgi~  239 (301)
T 1a4i_A          200 AHLDEEV-----NKGDILVVATGQPEMV--KGEWIKPG-AIVIDCGIN  239 (301)
T ss_dssp             SSHHHHH-----TTCSEEEECCCCTTCB--CGGGSCTT-CEEEECCCB
T ss_pred             ccHHHHh-----ccCCEEEECCCCcccC--CHHHcCCC-cEEEEccCC
Confidence            3333332     2689999999987632  23457897 999999975

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.34  E-value=0.084  Score=49.61  Aligned_cols=133  Identities=9%  Similarity=0.047  Sum_probs=81.0

Q ss_pred             CEEEEECCChHHH-HHHHHHHHC-CCCeEE-EEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEE
Q 017335          204 STVAIFGLGAVGL-AVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF  278 (373)
Q Consensus       204 ~~VlI~G~G~vG~-~a~~la~~~-G~~~Vi-~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vi  278 (373)
                      -+|.|+|.|.+|. ..+..++.. ++ +++ +.++++++.+.+ +++|+..+        .++.+    +... .+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~~~--------~~~~~----ll~~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFGGEPV--------EGYPA----LLERDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHCSEEE--------ESHHH----HHTCTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcCCCCc--------CCHHH----HhcCCCCCEEE
Confidence            4799999999998 566666655 67 665 567777766554 56787543        12322    2223 799999


Q ss_pred             ECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      .|+......+.+..++..  |+-|++..+.....-. ........  +..+.-..  .++....+..+.+++++|+|-
T Consensus        95 i~tp~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  168 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENF--MFLHHPQHRQVADMLDEGVIG  168 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC--GGGGCTHHHHHHHHHHTTTTC
T ss_pred             ECCCcHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe--cccCCHHHHHHHHHHhcCCCC
Confidence            999988778888888887  4556665422211000 01112222  44443222  222236688888999998773

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.34  E-value=0.036  Score=49.49  Aligned_cols=80  Identities=9%  Similarity=0.072  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH---CCCCeEEEEcCChhHHHHHH-Hc-----CCc-eEEcCCCCCCccHHHHHHHhc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARL---NRASKIIGVDINPEKFEIGK-KF-----GIT-DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~---~G~~~Vi~~~~~~~~~~~~~-~l-----ga~-~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .++++||+|+ |++|.+.++.+..   .|+ +|+++++++++.+.+. ++     +.. ..+..+-...+++.+.+.+..
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            3678999998 8999998887776   899 9999999987765543 22     322 222222211123333333332


Q ss_pred             ----CCCcc--EEEECCC
Q 017335          271 ----DGGAD--YCFECIG  282 (373)
Q Consensus       271 ----~~~~d--~vid~~g  282 (373)
                          .+.+|  +++++.|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence                23678  9998876

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.33  E-value=0.049  Score=51.65  Aligned_cols=48  Identities=25%  Similarity=0.309  Sum_probs=41.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGIT  249 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~  249 (373)
                      -.|++|+|.|.|.+|..+++.+...|+ +|++.+++.++.+. ++++|++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            578999999999999999999999999 89999999887764 4556764

>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46

Probab=95.33  E-value=0.061  Score=44.74  Aligned_cols=97  Identities=16%  Similarity=0.031  Sum_probs=62.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhcCC
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      ..++++||-+|+|. |..+..+++. +..+|++++.+++..+.+++    .+..   .++.      .++.+.+.. ..+
T Consensus        29 ~~~~~~vLDlGcG~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~------~d~~~~~~~-~~~   99 (177)
T 2esr_A           29 YFNGGRVLDLFAGS-GGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK------MEAERAIDC-LTG   99 (177)
T ss_dssp             CCCSCEEEEETCTT-CHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC------SCHHHHHHH-BCS
T ss_pred             hcCCCeEEEeCCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE------CcHHHhHHh-hcC
Confidence            67889999999875 6666667766 54599999999988877754    3321   2332      234333322 234


Q ss_pred             CccEEEECCCC-----HHHHHHHH--HHhccCCceEEEEcc
Q 017335          273 GADYCFECIGL-----TSVMNDAF--NSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~-----~~~~~~~~--~~l~~~~G~~v~~G~  306 (373)
                      .+|+|+-...-     ...+..+.  +.|+++ |.++..-.
T Consensus       100 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~g-G~l~~~~~  139 (177)
T 2esr_A          100 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQ-VMVVCETD  139 (177)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEE-EEEEEEEE
T ss_pred             CCCEEEECCCCCcchHHHHHHHHHhCCCcCCC-cEEEEEEC
Confidence            79999964332     12344444  778997 99876644

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.32  E-value=0.083  Score=50.72  Aligned_cols=135  Identities=13%  Similarity=0.059  Sum_probs=84.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHC---------CCCeEEE-EcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          204 STVAIFGLGAVGLAVAEGARLN---------RASKIIG-VDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~---------G~~~Vi~-~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      =+|.|+|+|.+|...+...+..         ++ +|++ .++++++.+. ++++|...++       .++.+.+.+   .
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~-elvav~d~~~~~a~~~a~~~~~~~~y-------~d~~~ll~~---~   95 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRP-HLYALADQDQAMAERHAAKLGAEKAY-------GDWRELVND---P   95 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEE-EEEEEECSSHHHHHHHHHHHTCSEEE-------SSHHHHHHC---T
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCe-EEEEEEcCCHHHHHHHHHHcCCCeEE-------CCHHHHhcC---C
Confidence            3789999999998766666543         45 5555 5667776655 4678887665       234333322   3


Q ss_pred             CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHc
Q 017335          273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLD  349 (373)
Q Consensus       273 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~  349 (373)
                      .+|+|+.|+....-.+.+..+|+.  |+=|++.-+.....-. .......+  +..+.-..  .++....+.++.+++++
T Consensus        96 ~vD~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~  171 (412)
T 4gqa_A           96 QVDVVDITSPNHLHYTMAMAAIAA--GKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAF--NNIKTPAALLAKQIIAR  171 (412)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHT--TCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEEC--GGGTSHHHHHHHHHHHH
T ss_pred             CCCEEEECCCcHHHHHHHHHHHHc--CCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeecc--ceecCHHHHHHHHHHhc
Confidence            799999999987778899999988  5667775532211000 01111122  44443222  22234678889999999


Q ss_pred             CCCC
Q 017335          350 KVHL  353 (373)
Q Consensus       350 g~i~  353 (373)
                      |.|-
T Consensus       172 G~iG  175 (412)
T 4gqa_A          172 GDIG  175 (412)
T ss_dssp             TTTC
T ss_pred             CCcC
Confidence            8873

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.30  E-value=0.046  Score=48.14  Aligned_cols=80  Identities=16%  Similarity=0.130  Sum_probs=50.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCC------eEEEEcCChhHHHHHHH-c---CCc-eEEcCCCCCCccHHHHHHHhc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRAS------KIIGVDINPEKFEIGKK-F---GIT-DFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~------~Vi~~~~~~~~~~~~~~-l---ga~-~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      +++|||+|+ |++|...++.+...|+.      +|+++++++++.+.+.+ +   +.. .++..+-....++.+.+.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            568999998 99999988888888874      79999998877665432 2   332 222222211122333333322


Q ss_pred             --CCCccEEEECCC
Q 017335          271 --DGGADYCFECIG  282 (373)
Q Consensus       271 --~~~~d~vid~~g  282 (373)
                        .+++|++|++.|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              237999999887

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.30  E-value=0.06  Score=49.95  Aligned_cols=78  Identities=19%  Similarity=0.176  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC---------ChhHHHH----HHHcCCceEEcCCCCCCccHHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---------NPEKFEI----GKKFGITDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~---------~~~~~~~----~~~lga~~vi~~~~~~~~~~~~~i~  267 (373)
                      .++++||+|+ |++|...++.+...|+ +|+++++         +.++.+.    +++.+...+.|..+  ..++.+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~--~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC--HHHHHHHHH
Confidence            4789999998 8999999999989999 8998754         4444433    23345444455444  133333333


Q ss_pred             Hhc--CCCccEEEECCC
Q 017335          268 EMT--DGGADYCFECIG  282 (373)
Q Consensus       268 ~~~--~~~~d~vid~~g  282 (373)
                      +..  .+++|++|++.|
T Consensus        85 ~~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHHTSCCCEEEECCC
T ss_pred             HHHHHcCCCCEEEECCC
Confidence            221  237999999887

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.29  E-value=0.079  Score=49.57  Aligned_cols=87  Identities=16%  Similarity=0.135  Sum_probs=59.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.  +++. +. ..       .++.+.+.     ..|+|+.++
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~-~~-------~~l~ell~-----~aDvV~l~~  207 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY-YV-------DSLDDLYK-----QADVISLHV  207 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC-BC-------SCHHHHHH-----HCSEEEECS
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce-ec-------CCHHHHHh-----hCCEEEEcC
Confidence            47799999999999999999999999 999999887665  2332 22 11       12222221     478888887


Q ss_pred             CCHHH----H-HHHHHHhccCCceEEEEcc
Q 017335          282 GLTSV----M-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~~----~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      .....    + ...+..++++ +.++.++.
T Consensus       208 p~~~~t~~li~~~~l~~mk~g-a~lIn~ar  236 (333)
T 1j4a_A          208 PDVPANVHMINDESIAKMKQD-VVIVNVSR  236 (333)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence            74321    1 3466778886 77777764

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.29  E-value=0.17  Score=46.00  Aligned_cols=97  Identities=16%  Similarity=0.175  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHc-------C-CceEEcCCCCCCccHHHHHHHh
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKF-------G-ITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~l-------g-a~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...++.+||-+|+|. |..+..+++.. ...+|++++.++...+.+++.       . ...++..+-   .++     ..
T Consensus        33 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~---~~~-----~~  103 (299)
T 3g5t_A           33 HDGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS---DDF-----KF  103 (299)
T ss_dssp             CCSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT---TCC-----GG
T ss_pred             hcCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH---HhC-----Cc
Confidence            346899999999986 88899999865 444999999999988887653       1 122333322   111     11


Q ss_pred             cC------CCccEEEECCC-----CHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TD------GGADYCFECIG-----LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~------~~~d~vid~~g-----~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ..      +.+|+|+....     ....+..+.+.|++| |.++.+.
T Consensus       104 ~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (299)
T 3g5t_A          104 LGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKD-GTIAIWG  149 (299)
T ss_dssp             GCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            22      47999996433     244688999999997 9988744

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=95.28  E-value=0.024  Score=49.47  Aligned_cols=99  Identities=20%  Similarity=0.242  Sum_probs=63.4

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHH
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~  268 (373)
                      ....++.+||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|..   .++.      .+..+.+..
T Consensus        54 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~l~~  125 (221)
T 3u81_A           54 IREYSPSLVLELGAYC-GYSAVRMARLLQPGA-RLLTMEINPDCAAITQQMLNFAGLQDKVTILN------GASQDLIPQ  125 (221)
T ss_dssp             HHHHCCSEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE------SCHHHHGGG
T ss_pred             HHhcCCCEEEEECCCC-CHHHHHHHHhCCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCceEEEE------CCHHHHHHH
Confidence            3345788999999876 77888888865  45 99999999988877754    4532   2332      233333333


Q ss_pred             hcC----CCccEEEECCCCHH------HHHHHHHHhccCCceEEEEcc
Q 017335          269 MTD----GGADYCFECIGLTS------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       269 ~~~----~~~d~vid~~g~~~------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +..    +.||+||-......      .+..+ +.|++| |.++.-..
T Consensus       126 ~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkpg-G~lv~~~~  171 (221)
T 3u81_A          126 LKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKG-TVLLADNV  171 (221)
T ss_dssp             TTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTT-CEEEESCC
T ss_pred             HHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCC-eEEEEeCC
Confidence            322    47999995443222      12222 789997 99886544

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.28  E-value=0.056  Score=50.86  Aligned_cols=88  Identities=19%  Similarity=0.259  Sum_probs=59.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++..+.+...  |+..+        .++.+.+.     ..|+|+-++
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~--------~~l~ell~-----~sDvV~l~~  235 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH--------DTLDSLLG-----ASDIFLIAA  235 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC--------SSHHHHHH-----TCSEEEECS
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe--------CCHHHHHh-----hCCEEEEec
Confidence            37799999999999999999999999 9999998865444332  43211        12222221     578888777


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....    .+ ...+..|+++ ..++.++.
T Consensus       236 Plt~~T~~li~~~~l~~mk~g-ailIN~aR  264 (345)
T 4g2n_A          236 PGRPELKGFLDHDRIAKIPEG-AVVINISR  264 (345)
T ss_dssp             CCCGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            6321    11 4566778886 77777763

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.28  E-value=0.047  Score=51.42  Aligned_cols=89  Identities=24%  Similarity=0.283  Sum_probs=57.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++.++. ..+..|+..+        .++.+.+.     ..|+|+.++
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~  231 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF-----HSDCVTLHC  231 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec--------CCHHHHHh-----cCCEEEEcC
Confidence            57899999999999999999999999 999999876542 3345565321        12222221     367777665


Q ss_pred             CCHH----HH-HHHHHHhccCCceEEEEcc
Q 017335          282 GLTS----VM-NDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~----~~-~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....    .+ ...+..++++ ..++.++.
T Consensus       232 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  260 (347)
T 1mx3_A          232 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  260 (347)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhHHHHHhcCCCC-CEEEECCC
Confidence            5321    12 3455666775 66666654

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.28  E-value=0.06  Score=46.88  Aligned_cols=100  Identities=16%  Similarity=0.168  Sum_probs=64.9

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      ..++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    ...-.++..+.   .+.. ... ...+
T Consensus        69 ~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~---~~~~-~~~-~~~~  142 (227)
T 1g8a_A           69 FPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TKPE-EYR-ALVP  142 (227)
T ss_dssp             CCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TCGG-GGT-TTCC
T ss_pred             cCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccC---CCcc-hhh-cccC
Confidence            3478899999999987 8888888888652 399999999976555533    21122333322   1110 000 1123


Q ss_pred             CccEEEECCCCH----HHHHHHHHHhccCCceEEEE
Q 017335          273 GADYCFECIGLT----SVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       273 ~~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .+|+|+-.....    ..+..+.+.|+++ |+++..
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          143 KVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            799999554433    2377889999997 998877

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.26  E-value=0.13  Score=42.88  Aligned_cols=94  Identities=13%  Similarity=0.159  Sum_probs=64.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-CceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      ++++.+||-+|+|. |..+..+++. +. ++++++.+++..+.+++.. ...++..+-   .++     ....+.+|+|+
T Consensus        44 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~~~~D~i~  112 (195)
T 3cgg_A           44 APRGAKILDAGCGQ-GRIGGYLSKQ-GH-DVLGTDLDPILIDYAKQDFPEARWVVGDL---SVD-----QISETDFDLIV  112 (195)
T ss_dssp             SCTTCEEEEETCTT-THHHHHHHHT-TC-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TTS-----CCCCCCEEEEE
T ss_pred             ccCCCeEEEECCCC-CHHHHHHHHC-CC-cEEEEcCCHHHHHHHHHhCCCCcEEEccc---ccC-----CCCCCceeEEE
Confidence            67899999999975 6677777776 77 9999999999888887643 223333332   111     12223799999


Q ss_pred             ECCCC---------HHHHHHHHHHhccCCceEEEEc
Q 017335          279 ECIGL---------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       279 d~~g~---------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .....         ...+..+.+.|+++ |+++..-
T Consensus       113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~-G~l~~~~  147 (195)
T 3cgg_A          113 SAGNVMGFLAEDGREPALANIHRALGAD-GRAVIGF  147 (195)
T ss_dssp             ECCCCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ECCcHHhhcChHHHHHHHHHHHHHhCCC-CEEEEEe
Confidence            65211         34577888999997 9987653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.26  E-value=0.22  Score=45.28  Aligned_cols=75  Identities=16%  Similarity=0.198  Sum_probs=51.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc----CCc-eEEcCCCCCCccHHHHHHHhcCCC
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      -.++++||+|+ |++|.+++..+...|+ +|+++++++++.+.+. ++    +.. ...+-.+   .   +.+.+... .
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~-~  188 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---D---ASRAEAVK-G  188 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---H---HHHHHHTT-T
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC---H---HHHHHHHH-h
Confidence            36789999995 9999999999999999 7999999987766543 22    322 1223322   2   12333322 5


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus       189 ~DvlVn~ag~  198 (287)
T 1lu9_A          189 AHFVFTAGAI  198 (287)
T ss_dssp             CSEEEECCCT
T ss_pred             CCEEEECCCc
Confidence            8999999973

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.26  E-value=0.14  Score=48.47  Aligned_cols=71  Identities=13%  Similarity=0.246  Sum_probs=50.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      ..+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+...        .+..+.+...  ..+|+||-++.
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~--------~s~~e~~~~a--~~~DvVi~~vp   90 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA--------RSIEEFCAKL--VKPRVVWLMVP   90 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC--------SSHHHHHHHS--CSSCEEEECSC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe--------CCHHHHHhcC--CCCCEEEEeCC
Confidence            4689999999999999999999998 99999999999888877664311        1232222221  13477777776


Q ss_pred             CH
Q 017335          283 LT  284 (373)
Q Consensus       283 ~~  284 (373)
                      ..
T Consensus        91 ~~   92 (358)
T 4e21_A           91 AA   92 (358)
T ss_dssp             GG
T ss_pred             HH
Confidence            54

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.25  E-value=0.1  Score=49.96  Aligned_cols=96  Identities=17%  Similarity=0.126  Sum_probs=65.5

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      +++|++||-+|+|. |..++.+++. |+ +|+++|.+++..+.+++    .|.. .+..      .+..+.+.... +.|
T Consensus       212 ~~~g~~VLDlg~Gt-G~~sl~~a~~-ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~------~D~~~~l~~~~-~~f  281 (393)
T 4dmg_A          212 VRPGERVLDVYSYV-GGFALRAARK-GA-YALAVDKDLEALGVLDQAALRLGLRVDIRH------GEALPTLRGLE-GPF  281 (393)
T ss_dssp             CCTTCEEEEESCTT-THHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEE------SCHHHHHHTCC-CCE
T ss_pred             hcCCCeEEEcccch-hHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEE------ccHHHHHHHhc-CCC
Confidence            45799999998865 5556666664 88 59999999998888754    3443 3431      34444444442 359


Q ss_pred             cEEEECCCC---------------HHHHHHHHHHhccCCceEEEEcc
Q 017335          275 DYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       275 d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |+|+-....               ...+..+++.|+++ |.++.+..
T Consensus       282 D~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG-G~Lv~~s~  327 (393)
T 4dmg_A          282 HHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEE-GFLWLSSC  327 (393)
T ss_dssp             EEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             CEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            999954332               24577889999997 99986654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.25  E-value=0.028  Score=50.79  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.    ..+.. .++..+-....++.+.+.+...  +.
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4689999998 8999998888888899 8999998876544432    23432 2222222111223333333221  36


Q ss_pred             ccEEEECCC
Q 017335          274 ADYCFECIG  282 (373)
Q Consensus       274 ~d~vid~~g  282 (373)
                      +|++|++.|
T Consensus       112 id~li~~Ag  120 (279)
T 3ctm_A          112 IDVFVANAG  120 (279)
T ss_dssp             CSEEEECGG
T ss_pred             CCEEEECCc
Confidence            999999876

>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}

Probab=95.25  E-value=0.22  Score=45.04  Aligned_cols=103  Identities=12%  Similarity=0.122  Sum_probs=61.8

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHHHHc---------CC-------ceEEcCCCCC
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKKF---------GI-------TDFINPATCG  258 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~~~l---------ga-------~~vi~~~~~~  258 (373)
                      ......++.+||=+|+|. |..++.+++. |..+|++++. +++..+.+++.         |.       -.+...+.  
T Consensus        73 ~~~~~~~~~~vLDlG~G~-G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~--  148 (281)
T 3bzb_A           73 WQPELIAGKTVCELGAGA-GLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRW--  148 (281)
T ss_dssp             HCGGGTTTCEEEETTCTT-SHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCT--
T ss_pred             hcchhcCCCeEEEecccc-cHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecC--
Confidence            334456888999999874 6666666664 6559999999 78777766541         11       11221111  


Q ss_pred             CccHHHHHHH-hcCCCccEEE--ECCCC----HHHHHHHHHHhc---c--CCceEEEE
Q 017335          259 DKTVSQVIKE-MTDGGADYCF--ECIGL----TSVMNDAFNSSR---E--GWGKTVIL  304 (373)
Q Consensus       259 ~~~~~~~i~~-~~~~~~d~vi--d~~g~----~~~~~~~~~~l~---~--~~G~~v~~  304 (373)
                       .+....+.. +..+.||+|+  |+.-.    ...+..+.+.|+   +  + |+++.+
T Consensus       149 -~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~g-G~l~v~  204 (281)
T 3bzb_A          149 -GDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPT-AVALVT  204 (281)
T ss_dssp             -TSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTT-CEEEEE
T ss_pred             -CCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCC-CEEEEE
Confidence             111111211 1234899998  44432    245778888899   8  8 986654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.24  E-value=0.069  Score=47.30  Aligned_cols=40  Identities=20%  Similarity=0.154  Sum_probs=32.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEI  242 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~  242 (373)
                      .++++||+|+ +++|.+.++.+...|+ +|+++ .+++++.+.
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~   47 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEE   47 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHHH
Confidence            5789999998 8999999999999999 78775 555555443

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.24  E-value=0.055  Score=47.96  Aligned_cols=81  Identities=20%  Similarity=0.227  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+    ++.|... .+..+-...+++.+.+.+...  +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 8999999999999999 8888766 44444433    3344332 222222111233333333222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 3osu_A           82 SLDVLVNNAGI   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.24  E-value=0.061  Score=49.62  Aligned_cols=97  Identities=18%  Similarity=0.207  Sum_probs=65.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc------C---C-ceEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF------G---I-TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l------g---a-~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +   . -+++.      .+..+.+.. 
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~------~Da~~~l~~-  164 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQ-  164 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHT-
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHhh-
Confidence            45678999999875 66777888776545999999999988887652      1   1 12332      233333332 


Q ss_pred             cCCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .++.||+|+ |...         ....+..+.+.|+++ |.++.-.
T Consensus       165 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          165 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            334899999 4432         123588899999997 9988754

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=95.22  E-value=0.041  Score=47.45  Aligned_cols=102  Identities=17%  Similarity=0.307  Sum_probs=69.9

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHH----cCC--ceEEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGI--TDFINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~----lga--~~vi~~~~~~~~~~~~~  265 (373)
                      +.....+.++.+||-+|+|. |..+..+++..  .. +|++++.+++..+.+++    .+.  -.++..+.   .++   
T Consensus        29 ~~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~---~~~---  100 (219)
T 3dh0_A           29 VLKEFGLKEGMTVLDVGTGA-GFYLPYLSKMVGEKG-KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE---NKI---  100 (219)
T ss_dssp             HHHHHTCCTTCEEEESSCTT-CTTHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT---TBC---
T ss_pred             HHHHhCCCCCCEEEEEecCC-CHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc---ccC---
Confidence            45667889999999999876 77777888876  34 99999999988777754    232  22332222   111   


Q ss_pred             HHHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          266 IKEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       266 i~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                        ...++.+|+|+....      ....+..+.+.|+++ |+++....
T Consensus       101 --~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  144 (219)
T 3dh0_A          101 --PLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPF-AYLAIIDW  144 (219)
T ss_dssp             --SSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             --CCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCC-eEEEEEEe
Confidence              122237999996433      134688999999997 99988754

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.21  E-value=0.041  Score=49.11  Aligned_cols=79  Identities=14%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCc-cHHHHHHHhcC--CCc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDK-TVSQVIKEMTD--GGA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~-~~~~~i~~~~~--~~~  274 (373)
                      ++++||+|+ +++|.+.++.+...  |+ +|+.+++++++.+.+.+ ++... .+..+- .+. ++.+.+.+...  +++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDI-TEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCT-TSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCC-CCHHHHHHHHHHHHHhcCCc
Confidence            578999998 89999987766555  46 89999999888776543 44322 222221 112 23333332222  379


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++++.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999998774

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.20  E-value=0.1  Score=50.90  Aligned_cols=95  Identities=13%  Similarity=-0.009  Sum_probs=59.0

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +.+|+|+|+|.+|...+..+...|. +|++++++.++.+.+.+ ++....+..+-   .+. +.+.+... ++|+|++|+
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv---~d~-~~l~~~l~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV---NDD-AALDAEVA-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT---TCH-HHHHHHHT-TSSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec---CCH-HHHHHHHc-CCcEEEECC
Confidence            5789999999999999888888898 89999999887665532 33212221121   111 12222222 799999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEE
Q 017335          282 GLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +..........++..+ ..++..
T Consensus        77 ~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHT-CEEEES
T ss_pred             ccccchHHHHHHHhCC-CeEEEe
Confidence            8643233344556664 555544

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=95.18  E-value=0.13  Score=45.56  Aligned_cols=100  Identities=12%  Similarity=0.128  Sum_probs=60.1

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHH----HHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEI----GKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~----~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      ..+++|++||-+|+|+ |..+..+++..| -.+|++++.++...+.    +++...-..+..+.. ....   . ....+
T Consensus        72 ~~l~~g~~VLDlG~Gt-G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~-~~~~---~-~~~~~  145 (232)
T 3id6_C           72 NPIRKGTKVLYLGAAS-GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADAR-FPQS---Y-KSVVE  145 (232)
T ss_dssp             CSCCTTCEEEEETCTT-SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTT-CGGG---T-TTTCC
T ss_pred             cCCCCCCEEEEEeecC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccc-cchh---h-hcccc
Confidence            4589999999999976 667777887765 3399999999976433    233222222322220 0100   0 01123


Q ss_pred             CccEEEECCCCHH---HH-HHHHHHhccCCceEEEE
Q 017335          273 GADYCFECIGLTS---VM-NDAFNSSREGWGKTVIL  304 (373)
Q Consensus       273 ~~d~vid~~g~~~---~~-~~~~~~l~~~~G~~v~~  304 (373)
                      .+|+|+-....+.   .+ ..+.+.|++| |+++..
T Consensus       146 ~~D~I~~d~a~~~~~~il~~~~~~~LkpG-G~lvis  180 (232)
T 3id6_C          146 NVDVLYVDIAQPDQTDIAIYNAKFFLKVN-GDMLLV  180 (232)
T ss_dssp             CEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceEEEEecCCChhHHHHHHHHHHHhCCCC-eEEEEE
Confidence            7999985444322   12 2334489997 998876

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.18  E-value=0.033  Score=49.94  Aligned_cols=34  Identities=26%  Similarity=0.277  Sum_probs=30.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      +.+|+|+|+|++|..++..+...|++++..+|.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5799999999999999999999999888888764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.18  E-value=0.076  Score=46.56  Aligned_cols=73  Identities=16%  Similarity=0.028  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .+.+|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+ ..+.. ++..+- .+.   +.+.+... ++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~-~~~~D~-~d~---~~~~~~~~-~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEAD-VFIGDI-TDA---DSINPAFQ-GIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTT-EEECCT-TSH---HHHHHHHT-TCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCee-EEEecC-CCH---HHHHHHHc-CCCEEE
Confidence            4678999998 99999999888888  78 999999987765443 11222 222221 112   23333332 689999


Q ss_pred             ECCC
Q 017335          279 ECIG  282 (373)
Q Consensus       279 d~~g  282 (373)
                      .+.+
T Consensus        75 ~~a~   78 (253)
T 1xq6_A           75 ILTS   78 (253)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9876

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.17  E-value=0.038  Score=51.48  Aligned_cols=96  Identities=15%  Similarity=0.200  Sum_probs=65.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC---------ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI---------TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga---------~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++. ..         -+++.      .+..+.+.. .
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~------~D~~~~l~~-~  186 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI------EDASKFLEN-V  186 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE------SCHHHHHHH-C
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE------ccHHHHHhh-c
Confidence            4568999999876 66777777776545999999999988888753 11         12222      233333332 2


Q ss_pred             CCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.||+|+ |...         ....+..+.+.|+++ |.++...
T Consensus       187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  230 (321)
T 2pt6_A          187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  230 (321)
T ss_dssp             CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            34899999 4421         145688999999997 9988753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.17  E-value=0.042  Score=49.12  Aligned_cols=80  Identities=14%  Similarity=0.164  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++ ++..+.+++    .+.. +++..+-...+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3578999998 8999999999989999 88888554 444444433    2221 2222222111233333333322  3


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      ++|++|++.|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            7999999988

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.16  E-value=0.034  Score=51.54  Aligned_cols=96  Identities=19%  Similarity=0.196  Sum_probs=65.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc------C---C--ceEEcCCCCCCccHHHHHHHh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF------G---I--TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l------g---a--~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      |   .  -+++.      .+..+.+.. 
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~-  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER-  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH-
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE------chHHHHHHh-
Confidence            4568999999876 66777788775555999999999888877642      1   1  12332      233333332 


Q ss_pred             cCCCccEEE-ECCC------------CHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCF-ECIG------------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vi-d~~g------------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .++.+|+|+ |...            ....+..+.+.|+++ |.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  195 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCC-cEEEEEc
Confidence            344899999 4322            245688999999997 9988763

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=95.16  E-value=0.076  Score=46.47  Aligned_cols=95  Identities=21%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC---ceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI---TDFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga---~~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      +.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++...   -.++..+.   .++     ...++.+|+
T Consensus        51 ~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~---~~~-----~~~~~~fD~  119 (242)
T 3l8d_A           51 VKKEAEVLDVGCGD-GYGTYKLSRT-GY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDL---SSL-----PFENEQFEA  119 (242)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBT---TBC-----SSCTTCEEE
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHhhcccCCceEEEcch---hcC-----CCCCCCccE
Confidence            56889999999876 6677777776 77 99999999999988876521   12232222   111     112338999


Q ss_pred             EEECCCC------HHHHHHHHHHhccCCceEEEEcc
Q 017335          277 CFECIGL------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       277 vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |+....-      ...+..+.+.|+++ |+++....
T Consensus       120 v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  154 (242)
T 3l8d_A          120 IMAINSLEWTEEPLRALNEIKRVLKSD-GYACIAIL  154 (242)
T ss_dssp             EEEESCTTSSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEcChHhhccCHHHHHHHHHHHhCCC-eEEEEEEc
Confidence            9964321      24688999999997 99887654

>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}

Probab=95.16  E-value=0.082  Score=47.20  Aligned_cols=100  Identities=15%  Similarity=0.161  Sum_probs=68.3

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      +.......++.+||-+|+|. |..+..+++ .+. +|++++.+++..+.+++...-.++..+.   .++     ...++.
T Consensus        26 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~d~---~~~-----~~~~~~   94 (261)
T 3ege_A           26 IINLLNLPKGSVIADIGAGT-GGYSVALAN-QGL-FVYAVEPSIVMRQQAVVHPQVEWFTGYA---ENL-----ALPDKS   94 (261)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-SHHHHHHHT-TTC-EEEEECSCHHHHHSSCCCTTEEEECCCT---TSC-----CSCTTC
T ss_pred             HHHHhCCCCCCEEEEEcCcc-cHHHHHHHh-CCC-EEEEEeCCHHHHHHHHhccCCEEEECch---hhC-----CCCCCC
Confidence            44556778999999999976 777777777 677 9999999987777665433223333222   111     112248


Q ss_pred             ccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          274 ADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       274 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ||+|+....      ....+..+.+.|+ | |+++....
T Consensus        95 fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-g-G~~~~~~~  131 (261)
T 3ege_A           95 VDGVISILAIHHFSHLEKSFQEMQRIIR-D-GTIVLLTF  131 (261)
T ss_dssp             BSEEEEESCGGGCSSHHHHHHHHHHHBC-S-SCEEEEEE
T ss_pred             EeEEEEcchHhhccCHHHHHHHHHHHhC-C-cEEEEEEc
Confidence            999996442      1346888999999 9 98877754

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=95.16  E-value=0.2  Score=48.61  Aligned_cols=106  Identities=16%  Similarity=0.228  Sum_probs=69.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-----------HHcC--Cc--eEEcCCCCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----------KKFG--IT--DFINPATCG  258 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-----------~~lg--a~--~vi~~~~~~  258 (373)
                      +.+...++++++||=+|+|. |..++.+++..|..+|++++.+++..+.+           +.+|  ..  .++..+...
T Consensus       234 ml~~l~l~~g~~VLDLGCGs-G~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~  312 (433)
T 1u2z_A          234 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  312 (433)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence            45667889999999999986 88888999988866899999999865544           3345  22  233322200


Q ss_pred             CccHHHHHHHhcCCCccEEEE--CCCCHH---HHHHHHHHhccCCceEEEEc
Q 017335          259 DKTVSQVIKEMTDGGADYCFE--CIGLTS---VMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       259 ~~~~~~~i~~~~~~~~d~vid--~~g~~~---~~~~~~~~l~~~~G~~v~~G  305 (373)
                       ..+  .+... .+.||+|+-  +...+.   .+..+.+.|++| |+++..-
T Consensus       313 -~~~--~~~~~-~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpG-G~lVi~d  359 (433)
T 1u2z_A          313 -DNN--RVAEL-IPQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  359 (433)
T ss_dssp             -TCH--HHHHH-GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             -ccc--ccccc-cCCCCEEEEeCccccccHHHHHHHHHHhCCCC-eEEEEee
Confidence             111  11111 137999995  222233   346788899997 9998874

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.14  E-value=0.079  Score=49.32  Aligned_cols=135  Identities=13%  Similarity=0.035  Sum_probs=81.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHC-CCCeEEE-EcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          204 STVAIFGLGAVGLAVAEGARLN-RASKIIG-VDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~-~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -+|.|+|.|.+|...+..++.. ++ ++++ .++++++.+. ++++|...++       .++.+.+.   ...+|+|+.|
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~   74 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY-------GSYEELCK---DETIDIIYIP   74 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB-------SSHHHHHH---CTTCSEEEEC
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee-------CCHHHHhc---CCCCCEEEEc
Confidence            3789999999998877777764 56 6664 5677776555 4556754332       23433332   2379999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      +......+.+..++..|  +-+++..+.....-. ........  +..+.-..  ..+....+..+.+++++|+|-
T Consensus        75 tp~~~h~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  146 (330)
T 3e9m_A           75 TYNQGHYSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ--KSVFLPITQKVKATIQEGGLG  146 (330)
T ss_dssp             CCGGGHHHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC--SGGGCHHHHHHHHHHHTTTTC
T ss_pred             CCCHHHHHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE--hhhhCHHHHHHHHHHhCCCCC
Confidence            99887788888888874  445564422211000 01111222  44443222  222346688899999998874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.14  E-value=0.059  Score=47.97  Aligned_cols=81  Identities=16%  Similarity=0.241  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHH----HcCCc-eEEcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-IGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~-~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|++++++.++.. .++    +.+.. ..+..+-...+++.+.+.+..  -+
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 9999999998888999 9999998654332 222    22432 222222111122333333322  23


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|++|++.|.
T Consensus        92 ~id~li~~Ag~  102 (265)
T 1h5q_A           92 PISGLIANAGV  102 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.14  E-value=0.067  Score=49.40  Aligned_cols=76  Identities=20%  Similarity=0.203  Sum_probs=49.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH--HHHHHcCC---ceEEcCCCCCCccHHHHHHHhcCC-Ccc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF--EIGKKFGI---TDFINPATCGDKTVSQVIKEMTDG-GAD  275 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~--~~~~~lga---~~vi~~~~~~~~~~~~~i~~~~~~-~~d  275 (373)
                      +.+|||+|+ |.+|...++.+...|+ +|+++++++++.  +.++.++.   -+++..+- .+.+   .+.+...+ ++|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~---~~~~~~~~~~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDL-LEFS---NIIRTIEKVQPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCT-TCHH---HHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCC-CCHH---HHHHHHHhcCCC
Confidence            578999998 9999999998888899 999999887543  23444421   12222221 1122   22222223 689


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +||.+.+.
T Consensus        78 ~vih~A~~   85 (345)
T 2z1m_A           78 EVYNLAAQ   85 (345)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.12  E-value=0.11  Score=51.24  Aligned_cols=85  Identities=15%  Similarity=0.117  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-------HHHHHHcCCce-EEcCCCCCCccHHHHHHHh
Q 017335          199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITD-FINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       199 ~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-------~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~  269 (373)
                      .++++.++||+|+ |++|...++.+...|+++|+.+.++...       .+.+++.|... ++..+-....++.+.+.+.
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3578899999998 9999998888888898669999887641       12344556532 2222221113333444444


Q ss_pred             cC-CCccEEEECCCC
Q 017335          270 TD-GGADYCFECIGL  283 (373)
Q Consensus       270 ~~-~~~d~vid~~g~  283 (373)
                      .. +.+|+||.+.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            22 268999999873

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=95.12  E-value=0.031  Score=47.68  Aligned_cols=94  Identities=13%  Similarity=0.222  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CC-ceEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GI-TDFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga-~~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      +.++ +||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    +. ..++..+-   .++     ....+.+
T Consensus        28 ~~~~-~vLdiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----~~~~~~f   95 (202)
T 2kw5_A           28 IPQG-KILCLAEGE-GRNACFLASL-GY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL---ADF-----DIVADAW   95 (202)
T ss_dssp             SCSS-EEEECCCSC-THHHHHHHTT-TC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT---TTB-----SCCTTTC
T ss_pred             CCCC-CEEEECCCC-CHhHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh---hhc-----CCCcCCc
Confidence            5667 999999876 7777777765 77 999999999888777643    32 12332222   111     1122379


Q ss_pred             cEEEECCCC------HHHHHHHHHHhccCCceEEEEcc
Q 017335          275 DYCFECIGL------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       275 d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |+|+.+...      ...+..+.+.|+++ |+++....
T Consensus        96 D~v~~~~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  132 (202)
T 2kw5_A           96 EGIVSIFCHLPSSLRQQLYPKVYQGLKPG-GVFILEGF  132 (202)
T ss_dssp             SEEEEECCCCCHHHHHHHHHHHHTTCCSS-EEEEEEEE
T ss_pred             cEEEEEhhcCCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            999975321      23577788899997 99887754

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.12  E-value=0.016  Score=51.38  Aligned_cols=74  Identities=11%  Similarity=0.185  Sum_probs=47.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHH-----HHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI-----KEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i-----~~~~~--~~  273 (373)
                      .++++||+|+ |++|.+.++.+.. |. +|+++++++++.+.+.+......+..      ++.+..     .+...  ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES------DIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC------CHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec------ccchHHHHHHHHHHHHhcCC
Confidence            3689999998 8999998777655 87 89999999988877765432223222      222221     11111  27


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus        76 id~lv~~Ag~   85 (245)
T 3e9n_A           76 VDTLVHAAAV   85 (245)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEECCCc
Confidence            8999999884

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.12  E-value=0.017  Score=51.88  Aligned_cols=77  Identities=14%  Similarity=0.198  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      .+++|||+|+ |++|.+.++.+...|+ +|++++++.++....   .+ +.+..+-....++.+.+.+...  +++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DI-HTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TE-EEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ce-EEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4789999998 8999999999999999 999999876543221   11 2222221011223333333222  3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus       102 ~nAg~  106 (260)
T 3un1_A          102 NNAGV  106 (260)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=95.12  E-value=0.17  Score=47.73  Aligned_cols=133  Identities=15%  Similarity=0.052  Sum_probs=78.5

Q ss_pred             CEEEEECCChHHHH-HHHHHHHC-CCCeEEE-EcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          204 STVAIFGLGAVGLA-VAEGARLN-RASKIIG-VDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       204 ~~VlI~G~G~vG~~-a~~la~~~-G~~~Vi~-~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -+|.|+|.|.+|.. .+..++.. ++ ++++ .++++++..  ++++...++       .++.+.+.   ...+|+|+.|
T Consensus         8 ~rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~   74 (364)
T 3e82_A            8 INIALIGYGFVGKTFHAPLIRSVPGL-NLAFVASRDEEKVK--RDLPDVTVI-------ASPEAAVQ---HPDVDLVVIA   74 (364)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTE-EEEEEECSCHHHHH--HHCTTSEEE-------SCHHHHHT---CTTCSEEEEC
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCe-EEEEEEcCCHHHHH--hhCCCCcEE-------CCHHHHhc---CCCCCEEEEe
Confidence            37899999999985 66666655 67 6664 566665543  345433443       23332221   2379999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      +......+.+..++..  |+-|++..+.....-. ........  +..+.-..  .++....+..+.+++++|+|-
T Consensus        75 tp~~~H~~~~~~al~a--Gk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  146 (364)
T 3e82_A           75 SPNATHAPLARLALNA--GKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFH--NRRWDSDYLGIRQVIEQGTLG  146 (364)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--CCTTCHHHHHHHHHHHHTTTC
T ss_pred             CChHHHHHHHHHHHHC--CCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--ecccCHHHHHHHHHHHcCCCc
Confidence            9987778888888888  5656675422111000 01111222  44443221  233346788899999998774

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=95.10  E-value=0.037  Score=49.51  Aligned_cols=101  Identities=19%  Similarity=0.210  Sum_probs=67.1

Q ss_pred             HHhCCC-CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHH
Q 017335          196 KVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       196 ~~~~~~-~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~  267 (373)
                      ....++ ++++||-+|+|. |..+..+++.... +|++++.+++..+.+++    .+.   -.++..+-   .++   ..
T Consensus        42 ~~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~---~~~---~~  113 (259)
T 3lpm_A           42 KFSYLPIRKGKIIDLCSGN-GIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDL---KKI---TD  113 (259)
T ss_dssp             HHCCCCSSCCEEEETTCTT-THHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCG---GGG---GG
T ss_pred             HHhcCCCCCCEEEEcCCch-hHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcH---HHh---hh
Confidence            335677 899999998876 6677777777555 99999999988877754    342   23444332   222   11


Q ss_pred             HhcCCCccEEEECCC--------C------------------HHHHHHHHHHhccCCceEEEEc
Q 017335          268 EMTDGGADYCFECIG--------L------------------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       268 ~~~~~~~d~vid~~g--------~------------------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .+..+.||+|+....        .                  ...+..+.+.|+++ |+++.+-
T Consensus       114 ~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  176 (259)
T 3lpm_A          114 LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG-GKANFVH  176 (259)
T ss_dssp             TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC-cEEEEEE
Confidence            122348999996321        0                  23577888999997 9998863

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.10  E-value=0.13  Score=50.89  Aligned_cols=84  Identities=13%  Similarity=0.154  Sum_probs=53.6

Q ss_pred             CCCC--CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh-------HHHHHHHcCCceE-EcCCCCCCccHHHHHHH
Q 017335          200 VEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-------KFEIGKKFGITDF-INPATCGDKTVSQVIKE  268 (373)
Q Consensus       200 ~~~~--~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~-------~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~  268 (373)
                      ++++  .++||+|+ |++|...++.+...|+.+|+.+.++..       ..+.+++.|.... +..+-....++.+.+.+
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3455  89999988 999999888888889878888887632       1233445675432 22222111334344444


Q ss_pred             hcCC-CccEEEECCCC
Q 017335          269 MTDG-GADYCFECIGL  283 (373)
Q Consensus       269 ~~~~-~~d~vid~~g~  283 (373)
                      .... ++|+||++.|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence            3333 79999998874

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.10  E-value=0.058  Score=48.56  Aligned_cols=95  Identities=16%  Similarity=0.167  Sum_probs=60.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC--CCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~--G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +|||+|+ |.+|...++.+...  |. +|+++++++++...+...+.. ++..+- .+.   +.+.+... ++|+||.+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~-~~~~D~-~d~---~~l~~~~~-~~d~vi~~a   74 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVE-VRHGDY-NQP---ESLQKAFA-GVSKLLFIS   74 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCE-EEECCT-TCH---HHHHHHTT-TCSEEEECC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCe-EEEecc-CCH---HHHHHHHh-cCCEEEEcC
Confidence            5899998 99999999888877  88 899999988776655554543 332222 112   23333333 699999988


Q ss_pred             CCH-------HHHHHHHHHhccCC-ceEEEEcc
Q 017335          282 GLT-------SVMNDAFNSSREGW-GKTVILGV  306 (373)
Q Consensus       282 g~~-------~~~~~~~~~l~~~~-G~~v~~G~  306 (373)
                      +..       .....+++.++..+ ++++.++.
T Consensus        75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            741       12334555555431 37887765

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=95.09  E-value=0.11  Score=46.47  Aligned_cols=103  Identities=13%  Similarity=0.134  Sum_probs=66.4

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-------CC---ceEEcCCCCCCccHHH-HH
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-------GI---TDFINPATCGDKTVSQ-VI  266 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-------ga---~~vi~~~~~~~~~~~~-~i  266 (373)
                      ...+++++||-+|+|. |..++.+++.....+|++++.+++..+.+++.       +.   -.++..+-   .++.. ..
T Consensus        32 ~~~~~~~~VLDlG~G~-G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~---~~~~~~~~  107 (260)
T 2ozv_A           32 VADDRACRIADLGAGA-GAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADV---TLRAKARV  107 (260)
T ss_dssp             CCCCSCEEEEECCSSS-SHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCT---TCCHHHHH
T ss_pred             hcccCCCEEEEeCChH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCH---HHHhhhhh
Confidence            4567888999998865 66666777776323999999999988888652       21   23444443   23321 11


Q ss_pred             HH-hcCCCccEEEECCC------------------------CHHHHHHHHHHhccCCceEEEEc
Q 017335          267 KE-MTDGGADYCFECIG------------------------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~-~~~~~~d~vid~~g------------------------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .+ +..+.||+|+-...                        -...+..+.+.|+++ |+++++-
T Consensus       108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  170 (260)
T 2ozv_A          108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSG-GQLSLIS  170 (260)
T ss_dssp             HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            11 22347999996411                        123477788899997 9988763

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.08  E-value=0.13  Score=48.11  Aligned_cols=130  Identities=12%  Similarity=0.021  Sum_probs=81.6

Q ss_pred             CEEEEECCC-hHHHHHHHHHHHC--CCCeE-EEEcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          204 STVAIFGLG-AVGLAVAEGARLN--RASKI-IGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       204 ~~VlI~G~G-~vG~~a~~la~~~--G~~~V-i~~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      -+|.|+|+| .+|...+..++..  ++ ++ .+.++++++.+. ++++|...++       .++.+.+.   ...+|+|+
T Consensus        19 irvgiIG~G~~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~a~~~~~~~~~-------~~~~~ll~---~~~vD~V~   87 (340)
T 1zh8_A           19 IRLGIVGCGIAARELHLPALKNLSHLF-EITAVTSRTRSHAEEFAKMVGNPAVF-------DSYEELLE---SGLVDAVD   87 (340)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTTTTTE-EEEEEECSSHHHHHHHHHHHSSCEEE-------SCHHHHHH---SSCCSEEE
T ss_pred             eeEEEEecCHHHHHHHHHHHHhCCCce-EEEEEEcCCHHHHHHHHHHhCCCccc-------CCHHHHhc---CCCCCEEE
Confidence            378999999 7898777777665  46 55 456677777655 4567764454       23433332   23799999


Q ss_pred             ECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH------Hhh--CcEEEEeecCCCCchhHHHHHHHHHHcC
Q 017335          279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE------ILK--GRSVCGTYFGGLKPRSDIATLAQKYLDK  350 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~------~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g  350 (373)
                      .|+....-.+.+..+++.  |+-|++..+.     ..+..+      ...  +..+.-..  .++....+..+.+++++|
T Consensus        88 i~tp~~~H~~~~~~al~a--GkhVl~EKPl-----a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~g  158 (340)
T 1zh8_A           88 LTLPVELNLPFIEKALRK--GVHVICEKPI-----STDVETGKKVVELSEKSEKTVYIAE--NFRHVPAFWKAKELVESG  158 (340)
T ss_dssp             ECCCGGGHHHHHHHHHHT--TCEEEEESSS-----SSSHHHHHHHHHHHHHCSSCEEEEC--GGGGCHHHHHHHHHHHTT
T ss_pred             EeCCchHHHHHHHHHHHC--CCcEEEeCCC-----CCCHHHHHHHHHHHHHcCCeEEEEe--cccCCHHHHHHHHHHhcC
Confidence            999877668888888887  5556665422     222222      222  44443222  222346788888999998


Q ss_pred             CCC
Q 017335          351 VHL  353 (373)
Q Consensus       351 ~i~  353 (373)
                      +|-
T Consensus       159 ~iG  161 (340)
T 1zh8_A          159 AIG  161 (340)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            763

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=95.07  E-value=0.015  Score=55.51  Aligned_cols=101  Identities=18%  Similarity=0.188  Sum_probs=58.6

Q ss_pred             hHHHHHHH-HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC---ceEEcCCCCCCc
Q 017335          189 TGVGAAWK-VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI---TDFINPATCGDK  260 (373)
Q Consensus       189 ta~~~~~~-~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga---~~vi~~~~~~~~  260 (373)
                      .+|+.++. .....+|++||-+|+|. |++.+.+ ...|+++|++++.++ -.+.++    .-|.   -.++..+-   .
T Consensus        69 ~aY~~Ai~~~~~~~~~k~VLDvG~Gt-GiLs~~A-a~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~---~  142 (376)
T 4hc4_A           69 DAYRLGILRNWAALRGKTVLDVGAGT-GILSIFC-AQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPV---E  142 (376)
T ss_dssp             HHHHHHHHTTHHHHTTCEEEEETCTT-SHHHHHH-HHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCT---T
T ss_pred             HHHHHHHHhCHHhcCCCEEEEeCCCc-cHHHHHH-HHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeee---e
Confidence            44543332 22345799999999975 6665544 456887999999875 333333    3343   23444433   2


Q ss_pred             cHHHHHHHhcCCCccEEEE-CCCC--------HHHHHHHHHHhccCCceEE
Q 017335          261 TVSQVIKEMTDGGADYCFE-CIGL--------TSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       261 ~~~~~i~~~~~~~~d~vid-~~g~--------~~~~~~~~~~l~~~~G~~v  302 (373)
                      ++      ..++++|+|+. ..+.        +..+...-+.|+++ |.++
T Consensus       143 ~~------~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~-G~~i  186 (376)
T 4hc4_A          143 TV------ELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEG-GLLL  186 (376)
T ss_dssp             TC------CCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEE-EEEE
T ss_pred             ee------cCCccccEEEeecccccccccchhhhHHHHHHhhCCCC-ceEC
Confidence            21      12348999994 3331        22344455789997 8765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	373
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-38
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-38
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	3e-38
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-37
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-35
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-34
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-34
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	8e-34
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	8e-33
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-32
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	3e-31
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-29
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	8e-24
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	8e-20
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	1e-19
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	2e-19
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	1e-18
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-18
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-16
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-16
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	4e-16
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	7e-15
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	4e-14
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	5e-13
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	2e-12
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	7e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	4e-11
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	5e-11
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	3e-10
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	3e-09
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	1e-06
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	0.001
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	0.001
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	0.002
d1dlja2	196	c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGD	0.003
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	0.004

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  133 bits (336), Expect = 2e-38
 Identities = 71/175 (40%), Positives = 98/175 (56%), Gaps = 1/175 (0%)

Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
           P    CL+ CG STG GAA K   V+ GST  +FGLG VGL+V  G +   AS+IIG+D+
Sbjct: 3   PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
           N +KFE     G T+ I+P     K +S+V+ EMT     Y FE IG    M DA  S  
Sbjct: 63  NKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
             +G +V++GV      ++ + + +  GR+  G  FGGLK R D+  L  ++L K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  133 bits (336), Expect = 3e-38
 Identities = 81/209 (38%), Positives = 105/209 (50%), Gaps = 14/209 (6%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGK I CKAA+   P KPL +E I V PPKA E+RIKIL + +C SD +  K        
Sbjct: 3   AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFP 62

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
            +     HEAVGVVES+G  V  VK  D V+P+F   CG CR CKSS SN C K   G +
Sbjct: 63  VILG---HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 119

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             +  D TSRF   +G  I++ +  S+FTEY+VV    V KI P I +            
Sbjct: 120 TGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFL--------- 169

Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
            V     +  +     +   G G   + +
Sbjct: 170 -VSTKLTLDQINKAFELLSSGQGVRSIMI 197

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  133 bits (334), Expect = 3e-38
 Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 2/171 (1%)

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
           +CL+ CG +TG GAA   A V  GST A+FGLG VG +   G +   AS+IIGV  + +K
Sbjct: 5   SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK 64

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
           F    + G T+ +NP    DK + +VI E T+GG DY  EC G    M +A  S+  G G
Sbjct: 65  FPKAIELGATECLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSG 123

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
            TV+LG+      + L+ + +L GRS+ G+ FGG K   +++ L   Y+ K
Sbjct: 124 VTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  131 bits (331), Expect = 1e-37
 Identities = 76/200 (38%), Positives = 105/200 (52%), Gaps = 3/200 (1%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
            GKVI+CKAA+     KPLVIEEIEV+ P A EIRIKI+ T +CH+D+          K 
Sbjct: 3   VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK--HKD 60

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PV+ GHE  G+VESVG  V E +  + V+P+F   CGECR C+S K+N C K      
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
           P++     +RF       +  FL  S+F++Y+VV+   V KI P + L         + +
Sbjct: 121 PDVMSPKETRFTCKGRK-VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLES 179

Query: 190 GVGAAWKVAGVEVGSTVAIF 209
              A   +   +   TV   
Sbjct: 180 VNDAIDLMKHGKCIRTVLSL 199

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  127 bits (319), Expect = 1e-35
 Identities = 81/199 (40%), Positives = 109/199 (54%), Gaps = 3/199 (1%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           A +VI+CKAA+    GKPL IEEIEV PPKA E+RIKI+ T++CH+D          P+ 
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSG--ADPEG 58

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PVI GH   G+VESVGE V ++K  D V+P++   CGEC+ C + K+N C K      
Sbjct: 59  CFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 118

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
             +  DGTSRF   KG  I H++  S+F+EY+VV    V KI P I +      +     
Sbjct: 119 KGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDE 177

Query: 190 GVGAAWKVAGVEVGSTVAI 208
              A   +   +   TV  
Sbjct: 178 INKAFELMHSGKSIRTVVK 196

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  124 bits (311), Expect = 1e-34
 Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
            GKVI+CKAAI    G PL IEEIEV PPKA E+RI+++ T +C +D+            
Sbjct: 3   QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFP 62

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
            +     HE  G+VESVG  V   K  D V+P F   C  C+ C S  +N C K      
Sbjct: 63  VVLG---HECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119

Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
                 +  D TSRF       I+HF+ +SSF++Y+VV   ++ ++     L +    + 
Sbjct: 120 PTIDQELMEDRTSRFTCKGRS-IYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHAL 178

Query: 186 GVSTGVGAAWKVAGVEVGSTVAI 208
              +       +  ++ G ++  
Sbjct: 179 PFES---INDAIDLMKEGKSIRT 198

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  122 bits (306), Expect = 4e-34
 Identities = 83/175 (47%), Positives = 108/175 (61%), Gaps = 1/175 (0%)

Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
           PL   CLL CG+STG GAA   A +E GS  A+FGLG VGLAV  G ++  AS+IIGVDI
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
           N +KF   K+FG T+ INP     K + +V+ EMTDGG DY FECIG   VM  A  +  
Sbjct: 62  NKDKFARAKEFGATECINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           +GWG +V++GV   G  I+    +++ GR+  GT FGG K    +  L  +Y+ K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  121 bits (304), Expect = 8e-34
 Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 1/175 (0%)

Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
           PL   CL+ CG STG G+A KVA V  GST A+FGLG VGL+V  G +   A++IIGVDI
Sbjct: 2   PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
           N +KF   K+ G T+ +NP     K + +V+ EM++GG D+ FE IG    M  A +  +
Sbjct: 62  NKDKFAKAKEVGATECVNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           E +G +VI+GV      +S+N + +L GR+  G  FGG K +  +  L   ++ K
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  118 bits (297), Expect = 8e-33
 Identities = 70/175 (40%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
            L   CL+ CG S+G GAA   A V  GST A+FGLG VGL+   G ++  AS+II +DI
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
           N EKF   K  G TD +NP    DK V  VI E+T GG DY  +C G    +  A + + 
Sbjct: 62  NGEKFPKAKALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
            GWG   ++G       +++ +++++ GRS+ GT+FGG K    +  L   Y +K
Sbjct: 121 LGWGSCTVVG--AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  119 bits (298), Expect = 1e-32
 Identities = 77/203 (37%), Positives = 105/203 (51%), Gaps = 11/203 (5%)

Query: 10  AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           AGKVI+CKAA+     KP  IEE+EV PPKA E+RIK++ T +C SD      +   P  
Sbjct: 3   AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL- 61

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
             PVI GHEA G+VES+GE V  V+  D V+P+F   CG+CR CK  + N C K      
Sbjct: 62  --PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK-NDLSM 118

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACLLSCGV 187
           P       +     +G  IHHFL  S+F++Y+VVD   V KI     L   I  +L    
Sbjct: 119 PRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFE- 177

Query: 188 STGVGAAWKVAGVEVGSTVAIFG 210
              +   + +  +  G ++    
Sbjct: 178 --KINEGFDL--LRSGESIRTIL 196

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  114 bits (287), Expect = 3e-31
 Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 5/176 (2%)

Query: 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234
           +P+ +   L CG+ TG GA      V   S+   +G GAVGL+    A++  AS II VD
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS 294
           I   + E+ K+ G T  IN      +     IKE+TDGG ++  E  G   ++    ++ 
Sbjct: 61  IVESRLELAKQLGATHVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 295 REGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLD 349
               GK  ++G    G+    +  ++L  G+++ G   G   P+  I  L + Y  
Sbjct: 118 GI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQ 172

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  109 bits (272), Expect = 3e-29
 Identities = 81/175 (46%), Positives = 109/175 (62%), Gaps = 2/175 (1%)

Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
           PL   CLL CGVSTG GAA   A VE GST A+FGLGAVGLA   G     A +II VD+
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
           NP+KFE  K FG TDF+NP     + +SQV+ +MT+GG D+  EC+G   VM +A  S  
Sbjct: 62  NPDKFEKAKVFGATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
           +GWG +V++G       ++   I+++ GR+  G+ FGG K +  +  + + YLDK
Sbjct: 121 KGWGVSVLVGW-TDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 95.4 bits (236), Expect = 8e-24
 Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 5/193 (2%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
            AA+    G    ++ +++  P+  E+ +K++ T +CH+D+           +PLP + G
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK---YPVPLPAVLG 61

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRD 135
           HE  G++E++G  V E++  D V+ + +  CG+C  C +     CS+F GR +       
Sbjct: 62  HEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEG 120

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
             +     +G V  HF   SSF  Y++    + VK+T   P                A  
Sbjct: 121 NHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAID 180

Query: 196 KVAGVEVGSTVAI 208
              G+ +   + I
Sbjct: 181 SRKGITLKPIIKI 193

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 83.8 bits (206), Expect = 8e-20
 Identities = 49/194 (25%), Positives = 75/194 (38%), Gaps = 26/194 (13%)

Query: 16  CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
            KAA+    G PL IEE++V  P   ++ +KI  + +CH+D+   +    +   PLP I 
Sbjct: 6   MKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP-PLPFIP 64

Query: 76  GHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
           GHE VG V +VG  V  VKE D V +P  +  CG C  C +     C             
Sbjct: 65  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQ---------- 114

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
                           +     + EY + D  +V  +  ++   I       ++  +   
Sbjct: 115 ------------QNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM 162

Query: 195 WKVAGVEVGSTVAI 208
              AG   G  V  
Sbjct: 163 --RAGQIEGRIVLE 174

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 83.7 bits (206), Expect = 1e-19
 Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)

Query: 14  IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
           ++  A +     +PLV +E E+       I ++IL   +C SDV  ++   + P++PLP+
Sbjct: 3   LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFR--GEDPRVPLPI 60

Query: 74  IFGHEAVGVVESVGEYVEEVKERD-----LVLPIFHRDCGECRDCKSSKSNTCSKFGRGY 128
           I GHE  G V  V     ++         L++      CGEC  CK SK        + Y
Sbjct: 61  ILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY 120

Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGV 187
             N    G S +  L+G           ++ + V+D  T V+K++  I   +   L    
Sbjct: 121 GIN---RGCSEYPHLRG----------CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN 165

Query: 188 STGVGAAWKVAGVEVGSTVAIF 209
                 A ++        V ++
Sbjct: 166 -----KALELMESREALKVILY 182

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.3 bits (205), Expect = 2e-19
 Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 22/198 (11%)

Query: 17  KAAICRIPGKPLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           +    +        ++ + +P      +I IKI    +C SD+           + +P++
Sbjct: 8   EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAG--HWGNMKMPLV 65

Query: 75  FGHEAVGVVESVGEYVEEVKE--RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
            GHE VG V  +G       +  + + +      C EC  CK+     C+KF   Y    
Sbjct: 66  VGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY 125

Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVG 192
                             +++   +  Y  V    VV I  +I +    +   GV     
Sbjct: 126 E---------------DGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF- 169

Query: 193 AAWKVAGVEVGSTVAIFG 210
              +   V    T+  + 
Sbjct: 170 ERMEKGDVRYRFTLVGYD 187

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 80.4 bits (197), Expect = 1e-18
 Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 18/193 (9%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KA       +PL   +I    P   +++I+I    +CHSD+   +  ++      P + G
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVR--SEWAGTVYPCVPG 59

Query: 77  HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           HE VG V +VG+ VE+    DLV +      C  C +C+    N C      Y    P +
Sbjct: 60  HEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDE 119

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAA 194
                             +  +++  VV   +V++I    I +  A  ++      +   
Sbjct: 120 P--------------GHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGD 165

Query: 195 WKVAGVEVGSTVA 207
            K   V    T+ 
Sbjct: 166 VKYRFVIDNRTLT 178

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 7/168 (4%)

Query: 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234
           +PL  A +++  ++TG   A ++A +E+GS+V + G+GAVGL    GA+L  A +IIGV 
Sbjct: 1   MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 59

Query: 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS 294
             P   E  K +G TD +N          QV+K     G D      G +  ++ A    
Sbjct: 60  SRPICVEAAKFYGATDILNY--KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMV 117

Query: 295 REGWGKTVILGVEMHGSPISLNSIE---ILKGRSVCGTYFGGLKPRSD 339
           + G G    +     G  + +  +E    +  +++ G    G + R++
Sbjct: 118 KPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 1e-16
 Identities = 31/200 (15%), Positives = 60/200 (30%), Gaps = 27/200 (13%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-TFWKSSTDLPKLPLPVIF 75
            + +   PG  L +E   +  P   E+ +++    +C SDV  +         +  P++ 
Sbjct: 9   LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 76  GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           GHEA G VE VG  V+ +K  D V             CK  + N          P     
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDG- 126

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
                               +   +   +     K+  ++   +        +     A+
Sbjct: 127 --------------------NLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKAL---EAF 163

Query: 196 KVAGVEVGSTVAIFGLGAVG 215
           +     +G  + +       
Sbjct: 164 ETFKKGLGLKIML-KCDPSD 182

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 74.2 bits (181), Expect = 2e-16
 Identities = 43/198 (21%), Positives = 70/198 (35%), Gaps = 29/198 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK------SSTDLPKLP 70
           +A      GKPL ++EI V  PK  ++ IK+    +CHSDV   +         +   + 
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 71  LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
           LPV  GHE  G +E VG+ V    + DLV     +  G C  C+  + + C         
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLC--------D 113

Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
           +    G +                  + EY +V     +     +   I   +    +  
Sbjct: 114 SPRWLGINFDGA--------------YAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159

Query: 191 VGAAWKVAGVEVGSTVAI 208
                +     +G  V I
Sbjct: 160 AIDNLENFKA-IGRQVLI 176

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 73.1 bits (178), Expect = 4e-16
 Identities = 45/195 (23%), Positives = 66/195 (33%), Gaps = 28/195 (14%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           KAA+     +PL I+E+E       E+ ++I                    K  LP+I G
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACG-VCHTDLHAAHGDWPVKPKLPLIPG 60

Query: 77  HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
           HE VG+VE VG  V  +K  D V +P  +  CG C  C S +   C              
Sbjct: 61  HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQ----------- 109

Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
                          +     + EY      +VVKI  +  + +  L    ++       
Sbjct: 110 -----------KNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLE--KINEVFDRML 156

Query: 196 KVAGVEVGSTVAIFG 210
           K  G   G  V    
Sbjct: 157 K--GQINGRVVLTLE 169

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 70.0 bits (170), Expect = 7e-15
 Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 4/176 (2%)

Query: 177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236
           L +  +  C  +T   A  +      G TV I G G +GL     AR   A  +I +  +
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 237 PEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR 295
           P + ++ ++ G    +N      +   + I ++T G GAD+  E  G +  + +     R
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 296 EGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFGGLKPRSDIATLAQKYLD 349
            G G   + GV +   P+     E  +LK  +  G +           ++  +   
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQ 177

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 68.1 bits (165), Expect = 4e-14
 Identities = 38/194 (19%), Positives = 71/194 (36%), Gaps = 24/194 (12%)

Query: 18  AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFG 76
           +A+       L +E+  +  PK  E+ +++    +C SDV +++       +   P++ G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           HEA G V  VG+ V+ +K+ D V       C  C+ CK  K N C               
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDL------------ 110

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
                           +  +   Y V       K+  +  +      S  +   V  A++
Sbjct: 111 ---------TFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFE 160

Query: 197 VAGVEVGSTVAIFG 210
            A  +  +T+ +  
Sbjct: 161 AARKKADNTIKVMI 174

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 64.3 bits (155), Expect = 5e-13
 Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 26/194 (13%)

Query: 17  KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVI 74
           KAA      KPL IE+++       +++ ++I    +CH+D+   +    +L +  LP  
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
            GHE VG +E V E VE +++ D V+       G C  C++ +   C         N+  
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHC--------ENLEF 112

Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
            G +                  F E+       V+K+   + + +       ++  +   
Sbjct: 113 PGLNIDGG--------------FAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158

Query: 195 WKVAGVEVGSTVAI 208
            K  G  +G  V I
Sbjct: 159 EK--GEVLGRAVLI 170

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 63.7 bits (154), Expect = 2e-12
 Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 21/163 (12%)

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
              LS  + TG   A   AGV  GSTV + G G VGLA A  ARL  A+ +I  D+NP +
Sbjct: 4   LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR 62

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGL--------------- 283
               K  G           D  + + I  +      D   + +G                
Sbjct: 63  LAHAKAQGFEIADLS---LDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP 119

Query: 284 TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSV 326
            +V+N     +R   GK  I G+ +   P ++++   +   S+
Sbjct: 120 ATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSI 161

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 61.8 bits (149), Expect = 7e-12
 Identities = 27/217 (12%), Positives = 60/217 (27%), Gaps = 30/217 (13%)

Query: 17  KAAICRIPGKPLVIEEIEV-------EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
           +  +    GK + +++I+               + +K++ T++C SD    +  T     
Sbjct: 3   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61

Query: 70  PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
            +        V       E ++      +   +    C  C++  +    T +    G  
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGV 187
                 G                      EY +V     +++K+           ++  V
Sbjct: 122 YGYVDMGDWTG---------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVV 166

Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL 224
              V +    A    G     F  G     V +  + 
Sbjct: 167 GVQVISLDD-APRGYG----EFDAGVPKKFVIDPHKT 198

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 4e-11
 Identities = 23/149 (15%), Positives = 61/149 (40%), Gaps = 9/149 (6%)

Query: 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242
           LS G+      A +  GV +G  V + G G +G+     A+   A++++  D++  +   
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 243 GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTV 302
            K+ G    +  +    + +++ ++       +   EC G  + +     ++R G     
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG---GT 123

Query: 303 ILGVEMHGSPISLNSIEI-LKGRSVCGTY 330
           ++ V +     ++  +   ++   + G +
Sbjct: 124 LVLVGLGSEMTTVPLLHAAIREVDIKGVF 152

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 58.8 bits (141), Expect = 5e-11
 Identities = 35/205 (17%), Positives = 60/205 (29%), Gaps = 35/205 (17%)

Query: 17  KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
           K        K L   E E     +++  ++ L  S C SD+               +I G
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVF--EGALGDRKNMILG 58

Query: 77  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
           HEAVG V  VG  V++ K  D V+           + ++      +    G++ +  +DG
Sbjct: 59  HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG 118

Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDI--THVVKITPHIPLGIACLLSCGVSTGVGAA 194
                               F EY  V+    ++  +   + L            G    
Sbjct: 119 V-------------------FGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHI 156

Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVA 219
                      + +       L  A
Sbjct: 157 --------EEALLLMKDKPKDLIKA 173

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 56.5 bits (135), Expect = 3e-10
 Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242
           LS GV      A + AGV++G+TV + G G +GL     A+   A  +        + E+
Sbjct: 12  LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEV 65

Query: 243 GKKFGITDFINPATCGDKTVSQVIK--EMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
            K  G    +      ++  S + +         +   +C G    +    N +R   G 
Sbjct: 66  AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGT 124

Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTY 330
            +++G+      + L +    +   +   +
Sbjct: 125 LMLVGMGSQMVTVPLVNA-CAREIDIKSVF 153

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.5 bits (127), Expect = 3e-09
 Identities = 37/162 (22%), Positives = 58/162 (35%), Gaps = 10/162 (6%)

Query: 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234
           IP  +A  L CG  T V +     G   G  V I GLG +G      ++    ++   + 
Sbjct: 1   IPSHLAAPLLCGGLT-VYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVIS 58

Query: 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG-LTSVMNDAFNS 293
            +  K E   K G   +I     GD        E      D    C   LT +  +    
Sbjct: 59  RSSRKREDAMKMGADHYIATLEEGD------WGEKYFDTFDLIVVCASSLTDIDFNIMPK 112

Query: 294 SREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335
           + +  G+ V + +      +SL     LK  S+  +  G +K
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGSIK 153

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 9/63 (14%), Positives = 22/63 (34%)

Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
          KA + +  G PL + ++     +  E+ +++    L  +D      +      P  +   
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGM 61

Query: 77 HEA 79
             
Sbjct: 62 EVV 64

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 24/155 (15%), Positives = 42/155 (27%), Gaps = 4/155 (2%)

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
           A        T   +  +V  +  G  V I          A        ++I     +  K
Sbjct: 3   AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 62

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
            E+  + G+    +         +  I E+TDG              +         G G
Sbjct: 63  REMLSRLGVEYVGD---SRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPG-G 118

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334
           + + LG +   +  SL    + K  S         
Sbjct: 119 RFIELGKKDVYADASLGLAALAKSASFSVVDLDLN 153

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 13 VIRCKAAICRIPGKP---LVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFW 60
          +I  +A +    G+P   L  +  E++       E+ +K L + +  SD+   
Sbjct: 1  MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQI 53

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 24/174 (13%), Positives = 47/174 (27%), Gaps = 6/174 (3%)

Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
           A        T      K   ++                +A        +K+IG     +K
Sbjct: 6   AAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK 65

Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
            +   K G    IN     ++ + + +KE+T G                 + +  +   G
Sbjct: 66  AQSALKAGAWQVINY---REEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRR-G 121

Query: 300 KTVILGVEMHGSPISLNSIEILKGRSV--CGTYFGGLKPRSDIATLAQKYLDKV 351
             V  G            I   KG       +  G +  R ++   + +    +
Sbjct: 122 LMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLI 175

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Length = 196

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

 Score = 36.1 bits (82), Expect = 0.003
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
           +A+ G G VGL++     L+  +++  VDI P K +
Sbjct: 3   IAVAGSGYVGLSLG--VLLSLQNEVTIVDILPSKVD 36

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 5/94 (5%)

Query: 17  KAAICRIPGKPLV--IEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
           +A +           ++ I ++     ++ +++  +S+ + D     +S    K+     
Sbjct: 5   QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKD---GLASIPDGKIVKTYP 61

Query: 75  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCG 108
           F          V       +E D V+   +    
Sbjct: 62  FVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGV 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	373
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.98
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.98
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.92
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.85
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.83
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.57
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.55
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.41
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.07
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.04
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.77
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.69
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.6
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.57
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.57
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.56
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.5
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.5
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.45
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.32
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.3
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.29
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.28
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.26
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.23
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.23
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.23
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.23
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.21
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.2
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.17
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.14
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.13
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.09
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.08
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.08
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.07
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.04
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.03
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.03
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.02
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.01
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.97
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.96
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.96
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.95
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.94
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.94
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.93
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.92
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.92
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.9
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.86
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.85
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.85
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.84
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.84
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.83
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.83
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.81
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.79
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.79
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.79
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.77
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.77
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.72
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.71
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.68
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.68
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.68
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.67
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.66
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.64
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.64
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.61
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.57
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.53
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.52
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.5
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.5
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.47
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.47
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.46
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.45
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.45
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.43
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.41
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.4
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.39
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.38
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.37
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.36
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.32
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.3
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.29
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.27
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.25
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.23
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.22
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.2
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.19
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.14
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.13
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.1
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.09
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	96.06
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.04
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.04
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.03
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.99
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.97
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.89
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.81
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.75
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.74
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	95.56
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.53
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.51
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.48
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.44
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.41
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.36
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.32
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.31
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.3
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	95.17
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.12
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	95.11
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.08
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.06
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.04
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.0
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.94
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.92
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.89
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.84
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.78
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.75
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.73
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.72
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.72
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.67
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.57
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.55
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.52
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	94.45
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.43
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.41
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	94.36
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.33
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.32
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.27
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.27
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	94.22
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.16
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.03
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	94.02
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.0
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.9
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.88
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.85
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.72
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	93.65
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.63
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.63
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.55
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.51
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.5
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.46
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.42
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.36
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	93.35
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.3
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.3
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.27
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.27
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.25
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.11
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.09
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.98
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.88
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.84
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	92.77
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.76
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	92.73
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	92.73
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.66
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.63
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	92.59
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.5
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.38
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.35
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.35
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.32
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.14
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.12
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	91.9
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.86
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.83
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	91.82
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.81
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.77
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	91.7
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	91.61
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.6
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.59
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.55
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.54
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.44
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.41
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.34
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	91.32
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	91.32
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.29
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	91.23
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	91.23
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.17
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.16
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.16
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.13
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.02
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.97
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.88
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	90.8
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	90.46
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.43
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	90.4
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	90.4
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.36
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	90.28
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	90.27
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.22
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.22
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.19
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.19
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.07
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.02
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	89.99
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	89.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	89.83
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	89.74
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	89.74
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.55
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	89.53
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	89.5
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.47
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.22
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.18
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.17
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.97
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.91
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	88.78
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	88.72
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.55
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.47
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.34
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.31
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	88.3
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	88.15
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	88.15
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.13
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	88.12
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	88.11
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.11
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	87.78
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	87.67
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	87.67
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.6
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	87.58
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.52
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	87.46
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	87.38
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.28
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	87.23
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.09
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	86.86
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.83
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	86.82
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.63
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.63
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	86.61
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	86.55
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.52
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	86.49
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	86.46
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.45
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	86.42
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	86.28
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.2
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.84
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	85.82
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.79
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	85.71
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	85.4
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.33
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	85.01
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	84.98
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	84.92
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	84.84
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.63
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	84.58
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.54
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.41
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	84.23
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	84.17
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	84.04
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	83.97
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.9
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	83.85
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	83.79
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	83.37
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.14
d1ej0a_	180	RNA methyltransferase FtsJ {Escherichia coli [TaxI	83.0
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.0
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	82.93
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	82.85
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	82.58
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	82.5
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.5
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	82.44
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	82.33
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.88
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	81.61
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	81.27
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	81.2
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.14
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	80.9
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	80.69
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	80.68
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	80.6
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	80.15
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	80.14
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	80.06

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=4.7e-38  Score=276.59  Aligned_cols=197  Identities=39%  Similarity=0.584  Sum_probs=178.1

Q ss_pred             CCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        10 ~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      -.+++++||+++.+++++|++++++.|+|+++||||||.++|||++|++.+.+.....  .+|.++|||++|+|+++|++
T Consensus         3 ~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~--~~p~i~GhE~~G~v~~vG~~   80 (199)
T d1cdoa1           3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD--GFPVVLGHEGAGIVESVGPG   80 (199)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTT--SCSEECCCCEEEEEEEECTT
T ss_pred             CCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccccc--ccccccccccceEEEEEcCC
Confidence            3578899999999999889999999999999999999999999999999999876665  79999999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  169 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  169 (373)
                      +++|++||||++.+...|+.|++|+.|++++|.+.......+...+|..+ ...++..++++++.|+|+||+.+++++++
T Consensus        81 v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~Ggfaey~~v~~~~~~  159 (199)
T d1cdoa1          81 VTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETR-FTCKGRKVLQFLGTSTFSQYTVVNQIAVA  159 (199)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCC-EEETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred             CceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccc-eeeccceeecccccCCceEEEEEchHHEE
Confidence            99999999999999999999999999999999998776555555556333 34466777788888999999999999999


Q ss_pred             EcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE
Q 017335          170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  209 (373)
Q Consensus       170 ~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~  209 (373)
                      ++|+++++++++++.+++.|++.++......+.|++|||+
T Consensus       160 ~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         160 KIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             ECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999999998888889999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=266.87  Aligned_cols=195  Identities=41%  Similarity=0.617  Sum_probs=172.2

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      ..|+|||+++.+++++|+++++|+|+|+++||||||.++|||++|+++++|.+...  .+|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~--~~p~v~GhE~~G~V~~vG~~V~   80 (197)
T d2fzwa1           3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG--CFPVILGHLGAGIVESVGEGVT   80 (197)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC--CSSBCCCCEEEEEEEEECTTCC
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccc--cccccCCcceeeEEEeecCCce
Confidence            35779999999999999999999999999999999999999999999999987666  7999999999999999999999


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      ++++||||++.+...|+.|.+|+.|.++.|.+.......+...+...++ ..+|.++.++.++|+|+||+.+|+.+++++
T Consensus        81 ~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~g~GgfAey~vvp~~~~~~v  159 (197)
T d2fzwa1          81 KLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKI  159 (197)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             ecCCCCEEEEccccccccccccccCccccCccccccccccccCCcccee-ccCCcceecccccccceeEEEechHHEEEC
Confidence            9999999999999999999999999999998865443345555543333 345677888888899999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  209 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~  209 (373)
                      |+++++++++.+.+++.|++.++.+...-+.+++|||+
T Consensus       160 p~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         160 DPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             CTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999999999999976566666788999884

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=4.2e-36  Score=264.80  Aligned_cols=195  Identities=36%  Similarity=0.599  Sum_probs=166.7

Q ss_pred             CCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335            9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      ++..+|||||+++.+++++++++++|.|+|+++||||||.++|||++|++.++|.++.   .+|.++|||++|+|+++|+
T Consensus         2 ~~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~---~~P~v~GHE~~G~V~~vG~   78 (202)
T d1e3ia1           2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA---LFPVVLGHECAGIVESVGP   78 (202)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC---CSSBCCCCEEEEEEEEECT
T ss_pred             CCCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc---ccccccccccceEEeeecC
Confidence            5678999999999999988999999999999999999999999999999999987764   5899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCC----CCCCCCCCccccccCCceecccccccceeeeEEee
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD  164 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~----~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~  164 (373)
                      +|+++++||||++.+...|+.|++|+.|+++.|.+......    .+...++..+ ...+|..++++++.|+|+||+.+|
T Consensus        79 ~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~v~~~~~~G~faey~~v~  157 (202)
T d1e3ia1          79 GVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR-FTCKGRSIYHFMGVSSFSQYTVVS  157 (202)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCS-EEETTEEEBCCTTTCCSBSEEEEE
T ss_pred             CceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccc-cccCceeeecccccCCceEEEEEe
Confidence            99999999999999999999999999999999988664210    1111222222 234567788888889999999999


Q ss_pred             ccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEEC
Q 017335          165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG  210 (373)
Q Consensus       165 ~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G  210 (373)
                      +..+++||++++++.++++.+++.+++.++ +  .+++|++|.|+.
T Consensus       158 ~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~-~--~~k~G~~V~vi~  200 (202)
T d1e3ia1         158 EANLARVDDEFDLDLLVTHALPFESINDAI-D--LMKEGKSIRTIL  200 (202)
T ss_dssp             GGGEEECCTTSCGGGGEEEEEEGGGHHHHH-H--HHHTTCCSEEEE
T ss_pred             hhhEEECCCCCCHHHHHHHHHHHHHHHHHH-H--hCCCCCEEEEEE
Confidence            999999999999999888888888888765 2  246899887763

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=2.3e-36  Score=264.30  Aligned_cols=192  Identities=24%  Similarity=0.496  Sum_probs=159.9

Q ss_pred             ccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335           13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE   92 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   92 (373)
                      +++|+|+++.+++++|+++++|.|+|+++||||||.++|||++|++++.|.++.   .+|+++|||++|+|+++|++|++
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~---~~P~i~GHE~~G~V~~vG~~v~~   77 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV---PLPAVLGHEGSGIIEAIGPNVTE   77 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc---cCCcccccceEEEeeecCcccee
Confidence            367999999999989999999999999999999999999999999999988664   68999999999999999999999


Q ss_pred             cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccc-cCCceecccccccceeeeEEeeccceEEc
Q 017335           93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE-LKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~-~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      |++||||+..+ ..|+.|++|++|++++|++.......|...+|...+.. ..+.+..++++.|+|+||..+++.+++++
T Consensus        78 ~~vGDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          78 LQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             CCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             EccCceeeeec-ccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            99999996654 58999999999999999986433234555555433322 22334457778899999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGV  233 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~  233 (373)
                      |++++++++                         +++.|+|++|++++|+++.+|+++|+++
T Consensus       157 p~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         157 TKDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CTTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            999887654                         3456779999999999999999777765

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=8.6e-36  Score=256.96  Aligned_cols=174  Identities=27%  Similarity=0.378  Sum_probs=157.1

Q ss_pred             CcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335           11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV   90 (373)
Q Consensus        11 ~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v   90 (373)
                      ++|.||||+++++++++++++++|.|.|+++||||||.++|||++|++.+.|.++... .+|.++|||++|+|+++|+++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~-~~P~i~GhE~~G~V~~~G~~v   79 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP-PLPFIPGHEGVGYVAAVGSGV   79 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCC-CSSBCCCSCEEEEEEEECTTC
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccc-cCCcCCCCcceEEEEEeCCCc
Confidence            4799999999999998899999999999999999999999999999999999875433 789999999999999999999


Q ss_pred             CccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335           91 EEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  169 (373)
Q Consensus        91 ~~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  169 (373)
                      +++++||||++.+. ..|+.|++|+.|++++|.+...   .|+..+|                   +|+||+.+++++++
T Consensus        80 ~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~~~g-------------------g~aey~~v~~~~~~  137 (175)
T d1llua1          80 TRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYSVNG-------------------GYAEYVLADPNYVG  137 (175)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSE
T ss_pred             cccccCCEEEeccccccCCccccccCCcccccccccc---ccccccc-------------------ccceEEEechHHEE
Confidence            99999999988764 5799999999999999998876   6777778                   99999999999999


Q ss_pred             EcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE
Q 017335          170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  209 (373)
Q Consensus       170 ~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~  209 (373)
                      ++|++++++.++++.+++.|+++.+ +.. ..+|++|||+
T Consensus       138 ~iPd~l~~~~a~~~~~~~~t~~~~~-~~g-~~~G~~VLVl  175 (175)
T d1llua1         138 ILPKNVKATIHPGKLDDINQILDQM-RAG-QIEGRIVLEM  175 (175)
T ss_dssp             ECCTTCCCCEEEECGGGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred             ECCCCCChhHHHHHHhHHHHHHHHH-HhC-CCCCCEEEeC
Confidence            9999999998988888999998854 444 4479999985

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=4.2e-36  Score=259.61  Aligned_cols=173  Identities=24%  Similarity=0.358  Sum_probs=153.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC-CCCCCccccCcccEEEEEeCCCCCccC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      |.|++++++++ |+++++|+|+|+++||||||.++|||++|++.+.+..... ...+|+++|||++|+|+++|+++++|+
T Consensus         2 ~maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           2 NLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            34556778877 9999999999999999999999999999999887654222 126789999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||||++.+...|+.|+.|..|++++|++....  .+...+|                   +|+||+.+|+++++++|++
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~G-------------------~~aey~~v~~~~~~~iP~~  139 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATPPDDG-------------------NLARYYVHAADFCHKLPDN  139 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBTTBCC-------------------SCBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECcccccCCccccccCCccccccccce--ecccccc-------------------ccceeeeecccceeeCCCC
Confidence            999999999999999999999999999887762  3333455                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL  211 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~  211 (373)
                      +++++++.+++++.|||++ ++.+++++|++|+|+|+
T Consensus       140 ~~~~~aa~~~~~~~ta~~a-~~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         140 CNVKQLVTHSFKLEQTVDA-FEAARKKADNTIKVMIS  175 (178)
T ss_dssp             CCCGGGEEEEEEGGGHHHH-HHHHHHCCTTCSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHH-HHHhCCCCCCEEEEEcc
Confidence            9999999999999999996 57889999999999975

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=3.6e-35  Score=257.58  Aligned_cols=193  Identities=44%  Similarity=0.657  Sum_probs=164.3

Q ss_pred             CCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        10 ~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      +....||||+++++++++|+++++|.|+|+++||||||.++|||++|+++++|..+.   .+|.++|||++|+|+++|++
T Consensus         3 ~~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~---~~P~i~GHE~~G~Vv~~G~~   79 (198)
T d1p0fa1           3 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS---KFPVILGHEAVGVVESIGAG   79 (198)
T ss_dssp             TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSBCCCCCEEEEEEEECTT
T ss_pred             CCCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc---ccccccceeeeeeeeecCcc
Confidence            456789999999999988999999999999999999999999999999999987754   68999999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  169 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  169 (373)
                      ++++++||||++.+...|+.|++|++|.+++|+........|...++..++ ...+..++...+.|+|+||+.+++..++
T Consensus        80 v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~g~faey~~v~~~~~~  158 (198)
T d1p0fa1          80 VTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRF-TCRGKPIYNLMGTSTFTEYTVVADIAVA  158 (198)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSE-EETTEEEBCSTTTCCSBSEEEEETTSEE
T ss_pred             cccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeE-eeCCeeccccCCCccceeeEEecHHHEE
Confidence            999999999999999999999999999999999887754455555554433 4566777777778999999999999999


Q ss_pred             EcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHH
Q 017335          170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGL  216 (373)
Q Consensus       170 ~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~  216 (373)
                      ++|++++++.++...+.+.+..          ++++|||.|+|++|+
T Consensus       159 kip~~~~~~~~~~~~~~~~~v~----------~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         159 KIDPKINVNFLVSTKLTLDQIN----------KAFELLSSGQGVRSI  195 (198)
T ss_dssp             EECTTSCGGGGEEEEECGGGHH----------HHHHHTTTSSCSEEE
T ss_pred             ECCCCCCHHHHHHhhcchhhcC----------CCCEEEEECCCcceE
Confidence            9999999887766554444332          234577888887765

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=8.4e-35  Score=249.60  Aligned_cols=168  Identities=24%  Similarity=0.398  Sum_probs=153.5

Q ss_pred             eeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCC-CCCCCccccCcccEEEEEeCCCCCccC
Q 017335           17 KAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        17 ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      ||+++.+++++|++++++.|++ .++||||||.+++||++|++.+.|..+.. ...+|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7999999999999999999986 68999999999999999999998875321 126899999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||||++.+...|+.|..|+.|.+++|.+...   .|+..+|                   +|+||+.+|+++++++|++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  138 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFAEFMRTSHRSVIKLPKD  138 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEECGGGEEECCTT
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccc---ceeeccc-------------------ccceeeeehhhcceecCCC
Confidence            99999999999999999999999999998876   7888888                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEE
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAI  208 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI  208 (373)
                      ++++.++++.+++.|||+++ +.+.+ .|++|||
T Consensus       139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            99998998888999999975 66777 8999998

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=3.8e-34  Score=251.36  Aligned_cols=195  Identities=40%  Similarity=0.616  Sum_probs=165.8

Q ss_pred             CCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335            9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus         9 ~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      +..++++|||+++.+++++|++++++.|+|+++||||||.++|||++|++.++|.++.   .+|.++|||++|+|+++|+
T Consensus         2 ~~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~---~~P~i~GHE~~G~Vv~vG~   78 (198)
T d2jhfa1           2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGE   78 (198)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECT
T ss_pred             CCCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc---ccceecccceeEEEEecCc
Confidence            4567899999999999988999999999999999999999999999999999998765   5899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  168 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  168 (373)
                      +++++++||||++.+...|+.|.+|+.|.+++|.........|...++. .....++.+++++.++|+|+||+++|+.++
T Consensus        79 ~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~  157 (198)
T d2jhfa1          79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGT-SRFTCRGKPIHHFLGTSTFSQYTVVDEISV  157 (198)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSC-CSEEETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred             cccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCcc-ccccccCceeccCCCCCcccCeEEeCHHHe
Confidence            9999999999999999999999999999999999988764445444442 233567788888888999999999999999


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEEC
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG  210 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G  210 (373)
                      +++|++++++.++....++.+...   ....+++|++|+|+.
T Consensus       158 ~~~p~~~~~e~l~~~~~~~~~v~~---g~~~l~~G~~VaVi~  196 (198)
T d2jhfa1         158 AKIDAAFALDPLITHVLPFEKINE---GFDLLRSGESIRTIL  196 (198)
T ss_dssp             EECCTTSCCGGGEEEEEEGGGHHH---HHHHHHTTCCSEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHhhhh---CCceeeCCCEEEEEE
Confidence            999999988777665545444332   122367899988763

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.9e-34  Score=248.36  Aligned_cols=175  Identities=26%  Similarity=0.376  Sum_probs=146.9

Q ss_pred             cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      |+++|||++++++++++++++++.|+|+++||||||.++|||++|+++++|..+..  .+|+++|||++|+|+++|++|+
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~--~~P~vlGHE~~G~V~~vG~~v~   78 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV--PLPIILGHEGAGRVVEVNGEKR   78 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEESSCCB
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCcc--ccccccceeeeeeeeEEecccc
Confidence            68899999999999889999999999999999999999999999999999987665  7999999999999999999986


Q ss_pred             -----ccCCCCEEEeeCCCCCCCCccccCCCCC-cCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEee-
Q 017335           92 -----EVKERDLVLPIFHRDCGECRDCKSSKSN-TCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-  164 (373)
Q Consensus        92 -----~~~~Gd~V~~~~~~~c~~c~~c~~g~~~-~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~-  164 (373)
                           .+++||||++.+..+|++|++|+.|++. .|++...   .|+...- .++          ..-.|+|+||+.++ 
T Consensus        79 ~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~---~G~~~~~-~~~----------~~~~Gg~ae~~~v~~  144 (184)
T d1vj0a1          79 DLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGC-SEY----------PHLRGCYSSHIVLDP  144 (184)
T ss_dssp             CTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCS-SST----------TCCCSSSBSEEEECT
T ss_pred             ccccccccceeeeEeccccccccChhHhCccccccCCCcee---eccCCCC-CCC----------CCcceeCcCcEEech
Confidence                 4689999999999999999999999965 5877654   4432100 000          01124999999995 


Q ss_pred             ccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE
Q 017335          165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  209 (373)
Q Consensus       165 ~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~  209 (373)
                      +++++++|+++++++      ++.+|+++ .+.+.+++|++|||+
T Consensus       145 ~~~v~~ip~~l~~~~------pl~~A~~a-~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         145 ETDVLKVSEKITHRL------PLKEANKA-LELMESREALKVILY  182 (184)
T ss_dssp             TCCEEEECTTCCEEE------EGGGHHHH-HHHHHHTSCSCEEEE
T ss_pred             hHcEEECCCCCCHHH------HHHHHHHH-HHHhCCCcCCEEEEe
Confidence            689999999998653      45677775 577899999999997

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-34  Score=248.76  Aligned_cols=172  Identities=20%  Similarity=0.301  Sum_probs=149.2

Q ss_pred             ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      +++|++++++++ |+++++|.|+|+++||||||.++|||++|++.+++.... ....+|.++|||++|+|+++|+++++|
T Consensus         7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            678999999987 999999999999999999999999999999998764321 112688999999999999999999999


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  172 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  172 (373)
                      ++||||++.+...|+.|++|+.|++++|.+..+   .|.. .+|                   +|+||+.++.++++++|
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~---~g~~~~~G-------------------~~aey~~~~~~~~~~lP  143 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG-------------------NLCRFYKHNAAFCYKLP  143 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC-------------------SCBSEEEEEGGGEEECC
T ss_pred             cccccceecceeccccchhhccchhchhcccee---eecccccc-------------------cceEEEEEchHHEEECC
Confidence            999999999999999999999999999988776   3333 445                   89999999999999999


Q ss_pred             CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCCh
Q 017335          173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA  213 (373)
Q Consensus       173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~  213 (373)
                      ++++++++++++  +.+|+++ ++..++++|++||| |+|+
T Consensus       144 ~~~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         144 DNVKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             TTCGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             CCCCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence            999999987654  5667774 56778999999998 6654

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-33  Score=246.17  Aligned_cols=176  Identities=22%  Similarity=0.264  Sum_probs=152.2

Q ss_pred             cccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335           12 KVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        12 ~~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      .|.||||+++..+++.  +++.+++.++++++||||||.++|||++|++.+.|.++..  .+|+++|||++|+|+++|++
T Consensus         3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~--~~P~i~GHE~~G~Vv~vG~~   80 (192)
T d1piwa1           3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--KMPLVVGHEIVGKVVKLGPK   80 (192)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC--CSSEECCCCEEEEEEEECTT
T ss_pred             CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCC--CCCcCcccccccchhhcccc
Confidence            5789999999988653  6778887777899999999999999999999999987766  79999999999999999998


Q ss_pred             C-CccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCC----CCCCCCCCCccccccCCceecccccccceeeeEEe
Q 017335           90 V-EEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV  163 (373)
Q Consensus        90 v-~~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v  163 (373)
                      + +.+++||||.+.+. ..|+.|.+|+.|++++|++....+    ..|+..+|                   +|+||+.+
T Consensus        81 v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~G-------------------gfaey~~v  141 (192)
T d1piwa1          81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQG-------------------GYANYVRV  141 (192)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCC-------------------SSBSEEEE
T ss_pred             cccccCCCCeeeEeeeccCCCCchhhhcCCccccccccccccccccccccccc-------------------ceeeEEEe
Confidence            7 56999999987775 469999999999999999876531    12444455                   99999999


Q ss_pred             eccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE
Q 017335          164 DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  209 (373)
Q Consensus       164 ~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~  209 (373)
                      |+++++++|++++++.|+.+.+.+.|||+++ ++++++++++|||.
T Consensus       142 ~~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         142 HEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             EGGGEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             ehHHeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            9999999999999998877776688999965 78999999999974

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=5.4e-35  Score=251.69  Aligned_cols=170  Identities=19%  Similarity=0.141  Sum_probs=143.2

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++.++++ ++++++|.|.|+++||||||.++|||++|++.+.+.....  .+|.++|||++|+|+++|++|++|++
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~--~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--RKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCC--CSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCC--CCCccCcceeeEEeeecccccceecC
Confidence            89999999998 9999999999999999999999999999998887655555  78999999999999999999999999


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec--cceEEcCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI--THVVKITP  173 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~~lP~  173 (373)
                      ||||++.+...|++|.+|+.|++++|.+.......|...+|                   +|+||+.+|.  .+++++|+
T Consensus        78 GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G-------------------~~aEy~~vp~a~~~l~~iP~  138 (177)
T d1jqba1          78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG-------------------VFGEYFHVNDADMNLAILPK  138 (177)
T ss_dssp             TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCC-------------------SSBSSEEESSHHHHCEECCT
T ss_pred             CCcEEEeeeeccccccchhhhhhcccccccccccccCCCCh-------------------hcCeeEEEEhhhCeEEECCC
Confidence            99999999999999999999999999887654344555666                   9999999985  47999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHH
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV  218 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a  218 (373)
                      ++++++++........+   +        ++.|+|+|+|++|+.+
T Consensus       139 ~~~~~~~~~~~~~~~~~---~--------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         139 DVDLSKLVTHVYHGFDH---I--------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             TSCGGGGEEEEEESGGG---H--------HHHHHHHHHCCTTCSE
T ss_pred             CcchHHHHHHHHHHHHH---h--------cCceEEECCCHHHhhe
Confidence            99988876544332222   1        2336677777766543

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=1.2e-32  Score=236.29  Aligned_cols=169  Identities=27%  Similarity=0.396  Sum_probs=146.9

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||+++++++++|++++++.|+|++|||||||.++|||++|++.+.+...... .+|.++|||++|+|+++|++++++++
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~-~~p~v~GhE~~G~Vv~vG~~v~~~~v   79 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP-KLPLIPGHEGVGIVEEVGPGVTHLKV   79 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeeccccccc-ccccccCCEEEEEEEEecccccCcee
Confidence            89999999998899999999999999999999999999999998886643333 78999999999999999999999999


Q ss_pred             CCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           96 RDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        96 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      ||||++.+. ..|+.|..|..+.+++|.+...   .|...+|                   +|+||+.+|+++++++|++
T Consensus        80 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  137 (171)
T d1rjwa1          80 GDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDN  137 (171)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTT
T ss_pred             eeEEeeccccccccccccccCCCccccccccc---cceeccC-------------------ccccceEecHHHEEECCCC
Confidence            999988764 5689999999999999998876   6777777                   9999999999999999999


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL  211 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~  211 (373)
                      ++++.|+ +. .+.++++.+. .+.+ +|++|||+|.
T Consensus       138 ~~~e~A~-l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         138 TIIEVQP-LE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             CCEEEEE-GG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             CCHHHHH-HH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            9987654 44 5566776543 3455 5999999985

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.98  E-value=3.3e-35  Score=258.13  Aligned_cols=191  Identities=21%  Similarity=0.248  Sum_probs=153.7

Q ss_pred             eeeEEeecCCCCeEEEEEecCCC-------CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPP-------KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE   88 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~-------~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~   88 (373)
                      +||++++++++ +++++++.|++       .++||||||.++|||++|++.++|..+.   .+|.++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~---~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA---QVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC---CTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc---ccceeccceeeeeeecccc
Confidence            69999999998 99999999875       4699999999999999999999988764   6899999999999999999


Q ss_pred             CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec--c
Q 017335           89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI--T  166 (373)
Q Consensus        89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~  166 (373)
                      +|++|++||||++.+..+|++|++|++|+++.|.........+.....            ....-.|+|+||+.+|.  .
T Consensus        78 ~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~------------~~~~~~Gg~aeyv~vp~~~~  145 (201)
T d1kola1          78 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV------------DMGDWTGGQAEYVLVPYADF  145 (201)
T ss_dssp             TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT------------TSCCBCCCSBSEEEESSHHH
T ss_pred             ccccccccceeEEeeeeeccCChhhhCCCccccccccccccccccccc------------CCCccccccccEEEeehHHC
Confidence            999999999999999999999999999999999776543111111000            00001249999999984  4


Q ss_pred             ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC
Q 017335          167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA  227 (373)
Q Consensus       167 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~  227 (373)
                      ++++|||+..+.+++++..++.++++++ +....+.+    ++|+|++|++++|+||++|+
T Consensus       146 ~l~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         146 NLLKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HCEECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             eEEECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            7999999877777777777788777753 33333333    25889999999999999885

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.98  E-value=2.1e-32  Score=235.98  Aligned_cols=169  Identities=27%  Similarity=0.394  Sum_probs=144.2

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC------CCCCCCccccCcccEEEEEeCCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------PKLPLPVIFGHEAVGVVESVGEY   89 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~vG~~   89 (373)
                      |||++++++|++|++++++.|+|+++||||||.++|||++|++.++|.++.      ....+|+++|||++|+|+++|+.
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            899999999988999999999999999999999999999999999886432      11268999999999999999999


Q ss_pred             CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc-e
Q 017335           90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-V  168 (373)
Q Consensus        90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-~  168 (373)
                      +++|++||||++.+...|+.|.+|+.|+++.|++...   .|+..+|                   +|+||+.++... +
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~vp~~~~~  138 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYM  138 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcce---eeecccc-------------------ccccEEEEEhHHeE
Confidence            9999999999999999999999999999999998875   6777788                   999999997655 5


Q ss_pred             EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEE
Q 017335          169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAI  208 (373)
Q Consensus       169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI  208 (373)
                      +++|+..+.+.++....++.++++++ ...++ .|++|||
T Consensus       139 ~~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         139 YKLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             EECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            56665555444444456888999865 55555 5899987

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.8e-31  Score=228.78  Aligned_cols=165  Identities=24%  Similarity=0.304  Sum_probs=133.9

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||++..+++++|++++++.|+|++|||||||.++|||++|++.+.|..+..  .+|+++|||++|+|+++|++|+++++
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~--~~P~i~GhE~~G~V~~vG~~V~~~~v   78 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT--VYPCVPGHEIVGRVVAVGDQVEKYAP   78 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC--CSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccc--cccccccccccccchhhccccccCCC
Confidence            8999999999999999999999999999999999999999999999987666  79999999999999999999999999


Q ss_pred             CCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           96 RDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        96 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      ||||.+.+. ..|+.|++|+.|++++|++....+.......+              ....|+|+||+.+|+++++++|+.
T Consensus        79 GdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~--------------~~~~GgfaEy~~v~~~~~~~ip~~  144 (179)
T d1uufa1          79 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP--------------GHTLGGYSQQIVVHERYVLRIRVA  144 (179)
T ss_dssp             TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTT--------------SBCCCSSBSEEEEEGGGCEECCCC
T ss_pred             CCEEEEcccccccCccccccCcccccCCCccccccccCCCCC--------------cccccccceEEEechHHEEECCCC
Confidence            999987774 58999999999999999986543211111111              111349999999999999999966


Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGV  200 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~  200 (373)
                      ....  +.. .++.++++++ .++.+
T Consensus       145 ~~~~--~~a-~~l~~a~~a~-~~a~v  166 (179)
T d1uufa1         145 DIEM--IRA-DQINEAYERM-LRGDV  166 (179)
T ss_dssp             CEEE--ECG-GGHHHHHHHH-HTTCS
T ss_pred             CcCh--hHh-chhHHHHHHH-HHhCc
Confidence            5332  222 2566777755 33444

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=2.9e-29  Score=215.56  Aligned_cols=173  Identities=30%  Similarity=0.516  Sum_probs=161.1

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      ++++.|+.++|.+.|||+++++..++++|++|+|+|+|++|++++|+||.+|+++|++++++++|++.++++|+++++|+
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35788999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      ++   +++.+++++++++++|+||||+|++.+++.+++.++++ |+++.+|........+++...++. +++++|+..++
T Consensus        81 ~~---~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~  156 (174)
T d1f8fa2          81 KT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS  156 (174)
T ss_dssp             TT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred             CC---cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecC
Confidence            88   89999999999889999999999998899999999997 999999986666677899988887 99999999888


Q ss_pred             CCchhHHHHHHHHHHcCC
Q 017335          334 LKPRSDIATLAQKYLDKV  351 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~  351 (373)
                      ...+++++++++++++||
T Consensus       157 ~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         157 GSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             SCHHHHHHHHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHcCC
Confidence            887899999999999986

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.6e-29  Score=206.97  Aligned_cols=146  Identities=19%  Similarity=0.248  Sum_probs=130.6

Q ss_pred             ceeeEEeecCCCC--eEEE-EEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           15 RCKAAICRIPGKP--LVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        15 ~~ka~~~~~~~~~--l~~~-~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      -|||+++++.|.+  ++++ ++|.|+|++|||||||.+++||++|.+.+.|.+.... .+|.++|||++|+|+++|++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~-~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKP-LLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCC-CSSBCCCSCEEEEEEEECTTCT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccc-cccccCccceeeeeEeecceee
Confidence            4899999987765  7775 6899999999999999999999999999998775543 7899999999999999999999


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      +|++||||+....                             .+|                   +|+||+.+|++.++++
T Consensus        81 ~~~vGdrV~~~~~-----------------------------~~G-------------------~~ae~~~v~~~~~~~i  112 (150)
T d1yb5a1          81 AFKKGDRVFTSST-----------------------------ISG-------------------GYAEYALAADHTVYKL  112 (150)
T ss_dssp             TCCTTCEEEESCC-----------------------------SSC-------------------SSBSEEEEEGGGEEEC
T ss_pred             ccccCcccccccc-----------------------------ccc-------------------cccccccccccccccc
Confidence            9999999975432                             123                   9999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  209 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~  209 (373)
                      |+++++++||++++...|+|.+++..+....|+++||+
T Consensus       113 P~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         113 PEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             CTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             cCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            99999999999999999999999888899999999985

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=1.3e-27  Score=205.04  Aligned_cols=173  Identities=40%  Similarity=0.683  Sum_probs=150.7

Q ss_pred             hhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCC
Q 017335          177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  256 (373)
Q Consensus       177 ~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~  256 (373)
                      |.+||++.|++.|+|+++++.+++++|++|+|+|+|++|++++|++|.+|+++|++++++++|+++++++|+++++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            56799999999999999889999999999999999999999999999999889999999999999999999999999876


Q ss_pred             CCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCCc
Q 017335          257 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP  336 (373)
Q Consensus       257 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  336 (373)
                       .+....+..+..+++++|++||++|...+++.++..+++++|+++.+|.......++++...++++++|+|+.++++. 
T Consensus        82 -~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~-  159 (174)
T d1p0fa2          82 -YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-  159 (174)
T ss_dssp             -CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-
T ss_pred             -chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC-
Confidence             122244455555555999999999999989999998876338999999876667788887777778999999988875 


Q ss_pred             hhHHHHHHHHHHcCC
Q 017335          337 RSDIATLAQKYLDKV  351 (373)
Q Consensus       337 ~~~~~~~~~~~~~g~  351 (373)
                      .++++++++++++||
T Consensus       160 ~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         160 GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            569999999999987

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=3.5e-27  Score=202.23  Aligned_cols=173  Identities=40%  Similarity=0.770  Sum_probs=150.8

Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      +++.||.+.|.+.|+|+++.+.+++++|++|+|+|+|++|++++|++|.+|+++|++++.+++|++.++++|+++++|+.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            56889999999999999998999999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK  335 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (373)
                      . .+...........++++|++|||+|.+.+++.+++++++++|+++.+|...  ...+++...++.+++|+|+..+++.
T Consensus        82 ~-~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~--~~~~i~~~~~~~~k~i~Gs~~Gs~~  158 (174)
T d1e3ia2          82 E-LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVILGRSINGTFFGGWK  158 (174)
T ss_dssp             G-CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHTTCEEEECSGGGCC
T ss_pred             c-chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC--CccccchHHHhccCEEEEEEeeCCC
Confidence            5 122333344444445999999999999999999999998329999999753  3567887777778899999999988


Q ss_pred             chhHHHHHHHHHHcCC
Q 017335          336 PRSDIATLAQKYLDKV  351 (373)
Q Consensus       336 ~~~~~~~~~~~~~~g~  351 (373)
                      ++++++++++++++||
T Consensus       159 ~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         159 SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHCcC
Confidence            8999999999999987

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=7.5e-28  Score=202.01  Aligned_cols=149  Identities=16%  Similarity=0.146  Sum_probs=127.5

Q ss_pred             cceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           14 IRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        14 ~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      .+|||+++++++++  +++++++.|+|++|||||||.++|||++|++.+.|.++... ..|+++|||++|+|++  ..++
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~-~~p~v~g~e~~G~v~~--~~~~   78 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVK-TYPFVPGIDLAGVVVS--SQHP   78 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCC-SSSBCCCSEEEEEEEE--CCSS
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccc-cccceeeeeeeeeeec--cCCC
Confidence            57999999998876  56889999999999999999999999999999888765543 7899999999999999  4456


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      .+++||+|.....                        ..+...+|                   +|+||+.+|++.++++
T Consensus        79 ~~~~g~~v~~~~~------------------------~~~~~~~G-------------------~~aEy~~v~~~~~~~i  115 (152)
T d1xa0a1          79 RFREGDEVIATGY------------------------EIGVTHFG-------------------GYSEYARLHGEWLVPL  115 (152)
T ss_dssp             SCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSEEEECGGGCEEC
T ss_pred             ccccCCEEEEecC------------------------ccccccCC-------------------CcceeeeehhhccccC
Confidence            8999999986532                        13333445                   9999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEEC
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG  210 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G  210 (373)
                      |++++ .+|++++++.+|+|.++.....++ |++|||+|
T Consensus       116 P~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         116 PKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            99998 468888889899988888888886 99999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.9e-27  Score=202.89  Aligned_cols=166  Identities=20%  Similarity=0.267  Sum_probs=149.5

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ||+++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5899999999999999999888889999999999997 9999999999999999 8999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +++   .++.+.+++.+++ ++|+|||++|+. .++.++++++++ |+++.+|.. +  ..+++...++. +++++|+.+
T Consensus        80 ~~~---~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~-~--~~~~~~~~~~~k~~~i~g~~~  151 (174)
T d1yb5a2          80 HRE---VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSR-G--TIEINPRDTMAKESSIIGVTL  151 (174)
T ss_dssp             TTS---TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCC-S--CEEECTHHHHTTTCEEEECCG
T ss_pred             ccc---ccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCC-CEEEEEecC-C--CCCCCHHHHHHCCCEEEEEEe
Confidence            988   8999999999988 899999999965 599999999997 999999963 2  45777777777 999999976


Q ss_pred             CCCCchhHHHHHHHHHHcC
Q 017335          332 GGLKPRSDIATLAQKYLDK  350 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g  350 (373)
                      +... .++++++++++++|
T Consensus       152 ~~~~-~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         152 FSST-KEEFQQYAAALQAG  169 (174)
T ss_dssp             GGCC-HHHHHHHHHHHHHH
T ss_pred             cCCC-HHHHHHHHHHHHHH
Confidence            6544 67889999888775

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=8.7e-27  Score=200.01  Aligned_cols=174  Identities=44%  Similarity=0.741  Sum_probs=149.7

Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++||.+.|++.|+|+++.+.++++||++|||+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++|++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            57889999999999999988889999999999999999999999999999988999999999999999999999999986


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCC-ccccCHHHHhhCcEEEEeecCCC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEILKGRSVCGTYFGGL  334 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~  334 (373)
                      + .+.+..+.+++.+++++|+|||++|...+++.+..+++++ |+++.++...... ....+...++++++++|+.+++.
T Consensus        82 ~-~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2fzwa2          82 D-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGW  159 (176)
T ss_dssp             G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             c-hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCC
Confidence            5 2244556666666669999999999999889999999997 8888776544433 33344555556999999999998


Q ss_pred             CchhHHHHHHHHHHcCC
Q 017335          335 KPRSDIATLAQKYLDKV  351 (373)
Q Consensus       335 ~~~~~~~~~~~~~~~g~  351 (373)
                      ..++++.++++++++||
T Consensus       160 ~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         160 KSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            88899999999999997

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=199.22  Aligned_cols=172  Identities=38%  Similarity=0.658  Sum_probs=151.9

Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      +++.||.+.|.+.|+|+++.+..++++|++|+|+|+|++|++++|+++.+|+.+||+++.+++|++.++++||++++|++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            58999999999999999988999999999999999999999999999999987999999999999999999999999987


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL  334 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (373)
                      +  ..+..+.+.+.+.+ ++|++||++|....+..++..+.+++|+++.+|.......+.+++..++++++++|+.+|+.
T Consensus        83 ~--~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  160 (176)
T d1d1ta2          83 D--STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGL  160 (176)
T ss_dssp             G--CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             c--cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCC
Confidence            6  12234556666655 99999999999988888888776534999999997777778888877778999999999999


Q ss_pred             CchhHHHHHHHHHHc
Q 017335          335 KPRSDIATLAQKYLD  349 (373)
Q Consensus       335 ~~~~~~~~~~~~~~~  349 (373)
                      +.++|++++++++.+
T Consensus       161 ~~~~dip~li~~~~~  175 (176)
T d1d1ta2         161 KSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CHHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHHHhC
Confidence            889999999998765

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=6.2e-27  Score=200.74  Aligned_cols=170  Identities=27%  Similarity=0.423  Sum_probs=149.1

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +|+++|+.++++++|||+++ +.+++++|++|+|+|+|++|++++|+||.+|+++|++++++++|++.++++|+++++|+
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999974 77899999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH---HhhCcEEEEee
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE---ILKGRSVCGTY  330 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~---~~~~~~i~g~~  330 (373)
                      ++   +++.+.+++++++ ++|+||||+|++.+++.++++++++ |+++.+|.+.....++++...   +++++++.|+.
T Consensus        80 ~~---~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          80 KN---GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GG---SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             cc---hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            88   8899999999988 8999999999988899999999997 999999987665555544332   23478999987


Q ss_pred             cCCCCchhHHHHHHHHHHcCC
Q 017335          331 FGGLKPRSDIATLAQKYLDKV  351 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~  351 (373)
                      .+..  +...++++++++.||
T Consensus       156 ~~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCH--HHHHHHHHHHHHTTS
T ss_pred             CCCC--cccHHHHHHHHHcCC
Confidence            6552  456788889999886

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.4e-26  Score=193.11  Aligned_cols=141  Identities=19%  Similarity=0.208  Sum_probs=120.8

Q ss_pred             eeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335           17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   94 (373)
Q Consensus        17 ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   94 (373)
                      +.++|++.|.+  |++++++.|.|++|||+|||.+++||++|++.+.|.++..  .+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~   79 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLPSGLGTEAAGIVSKVGSGVKHIK   79 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCC--cceeeeccccccceeeeeeeccccc
Confidence            45788888876  8999999999999999999999999999999999988766  7999999999999999999999999


Q ss_pred             CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335           95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  174 (373)
Q Consensus        95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~  174 (373)
                      +||||+...                             ...                   |+|+||+.++.+.++++|++
T Consensus        80 vGdrV~~~~-----------------------------~~~-------------------G~~ae~~~v~~~~~~~~P~~  111 (147)
T d1qora1          80 AGDRVVYAQ-----------------------------SAL-------------------GAYSSVHNIIADKAAILPAA  111 (147)
T ss_dssp             TTCEEEESC-----------------------------CSS-------------------CCSBSEEEEEGGGEEECCTT
T ss_pred             ccceeeeec-----------------------------ccc-------------------ccceeEEEEehHHeEEcCcc
Confidence            999996321                             112                   38999999999999999999


Q ss_pred             CChhhhh--ccchhhhhHHHHHHHHhCCCCCCEEEE
Q 017335          175 IPLGIAC--LLSCGVSTGVGAAWKVAGVEVGSTVAI  208 (373)
Q Consensus       175 l~~~~aa--~l~~~~~ta~~~~~~~~~~~~~~~VlI  208 (373)
                      +++++++  +++....++++++++ .++++|++|||
T Consensus       112 ~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         112 IKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             SCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            9887554  455566677765554 67999999998

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=3.3e-26  Score=197.64  Aligned_cols=171  Identities=21%  Similarity=0.301  Sum_probs=149.1

Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      +++.+|.+.|+.+|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++|+++++|++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            35678888999999999888888999999999999999999999999999987899999999999999999999999998


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH-Hhh-CcEEEEeecC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILK-GRSVCGTYFG  332 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~-~~~i~g~~~~  332 (373)
                      +....++.+.+.+.+++ ++|+||||+|++.+++.++++++++ |+++.+|......+++++... ++. +++++|+..+
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            73333455667888887 8999999999988799999999997 999999987666677887654 344 9999999766


Q ss_pred             CCCchhHHHHHHHHHHcC
Q 017335          333 GLKPRSDIATLAQKYLDK  350 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g  350 (373)
                      +   .+++++++++++++
T Consensus       161 ~---~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 D---TSHFVKTVSITSRN  175 (182)
T ss_dssp             C---HHHHHHHHHHHHTC
T ss_pred             C---HHHHHHHHHHHHHC
Confidence            5   68899999999875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=4.5e-26  Score=194.54  Aligned_cols=167  Identities=21%  Similarity=0.257  Sum_probs=152.7

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      |++.+||.++|++.|||+++ ++.+++++++|+|+|+ |++|++++++++.+|+.+|++++++++|+++++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999975 7789999999999996 999999999999999779999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +++   .++.+.+.+.+.+ ++|++|||+|++.+++.++++++++ |+++.+|....  ..+++...++. +++++|+..
T Consensus        80 ~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~i~i~Gs~~  153 (170)
T d1jvba2          80 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGA--DLHYHAPLITLSEIQFVGSLV  153 (170)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCC--CCCCCHHHHHHHTCEEEECCS
T ss_pred             cCC---cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccC--ccccCHHHHHhCCcEEEEEec
Confidence            988   8899999999887 8999999999999899999999997 99999998543  46788888777 999999977


Q ss_pred             CCCCchhHHHHHHHHHHcCC
Q 017335          332 GGLKPRSDIATLAQKYLDKV  351 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~  351 (373)
                      ++   +++++++++++++||
T Consensus       154 ~~---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         154 GN---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             CC---HHHHHHHHHHHHTTS
T ss_pred             CC---HHHHHHHHHHHHcCC
Confidence            65   789999999999997

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=1.4e-25  Score=192.50  Aligned_cols=174  Identities=40%  Similarity=0.689  Sum_probs=146.1

Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++++++.+|..+|++++++++|.+.++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            57889999999999999999999999999999999999999999999999988999999999999999999999999876


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC-CCCccccCHHHHhhCcEEEEeecCCC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM-HGSPISLNSIEILKGRSVCGTYFGGL  334 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (373)
                      + .+....+.+....++++|++||++|.+.+++.++..++++ |..+.++... ...........++++++++|+..++.
T Consensus        82 ~-~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2jhfa2          82 D-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA-YGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGF  159 (176)
T ss_dssp             G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             C-chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcC-CcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCC
Confidence            5 1233444444444559999999999999899999999996 5555555433 33344555555566999999999988


Q ss_pred             CchhHHHHHHHHHHcCC
Q 017335          335 KPRSDIATLAQKYLDKV  351 (373)
Q Consensus       335 ~~~~~~~~~~~~~~~g~  351 (373)
                      ..+++++++++++++||
T Consensus       160 ~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         160 KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHCcC
Confidence            88899999999999987

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=3.3e-27  Score=192.61  Aligned_cols=131  Identities=18%  Similarity=0.186  Sum_probs=117.1

Q ss_pred             eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335           16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   95 (373)
Q Consensus        16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   95 (373)
                      |||++++++|+++++++++.|.|+++||+||+.++|||++|++.+.|.+.... .+|+++|||++|+|           +
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~-~~P~v~G~E~~G~V-----------v   68 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRL-HPPFIPGMEVVGVV-----------E   68 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCCEEEEEE-----------T
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccc-cceeEeeeeeEEee-----------c
Confidence            89999999998899999999999999999999999999999999999875543 79999999999999           3


Q ss_pred             CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335           96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  175 (373)
Q Consensus        96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l  175 (373)
                      ||||....                              .+|                   +|+||+.++++.++++|+++
T Consensus        69 Gd~V~~~~------------------------------~~G-------------------~~aey~~v~~~~~~~~P~~~   99 (131)
T d1iz0a1          69 GRRYAALV------------------------------PQG-------------------GLAERVAVPKGALLPLPEGR   99 (131)
T ss_dssp             TEEEEEEC------------------------------SSC-------------------CSBSEEEEEGGGCEECCTTC
T ss_pred             cceEEEEe------------------------------ccC-------------------ccceeeeeCHHHeEEccCCC
Confidence            99997542                              223                   99999999999999999999


Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  209 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~  209 (373)
                      ++++||.+++.+.|||+++.+++  +.|++||++
T Consensus       100 ~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         100 PVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             CCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            99999999999999999886655  569999874

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=1.6e-25  Score=191.52  Aligned_cols=165  Identities=19%  Similarity=0.309  Sum_probs=146.8

Q ss_pred             ChhhhhccchhhhhHHHHHHHHh-CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~-~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      .+.++|.++|+++|||+++.+.. .++||++|||+|+|++|++++|+++.+|+.+|++++++++|++.++++|+++++++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            36788999999999999887766 48999999999999999999999999998799999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      ++    +..+.+.+.+.+ ++|+||||+|+..+++.++++++++ |+++.+|.. +  ..+++...++. +++|+|+..+
T Consensus        85 ~~----~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~-~--~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          85 RR----DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYG-G--ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             TS----CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCS-S--CCCCCHHHHHHTTCEEEECCSC
T ss_pred             cc----cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCc-c--cccCCHHHHHhCCcEEEEEEec
Confidence            86    455666677777 8999999999998899999999997 999999963 2  46788888887 9999999876


Q ss_pred             CCCchhHHHHHHHHHHcCC
Q 017335          333 GLKPRSDIATLAQKYLDKV  351 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~  351 (373)
                      +   +++++++++++++||
T Consensus       157 ~---~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N---YVELHELVTLALQGK  172 (172)
T ss_dssp             C---HHHHHHHHHHHHTTS
T ss_pred             C---HHHHHHHHHHHHcCC
Confidence            6   688999999999997

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-25  Score=190.08  Aligned_cols=167  Identities=16%  Similarity=0.288  Sum_probs=143.7

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +|+++||++. ++++||++ .++.++++|++|+|+|+|++|++++|+++.+|+++|++++++++|+++++++|++++++.
T Consensus         1 vS~e~Aal~e-pla~a~~a-~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHA-CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHH-HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHH-HHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4789998776 89999996 577899999999999999999999999999999889999999999999999999999998


Q ss_pred             CCCCCccHHHHHH---HhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335          255 ATCGDKTVSQVIK---EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  330 (373)
Q Consensus       255 ~~~~~~~~~~~i~---~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~  330 (373)
                      ++   .+..+..+   ...+.++|+||||+|++.+++.++++++++ |+++++|....  ..+++...++. +++++|++
T Consensus        79 ~~---~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~--~~~~~~~~~~~k~l~i~Gs~  152 (171)
T d1pl8a2          79 SK---ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSE--MTTVPLLHAAIREVDIKGVF  152 (171)
T ss_dssp             SS---CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCS--CCCCCHHHHHHTTCEEEECC
T ss_pred             cc---cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCC--CCccCHHHHHHCCcEEEEEe
Confidence            87   44443333   333348999999999999899999999997 99999998543  45788888877 99999985


Q ss_pred             cCCCCchhHHHHHHHHHHcCCCC
Q 017335          331 FGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      ..    .++++++++++++|+|+
T Consensus       153 ~~----~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         153 RY----CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             SC----SSCHHHHHHHHHTTSCC
T ss_pred             CC----HhHHHHHHHHHHcCCCC
Confidence            32    36799999999999985

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=1.9e-25  Score=191.45  Aligned_cols=173  Identities=42%  Similarity=0.698  Sum_probs=145.3

Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      ++++||++.|++.|+|+++.+.+++++|++|+|+|+|++|+.++++++..|..+|++++++++|++.++++||++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            57899999999999999998999999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC
Q 017335          256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL  334 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  334 (373)
                      +  +.+..+.+.+.+.+ ++|++||++|...+++.++.+++++ |.++.++..............++++++++|+..++.
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g-~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 D--HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG-WGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             C--cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCC-CcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            6  13345555555555 9999999999998889999998886 555544443444433444444455999999999988


Q ss_pred             CchhHHHHHHHHHHcCC
Q 017335          335 KPRSDIATLAQKYLDKV  351 (373)
Q Consensus       335 ~~~~~~~~~~~~~~~g~  351 (373)
                      ..+++++++++++++||
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            88899999999999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=2.8e-26  Score=198.03  Aligned_cols=173  Identities=20%  Similarity=0.179  Sum_probs=148.8

Q ss_pred             hhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCC
Q 017335          178 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  256 (373)
Q Consensus       178 ~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~  256 (373)
                      +|||+++++++|||+++++..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5799999999999999999999999999999987 9999999999999999 9999999999999999999999999988


Q ss_pred             CCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCC
Q 017335          257 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK  335 (373)
Q Consensus       257 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  335 (373)
                         +++.+.+++.+++ ++|++|||+|++. ++.++++++++ |+++.+|........++....+.++.++.+.......
T Consensus        80 ---~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          80 ---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             ---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             ---cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence               8999999999988 9999999999865 99999999997 9999999754433334455555558888887533211


Q ss_pred             ------chhHHHHHHHHHHcCCCCCCc
Q 017335          336 ------PRSDIATLAQKYLDKVHLRSS  356 (373)
Q Consensus       336 ------~~~~~~~~~~~~~~g~i~~~~  356 (373)
                            .++.++++++++++|+|++-+
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                  146688999999999998743

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=5.9e-25  Score=186.79  Aligned_cols=164  Identities=20%  Similarity=0.305  Sum_probs=145.9

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++||.++|+++|||+++ ++.++++|++|+|+|+|++|++++|++|.+|+ +|++++++++|++.++++|+++++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999975 67899999999999999999999999999998 99999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      ++   .++.+.+.+.+. ++|.++++.++...++.++++++++ |+++.+|...  ...+++...++. +++++|+..++
T Consensus        79 ~~---~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~Gs~~~~  151 (166)
T d1llua2          79 RQ---EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPP--GDFPTPIFDVVLKGLHIAGSIVGT  151 (166)
T ss_dssp             TT---SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecC--CCccCCHHHHHhCCcEEEEEeecC
Confidence            88   788888887665 5666777777778899999999997 9999999743  356788888887 99999997665


Q ss_pred             CCchhHHHHHHHHHHcC
Q 017335          334 LKPRSDIATLAQKYLDK  350 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g  350 (373)
                         +++++++++++++|
T Consensus       152 ---~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 ---RADLQEALDFAGEG  165 (166)
T ss_dssp             ---HHHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHHCc
Confidence               78899999999987

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.9e-25  Score=191.13  Aligned_cols=171  Identities=12%  Similarity=0.092  Sum_probs=139.0

Q ss_pred             CChhhhhccchhhhhHHHHH---HHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          175 IPLGIACLLSCGVSTGVGAA---WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~---~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      ||+++||+++++++|||.++   .+....++|++|||+|+ |++|.+++|+||.+|+ +|+++.++++|.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            68999999999999999654   45677899999999997 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      ++|+++    .+.+.++...++++|+|||++|+.. ++.++++|+++ |+++.+|.. .+...+++...++. +++++|.
T Consensus        80 vi~~~~----~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~-Griv~~G~~-~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED----VMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLT-GGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCC-SSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch----hHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCC-ceEEEeecc-cCcccCCCHHHHHHCCcEEEEE
Confidence            999865    3444444444449999999999887 99999999997 999999984 55667888888887 9999997


Q ss_pred             ecCCCCchhHHHHHHHHHHcCCCCCC
Q 017335          330 YFGGLKPRSDIATLAQKYLDKVHLRS  355 (373)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~g~i~~~  355 (373)
                      ..... +.+...++.+.+ .|+|+|+
T Consensus       153 ~~~~~-~~~~~~~~~~~l-ag~lkP~  176 (176)
T d1xa0a2         153 DSVYC-PMDLRLRIWERL-AGDLKPD  176 (176)
T ss_dssp             CSSSC-CHHHHHHHHHHH-HTTTCCC
T ss_pred             eCCcC-CHHHHHHHHHHH-hcccCCC
Confidence            54332 357777777766 4777763

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=1.9e-24  Score=183.78  Aligned_cols=167  Identities=25%  Similarity=0.394  Sum_probs=147.8

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      ||+++||+++++++|||+++ +..++++|++|||+|+|++|++++++++..|+ +|++++++++|+++++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            68999999999999999965 67899999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335          255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  333 (373)
Q Consensus       255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~  333 (373)
                      .+   .++.+.+++.+.+. |.++++.++...++.++++++++ |+++.+|...  ...+++...++. +++++|+..+.
T Consensus        79 ~~---~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~~  151 (168)
T d1rjwa2          79 LK---EDAAKFMKEKVGGV-HAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPP--EEMPIPIFDTVLNGIKIIGSIVGT  151 (168)
T ss_dssp             TT---SCHHHHHHHHHSSE-EEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---chhhhhcccccCCC-ceEEeecCCHHHHHHHHHHhccC-CceEeccccc--CCCCCCHHHHHHCCcEEEEEeeCC
Confidence            88   88888898888754 44455666677799999999997 9999999753  356778888777 99999997654


Q ss_pred             CCchhHHHHHHHHHHcCCCC
Q 017335          334 LKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       334 ~~~~~~~~~~~~~~~~g~i~  353 (373)
                         +++++++++++++|+|+
T Consensus       152 ---~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 ---RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ---HHHHHHHHHHHHTTSCC
T ss_pred             ---HHHHHHHHHHHHhCCCC
Confidence               78999999999999985

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=2.9e-24  Score=183.09  Aligned_cols=167  Identities=19%  Similarity=0.320  Sum_probs=140.5

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~  254 (373)
                      +|+++||++. ++++||++ +++.++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|++.++++|++++++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a-~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHA-CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHH-HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHH-HHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4789998876 89999996 477899999999999999999999999999999 99999999999999999999887655


Q ss_pred             CCC--CCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          255 ATC--GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       255 ~~~--~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +..  ...++.+.+.+..++++|+||||+|++.+++.++++++++ |+++.+|....  ..+++...++. +++++|+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~--~~~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQ--MVTVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSS--CCCCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCC--CCCcCHHHHHHCCCEEEEEEC
Confidence            431  1123445555555559999999999998899999999997 99999997543  46788888887 999999853


Q ss_pred             CCCCchhHHHHHHHHHHcCC
Q 017335          332 GGLKPRSDIATLAQKYLDKV  351 (373)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~g~  351 (373)
                      .    .++++++++++++||
T Consensus       155 ~----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 Y----CNDYPIALEMVASGR  170 (170)
T ss_dssp             C----SSCHHHHHHHHHTTS
T ss_pred             C----HHHHHHHHHHHHcCC
Confidence            2    357999999999986

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=4.4e-25  Score=189.80  Aligned_cols=170  Identities=19%  Similarity=0.179  Sum_probs=140.6

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      +|+++||+++++.+|||+++.+..++++|++|||+|+ |++|++++|+||..|+ +|++++++++|.++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5899999999999999999888889999999999987 7899999999999999 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh--CcEEEEee
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGTY  330 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~--~~~i~g~~  330 (373)
                      +++   +++.++++++|++ ++|+|+|++|++. ++.++++++++ |+++.+|... ....+++...+..  .+.+.+..
T Consensus        80 ~~~---~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  153 (179)
T d1qora2          80 YRE---EDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGNSS-GAVTGVNLGILNQKGSLYVTRPS  153 (179)
T ss_dssp             TTT---SCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCCTT-CCCCCBCTHHHHHTTSCEEECCC
T ss_pred             CCC---CCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcC-Ceeeeccccc-CCccccchhhhhccceEEEEeeE
Confidence            998   8999999999988 8999999999776 99999999997 9999998744 3444555555444  33333322


Q ss_pred             cCC-CCch----hHHHHHHHHHHcCC
Q 017335          331 FGG-LKPR----SDIATLAQKYLDKV  351 (373)
Q Consensus       331 ~~~-~~~~----~~~~~~~~~~~~g~  351 (373)
                      +.. ...+    +.+.++++++++|.
T Consensus       154 l~~~~~~~~~~~~~~~~l~~lv~~Gv  179 (179)
T d1qora2         154 LQGYITTREELTEASNELFSLIASGV  179 (179)
T ss_dssp             HHHHCCSHHHHHHHHHHHHHHHHTTS
T ss_pred             EeeecCCHHHHHHHHHHHHHHHHCcC
Confidence            211 1122    34566788888873

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=4.2e-25  Score=183.48  Aligned_cols=138  Identities=12%  Similarity=0.051  Sum_probs=115.8

Q ss_pred             eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335           16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV   93 (373)
Q Consensus        16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   93 (373)
                      |||+++++++.+  +++++++.|+|++|||||||.|+|||++|.....|.++... .+|+++|+|++|+|+++|..  .+
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~-~~p~v~G~e~~G~V~~~~~~--~~   77 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIR-NFPMIPGIDFAGTVRTSEDP--RF   77 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCC-SSSBCCCSEEEEEEEEECST--TC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeeccccc-ccceeccccccccceeeccC--Cc
Confidence            899999998776  78899999999999999999999999999999998865543 78999999999999998764  69


Q ss_pred             CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335           94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  173 (373)
Q Consensus        94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  173 (373)
                      ++||+|.+...                        ..|...+|                   +|+||+.+|+++++++|+
T Consensus        78 ~~g~~v~~~~~------------------------~~g~~~~G-------------------~~Aey~~v~~~~vv~lP~  114 (146)
T d1o89a1          78 HAGQEVLLTGW------------------------GVGENHWG-------------------GLAEQARVKGDWLVAMPQ  114 (146)
T ss_dssp             CTTCEEEEECT------------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCT
T ss_pred             cceeeEEeecc------------------------cceecCCC-------------------cceeeeeeeeeeEEECCC
Confidence            99999986542                        24455556                   999999999999999999


Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCC
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEV  202 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~  202 (373)
                      ++|+++||+++++..||+.   ....++.
T Consensus       115 ~ls~~eAA~l~~a~~tA~~---~~~~~~~  140 (146)
T d1o89a1         115 GQAAKEISLSEAPNFAEAI---INNQIQG  140 (146)
T ss_dssp             TSCCEEECGGGHHHHHHHH---HTTCCCS
T ss_pred             CCCHHHHHHHHHHHHHHHH---HHHhhcC
Confidence            9999999999988888754   3445553

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.92  E-value=2.4e-24  Score=185.77  Aligned_cols=164  Identities=22%  Similarity=0.216  Sum_probs=140.7

Q ss_pred             hccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       181 a~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      +++.++.+|||+++.+..++++|++|||+|+ |++|++++|+||..|+ +||++++++++.++++++|+++++++++   
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~---   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT---   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc---
Confidence            4677889999999999999999999999998 8999999999999999 9999999999999999999999999988   


Q ss_pred             ccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC-----CCccccCHHHHhh-CcEEEEeecC
Q 017335          260 KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH-----GSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       260 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~-----~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      +++.+.+.+.+.+ ++|+|||++|++. ++.++++++++ |+++.+|....     ..+..++...++. ++++.|+...
T Consensus        84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          84 VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             ccHHHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            7877777777666 9999999999655 99999999997 99999996321     2234566677776 9999999877


Q ss_pred             CCCc---hhHHHHHHHHHHcC
Q 017335          333 GLKP---RSDIATLAQKYLDK  350 (373)
Q Consensus       333 ~~~~---~~~~~~~~~~~~~g  350 (373)
                      .+..   .+.++++++|+++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence            7653   35578889999886

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.4e-24  Score=183.38  Aligned_cols=165  Identities=15%  Similarity=0.226  Sum_probs=137.5

Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      ..+++.+|.+.|+..|+|+++ ++.++++|++|+|+|+|++|++++|+||.+|+ ++++++++++++++++++|+++++|
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence            345778888999999999975 77999999999999999999999999999999 7888999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      +.+   .+...    ...+++|++||++|.+.+++.++++++++ |+++.+|.. .+....++...++. ++++.|+..+
T Consensus        81 ~~~---~~~~~----~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~-~~~~~~~~~~~l~~k~~~i~Gs~~~  151 (168)
T d1uufa2          81 SRN---ADEMA----AHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAP-ATPHKSPEVFNLIMKRRAIAGSMIG  151 (168)
T ss_dssp             TTC---HHHHH----TTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSC
T ss_pred             Cch---hhHHH----HhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccC-CCCcccccHHHHHHCCcEEEEEeec
Confidence            887   43221    11238999999999887799999999997 999999974 33445667777766 9999999876


Q ss_pred             CCCchhHHHHHHHHHHcCCC
Q 017335          333 GLKPRSDIATLAQKYLDKVH  352 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i  352 (373)
                      +   +.+++++++++.+++|
T Consensus       152 ~---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         152 G---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHHTC
T ss_pred             C---HHHHHHHHHHHHHcCC
Confidence            6   7899999999999875

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=1.1e-26  Score=196.97  Aligned_cols=153  Identities=18%  Similarity=0.157  Sum_probs=128.4

Q ss_pred             cceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335           14 IRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE   91 (373)
Q Consensus        14 ~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   91 (373)
                      .+|||++++.++..  +++++++.|++++|||||||+|+|||++|++.+.|.++..+ ..|.++|+|++|+|++.  .++
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~--~~~   78 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR-EYPLILGIDAAGTVVSS--NDP   78 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCS-SCSEECCSEEEEEEEEC--SST
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccc-cceeeeeeecccccccc--ccc
Confidence            47999999987654  99999999999999999999999999999999998876554 77899999999999994  456


Q ss_pred             ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335           92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  171 (373)
Q Consensus        92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l  171 (373)
                      ++++||+|.....                        ..|...+|                   +|+||+.+|++.++++
T Consensus        79 ~~~~g~~v~~~~~------------------------~~g~~~~G-------------------~~aey~~v~~~~l~~i  115 (162)
T d1tt7a1          79 RFAEGDEVIATSY------------------------ELGVSRDG-------------------GLSEYASVPGDWLVPL  115 (162)
T ss_dssp             TCCTTCEEEEEST------------------------TBTTTBCC-------------------SSBSSEEECGGGEEEC
T ss_pred             ccccceeeEeeec------------------------cceecccc-------------------ccceEEEecHHHEEEC
Confidence            8999999986543                        24555566                   9999999999999999


Q ss_pred             CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-Ch
Q 017335          172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GA  213 (373)
Q Consensus       172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~  213 (373)
                      |+++++++||++++..+|||.++. ......+++|||.|+ |+
T Consensus       116 P~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         116 PQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGR  157 (162)
T ss_dssp             CTTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCSSE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCcce
Confidence            999999999999999999987532 233445567787776 54

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1e-24  Score=185.82  Aligned_cols=164  Identities=19%  Similarity=0.170  Sum_probs=137.8

Q ss_pred             ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      +.+.||.+.|+..|+|+++ ++.++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4577889999999999975 67899999999999999999999999999999 899999999999999999999999886


Q ss_pred             CCCCccHHHHHHHhcCCCccEEEECCCCHH--HHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCFECIGLTS--VMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  332 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~  332 (373)
                      +  +.++.+    ...+++|+++||+++..  .++.++++++++ |+++.+|.....  .+++...++. +++|.|+..+
T Consensus        80 ~--~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          80 E--EGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQH--EMLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             G--TSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSS--CCEEECGGGCBSCEEEECCCC
T ss_pred             c--hHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEecccccc--ccccHHHHHhCCcEEEEEeeC
Confidence            5  133322    22348999999988643  467899999997 999999975443  3555555566 9999999877


Q ss_pred             CCCchhHHHHHHHHHHcCCCC
Q 017335          333 GLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       333 ~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      +   +++++++++++++|+|+
T Consensus       151 ~---~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 S---IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHTTCC
T ss_pred             C---HHHHHHHHHHHHhCCCC
Confidence            6   78999999999999985

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=3.4e-24  Score=183.03  Aligned_cols=159  Identities=19%  Similarity=0.269  Sum_probs=127.1

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  253 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~  253 (373)
                      +++++||+++++++|||+++ +..++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            58999999999999999976 5689999999999997 9999999999999999 9999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335          254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  331 (373)
Q Consensus       254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~  331 (373)
                      +++     ..   .+.+.+ ++|+|||++|. . ++.++++++++ |+++.+|.. ++...+++...++. +++++|+.+
T Consensus        79 ~~~-----~~---~~~~~~~g~D~v~d~~G~-~-~~~~~~~l~~~-G~~v~~G~~-~g~~~~~~~~~~~~k~~~i~g~~~  146 (171)
T d1iz0a2          79 YAE-----VP---ERAKAWGGLDLVLEVRGK-E-VEESLGLLAHG-GRLVYIGAA-EGEVAPIPPLRLMRRNLAVLGFWL  146 (171)
T ss_dssp             GGG-----HH---HHHHHTTSEEEEEECSCT-T-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCH
T ss_pred             hhh-----hh---hhhhccccccccccccch-h-HHHHHHHHhcC-CcEEEEeCC-CCCCCCccHHHHHHCCcEEEEEeC
Confidence            764     32   233444 89999999883 4 89999999997 999999974 44556777777776 999999976


Q ss_pred             CCCCc-hhHHHHHHHHH
Q 017335          332 GGLKP-RSDIATLAQKY  347 (373)
Q Consensus       332 ~~~~~-~~~~~~~~~~~  347 (373)
                      ..+.+ .+.+++++..+
T Consensus       147 ~~~~~~~~~~~~~~~~l  163 (171)
T d1iz0a2         147 TPLLREGALVEEALGFL  163 (171)
T ss_dssp             HHHTTCHHHHHHHHHHH
T ss_pred             cChhhhHHHHHHHHHHH
Confidence            55432 34445555544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=3.7e-24  Score=185.79  Aligned_cols=173  Identities=18%  Similarity=0.189  Sum_probs=141.2

Q ss_pred             CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE-CC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hHHHHHHHcCC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF-GL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKKFGI  248 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~-G~-G~vG~~a~~la~~~G~~~Vi~~~~~~----~~~~~~~~lga  248 (373)
                      +|+++||+++++++|||.++.+..++++|++|+|+ |+ |++|++++|+||.+|+ +||++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58999999999999999999888999999999997 55 8999999999999999 888876543    45667789999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhc---CCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335          249 TDFINPATCGDKTVSQVIKEMT---DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  324 (373)
Q Consensus       249 ~~vi~~~~~~~~~~~~~i~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~  324 (373)
                      ++++++++....++.+.+.+.+   ++++|+|||++|++. +..++++|+++ |+++.+|. .++.+.+++...++. ++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~-G~~v~~G~-~~~~~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-GLMLTYGG-MSFQPVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-CEEEECCC-CSSCCEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCC-cEEEEECC-ccCCCccCcHHHHHHCCc
Confidence            9999886422245555565553   348999999999776 89999999997 99999997 345567888888877 99


Q ss_pred             EEEEeecCCCC------chhHHHHHHHHHHcCC
Q 017335          325 SVCGTYFGGLK------PRSDIATLAQKYLDKV  351 (373)
Q Consensus       325 ~i~g~~~~~~~------~~~~~~~~~~~~~~g~  351 (373)
                      ++.|..++.+.      ..+.+.++++++++||
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99998654321      1366889999999986

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=6.6e-26  Score=194.30  Aligned_cols=159  Identities=16%  Similarity=0.104  Sum_probs=127.9

Q ss_pred             ccceeeEEeecCCCC-----eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCC--------CCCCccccCcc
Q 017335           13 VIRCKAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--------LPLPVIFGHEA   79 (373)
Q Consensus        13 ~~~~ka~~~~~~~~~-----l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~--------~~~p~~~G~e~   79 (373)
                      +.||||++++++|+|     ++..++|.|+|+++||||||.+++||++|++.++|.++...        ...|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            468999999998875     44556777888999999999999999999999887653321        25778999999


Q ss_pred             cEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceee
Q 017335           80 VGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTE  159 (373)
Q Consensus        80 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~  159 (373)
                      +|+|+++|..+..++.||+|.....                             ..                   |+|+|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~-----------------------------~~-------------------g~~ae  112 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------NF-------------------GTWRT  112 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS-----------------------------CC-------------------CCSBS
T ss_pred             ccccccccccccccccccceecccc-----------------------------cc-------------------ccccc
Confidence            9999999999999999999975332                             12                   38999


Q ss_pred             eEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHH-HhCCCCCCEEEEECC--ChHHHHHHHH
Q 017335          160 YSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFGL--GAVGLAVAEG  221 (373)
Q Consensus       160 ~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~~VlI~G~--G~vG~~a~~l  221 (373)
                      |+.+|+++++++|++++.+.++  .+..+|||+++.. ...+++|++|||.|+  |++|++++|+
T Consensus       113 y~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         113 HALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             eeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            9999999999999987644443  4466788876543 357999999999974  6799887663

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=5e-22  Score=172.89  Aligned_cols=166  Identities=27%  Similarity=0.271  Sum_probs=142.5

Q ss_pred             hhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCC
Q 017335          178 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC  257 (373)
Q Consensus       178 ~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~  257 (373)
                      ++.+++...++|||+++ +.+++++|++|||+|+|++|++++++++.+|+.+|++++.+++|++.++++|+++++++.+ 
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~-   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD-   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence            56778888999999975 6799999999999999999999999999999989999999999999999999999999988 


Q ss_pred             CCccHHHHHHHhcCC-CccEEEECCCC---------------HHHHHHHHHHhccCCceEEEEcccCCCCc---------
Q 017335          258 GDKTVSQVIKEMTDG-GADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGVEMHGSP---------  312 (373)
Q Consensus       258 ~~~~~~~~i~~~~~~-~~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~G~~~~~~~---------  312 (373)
                        +++.+.+.+++++ ++|++||++|.               ..+++.++++++++ |+++.+|.+....+         
T Consensus        80 --~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 --TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             --SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHT
T ss_pred             --cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhc
Confidence              8999999999988 99999999984               35699999999997 99999998654322         


Q ss_pred             --cccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCC
Q 017335          313 --ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKV  351 (373)
Q Consensus       313 --~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~  351 (373)
                        +++++..++. ++++.+   +..+.+..++++++++.++|
T Consensus       157 ~~~~~~~~~~~~k~~~i~~---g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHT---GQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEE---SSCCHHHHHHHHHHHHHTTS
T ss_pred             CceeeeHHHHHhhcceecc---CCCchHHHHHHHHHHHHcCC
Confidence              2455555555 888764   34444677899999999876

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=8e-23  Score=176.92  Aligned_cols=172  Identities=19%  Similarity=0.218  Sum_probs=134.6

Q ss_pred             CCChhhhhccchhhhhHHHHHHHHhCCCCC--CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCc
Q 017335          174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGIT  249 (373)
Q Consensus       174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~--~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~  249 (373)
                      ++|+.+.+ ++++.+|||.++.+..++++|  ++|||+|+ |++|++++|+||.+|+++|+++++++++... .+++|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            46677765 566899999999999999987  88999997 9999999999999999778877777666555 4579999


Q ss_pred             eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---C--ccccC---HHHHh
Q 017335          250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---S--PISLN---SIEIL  321 (373)
Q Consensus       250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---~--~~~~~---~~~~~  321 (373)
                      +++|+++   +++.+.+++.++.++|+|||++|++. ++.++++++++ |+++.+|.....   .  ..+..   ...+.
T Consensus        80 ~vi~~~~---~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~  154 (187)
T d1vj1a2          80 AAVNYKT---GNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRK  154 (187)
T ss_dssp             EEEETTS---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHH
T ss_pred             EEeeccc---hhHHHHHHHHhccCceEEEecCCchh-HHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHH
Confidence            9999998   89999999998779999999999766 99999999997 999999963221   0  11111   22233


Q ss_pred             h-CcEEEEeecCCCCc--hhHHHHHHHHHHcCC
Q 017335          322 K-GRSVCGTYFGGLKP--RSDIATLAQKYLDKV  351 (373)
Q Consensus       322 ~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~  351 (373)
                      . ++++.|..+.++..  .+.++++.+++++||
T Consensus       155 ~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         155 ERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             hcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            3 88999987666542  356788999999986

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.9e-21  Score=166.35  Aligned_cols=151  Identities=13%  Similarity=0.103  Sum_probs=124.6

Q ss_pred             CChhhhhccchhhhhHHHHHHH--HhC-CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335          175 IPLGIACLLSCGVSTGVGAAWK--VAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  250 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~--~~~-~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~  250 (373)
                      +|+.+|+.++++..|||.+++.  ..+ ..++++|||+|+ |++|++++|+||.+|+ +||++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            5789999999999999987542  233 445669999988 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335          251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  329 (373)
Q Consensus       251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~  329 (373)
                      ++|+++   .++.+   .+.+..+|.++|++|++. +..++++++++ |+++.+|.. ++...+++...++. ++++.|+
T Consensus        80 vi~~~~---~~~~~---~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~-Griv~~G~~-~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE---FAESR---PLEKQVWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLA-GGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG---SSSCC---SSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCT-TCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc---HHHHH---HHHhhcCCeeEEEcchHH-HHHHHHHhccc-cceEeeccc-CCccccccHHHHHHCCCeEEEE
Confidence            999876   44322   233336899999999876 99999999997 999999984 44566777777776 9999998


Q ss_pred             ecCCCC
Q 017335          330 YFGGLK  335 (373)
Q Consensus       330 ~~~~~~  335 (373)
                      ......
T Consensus       151 ~~~~~~  156 (177)
T d1o89a2         151 DSVMTP  156 (177)
T ss_dssp             CSSSCC
T ss_pred             ecccCC
Confidence            655444

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.83  E-value=2.5e-21  Score=164.07  Aligned_cols=157  Identities=13%  Similarity=0.066  Sum_probs=122.1

Q ss_pred             hhhhHHHH---HHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCcc
Q 017335          186 GVSTGVGA---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  261 (373)
Q Consensus       186 ~~~ta~~~---~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~  261 (373)
                      +..|||.+   +.+....+++++|||+|+ |++|++++|+||.+|+ +||++.++++|.++++++|+++++++++     
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~-----   77 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED-----   77 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH-----
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc-----
Confidence            45667654   445556777889999997 9999999999999999 9999999999999999999999998653     


Q ss_pred             HHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhH
Q 017335          262 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD  339 (373)
Q Consensus       262 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~  339 (373)
                      +..+....+.+ ++|+|||++|++. ++.++++|+++ |+++.+|.. .+...+++...++. +++++|......+ .+.
T Consensus        78 ~~~~~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~-G~iv~~G~~-~g~~~~~~~~~l~~k~~~i~G~~~~~~~-~~~  153 (167)
T d1tt7a2          78 VYDGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLT-GGGEVPATVYPFILRGVSLLGIDSVYCP-MDV  153 (167)
T ss_dssp             HCSSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCS-SCSCEEECSHHHHTSCCEEEECCSSSCC-HHH
T ss_pred             hhchhhhcccCCCceEEEecCcHHH-HHHHHHHhccC-ceEEEeecc-CCCcccCCHHHHHHCCcEEEEEecCCCC-HHH
Confidence            21122233334 8999999999887 99999999997 999999984 45677888888877 9999997544332 455


Q ss_pred             HHHHHHHHHcCCCC
Q 017335          340 IATLAQKYLDKVHL  353 (373)
Q Consensus       340 ~~~~~~~~~~g~i~  353 (373)
                      ..++.+.+. +.+.
T Consensus       154 ~~~~~~~l~-~~L~  166 (167)
T d1tt7a2         154 RAAVWERMS-SDLK  166 (167)
T ss_dssp             HHHHHHHTT-TTSC
T ss_pred             HHHHHHHHH-hcCC
Confidence            556655553 3443

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.55  E-value=6.7e-14  Score=114.88  Aligned_cols=133  Identities=18%  Similarity=0.147  Sum_probs=97.0

Q ss_pred             cceeeEEeecC--CCC----eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335           14 IRCKAAICRIP--GKP----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG   87 (373)
Q Consensus        14 ~~~ka~~~~~~--~~~----l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG   87 (373)
                      ++.|++++.+.  |.+    |++++.++|+|++||||||+.+.++++........   .   ....++..+++|+|++  
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~---~---~~g~~~~g~~vg~Vv~--   73 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR---L---KEGAVMMGQQVARVVE--   73 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG---S---CTTSBCCCCEEEEEEE--
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc---c---ccCCccccceEEEEEE--
Confidence            45788888864  333    89999999999999999999999998754332221   1   2233566789999998  


Q ss_pred             CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335           88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  167 (373)
Q Consensus        88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  167 (373)
                      +..++|++||+|...                                                    ++|+||.+++.+.
T Consensus        74 S~~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~  101 (147)
T d1v3va1          74 SKNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKG  101 (147)
T ss_dssp             ESCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSS
T ss_pred             eCCCcccCCCEEEEc----------------------------------------------------cCCEeEEEeccce
Confidence            556789999999742                                                    2799999999999


Q ss_pred             eEEcCCCCChh-----hhhccchhhhh-HHHHHHHHhCCCCCCEEEE
Q 017335          168 VVKITPHIPLG-----IACLLSCGVST-GVGAAWKVAGVEVGSTVAI  208 (373)
Q Consensus       168 ~~~lP~~l~~~-----~aa~l~~~~~t-a~~~~~~~~~~~~~~~VlI  208 (373)
                      +.++|+.++..     ..+++....+| ||..++  ...+.|++||+
T Consensus       102 l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~  146 (147)
T d1v3va1         102 LEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT  146 (147)
T ss_dssp             CEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred             eeEccccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence            99998765432     34445555666 554443  34577999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=1.5e-13  Score=99.44  Aligned_cols=73  Identities=14%  Similarity=0.100  Sum_probs=66.3

Q ss_pred             CChhhhhccchhhhhHHHHHHH---HhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          175 IPLGIACLLSCGVSTGVGAAWK---VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       175 l~~~~aa~l~~~~~ta~~~~~~---~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +|+++|+.++++..|||.+++.   ....+++++|||+|+ |++|.+++|++|.+|+ +|+++.+++++.++++++||
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            5789999999999999987654   345689999999988 9999999999999999 99999999999999999985

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.07  E-value=8e-06  Score=66.64  Aligned_cols=100  Identities=21%  Similarity=0.222  Sum_probs=75.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      +..+|+|+|+|..|+.++..|+.+|+ .|.++|.+.++++.+++...  .+.+...+   +.+.+.+.     .+|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~-----~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhc-----cCcEEEE
Confidence            46799999999999999999999999 99999999999999987542  22222222   33333332     6899998


Q ss_pred             CCCCHH------HHHHHHHHhccCCceEEEEcccCCCC
Q 017335          280 CIGLTS------VMNDAFNSSREGWGKTVILGVEMHGS  311 (373)
Q Consensus       280 ~~g~~~------~~~~~~~~l~~~~G~~v~~G~~~~~~  311 (373)
                      ++=-+.      .-...++.|++| +.++++...+++.
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqGG~  138 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGC  138 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCS
T ss_pred             eeecCCcccCeeecHHHHhhcCCC-cEEEEeecCCCCc
Confidence            754211      356788999997 9999999877664

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.04  E-value=3.7e-06  Score=69.65  Aligned_cols=107  Identities=17%  Similarity=0.212  Sum_probs=77.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC-CC---C---------CC----ccHHH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-AT---C---------GD----KTVSQ  264 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~-~~---~---------~~----~~~~~  264 (373)
                      +..+|+|+|+|.+|+.|+..|+.+|+ .|.++|.+.++++.++++++..+--. ..   .         ..    ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45789999999999999999999999 99999999999999999987543110 00   0         00    01112


Q ss_pred             HHHHhcCCCccEEEECCCCH------HHHHHHHHHhccCCceEEEEcccCCCC
Q 017335          265 VIKEMTDGGADYCFECIGLT------SVMNDAFNSSREGWGKTVILGVEMHGS  311 (373)
Q Consensus       265 ~i~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~~G~~v~~G~~~~~~  311 (373)
                      .+.+... ..|+||-+.=-+      ..-+...+.|++| +.++++...+++.
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqGGn  157 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGN  157 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCS
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCCCc
Confidence            2222222 699999875421      1356788999997 9999999877664

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.77  E-value=6.8e-05  Score=61.42  Aligned_cols=97  Identities=12%  Similarity=0.061  Sum_probs=68.5

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +++...+.++++|||+|+|+.+.+++..++..|+++|.++.|+.++.+.+.+ ++.. .++...              ..
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~-~~~~~~--------------~~   72 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YINSLE--------------NQ   72 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EESCCT--------------TC
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhh-hhhccc--------------cc
Confidence            5567777788999999999999999999999999899999999998877754 5543 332221              12


Q ss_pred             CccEEEECCCCHH-----H--HHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLTS-----V--MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~~-----~--~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+|+|++|+.-..     .  +..-...+++. ..++++-.
T Consensus        73 ~~DliINaTpiGm~~~~~~~~l~~~~~~~~~~-~~v~D~vY  112 (167)
T d1npya1          73 QADILVNVTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  112 (167)
T ss_dssp             CCSEEEECSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             chhhheeccccCCccccccccccccHhhcCCc-ceEEEEee
Confidence            6899999976311     0  01112345665 77777744

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.69  E-value=2.3e-05  Score=67.02  Aligned_cols=111  Identities=17%  Similarity=0.241  Sum_probs=77.8

Q ss_pred             ccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceEEcCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATC  257 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~vi~~~~~  257 (373)
                      .+..+...|.  ++...+++++++||.+|+|. |..++.+++..|. +|++++.+++-.+.+    +++|.+.+..... 
T Consensus        60 ~is~P~~~a~--ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-  134 (215)
T d1jg1a_          60 TVSAPHMVAI--MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG-  134 (215)
T ss_dssp             EECCHHHHHH--HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred             hhhhhhhHHH--HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence            3444555554  56788999999999999987 8888899998886 899999998755555    4567554322221 


Q ss_pred             CCccHHHHHHHhc-CCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          258 GDKTVSQVIKEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       258 ~~~~~~~~i~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                         +..   .... .+.||.|+-+.+.....+.+++.|++| |+++..
T Consensus       135 ---d~~---~g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         135 ---DGS---KGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             ---CGG---GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             ---ccc---cCCcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence               111   1112 237999997776655467889999997 998864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.60  E-value=6.8e-06  Score=70.48  Aligned_cols=100  Identities=22%  Similarity=0.337  Sum_probs=72.3

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceE--EcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDF--INPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~v--i~~~~~~~~~~~~~i  266 (373)
                      +++..++++|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++    .+.+.+  +..+.   .      
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~---~------  136 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG---Y------  136 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---G------
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCch---H------
Confidence            56788999999999999987 8888899998763 289999999988777754    343222  22111   0      


Q ss_pred             HHhc-CCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          267 KEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       267 ~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .... .+.||+|+.+.......+.+++.|++| |+++..
T Consensus       137 ~~~~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         137 YGVPEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             GCCGGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             HccccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            0111 237999998776555457788999997 998763

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.57  E-value=0.00063  Score=54.94  Aligned_cols=102  Identities=13%  Similarity=0.142  Sum_probs=70.1

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHH-HHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~-~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +.+..+--.+.+|||+|+|.+|.+.++.+...|++.+.++.|+.++.+ +++++|.. ++..     .++.+.+.     
T Consensus        15 a~~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~-----~~~~~~l~-----   83 (159)
T d1gpja2          15 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF-----DELVDHLA-----   83 (159)
T ss_dssp             HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHHH-----
T ss_pred             HHHHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc-----hhHHHHhc-----
Confidence            445555567889999999999999999999999988999999988765 45667753 4332     23443332     


Q ss_pred             CccEEEECCCCHH------HHHHHHHHhccCCc--eEEEEccc
Q 017335          273 GADYCFECIGLTS------VMNDAFNSSREGWG--KTVILGVE  307 (373)
Q Consensus       273 ~~d~vid~~g~~~------~~~~~~~~l~~~~G--~~v~~G~~  307 (373)
                      .+|+||.|++.+.      .+...++.-+.+ .  .+++++.+
T Consensus        84 ~~Divi~atss~~~ii~~~~i~~~~~~r~~~-~~~~iiDlavP  125 (159)
T d1gpja2          84 RSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILIIDIANP  125 (159)
T ss_dssp             TCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEEECCSS
T ss_pred             cCCEEEEecCCCCccccHhhhHHHHHhcccC-CCeEEEeecCC
Confidence            6999999998643      233333322222 2  57788764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.57  E-value=0.00025  Score=61.97  Aligned_cols=106  Identities=16%  Similarity=0.138  Sum_probs=71.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCc-cHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDK-TVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~-~~~~~i~~~~~--~~~d~  276 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.......-+..+. ++.+.+.+...  +.+|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            5789999998 8999999999999999 999999999887765 45665443322222223 23222232222  47999


Q ss_pred             EEECCCCHH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 017335          277 CFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       277 vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      ++++.|...                         ....+++.|+..+|+++.++...
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999988411                         24456666654339999998643

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.56  E-value=0.00026  Score=61.64  Aligned_cols=106  Identities=20%  Similarity=0.218  Sum_probs=72.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      -.|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+++.+...+ ..+-...+++.+.+.+...  +++|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFF-QVDLEDERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEE-ECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEE-EEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence            46899999998 8999999999999999 99999999999888888876433 2222112233333333322  379999


Q ss_pred             EECCCCHH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 017335          278 FECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM  308 (373)
Q Consensus       278 id~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~G~~~  308 (373)
                      +++.|...                         ....+++.|++ ++|+++.++...
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            99887411                         23445556643 238999887543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=0.00027  Score=61.61  Aligned_cols=104  Identities=15%  Similarity=0.178  Sum_probs=69.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--GGADYC  277 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v  277 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++ ++....+.-+-...+++.+.+.+...  +++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5899999998 8999999999999999 99999999998887765 33322222222111233333333322  379999


Q ss_pred             EECCCCHH--------------------------HHHHHHHHhccCCceEEEEcc
Q 017335          278 FECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       278 id~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +++.|...                          ....+++.|+.++|+++.++.
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS  138 (250)
T d1ydea1          84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS  138 (250)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccc
Confidence            99887310                          244455566553389998874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.50  E-value=6.8e-05  Score=65.52  Aligned_cols=100  Identities=10%  Similarity=0.085  Sum_probs=69.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cC-Cce--EEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FG-ITD--FINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lg-a~~--vi~~~~~~~~~~~~~  265 (373)
                      +....+++||++||=.|+|+ |.++..+|+..|. .+|++++.+++..+.+++    ++ ...  +.+.      ++   
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~------Di---  146 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS------DI---  146 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS------CT---
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe------ee---
Confidence            34567899999999999987 7788888887653 389999999998888764    22 222  2222      21   


Q ss_pred             HHHhcCC-CccEEE-ECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          266 IKEMTDG-GADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       266 i~~~~~~-~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                       .+...+ .||.|+ |.......+..+.+.|++| |+++.+.
T Consensus       147 -~~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         147 -ADFISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             -TTCCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             -ecccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence             122233 799998 4444445689999999997 9998873

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.45  E-value=0.00011  Score=63.22  Aligned_cols=105  Identities=16%  Similarity=0.171  Sum_probs=73.2

Q ss_pred             hhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-C---CceEEcCCCCCCcc
Q 017335          186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-G---ITDFINPATCGDKT  261 (373)
Q Consensus       186 ~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-g---a~~vi~~~~~~~~~  261 (373)
                      +...|.  ++....+++|++||-+|+|. |..++.+++.. . +|++++.+++..+.+++. .   ...++..+.  ...
T Consensus        56 p~~~a~--ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~--~~g  128 (224)
T d1vbfa_          56 LNLGIF--MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TLG  128 (224)
T ss_dssp             HHHHHH--HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GGC
T ss_pred             hhhHHH--HHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCch--hhc
Confidence            444443  56778999999999999986 77888888875 3 899999999988888653 1   122332221  000


Q ss_pred             HHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       262 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +      ...+.||.|+-+.+.+...+.+++.|++| |+++..
T Consensus       129 ~------~~~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         129 Y------EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             C------GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             c------hhhhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            1      11237999997666555567788999997 998874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.32  E-value=0.00029  Score=62.06  Aligned_cols=101  Identities=19%  Similarity=0.248  Sum_probs=73.2

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHH----cCC-ceE-EcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----FGI-TDF-INPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----lga-~~v-i~~~~~~~~~~~~~i  266 (373)
                      +....+++||++||=.|+|+ |.++..+|+..|.+ +|++++.+++..+.+++    +|. +.+ +...     ++    
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-----d~----  164 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-----DI----  164 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-----CG----
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-----cc----
Confidence            56778999999999999987 78888899987632 99999999998888753    553 222 2111     11    


Q ss_pred             HHhcCC-CccEEEECCCC-HHHHHHHHHHhccCCceEEEEc
Q 017335          267 KEMTDG-GADYCFECIGL-TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~~~~~-~~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ....+. .+|.|+--... ...++.+.+.|++| |+++.+.
T Consensus       165 ~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         165 SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            112233 78988854444 45689999999997 9998763

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.30  E-value=0.00058  Score=59.88  Aligned_cols=102  Identities=16%  Similarity=0.239  Sum_probs=72.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHH----c-C--Cce--EEcCCCCCCccHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----F-G--ITD--FINPATCGDKTVS  263 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----l-g--a~~--vi~~~~~~~~~~~  263 (373)
                      +....+++||++||=.|+|+ |.++..+|+..|.+ +|+.++.+++..+.+++    + +  .+.  ++..+      ..
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d------~~  160 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD------LA  160 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC------GG
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc------cc
Confidence            56778999999999999987 88899999988743 99999999998888864    2 1  122  22221      11


Q ss_pred             HHHHHhcCCCccEEE-ECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          264 QVIKEMTDGGADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       264 ~~i~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +  ..+.++.||.|| |-......+..+.+.|++| |+++.+-
T Consensus       161 ~--~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         161 D--SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             G--CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             c--ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence            0  012233799877 4444445688999999997 9998763

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=0.00055  Score=59.27  Aligned_cols=101  Identities=19%  Similarity=0.338  Sum_probs=68.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce---EEcCCCCCCccHHHHHHHhc--CCCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD---FINPATCGDKTVSQVIKEMT--DGGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~---vi~~~~~~~~~~~~~i~~~~--~~~~  274 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++...   ..|-.+  ++++.+.+.+..  .+++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccCCc
Confidence            5889999998 8999999999999999 9999999998877664 455321   222222  133333333332  2479


Q ss_pred             cEEEECCCCHH-------------------------HHHHHHHHh--ccCCceEEEEcc
Q 017335          275 DYCFECIGLTS-------------------------VMNDAFNSS--REGWGKTVILGV  306 (373)
Q Consensus       275 d~vid~~g~~~-------------------------~~~~~~~~l--~~~~G~~v~~G~  306 (373)
                      |+++++.|...                         ....+++.|  +.+ |+++.++.
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~II~isS  137 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH-GRIITIGS  137 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECC
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC-CEeeeecc
Confidence            99999877411                         344555665  344 99999975

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00024  Score=60.93  Aligned_cols=106  Identities=16%  Similarity=0.157  Sum_probs=72.4

Q ss_pred             hhhhHHHHHHHHh--CCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCC-------ceE
Q 017335          186 GVSTGVGAAWKVA--GVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGI-------TDF  251 (373)
Q Consensus       186 ~~~ta~~~~~~~~--~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga-------~~v  251 (373)
                      +...|.  +++..  .+++|++||-+|+|. |..++.+|+..|. .+|++++.+++-.+.+++    .+.       ..+
T Consensus        60 P~~~a~--~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~  136 (224)
T d1i1na_          60 PHMHAY--ALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQL  136 (224)
T ss_dssp             HHHHHH--HHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEE
T ss_pred             hHHHHH--HHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEE
Confidence            444443  44544  689999999999987 8888899998763 389999999987776642    221       112


Q ss_pred             EcCCCCCCccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335          252 INPATCGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       252 i~~~~~~~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ...+.      .   ....+ +.||.|+.+.......+.+++.|++| |+++..
T Consensus       137 ~~gD~------~---~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         137 VVGDG------R---MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             EESCG------G---GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             EEeec------c---cccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            21111      0   01112 27999997776656567889999997 999874

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.26  E-value=0.00096  Score=58.11  Aligned_cols=125  Identities=18%  Similarity=0.270  Sum_probs=75.8

Q ss_pred             cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      ...+.|.+++.+....--.+.++.  .++.  ...++|++||=+|+|. |.+++.+++ .|. +|+++|.+++..+.+++
T Consensus        88 ~~~i~i~pg~aFGTG~H~TT~l~l--~~l~--~~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~  160 (254)
T d2nxca1          88 EIPLVIEPGMAFGTGHHETTRLAL--KALA--RHLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEA  160 (254)
T ss_dssp             SEEEECCCC-----CCSHHHHHHH--HHHH--HHCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHH
T ss_pred             ceEEEEccccccCccccchhhHHH--HHHH--hhcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHH
Confidence            445666666665555433322221  1121  2368999999999976 666665554 687 89999999998877753


Q ss_pred             ----cCCc-eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH---HHHHHHHHhccCCceEEEEccc
Q 017335          246 ----FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       246 ----lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                          .|.. .++..      ++.+   ....+.||+|+.......   .+..+.+.|++| |++++.|..
T Consensus       161 na~~n~~~~~~~~~------d~~~---~~~~~~fD~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgil  220 (254)
T d2nxca1         161 NAKRNGVRPRFLEG------SLEA---ALPFGPFDLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             HHHHTTCCCEEEES------CHHH---HGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             HHHHcCCceeEEec------cccc---cccccccchhhhccccccHHHHHHHHHHhcCCC-cEEEEEecc
Confidence                3432 33322      2221   122348999996554332   356788899997 999987764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.0012  Score=53.68  Aligned_cols=93  Identities=11%  Similarity=-0.019  Sum_probs=62.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cC---CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG---ITDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lg---a~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ..+|++|||+|+|+.+.+++..+..+|+ +|+.+.|+.++.+.+.+ +.   ....+..+            +.....+|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~------------~~~~~~~d   81 (170)
T d1nyta1          15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD------------ELEGHEFD   81 (170)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG------------GGTTCCCS
T ss_pred             CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccccc------------cccccccc
Confidence            4678999999999999999999999999 79999999998777654 22   21222111            11123799


Q ss_pred             EEEECCCCHHH---HHHHHHHhccCCceEEEEcc
Q 017335          276 YCFECIGLTSV---MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g~~~~---~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +|++|+.....   ...-...++++ ..++++-.
T Consensus        82 liIN~Tp~G~~~~~~~~~~~~~~~~-~~v~D~vY  114 (170)
T d1nyta1          82 LIINATSSGISGDIPAIPSSLIHPG-IYCYDMFY  114 (170)
T ss_dssp             EEEECCSCGGGTCCCCCCGGGCCTT-CEEEESCC
T ss_pred             eeecccccCcccCCCCCcHHHhccC-cEEEEeec
Confidence            99999875431   00112346665 66666643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.23  E-value=0.0013  Score=57.11  Aligned_cols=104  Identities=18%  Similarity=0.327  Sum_probs=67.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-----HHcCCceE-EcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----KKFGITDF-INPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-----~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+     ++.|.... +..+-..+.++.+.+.+...  +
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999998 8999999999999999 999999998876543     33454322 22221111233333333222  3


Q ss_pred             CccEEEECCCCHH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 017335          273 GADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~G~  306 (373)
                      ++|+++++.|...                         ....+++.|+. ++|+++.++.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence            7999999987411                         34456666743 2279998875

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.23  E-value=0.013  Score=46.83  Aligned_cols=66  Identities=20%  Similarity=0.313  Sum_probs=49.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|.|+|.|.+|...+..++..|. +|++.++++++.+.+++.|. +...+..+    .       .  ..+|+||-++..
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~----~-------~--~~~DiIilavp~   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS----L-------L--QTAKIIFLCTPI   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG----G-------G--TTCSEEEECSCH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc----c-------c--cccccccccCcH
Confidence            58899999999998888899999 99999999999999988884 34332211    0       1  256777777764


Q ss_pred             H
Q 017335          284 T  284 (373)
Q Consensus       284 ~  284 (373)
                      .
T Consensus        68 ~   68 (165)
T d2f1ka2          68 Q   68 (165)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00072  Score=58.52  Aligned_cols=79  Identities=13%  Similarity=0.156  Sum_probs=56.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++..+.+..+- .+.+-.+++.+.. +++|++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~-g~iDilVn   82 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL-GDWEATERALGSV-GPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT-TCHHHHHHHHTTC-CCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeC-CCHHHHHHHHHHh-CCceEEEe
Confidence            6899999998 8999999999999999 9999999999877764 444333322222 1233333333222 37999999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        83 nAg~   86 (244)
T d1pr9a_          83 NAAV   86 (244)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8875

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.21  E-value=0.00078  Score=55.34  Aligned_cols=100  Identities=8%  Similarity=0.045  Sum_probs=67.3

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-Cc-----------------eEEcCCC
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-IT-----------------DFINPAT  256 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a~-----------------~vi~~~~  256 (373)
                      +....+.||.+||.+|+|. |..+..+|+. |+ +|+++|.+++..+.+++.. ..                 .++..+-
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            4556899999999999987 7888888874 99 9999999999999887531 10                 1111111


Q ss_pred             CCCccHHHHHHHhcCCCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEc
Q 017335          257 CGDKTVSQVIKEMTDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       257 ~~~~~~~~~i~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                         .++...    ....+|+|++....        ...+..+.+.|++| |++++..
T Consensus        90 ---~~l~~~----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 ---FALTAR----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             ---SSSTHH----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ---cccccc----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence               011000    01168999874431        23577888999997 9876544

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.20  E-value=0.0007  Score=58.57  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=56.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+ +++..+ .|-.+  .+++.+.+.+...  +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC--HHHHHHHHHHHHHhcCCceE
Confidence            4789999998 8999999999999999 99999999988877654 555433 22222  2333333333222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998874

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=9.9e-05  Score=64.02  Aligned_cols=99  Identities=19%  Similarity=0.233  Sum_probs=71.5

Q ss_pred             HHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHH
Q 017335          193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQV  265 (373)
Q Consensus       193 ~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~  265 (373)
                      .+....+++||++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++..+.         
T Consensus        24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~---------   92 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---------   92 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---------
T ss_pred             HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhHH---------
Confidence            366788999999999999976 6677788888898 99999999987776654    4532   2332221         


Q ss_pred             HHHhc-CCCccEEEECC------CCHHHHHHHHHHhccCCceEEEE
Q 017335          266 IKEMT-DGGADYCFECI------GLTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       266 i~~~~-~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       .++. ++.||+|+..-      .-...+..+.+.|++| |+++..
T Consensus        93 -~~~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~  136 (245)
T d1nkva_          93 -AGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIG  136 (245)
T ss_dssp             -TTCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEE
T ss_pred             -hhccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEE
Confidence             1222 33899998531      2355788999999997 998765

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.14  E-value=0.003  Score=47.56  Aligned_cols=92  Identities=9%  Similarity=-0.008  Sum_probs=63.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP--EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++...  +...++++ +.-..+. +.+.+.++         .++++|+-
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~-~~i~~~~-~~~~~~dl---------~~~~lv~~   78 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANE-GMLTLVE-GPFDETLL---------DSCWLAIA   78 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTT-TSCEEEE-SSCCGGGG---------TTCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhc-CCceeec-cCCCHHHh---------CCCcEEee
Confidence            47899999999999999999999999 787776544  33333332 2222222 11111221         27999999


Q ss_pred             CCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          280 CIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       280 ~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +++....-....+..++. |..+.+..
T Consensus        79 at~d~~~n~~i~~~a~~~-~ilVNv~D  104 (113)
T d1pjqa1          79 ATDDDTVNQRVSDAAESR-RIFCNVVD  104 (113)
T ss_dssp             CCSCHHHHHHHHHHHHHT-TCEEEETT
T ss_pred             cCCCHHHHHHHHHHHHHc-CCEEEeCC
Confidence            999988455777888886 98888764

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.001  Score=57.45  Aligned_cols=79  Identities=14%  Similarity=0.109  Sum_probs=55.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++..+.+.-+- .+.+-.+++.+.. +++|++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~-g~iDilVn   80 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDL-GDWDATEKALGGI-GPVDLLVN   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT-TCHHHHHHHHTTC-CCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeC-CCHHHHHHHHHHc-CCCeEEEE
Confidence            5899999998 8999999999999999 9999999988876654 444323332222 1233333332222 37999999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      +.|.
T Consensus        81 nAg~   84 (242)
T d1cyda_          81 NAAL   84 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            8774

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.09  E-value=0.004  Score=51.44  Aligned_cols=76  Identities=16%  Similarity=0.184  Sum_probs=55.3

Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CC-ceEEcCCCCCCccHHHHHHHhcCC
Q 017335          200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GI-TDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga-~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      --.|++|||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ +    .. ....+-.+      .+.+.+.. +
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~-~   91 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAV-K   91 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHT-T
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc------HHHHHHHh-c
Confidence            447999999998 9999999999999999 99999999988766643 2    21 22333332      22333333 3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|++|++.|.
T Consensus        92 ~iDilin~Ag~  102 (191)
T d1luaa1          92 GAHFVFTAGAI  102 (191)
T ss_dssp             TCSEEEECCCT
T ss_pred             CcCeeeecCcc
Confidence            79999999773

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00022  Score=64.57  Aligned_cols=104  Identities=13%  Similarity=0.229  Sum_probs=69.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHH----cC-----------Cce--EEcCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----FG-----------ITD--FINPA  255 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~----lg-----------a~~--vi~~~  255 (373)
                      +....+++||++||=.|+|+ |.++..+|+..|.+ +|+.++.+++..+.+++    ++           .+.  +.+.+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            45678999999999999987 88999999988743 89999999998887753    11           111  22221


Q ss_pred             CCCCccHHHHHHHhcCCCccEEE-ECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          256 TCGDKTVSQVIKEMTDGGADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      -   .++.   .....+.+|.|| |-......+..+.+.|++| |+++.+-
T Consensus       169 i---~~~~---~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 I---SGAT---EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             T---TCCC----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             h---hhcc---cccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            1   1111   111223688888 4333334588999999997 9998773

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.08  E-value=0.0029  Score=55.02  Aligned_cols=79  Identities=19%  Similarity=0.118  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-E--EcCCCCCCccHHH---HHHHhc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-F--INPATCGDKTVSQ---VIKEMT  270 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-v--i~~~~~~~~~~~~---~i~~~~  270 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.+... .  .|-.+  .++..+   .+.+..
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHHh
Confidence            5899999998 8999999999999999 9999999988876653    233221 1  22222  122222   333333


Q ss_pred             CCCccEEEECCCC
Q 017335          271 DGGADYCFECIGL  283 (373)
Q Consensus       271 ~~~~d~vid~~g~  283 (373)
                      ++.+|+++++.|.
T Consensus        84 ~g~idilvnnAG~   96 (259)
T d1xq1a_          84 GGKLDILINNLGA   96 (259)
T ss_dssp             TTCCSEEEEECCC
T ss_pred             CCCcccccccccc
Confidence            4579999999885

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.07  E-value=0.001  Score=56.87  Aligned_cols=99  Identities=18%  Similarity=0.253  Sum_probs=69.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      +...++++||++||=+|+|. |..+..+++. +. +|+++|.+++-.+.+++    .|.+  .++..+.   .++     
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~-----   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc---ccc-----
Confidence            67889999999999999987 7888888875 55 99999999987766643    3332  2222221   111     


Q ss_pred             HhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEE
Q 017335          268 EMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       268 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .+.++.||+|+..-.      -...+..+.+.|+++ |+++..
T Consensus        77 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~  118 (234)
T d1xxla_          77 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLV  118 (234)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEE
Confidence            122347999996433      234688999999997 998775

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.04  E-value=0.0021  Score=56.00  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=56.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-EEcCCCCCCcc----HHHHHHHhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKT----VSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-vi~~~~~~~~~----~~~~i~~~~~  271 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+... .+..+- .+.+    +.+.+.+..+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-LSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeec-CCHHHHHHHHHHHHHHhC
Confidence            6899999998 8999999999999999 999999999876654    3345433 222221 1132    2333444444


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +..|+++++.|.
T Consensus        83 g~idilinnag~   94 (258)
T d1ae1a_          83 GKLNILVNNAGV   94 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCcEEEeccccc
Confidence            579999998875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00098  Score=58.45  Aligned_cols=105  Identities=15%  Similarity=0.119  Sum_probs=66.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCce-EEcCCCCCCccHHHHHHHh-c--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITD-FINPATCGDKTVSQVIKEM-T--D  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~~-vi~~~~~~~~~~~~~i~~~-~--~  271 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.+     .+... .+..+. .+.+....+.+. .  .
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-EDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhh-hhHHHHHHHHHHHHHHh
Confidence            5899999998 8999999999999999 99999999998877642     23222 222221 112333222222 1  2


Q ss_pred             CCccEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 017335          272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       272 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      +..|+++++.|...                         ....++..++.++|+++.++...
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~  152 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLA  152 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccch
Confidence            37899988766411                         23344445544238988887644

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.0032  Score=54.64  Aligned_cols=81  Identities=19%  Similarity=0.299  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC-ceE--EcCCCCCCccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-TDF--INPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga-~~v--i~~~~~~~~~~~~~i~~~~~--  271 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+. ..+  +.-+-..++++.+.+.+...  
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5789999998 8999999999999999 9999999998877653    3332 122  21221112333333333322  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++++.|.
T Consensus        88 g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 SGVDICINNAGL   99 (257)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEecccc
Confidence            479999998875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.02  E-value=0.0017  Score=52.49  Aligned_cols=97  Identities=12%  Similarity=-0.004  Sum_probs=65.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      ++++|||+|+|.+|..+++.+...|. +|++++++.++.+.+.+ ++...+.....   ... ....... ...|.++.+
T Consensus         1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~---~~~-~~~~~~i-~~~~~~i~~   74 (182)
T d1e5qa1           1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV---NDD-AALDAEV-AKHDLVISL   74 (182)
T ss_dssp             CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT---TCH-HHHHHHH-TTSSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccc---cch-hhhHhhh-hccceeEee
Confidence            36899999999999999999999999 89999999999888765 43322222221   111 1111111 257888887


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEc
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ............++..+ -.++...
T Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~   98 (182)
T d1e5qa1          75 IPYTFHATVIKSAIRQK-KHVVTTS   98 (182)
T ss_dssp             SCGGGHHHHHHHHHHHT-CEEECSS
T ss_pred             ccchhhhHHHHHHHhhc-cceeecc
Confidence            77666455555666665 6666554

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.01  E-value=0.00086  Score=57.24  Aligned_cols=93  Identities=12%  Similarity=0.139  Sum_probs=69.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      ..++.+||=+|+|. |..+..+++ .|+ +|+++|.+++..+.+++-+...++..+.   .++     ...++.+|+|+.
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~---~~l-----~~~~~~fD~ii~  108 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA---EDL-----PFPSGAFEAVLA  108 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT---TSC-----CSCTTCEEEEEE
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc---ccc-----ccccccccceee
Confidence            56788999999986 888888876 588 9999999999999999877666665443   222     122348999986


Q ss_pred             CCC-------CHHHHHHHHHHhccCCceEEEE
Q 017335          280 CIG-------LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       280 ~~g-------~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ...       ....+..+.+.|++| |.++..
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            543       223577888999997 988754

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.97  E-value=0.002  Score=57.22  Aligned_cols=101  Identities=15%  Similarity=0.199  Sum_probs=70.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHh
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.+..++++|++||=+|+|- |-.+..+|+..|+ +|++++.+++..+.++    +.|....+....   .++     ..
T Consensus        53 ~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~---~d~-----~~  122 (291)
T d1kpia_          53 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGW-----EE  122 (291)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE---CCG-----GG
T ss_pred             HHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh---hcc-----cc
Confidence            56888999999999999975 4567788888999 9999999998766654    455332211111   121     12


Q ss_pred             cCCCccEEEE-----CCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCFE-----CIGL----------TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vid-----~~g~----------~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .++.||.|+.     .++.          ...+..+.+.|+|| |++++-.
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~  172 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHT  172 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEE
Confidence            2348998874     3332          34688999999997 9988643

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.96  E-value=0.0014  Score=57.36  Aligned_cols=80  Identities=21%  Similarity=0.278  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---CceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+. +++   ....+..+-..++++.+.+.+...  +.+
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            6899999998 8999999999999999 9999999998877654 343   222232222112333333333322  479


Q ss_pred             cEEEECCC
Q 017335          275 DYCFECIG  282 (373)
Q Consensus       275 d~vid~~g  282 (373)
                      |+++++.|
T Consensus        84 D~lVnnAG   91 (268)
T d2bgka1          84 DIMFGNVG   91 (268)
T ss_dssp             CEEEECCC
T ss_pred             ceeccccc
Confidence            99999887

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.96  E-value=0.0023  Score=55.42  Aligned_cols=81  Identities=14%  Similarity=0.206  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceE-EcCCCCCCccHHHHHHHhc--CCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF-INPATCGDKTVSQVIKEMT--DGG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~v-i~~~~~~~~~~~~~i~~~~--~~~  273 (373)
                      .++++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.    +.|.+.. +..+-..++++.+.+.+..  .+.
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999998 8999999999989999 9999999988876553    3454322 2222111123333333322  247


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus        88 iDilvnnag~   97 (251)
T d2c07a1          88 VDILVNNAGI   97 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceeeeecccc
Confidence            9999998774

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.95  E-value=0.00062  Score=58.18  Aligned_cols=107  Identities=15%  Similarity=0.203  Sum_probs=67.5

Q ss_pred             hhhhHHHHHHHHh--CCCCCCEEEEECCChHHHHHHHHHHH---CCC---CeEEEEcCChhHHHHHHH---------cCC
Q 017335          186 GVSTGVGAAWKVA--GVEVGSTVAIFGLGAVGLAVAEGARL---NRA---SKIIGVDINPEKFEIGKK---------FGI  248 (373)
Q Consensus       186 ~~~ta~~~~~~~~--~~~~~~~VlI~G~G~vG~~a~~la~~---~G~---~~Vi~~~~~~~~~~~~~~---------lga  248 (373)
                      +...|.  ++...  .++++++||.+|+|. |..++.+++.   .|.   .+|+.++.+++-.+.+++         .+.
T Consensus        64 P~~~a~--~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~  140 (223)
T d1r18a_          64 PHMHAF--ALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS  140 (223)
T ss_dssp             HHHHHH--HHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHH--HHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCc
Confidence            444443  34444  789999999999865 5555555554   442   279999999887666542         121


Q ss_pred             c--eEEcCCCCCCccHHHHHHHhc-CCCccEEEECCCCHHHHHHHHHHhccCCceEEE-Ec
Q 017335          249 T--DFINPATCGDKTVSQVIKEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVI-LG  305 (373)
Q Consensus       249 ~--~vi~~~~~~~~~~~~~i~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~-~G  305 (373)
                      .  .++..+.      .   .... .+.||.|+-+.+.....+..++.|++| |+++. +|
T Consensus       141 ~nv~~~~~d~------~---~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg  191 (223)
T d1r18a_         141 GQLLIVEGDG------R---KGYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVG  191 (223)
T ss_dssp             TSEEEEESCG------G---GCCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             cEEEEEeccc------c---cccccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEe
Confidence            1  2222221      0   1111 237999997777655567888999997 99976 44

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0065  Score=48.71  Aligned_cols=112  Identities=14%  Similarity=0.210  Sum_probs=80.8

Q ss_pred             HHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHh
Q 017335          191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       191 ~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.++.+..+ .-.|++|+|+|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +.        .+.+.+   
T Consensus        11 ~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~--------~~~~a~---   77 (163)
T d1li4a1          11 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT--------TMDEAC---   77 (163)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHHHT---
T ss_pred             HHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee--------ehhhhh---
Confidence            334556555 4589999999999999999999999999 999999998776555544542 21        121111   


Q ss_pred             cCCCccEEEECCCCHH-HHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh
Q 017335          270 TDGGADYCFECIGLTS-VMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK  322 (373)
Q Consensus       270 ~~~~~d~vid~~g~~~-~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~  322 (373)
                        ...|+++-++|... .-..-++.|+++ ..++.+|...    .+++...+..
T Consensus        78 --~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghfd----~EId~~~L~~  124 (163)
T d1li4a1          78 --QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHFD----VEIDVKWLNE  124 (163)
T ss_dssp             --TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSST----TSBCHHHHHH
T ss_pred             --hhccEEEecCCCccchhHHHHHhccCC-eEEEEecccc----ceecHHHHhh
Confidence              26899999999744 345788899997 7777777643    3666666554

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0013  Score=56.76  Aligned_cols=77  Identities=21%  Similarity=0.251  Sum_probs=57.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+....+  +.+...   .+..+.+.+.. ++.|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~-~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEV-ERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHC-SCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccc---ccccccccccc-ccceeEE
Confidence            6889999998 8999999999999999 9999999998887776643322  233222   55555554443 3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        80 n~ag~   84 (245)
T d2ag5a1          80 NVAGF   84 (245)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99775

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.93  E-value=0.0052  Score=49.44  Aligned_cols=91  Identities=23%  Similarity=0.302  Sum_probs=62.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      ++|+|+|.|.+|...+..++..|.. +|++++++++.++.+++.|. +.+.....           .......|+|+-|+
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-----------~~~~~~~dlIila~   70 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----------KVEDFSPDFVMLSS   70 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-----------GGGGTCCSEEEECS
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-----------hhhccccccccccC
Confidence            3699999999999999999988853 89999999999999999885 44443221           01112577888777


Q ss_pred             CCHH---HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS---VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~---~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....   .+..+.+.++++ ..++.++.
T Consensus        71 p~~~~~~vl~~l~~~~~~~-~ii~d~~s   97 (171)
T d2g5ca2          71 PVRTFREIAKKLSYILSED-ATVTDQGS   97 (171)
T ss_dssp             CHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             Cchhhhhhhhhhhcccccc-cccccccc
Confidence            7443   233445555664 56666654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.92  E-value=0.0052  Score=47.40  Aligned_cols=75  Identities=19%  Similarity=0.248  Sum_probs=56.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|+|.|.|.+|...++.+...|. .|++++.++++.+.+++ ++. .++..+. .+.+   .+.+..-..+|.++-+++.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~-~vi~Gd~-~~~~---~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDA-LVINGDC-TKIK---TLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSS-EEEESCT-TSHH---HHHHTTTTTCSEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhh-hhccCcc-cchh---hhhhcChhhhhhhcccCCc
Confidence            58999999999999999999999 99999999999888765 565 4554443 1133   3333322379999999888


Q ss_pred             HH
Q 017335          284 TS  285 (373)
Q Consensus       284 ~~  285 (373)
                      ..
T Consensus        76 d~   77 (132)
T d1lssa_          76 EE   77 (132)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.92  E-value=0.0015  Score=56.52  Aligned_cols=82  Identities=13%  Similarity=0.142  Sum_probs=56.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce-EEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTD--GGAD  275 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d  275 (373)
                      -.|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+. +++... .+.-+-...+++.+.+.+...  +++|
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            36899999998 8999999999999999 9999999998877664 454322 222221011233333333322  3799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++++.|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999885

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.90  E-value=0.003  Score=54.90  Aligned_cols=80  Identities=13%  Similarity=0.119  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCc-cHHHHHHH---hcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDK-TVSQVIKE---MTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~-~~~~~i~~---~~~  271 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.|... .+..+- .++ ++.+.+.+   ..+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-SSRSERQELMNTVANHFH   84 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeC-CCHHHHHHHHHHHHHHhC
Confidence            6899999998 8999999999999999 9999999988876653    334322 222221 122 22222222   223


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +.+|+++++.|.
T Consensus        85 ~~idilvnnAG~   96 (259)
T d2ae2a_          85 GKLNILVNNAGI   96 (259)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCceEEEECCce
Confidence            369999999884

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.86  E-value=0.0016  Score=55.11  Aligned_cols=100  Identities=15%  Similarity=0.292  Sum_probs=69.8

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~  267 (373)
                      +.+..+++++++||-+|+|. |..+..+++. |. +|+++|.+++-.+.+++    .+.+  .++..+.   .++     
T Consensus         7 ll~~~~l~~~~rVLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~l-----   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATGG-GHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHhcCCCCcCEEEEecccC-cHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc---ccc-----
Confidence            66789999999999999974 7777777755 66 99999999987777643    4433  2333332   111     


Q ss_pred             HhcCCCccEEEECCC-----C-HHHHHHHHHHhccCCceEEEEc
Q 017335          268 EMTDGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       268 ~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .+..+.||+|+..-.     . ...+..+.+.|++| |+++..-
T Consensus        76 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          76 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            122347999985422     2 34688999999997 9988753

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.85  E-value=0.0026  Score=56.07  Aligned_cols=100  Identities=12%  Similarity=0.141  Sum_probs=69.2

Q ss_pred             HHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHH
Q 017335          193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIK  267 (373)
Q Consensus       193 ~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~  267 (373)
                      .+.+..++++|++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|.. .+....    .++    +
T Consensus        43 ~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~----~d~----~  112 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL----QGW----E  112 (280)
T ss_dssp             HHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE----SCG----G
T ss_pred             HHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh----hhh----h
Confidence            366778899999999999975 4456778888899 99999999998877754    3421 111111    111    1


Q ss_pred             HhcCCCccEEEE-----CCCC---HHHHHHHHHHhccCCceEEEE
Q 017335          268 EMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       268 ~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       ..++.+|.|+.     .++.   ...+..+.+.|+|+ |+++.-
T Consensus       113 -~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~  155 (280)
T d2fk8a1         113 -DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQ  155 (280)
T ss_dssp             -GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             -hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEE
Confidence             12347898873     3332   34588899999997 998764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.85  E-value=0.0019  Score=53.16  Aligned_cols=99  Identities=14%  Similarity=0.197  Sum_probs=67.9

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ce--EEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TD--FINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~--vi~~~~~~~~~~~~~i  266 (373)
                      +....+++++++||=+|+|. |..++.+|+. +. +|++++.+++..+.+++    .|. +.  ++..      +..+. 
T Consensus        25 il~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g------da~~~-   94 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG------DAPEA-   94 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES------CHHHH-
T ss_pred             HHHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC------chhhc-
Confidence            44567899999999999865 5566667764 44 99999999988777753    553 22  3322      22222 


Q ss_pred             HHhcC-CCccEEEECCCC---HHHHHHHHHHhccCCceEEEEc
Q 017335          267 KEMTD-GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~~~~-~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                        ..+ ..+|+|+.....   ...++.+.+.|+++ |+++...
T Consensus        95 --~~~~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          95 --LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             --HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             --ccccCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence              222 389999865442   34577888999997 9988654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.84  E-value=0.0015  Score=56.80  Aligned_cols=81  Identities=25%  Similarity=0.293  Sum_probs=56.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ +++|.... +.-+-..++++.+.+.+...  +++|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5789999998 8999999999999999 999999998887665 55775432 21111112333333333322  47999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        83 lVnnAg~   89 (256)
T d1k2wa_          83 LVNNAAL   89 (256)
T ss_dssp             EEECCCC
T ss_pred             EEeeccc
Confidence            9999884

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.84  E-value=0.0015  Score=57.59  Aligned_cols=78  Identities=21%  Similarity=0.206  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceE-E--cCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF-I--NPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~v-i--~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. ++|.... +  |-.+  .+++.+.+.+...  +.+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHhCCc
Confidence            5899999998 8999999999999999 9999999998876654 4554322 2  2222  1233333333222  379


Q ss_pred             cEEEECCC
Q 017335          275 DYCFECIG  282 (373)
Q Consensus       275 d~vid~~g  282 (373)
                      |+++++.|
T Consensus        81 dilvnnAG   88 (276)
T d1bdba_          81 DTLIPNAG   88 (276)
T ss_dssp             CEEECCCC
T ss_pred             cccccccc
Confidence            99999877

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.83  E-value=0.0021  Score=52.29  Aligned_cols=93  Identities=18%  Similarity=0.214  Sum_probs=61.2

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCC-------CCccHHHHHHHhcCCCcc
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC-------GDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~-------~~~~~~~~i~~~~~~~~d  275 (373)
                      .+++.|+|+|.+|++.+..+...|. .|.++++++++.+.+++.+..........       ...+..+.+     ..+|
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDAD   74 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCS
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCC
Confidence            3689999999999999999999999 99999999999998887653221111000       001222222     2689


Q ss_pred             EEEECCCCHH---HHHHHHHHhccCCceEE
Q 017335          276 YCFECIGLTS---VMNDAFNSSREGWGKTV  302 (373)
Q Consensus       276 ~vid~~g~~~---~~~~~~~~l~~~~G~~v  302 (373)
                      +||-++....   .++++...+.++ -.++
T Consensus        75 ~iii~v~~~~~~~~~~~i~~~l~~~-~~iv  103 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIASYISEG-QLII  103 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHGGGCCTT-CEEE
T ss_pred             EEEEEEchhHHHHHHHHhhhccCCC-CEEE
Confidence            9999998765   233344444553 4443

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.83  E-value=0.0018  Score=56.23  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=55.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce-EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~  276 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+. +++... .+..+-..++++.+.+.+...  +++|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            5899999998 8999999999999999 9999999998877654 455332 222221111333333333222  37999


Q ss_pred             EEECCCC
Q 017335          277 CFECIGL  283 (373)
Q Consensus       277 vid~~g~  283 (373)
                      ++++.|.
T Consensus        83 lVnnAg~   89 (254)
T d1hdca_          83 LVNNAGI   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EEecCcc
Confidence            9998874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.81  E-value=0.00027  Score=60.95  Aligned_cols=98  Identities=15%  Similarity=0.176  Sum_probs=63.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC----ccHHHHHHHhcCC-Ccc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD----KTVSQVIKEMTDG-GAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~----~~~~~~i~~~~~~-~~d  275 (373)
                      .|++|||+|+ +++|++.++.+...|+ +|+.+++++++...     ....+.... ..    ..+...+.+.... ++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS-----ASVIVKMTD-SFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS-----EEEECCCCS-CHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----ccceeeccc-CcHHHHHHHHHHHHHHhCCCCce
Confidence            4789999998 8999999999999999 99999876543211     111111111 00    1123333333333 799


Q ss_pred             EEEECCCCH-----------H---------------HHHHHHHHhccCCceEEEEccc
Q 017335          276 YCFECIGLT-----------S---------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       276 ~vid~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++++.|.-           .               ....+++.++++ |+++.++..
T Consensus        74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~  130 (236)
T d1dhra_          74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK  130 (236)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccH
Confidence            999987730           0               233466677887 999999754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.79  E-value=0.0036  Score=54.71  Aligned_cols=103  Identities=21%  Similarity=0.270  Sum_probs=68.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHH----HHHcCCceE-EcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~----~~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++. +..+.    +++.|.+.. +..+-...+++.+.+.+...  +
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4899999998 8999999999999999 898887664 43333    345565433 22222122344444443332  3


Q ss_pred             CccEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++|+++++.|...                         ....+...|..+ |+++.++.
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s  153 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGS  153 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECC
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-cccccccc
Confidence            7899999887521                         355677788886 88888865

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.0017  Score=56.45  Aligned_cols=80  Identities=19%  Similarity=0.194  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceE-EcCCCCCCc-cHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-INPATCGDK-TVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~v-i~~~~~~~~-~~~~~i~~~~~--~  272 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.... +..+- .++ ++.+.+.+...  +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv-s~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDI-TSEQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccC-CCHHHHHHHHHHHHHHcC
Confidence            6899999998 8999999999999999 999999998876654    34554322 22222 223 33222322222  3


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999998874

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.79  E-value=0.002  Score=57.00  Aligned_cols=97  Identities=13%  Similarity=0.163  Sum_probs=70.0

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-c--eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~--~vi~~~~~~~~~~~~~i  266 (373)
                      +.++.++++|++||-+|+|- |..++.+|+..|+ +|++++.+++..+++++    .|. +  .+..      .++    
T Consensus        54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~------~d~----  121 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL------AGW----  121 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE------SCG----
T ss_pred             HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH------hhh----
Confidence            56788899999999999976 6788889999999 99999999998887754    331 1  1221      121    


Q ss_pred             HHhcCCCccEEEE-----CCCC---HHHHHHHHHHhccCCceEEEE
Q 017335          267 KEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       267 ~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +++ ++.+|.|+.     .++.   ...+..+.+.|+++ |++++-
T Consensus       122 ~~~-~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~  165 (285)
T d1kpga_         122 EQF-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLH  165 (285)
T ss_dssp             GGC-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             hcc-cccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEE
Confidence            112 347888774     3433   34678899999997 998753

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.77  E-value=0.0027  Score=55.24  Aligned_cols=81  Identities=22%  Similarity=0.324  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG  273 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~  273 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.    +.|.+. .+.-+-..++++.+.+.+...  +.
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5899999998 8999999999999999 9999999998876654    345332 222221111333333333222  47


Q ss_pred             ccEEEECCCC
Q 017335          274 ADYCFECIGL  283 (373)
Q Consensus       274 ~d~vid~~g~  283 (373)
                      +|+++++.|.
T Consensus        83 iDilVnnaG~   92 (260)
T d1zema1          83 IDFLFNNAGY   92 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCeehhhhcc
Confidence            9999998773

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.0018  Score=56.76  Aligned_cols=101  Identities=17%  Similarity=0.249  Sum_probs=63.7

Q ss_pred             CCEE-EEECC-ChHHHHHHH-HHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCcc---HHHHHHHhcC
Q 017335          203 GSTV-AIFGL-GAVGLAVAE-GARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKT---VSQVIKEMTD  271 (373)
Q Consensus       203 ~~~V-lI~G~-G~vG~~a~~-la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~---~~~~i~~~~~  271 (373)
                      |.+| ||+|+ +++|+++++ |++..|+ +|+.+++++++.+.+.    +.|.. +++.-+-...++   +.+.+.+.. 
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-
Confidence            6677 67788 899998765 5666688 9999999998876653    33432 222222101122   223333322 


Q ss_pred             CCccEEEECCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+|+++++.|..                         .....++..|+++ |+++.++.
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence            3799999988841                         1344556677886 99998864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.0033  Score=54.18  Aligned_cols=106  Identities=16%  Similarity=0.179  Sum_probs=69.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCc-cHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDK-TVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~-~~~~~i~~~~--~~  272 (373)
                      .|+++||+|+ +++|...+..+...|+ +|+.+++++++++.+.    +.|.. +.+..+- .+. +....+....  .+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-SNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHHHcC
Confidence            5899999998 8999999988889999 9999999998876653    34533 2222222 123 2233333322  23


Q ss_pred             CccEEEECCCCHH-------------------------HHHHHHHHhcc-CCceEEEEcccCC
Q 017335          273 GADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEMH  309 (373)
Q Consensus       273 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~G~~~~  309 (373)
                      .+|+++++.|...                         +...+++.++. ++|+++.++....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            7999999988521                         23345555533 2378998886543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.0067  Score=49.62  Aligned_cols=98  Identities=13%  Similarity=0.101  Sum_probs=62.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcC----C-ceEEcCCCCCCccHHHHHHHhcC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG----I-TDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lg----a-~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      -.+.+|+|+|+|+.+.+++..+...|+++++.+.+++++.+.+.    +++    . ..+.+..+     .. .+.+.. 
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~-   88 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-----QQ-AFAEAL-   88 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-----HH-HHHHHH-
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc-----cc-chhhhh-
Confidence            36789999999999999999999999989999999877655432    222    1 12233222     11 111111 


Q ss_pred             CCccEEEECCCCHHH------HHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLTSV------MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~~~------~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ..+|+||+|+.....      +..-+..++++ ..++++-.
T Consensus        89 ~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~Y  128 (182)
T d1vi2a1          89 ASADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECVY  128 (182)
T ss_dssp             HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECCC
T ss_pred             cccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhhc
Confidence            268999999873220      01113456776 88888854

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.68  E-value=0.0035  Score=54.37  Aligned_cols=80  Identities=11%  Similarity=0.194  Sum_probs=53.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceEEcCCCCCCc-cHHHHHHHhcC--CCc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDK-TVSQVIKEMTD--GGA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~vi~~~~~~~~-~~~~~i~~~~~--~~~  274 (373)
                      |+.+||+|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|.......-+..+. ++.+.+.+...  +++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            678899998 8999999999999999 999999998876654    34454322111111123 33333333222  479


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++++.|.
T Consensus        81 DilVnnAG~   89 (257)
T d2rhca1          81 DVLVNNAGR   89 (257)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEecccc
Confidence            999999874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.68  E-value=0.0029  Score=55.55  Aligned_cols=102  Identities=14%  Similarity=0.070  Sum_probs=70.7

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i  266 (373)
                      +.....+.++++||=+|+|. |..+..+++..|+ +|++++.++...+.+++    .|..   .++..+.   .++    
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~---~~l----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc---ccc----
Confidence            44566799999999999976 7777888888898 99999999987776653    3432   2333222   111    


Q ss_pred             HHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                       ...++.||+|+-.-.      ....+..+.+.|++| |+++....
T Consensus       130 -~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 -PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             -SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence             112237999985322      234688999999997 99887643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.68  E-value=0.0029  Score=54.92  Aligned_cols=104  Identities=18%  Similarity=0.297  Sum_probs=67.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH----HHcCCceE-EcCCCCCCccHHHHHHHhcC--
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~lga~~v-i~~~~~~~~~~~~~i~~~~~--  271 (373)
                      -.|++|||+|+ +++|.+.++.+...|+ +|+.+ .++++..+.+    ++.|.+.. +..+-...++..+.+.....  
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            36899999998 8999999999999999 78775 4555544443    45665432 32222112333333333322  


Q ss_pred             CCccEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEcc
Q 017335          272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++.|+++++.|...                         ....+++.++++ |.++.+..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence            37999999988521                         455677788886 88777754

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.67  E-value=0.0059  Score=52.10  Aligned_cols=73  Identities=19%  Similarity=0.142  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.   ++.+...+. .+-  .+++ +.+.+.. +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~-~Dv--~~~~-~~~~~~~-g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CDL--RKDL-DLLFEKV-KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CCT--TTCH-HHHHHHS-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEE-cch--HHHH-HHHHHHh-CCCcEEEec
Confidence            4789999998 8999999999999999 999999987654   445543332 121  1223 3333332 479999998


Q ss_pred             CCC
Q 017335          281 IGL  283 (373)
Q Consensus       281 ~g~  283 (373)
                      .|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.66  E-value=0.0024  Score=55.28  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC--c-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--T-DFINPATCGDKTVSQVIKEMTD--GGA  274 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga--~-~vi~~~~~~~~~~~~~i~~~~~--~~~  274 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+ ++.  . ..+..+-....++.+.+.+...  +++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            5889999998 8999999999999999 99999999988777643 331  1 2222222111222222322222  479


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++++.|.
T Consensus        84 DiLVnnAg~   92 (251)
T d1zk4a1          84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEecccc
Confidence            999998875

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.64  E-value=0.0035  Score=55.35  Aligned_cols=81  Identities=12%  Similarity=0.064  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-----HcCCce-EEcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----KFGITD-FINPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-----~lga~~-vi~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.     +.|... .+..+-...+++...+....  .+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            4799999998 8999999999999999 9999999987755432     334332 33222211122222222222  24


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            89999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.64  E-value=0.0035  Score=53.89  Aligned_cols=103  Identities=21%  Similarity=0.254  Sum_probs=68.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCc-cHHHHHHHhcC--CCccE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDK-TVSQVIKEMTD--GGADY  276 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~-~~~~~i~~~~~--~~~d~  276 (373)
                      .|+++||+|+ +++|.+.++-+...|+ +|+.+.+++++.+.+ ++++.+.....-+..++ ++.+.+.+...  +++|+
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            6899999998 8999999999999999 999999999887665 44675432111111122 33333333322  37999


Q ss_pred             EEECCCCHH-------------------------HHHHHHHHhccCCceEEEEcc
Q 017335          277 CFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       277 vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++++.+...                         .....+..++.+ +.++..+.
T Consensus        83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss  136 (241)
T d2a4ka1          83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGS  136 (241)
T ss_dssp             EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred             eccccccccccchhhhhccccccccccccccccccccccccccccc-cceeeccc
Confidence            999876411                         234455667775 77776654

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.61  E-value=0.0032  Score=53.71  Aligned_cols=102  Identities=17%  Similarity=0.180  Sum_probs=68.4

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc----CCceEEcCCCCCCccHHHHHHHhc
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~l----ga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      +...++||++||=+|+|+ |..+..+++..|. .+|++++.+++..+.+++.    +....+..+......+     ...
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~-----~~~  140 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEY-----RAL  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGG-----TTT
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccc-----ccc
Confidence            446799999999999987 8889999998874 3999999999988877542    2222222222001111     111


Q ss_pred             CCCccEEEECCCC----HHHHHHHHHHhccCCceEEEE
Q 017335          271 DGGADYCFECIGL----TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       271 ~~~~d~vid~~g~----~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      ...+|+++..+..    ...+..+.+.|+++ |+++.+
T Consensus       141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            2378988854432    22577888999997 988765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.57  E-value=0.0069  Score=53.81  Aligned_cols=102  Identities=18%  Similarity=0.235  Sum_probs=64.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh---------hHHHHH----HHcCCceEEcCCCCCCccHHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEIG----KKFGITDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~---------~~~~~~----~~lga~~vi~~~~~~~~~~~~~i~  267 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|++++++.         ++.+.+    ...+.....+..+  ..+..+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence            5889999998 8999999999999999 899986543         223222    2334444444443  133333333


Q ss_pred             Hhc--CCCccEEEECCCCHH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 017335          268 EMT--DGGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV  306 (373)
Q Consensus       268 ~~~--~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~G~  306 (373)
                      ...  -|++|+++++.|...                         ....++..|+. ++|+||.++.
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            322  247999999987411                         34445565632 2389999875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.53  E-value=0.0072  Score=52.09  Aligned_cols=84  Identities=15%  Similarity=0.100  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-------HHHHHHcCCceE-EcCCCCCCccHHHHHHH-
Q 017335          199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITDF-INPATCGDKTVSQVIKE-  268 (373)
Q Consensus       199 ~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-------~~~~~~lga~~v-i~~~~~~~~~~~~~i~~-  268 (373)
                      .++|+.++||+|+ |++|++.+..+-..|+++|+.+.+++.+       .+.+++.|+.-. +..+- .+.+-.+.+.+ 
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv-~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV-TDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcccccccccccc-chHHHHHHhhcc
Confidence            4789999999998 9999999988888898667777765322       223345665322 22222 22333333333 


Q ss_pred             hcCC-CccEEEECCCC
Q 017335          269 MTDG-GADYCFECIGL  283 (373)
Q Consensus       269 ~~~~-~~d~vid~~g~  283 (373)
                      .... ..|.++.+.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            3333 68999998874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.52  E-value=0.0035  Score=54.94  Aligned_cols=80  Identities=20%  Similarity=0.236  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC--c--eEEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--T--DFINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga--~--~vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+.    +.|.  .  ..+..+-..+.++.+.+.+... 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5889999998 8999999999999999 9999999988876653    3332  1  1222221111233333333322 


Q ss_pred             -CCccEEEECCC
Q 017335          272 -GGADYCFECIG  282 (373)
Q Consensus       272 -~~~d~vid~~g  282 (373)
                       |.+|+++++.|
T Consensus        82 ~G~iDilVnnAG   93 (274)
T d1xhla_          82 FGKIDILVNNAG   93 (274)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCceEEEeecc
Confidence             37999999876

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.50  E-value=0.0028  Score=55.07  Aligned_cols=81  Identities=17%  Similarity=0.210  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-----HHcCCceE-EcCCCCCCccHHHHHHHhc--CC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----KKFGITDF-INPATCGDKTVSQVIKEMT--DG  272 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-----~~lga~~v-i~~~~~~~~~~~~~i~~~~--~~  272 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+     ++.|.+.. +.-+-..++++.+.+.+..  -+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4789999998 8999999999999999 999999988765443     33454322 2222111123333333322  24


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        87 ~iDilVnnAg~   97 (260)
T d1h5qa_          87 PISGLIANAGV   97 (260)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCcEecccccc
Confidence            79999998874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.50  E-value=0.0056  Score=52.74  Aligned_cols=81  Identities=20%  Similarity=0.216  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH--HHHHHHcCCceEEcCCCCCCc-cHHHHHHHhcC--CCcc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITDFINPATCGDK-TVSQVIKEMTD--GGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~lga~~vi~~~~~~~~-~~~~~i~~~~~--~~~d  275 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++  .+.+++.|.......-+..+. ++.+.+.+...  +++|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999998 8999999999999999 99999987643  334456775432211111123 33333333222  4799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++++.|.
T Consensus        83 ilVnnAG~   90 (247)
T d2ew8a1          83 ILVNNAGI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999885

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0016  Score=55.56  Aligned_cols=98  Identities=18%  Similarity=0.202  Sum_probs=66.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc---eEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT---DFINPATCGDKTVSQVIKEMTDGGADY  276 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~---~vi~~~~~~~~~~~~~i~~~~~~~~d~  276 (373)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++....   .+.. ..   .+.......+..+.||.
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~fD~  124 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIP-LK---GLWEDVAPTLPDGHFDG  124 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEE-EE---SCHHHHGGGSCTTCEEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccc-cc---ccccccccccccccccc
Confidence            46889999999976 7788888887665 899999999998888764321   1110 11   22333333344458988


Q ss_pred             EE-ECCCC----------HHHHHHHHHHhccCCceEEEE
Q 017335          277 CF-ECIGL----------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       277 vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      |+ |.+..          ...+..+.+.|++| |+++..
T Consensus       125 i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         125 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             eeecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence            85 65443          12466788999997 998864

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0045  Score=53.57  Aligned_cols=79  Identities=25%  Similarity=0.298  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----C-Cce-E--EcCCCCCCccHHHHHHHhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----G-ITD-F--INPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----g-a~~-v--i~~~~~~~~~~~~~i~~~~~  271 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+ +    + ... .  .|-.+  .+++.+.+.+...
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHH
Confidence            4789999998 8999999999999999 99999999988766532 2    1 111 1  22222  1233333333322


Q ss_pred             --CCccEEEECCCC
Q 017335          272 --GGADYCFECIGL  283 (373)
Q Consensus       272 --~~~d~vid~~g~  283 (373)
                        +++|+++++.|.
T Consensus        79 ~~G~iDilVnnAg~   92 (254)
T d2gdza1          79 HFGRLDILVNNAGV   92 (254)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCcCeecccccc
Confidence              379999999885

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.46  E-value=0.0037  Score=54.41  Aligned_cols=80  Identities=21%  Similarity=0.219  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh-HHH----HHHHcCCceE-EcCCCCCCc-cHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGITDF-INPATCGDK-TVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~----~~~~lga~~v-i~~~~~~~~-~~~~~i~~~~~--  271 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.+    .+++.|.+.. +..+- .++ ++.+.+.+...  
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDV-TVESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHh
Confidence            5789999998 8999999999999999 9999998754 333    2345564322 21221 123 33333333222  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++++.|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            379999998875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.45  E-value=0.015  Score=46.38  Aligned_cols=108  Identities=18%  Similarity=0.252  Sum_probs=80.1

Q ss_pred             HHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          194 AWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       194 ~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +.+... .-+|++++|.|-|-+|.-.++-+|.+|+ +|++++.++-+.-.+.--|. +|.        ...+.+     .
T Consensus        13 i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~--------~~~~a~-----~   77 (163)
T d1v8ba1          13 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVV--------TLDEIV-----D   77 (163)
T ss_dssp             HHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EEC--------CHHHHT-----T
T ss_pred             HHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccC--------chhHcc-----c
Confidence            445545 5789999999999999999999999999 99999999977655543444 232        222221     2


Q ss_pred             CccEEEECCCCHHH-HHHHHHHhccCCceEEEEcccCCCCccccCHHHHh
Q 017335          273 GADYCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL  321 (373)
Q Consensus       273 ~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~  321 (373)
                      ..|+++-++|.... -..-++.|+++ ..+...|...    .+++...+.
T Consensus        78 ~aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~GHfd----~EIdv~~L~  122 (163)
T d1v8ba1          78 KGDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIGHFD----DEIQVNELF  122 (163)
T ss_dssp             TCSEEEECCSSSSSBCHHHHTTCCTT-CEEEECSSTT----TSBCHHHHH
T ss_pred             cCcEEEEcCCCCccccHHHHHHhhCC-eEEEeccccc----hhhhhHHHH
Confidence            68999999998653 45678999997 8888888643    366766554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.45  E-value=0.0051  Score=53.11  Aligned_cols=81  Identities=16%  Similarity=0.286  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++    ..+....+..+-..++++.+.+.+...  +
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            5899999998 5  699999999999999 8999998876555443    234334443333112333332322222  4


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ++|+++++.|.
T Consensus        86 ~iDilVnnag~   96 (256)
T d1ulua_          86 GLDYLVHAIAF   96 (256)
T ss_dssp             SEEEEEECCCC
T ss_pred             CceEEEecccc
Confidence            79999998764

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.43  E-value=0.0031  Score=55.24  Aligned_cols=81  Identities=19%  Similarity=0.202  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC--ce--EEcCCCCCCccHHHHHHHhcC-
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--TD--FINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga--~~--vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+    .+.  ..  .+..+-...+++.+.+.+... 
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999998 8999999999999999 99999999988766542    332  11  222221011233333333322 


Q ss_pred             -CCccEEEECCCC
Q 017335          272 -GGADYCFECIGL  283 (373)
Q Consensus       272 -~~~d~vid~~g~  283 (373)
                       +++|+++++.|.
T Consensus        83 ~g~iDilvnnAG~   95 (272)
T d1xkqa_          83 FGKIDVLVNNAGA   95 (272)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCceEEEeCCcc
Confidence             379999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0058  Score=54.20  Aligned_cols=82  Identities=13%  Similarity=0.170  Sum_probs=54.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc--------CCceE-EcCCCCCCccHHHHHHHh
Q 017335          201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF--------GITDF-INPATCGDKTVSQVIKEM  269 (373)
Q Consensus       201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l--------ga~~v-i~~~~~~~~~~~~~i~~~  269 (373)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. ++        +...+ +..+-...+++.+.+.+.
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            47899999998 8999999999999999 9999999988765542 22        22221 222211123333333333


Q ss_pred             cC--CCccEEEECCCC
Q 017335          270 TD--GGADYCFECIGL  283 (373)
Q Consensus       270 ~~--~~~d~vid~~g~  283 (373)
                      ..  +++|+++++.|.
T Consensus        89 ~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          89 LDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHhCCeEEEEeeccc
Confidence            22  379999998874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.40  E-value=0.0067  Score=52.59  Aligned_cols=78  Identities=24%  Similarity=0.254  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----c--CCce-EE--cCCCCCCccHHHHHHHhcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GITD-FI--NPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----l--ga~~-vi--~~~~~~~~~~~~~i~~~~~  271 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+    .  +... .+  |-.+  .+++.+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence            5789999998 8999999999999999 99999999988765532    2  2221 12  3222  1333333333322


Q ss_pred             --CCccEEEECCC
Q 017335          272 --GGADYCFECIG  282 (373)
Q Consensus       272 --~~~d~vid~~g  282 (373)
                        +++|+++++.|
T Consensus        80 ~~G~iDiLVnnAG   92 (258)
T d1iy8a_          80 RFGRIDGFFNNAG   92 (258)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HhCCCCEEEECCc
Confidence              37999999877

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.39  E-value=0.0074  Score=48.90  Aligned_cols=93  Identities=11%  Similarity=-0.001  Sum_probs=60.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cC---CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG---ITDFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lg---a~~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      ..++++|+|+|+|+.+.+++..+...+. +|+.+.|+.++.+.+.+ ++   ....+..+            +.....+|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~------------~~~~~~~d   81 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMD------------SIPLQTYD   81 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------------GCCCSCCS
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhc------------cccccccc
Confidence            4578899999999999998888877665 99999999988776643 33   11122111            11123799


Q ss_pred             EEEECCCCHHH---HHHHHHHhccCCceEEEEcc
Q 017335          276 YCFECIGLTSV---MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g~~~~---~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++++|++....   .......++++ ..++++-.
T Consensus        82 iiIN~tp~g~~~~~~~~~~~~~~~~-~~~~D~vy  114 (171)
T d1p77a1          82 LVINATSAGLSGGTASVDAEILKLG-SAFYDMQY  114 (171)
T ss_dssp             EEEECCCC-------CCCHHHHHHC-SCEEESCC
T ss_pred             eeeecccccccccccchhhhhhccc-ceeeeeec
Confidence            99999885431   11123456675 77777754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.38  E-value=0.004  Score=48.08  Aligned_cols=75  Identities=20%  Similarity=0.310  Sum_probs=55.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      +++|+|.|.+|..+++.+...|. .|++++.++++.+.+++.|...++ .+. .++++..   +..-..+|.++-+++..
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~-gd~-~~~~~l~---~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANA-TEENELL---SLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEE-CCT-TCTTHHH---HHTGGGCSEEEECCCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCccee-eec-ccchhhh---ccCCccccEEEEEcCch
Confidence            57888999999999999999999 999999999999999888865443 333 2244432   22112689888877754


Q ss_pred             H
Q 017335          285 S  285 (373)
Q Consensus       285 ~  285 (373)
                      .
T Consensus        76 ~   76 (134)
T d2hmva1          76 I   76 (134)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.37  E-value=0.005  Score=53.54  Aligned_cols=79  Identities=19%  Similarity=0.221  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC--c--eEE--cCCCCCCccHHHHHHHhc
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--T--DFI--NPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga--~--~vi--~~~~~~~~~~~~~i~~~~  270 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.|.  .  +.+  |-.+  .+++.+.+.+..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence            5889999998 8999999999999999 9999999998876653    2332  1  122  2222  123333333332


Q ss_pred             C--CCccEEEECCCC
Q 017335          271 D--GGADYCFECIGL  283 (373)
Q Consensus       271 ~--~~~d~vid~~g~  283 (373)
                      .  +++|+++++.|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (264)
T d1spxa_          81 GKFGKLDILVNNAGA   95 (264)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHhCCCCEeeccccc
Confidence            2  479999998773

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.36  E-value=0.018  Score=53.12  Aligned_cols=105  Identities=15%  Similarity=0.187  Sum_probs=70.2

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-----------C----CceE-EcCCCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----------G----ITDF-INPATC  257 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-----------g----a~~v-i~~~~~  257 (373)
                      +++..++++|+++|=+|+|. |..+.++|+..|+++|++++.++...+.+++.           |    .... +..+. 
T Consensus       208 Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f-  285 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF-  285 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS-
T ss_pred             HHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeech-
Confidence            67888999999999999987 89999999999977899999999877776431           1    1111 11111 


Q ss_pred             CCccHHHHHHHhcCCCccEEEEC-C-CC---HHHHHHHHHHhccCCceEEEEc
Q 017335          258 GDKTVSQVIKEMTDGGADYCFEC-I-GL---TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       258 ~~~~~~~~i~~~~~~~~d~vid~-~-g~---~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...+....   .. ..+|+|+-. . -.   ...+..+++.|++| |+++..-
T Consensus       286 ~~~~~~d~---~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         286 VDNNRVAE---LI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TTCHHHHH---HG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hhcccccc---cc-ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            11122111   11 157888742 2 12   22466788899997 9998753

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.32  E-value=0.012  Score=50.08  Aligned_cols=96  Identities=15%  Similarity=0.254  Sum_probs=68.0

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CC-ceEEcCCCCCCccHHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GI-TDFINPATCGDKTVSQVIKE  268 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga-~~vi~~~~~~~~~~~~~i~~  268 (373)
                      ++......++++||-+|+|. |..+..+++ .|+ +|++++.+++-.+.+++.    +. -.++..+          +++
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d----------~~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD----------VLE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC----------GGG
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh----------hhh
Confidence            45566778889999999987 888887777 578 899999999888877642    32 2233322          223


Q ss_pred             hcCC-CccEEEECCCC---------HHHHHHHHHHhccCCceEEE
Q 017335          269 MTDG-GADYCFECIGL---------TSVMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       269 ~~~~-~~d~vid~~g~---------~~~~~~~~~~l~~~~G~~v~  303 (373)
                      +... .||+|+...+.         ...+..+.+.|++| |.++.
T Consensus       100 l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            3333 79999875432         13577899999997 98875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.30  E-value=0.00074  Score=57.94  Aligned_cols=98  Identities=16%  Similarity=0.189  Sum_probs=61.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC---ccHHHHHHHhc-CCCccEE
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD---KTVSQVIKEMT-DGGADYC  277 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~---~~~~~~i~~~~-~~~~d~v  277 (373)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.+++++++...     ....+..+....   ....+.+.... .+.+|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457899998 8999999999999999 99999988654211     111111111000   11112222222 2479999


Q ss_pred             EECCCCH-----------H---------------HHHHHHHHhccCCceEEEEccc
Q 017335          278 FECIGLT-----------S---------------VMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       278 id~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      +++.|..           .               ....++..++++ |+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence            9987730           0               234566677887 999998753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0024  Score=54.26  Aligned_cols=107  Identities=12%  Similarity=0.044  Sum_probs=68.7

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-------------EEcCCCCCCcc
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-------------FINPATCGDKT  261 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-------------vi~~~~~~~~~  261 (373)
                      .....+.++.+||.+|+|. |..+..+|+ .|+ +|+++|.+++..+.+++.....             ...... ...+
T Consensus        38 ~~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~  113 (229)
T d2bzga1          38 DTFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSS-GNIS  113 (229)
T ss_dssp             HHHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT-SSEE
T ss_pred             HHhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecC-CcEE
Confidence            3445788999999999987 788888876 699 9999999999888876532111             000000 0000


Q ss_pred             H-HHHHHHhc---CCCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017335          262 V-SQVIKEMT---DGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       262 ~-~~~i~~~~---~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      + ...+.++.   .+.+|+|+++.--        ...+..+.+.|+++ |++++...
T Consensus       114 ~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         114 LYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             EEESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EEEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            0 00111221   2368999987542        33577899999997 98776654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.27  E-value=0.0084  Score=51.78  Aligned_cols=79  Identities=15%  Similarity=0.146  Sum_probs=52.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceE-EcCCCCCCccHHHHHHHhc--CCCcc
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF-INPATCGDKTVSQVIKEMT--DGGAD  275 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~v-i~~~~~~~~~~~~~i~~~~--~~~~d  275 (373)
                      +.+||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.    +.|.+.. +.-+-..++++.+.+.+..  -+++|
T Consensus         2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            35699998 8999999988888999 9999999998876653    3454322 2222211223333333322  24799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +++++.|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99998874

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.0027  Score=52.84  Aligned_cols=97  Identities=13%  Similarity=0.119  Sum_probs=63.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .++|+|+|+ |.+|...+..+...|. +|.++.|++++.......+++ ++..+-   .+. +.+.+.. .++|+||.++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD~---~d~-~~l~~al-~~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDV---LQA-ADVDKTV-AGQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCT---TSH-HHHHHHH-TTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccc-cccccc---cch-hhHHHHh-cCCCEEEEEe
Confidence            468999998 9999999998888999 999999998886554444443 333333   222 2233322 2689999998


Q ss_pred             CCHH----------HHHHHHHHhccCC-ceEEEEcc
Q 017335          282 GLTS----------VMNDAFNSSREGW-GKTVILGV  306 (373)
Q Consensus       282 g~~~----------~~~~~~~~l~~~~-G~~v~~G~  306 (373)
                      |...          ....+++.++..+ .+++.++.
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            7521          2334555665531 36777653

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.23  E-value=0.0028  Score=54.63  Aligned_cols=81  Identities=17%  Similarity=0.220  Sum_probs=54.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCC-c-eEEcCCCCCCcc---HHHHHHHhcCC-Cc
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGI-T-DFINPATCGDKT---VSQVIKEMTDG-GA  274 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~lga-~-~vi~~~~~~~~~---~~~~i~~~~~~-~~  274 (373)
                      .++|||+|+ +++|++.++.+...|+. +|+.+.+++++.+.+++... . +++.-+-...++   +.+.+.+..+. +.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            479999998 89999988887777853 79999999998888876432 1 233222101122   33344433333 69


Q ss_pred             cEEEECCCC
Q 017335          275 DYCFECIGL  283 (373)
Q Consensus       275 d~vid~~g~  283 (373)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.22  E-value=0.004  Score=53.93  Aligned_cols=81  Identities=14%  Similarity=0.097  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--EEcCCCCCC-ccHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGD-KTVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--vi~~~~~~~-~~~~~~i~~~~~--  271 (373)
                      .|++|||+|+ +++|.+.+..+...|+ +|+++.++.++.+.+++    .+..+  .+..+...+ +++.+.+.+...  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4899999998 8999999999999999 78777666555444432    22212  122221111 223333333322  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +++|+++++.|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            379999999885

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.20  E-value=0.005  Score=53.16  Aligned_cols=75  Identities=11%  Similarity=-0.008  Sum_probs=52.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----CceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----ITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      .|+||+|+ +++|++.++.+...|+ +|+.++++.++.+.+++.+    ...+.+.++  .+++.+.+.+.. |++|+++
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~--~~~~~~~~~~~~-G~iDiLV   76 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAY-GQVDVLV   76 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHH-SCCCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH--HHHHHHHHHHHc-CCCCEEE
Confidence            37899998 8999999999999999 9999999888877776533    223333222  233444443333 4799999


Q ss_pred             ECCC
Q 017335          279 ECIG  282 (373)
Q Consensus       279 d~~g  282 (373)
                      ++.|
T Consensus        77 nNAg   80 (252)
T d1zmta1          77 SNDI   80 (252)
T ss_dssp             EECC
T ss_pred             ECCc
Confidence            7655

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.19  E-value=0.01  Score=50.50  Aligned_cols=100  Identities=16%  Similarity=0.136  Sum_probs=66.0

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceEEcCCCCCCccHHHHHHHhcC
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      +...++||++||=+|+|. |..+..+++...-.+|++++.+++..+.+++.    +....+..+...+.       ....
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~-------~~~~  139 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ-------EYAN  139 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG-------GGTT
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc-------cccc
Confidence            456789999999999987 78888888875444999999999888877653    22222322221111       1111


Q ss_pred             C--CccEEEECCCC----HHHHHHHHHHhccCCceEEEE
Q 017335          272 G--GADYCFECIGL----TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~--~~d~vid~~g~----~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .  .+|+++.....    ...+..+.+.|+++ |.++..
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            2  46667654432    22477788899997 988765

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.14  E-value=0.02  Score=47.88  Aligned_cols=101  Identities=16%  Similarity=0.059  Sum_probs=66.8

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      ...++||++||=+|+|. |..+..+++..+-.+|+++|.+++..+.+++    .+....+..+.. ....    ......
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~~~~----~~~~~~  124 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-KPWK----YSGIVE  124 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-CGGG----TTTTCC
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-Cccc----cccccc
Confidence            45799999999999987 7788888888875599999999988777643    343333333220 0100    001112


Q ss_pred             CccEEEECCCC----HHHHHHHHHHhccCCceEEEE
Q 017335          273 GADYCFECIGL----TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       273 ~~d~vid~~g~----~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .+|+++.....    ...+..+.+.|+++ |+++.+
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  159 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  159 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEE
Confidence            67888754431    22467788999997 998765

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.13  E-value=0.0099  Score=49.52  Aligned_cols=94  Identities=16%  Similarity=0.207  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      -++++++||-+|+|. |..+..+++. |. +|+++|.+++..+.+++    .+. ...+..+.   .++     ...++.
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~---~~l-----~~~~~~  102 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKL-----SFEDKT  102 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSC-----CSCTTC
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhcccccccccccccc---ccc-----cccCcC
Confidence            367889999999987 7788888874 77 99999999998877764    332 22232222   111     122237


Q ss_pred             ccEEEECCCC--------HHHHHHHHHHhccCCceEEEE
Q 017335          274 ADYCFECIGL--------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       274 ~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +|+|+-...-        ...+..+.+.|++| |++++.
T Consensus       103 fD~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         103 FDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            9998853221        12577899999997 998754

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.10  E-value=0.004  Score=45.03  Aligned_cols=71  Identities=17%  Similarity=0.180  Sum_probs=48.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .|++|+|+|.|..|+++++++...|+ +|++.|.++.  ..+.++. +....+....   ...   +     ..+|.|+-
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~---~~~---~-----~~~d~vi~   70 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLPE-AVERHTGSLN---DEW---L-----MAADLIVA   70 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSCT-TSCEEESBCC---HHH---H-----HHCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHhh-ccceeecccc---hhh---h-----ccCCEEEE
Confidence            57899999999999999999999999 9999997543  2222222 2333333322   111   1     15789998


Q ss_pred             CCCCHH
Q 017335          280 CIGLTS  285 (373)
Q Consensus       280 ~~g~~~  285 (373)
                      +.|-+.
T Consensus        71 SPGi~~   76 (93)
T d2jfga1          71 SPGIAL   76 (93)
T ss_dssp             CTTSCT
T ss_pred             CCCCCC
Confidence            888655

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.09  E-value=0.036  Score=43.94  Aligned_cols=86  Identities=15%  Similarity=0.224  Sum_probs=57.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+++.++. +.+       +..+.++     ..|+||-|+..+
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~-~~~-------~~~e~~~-----~~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAE-TAS-------TAKAIAE-----QCDVIITMLPNS   67 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECS-------SHHHHHH-----HCSEEEECCSSH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhh-hcc-------cHHHHHh-----CCCeEEEEcCCH
Confidence            47899999999998888888999 999999999999999887763 221       1111121     467777777655


Q ss_pred             HHHHHH-------HHHhccCCceEEEEc
Q 017335          285 SVMNDA-------FNSSREGWGKTVILG  305 (373)
Q Consensus       285 ~~~~~~-------~~~l~~~~G~~v~~G  305 (373)
                      ......       ...++++ ..++.++
T Consensus        68 ~~v~~v~~~~~~~~~~~~~g-~iiid~s   94 (161)
T d1vpda2          68 PHVKEVALGENGIIEGAKPG-TVLIDMS   94 (161)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHhCCcchhhccCCC-CEEEECC
Confidence            534432       3344554 5555554

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.06  E-value=0.0099  Score=52.45  Aligned_cols=98  Identities=17%  Similarity=0.204  Sum_probs=69.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---------C-ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---------I-TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg---------a-~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++-         . .+++.      .|-.+.+.+..
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNAA  151 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTSC
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhcc
Confidence            4557999998866 566668888878779999999999888887642         1 12332      23445555554


Q ss_pred             CCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          271 DGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++.+|+|| |...         +...++.+.+.|+++ |.++.-..
T Consensus       152 ~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  196 (290)
T d1xj5a_         152 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE  196 (290)
T ss_dssp             TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             ccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence            45899888 5543         244688999999997 99987653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.04  E-value=0.016  Score=49.61  Aligned_cols=100  Identities=16%  Similarity=0.186  Sum_probs=61.5

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhc--CCCcc
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGGAD  275 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~~d  275 (373)
                      .|||+|+ +++|++.++.+...|+ +|+.+ .+++++.+.+    ++.|.+. .+..+-...+++.+.+.+..  .+++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6788888 8999999999999999 88876 4565555444    3455432 22222111123333333222  24799


Q ss_pred             EEEECCCCHH-------------------------HHHHHHHHh--ccCCceEEEEcc
Q 017335          276 YCFECIGLTS-------------------------VMNDAFNSS--REGWGKTVILGV  306 (373)
Q Consensus       276 ~vid~~g~~~-------------------------~~~~~~~~l--~~~~G~~v~~G~  306 (373)
                      +++++.|...                         ....+++.|  +.+ |+++.++.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS  138 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIAS  138 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECC
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC-cEEEEEcC
Confidence            9999887411                         344455555  454 99999875

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.049  Score=48.61  Aligned_cols=104  Identities=14%  Similarity=0.142  Sum_probs=70.5

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----------cC----CceEEcCCCCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----------FG----ITDFINPATCG  258 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----------lg----a~~vi~~~~~~  258 (373)
                      +++..+++++++||-+|+|. |..+.++|+..++.++++++.+++..+.+++           +|    .-.++..+- .
T Consensus       143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~-~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-L  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT-T
T ss_pred             HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc-c
Confidence            66788999999999999987 8888999999998789999999987666643           12    122333332 1


Q ss_pred             CccHHHHHHHhcCCCccEEEE-CCC-CH---HHHHHHHHHhccCCceEEEEc
Q 017335          259 DKTVSQVIKEMTDGGADYCFE-CIG-LT---SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       259 ~~~~~~~i~~~~~~~~d~vid-~~g-~~---~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +.++.+.+.     .+|+|+- +.- .+   ..+..+++.|++| |+++..-
T Consensus       221 ~~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             SHHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             ccccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            123322221     3678873 221 22   2456778889997 9998753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.03  E-value=0.028  Score=44.19  Aligned_cols=81  Identities=22%  Similarity=0.198  Sum_probs=55.7

Q ss_pred             EEEEECCChHHHHHHH-HHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          205 TVAIFGLGAVGLAVAE-GARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~-la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +|.++|+|.+|.+.++ +++.-+. +|++.++++++.+.+++ +|.. +.+..+    .       .  ...|+||-|+-
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l~~~~~~~-~~~~~~----~-------v--~~~Div~lavk   66 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVE-TSATLP----E-------L--HSDDVLILAVK   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCE-EESSCC----C-------C--CTTSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHhhhhcccc-cccccc----c-------c--cccceEEEecC
Confidence            5889999999998777 4554435 99999999999888765 5653 333222    1       1  15788888887


Q ss_pred             CHHHHHHHHHHhccCCceEE
Q 017335          283 LTSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       283 ~~~~~~~~~~~l~~~~G~~v  302 (373)
                      . ..+...++-+++. ++++
T Consensus        67 P-~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          67 P-QDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             H-HHHHHHHTTCCCT-TCEE
T ss_pred             H-HHHHHhHHHHhhc-ccEE
Confidence            3 3377777777764 6544

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.99  E-value=0.035  Score=45.98  Aligned_cols=81  Identities=22%  Similarity=0.214  Sum_probs=58.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++.+.+.++......+|++.+ ..+     +       +..-.+|+.+=|
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----~-------~~~~~~DI~iPc   90 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----D-------VLSTPCDVFAPC   90 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----G-------GGGCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----c-------cccccceeeecc
Confidence            368899999999999999999999999 99999999999999888887533 221     1       222378988855


Q ss_pred             CCCHHHHHHHHHHhc
Q 017335          281 IGLTSVMNDAFNSSR  295 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~  295 (373)
                      ......-....+.++
T Consensus        91 A~~~~I~~~~a~~i~  105 (201)
T d1c1da1          91 AMGGVITTEVARTLD  105 (201)
T ss_dssp             SCSCCBCHHHHHHCC
T ss_pred             cccccccHHHHhhhh
Confidence            443332233444443

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.97  E-value=0.0032  Score=55.56  Aligned_cols=104  Identities=14%  Similarity=0.065  Sum_probs=64.6

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceEEcCCCCCCccHHHHHHHhcC
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      +..+.+++.+||-+|+|. |..+..+++. |+ +|+++|.+++-++.+++.    +.............++...-.....
T Consensus        50 ~~l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA  126 (292)
T ss_dssp             HHHHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred             HHhhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCC
Confidence            344456778999999987 7788888875 88 999999999988777542    2110000000000122211122333


Q ss_pred             C-CccEEEECCCC--------------HHHHHHHHHHhccCCceEEE
Q 017335          272 G-GADYCFECIGL--------------TSVMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       272 ~-~~d~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~  303 (373)
                      . .+|.|+.....              ...+..+.+.|++| |.+++
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            3 89999864321              12588999999997 99876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.89  E-value=0.014  Score=50.47  Aligned_cols=105  Identities=16%  Similarity=0.295  Sum_probs=65.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHH-----HcCCceEEcCCCCCCc-cHHHHHHHhcC--
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGK-----KFGITDFINPATCGDK-TVSQVIKEMTD--  271 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~-----~lga~~vi~~~~~~~~-~~~~~i~~~~~--  271 (373)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++ ++.+.++     +.|.......-+..+. ++.+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5889999998 8999999999999999 999999864 4443332     2344332222221222 23233322222  


Q ss_pred             CCccEEEECCCCHH-------------------------HHHHHHHHhcc-CCceEEEEccc
Q 017335          272 GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE  307 (373)
Q Consensus       272 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~G~~  307 (373)
                      +++|+++++.|...                         ....+++.+++ ++|+++.++..
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA  143 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence            47999999988411                         23445555543 23899988753

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.81  E-value=0.0017  Score=55.85  Aligned_cols=75  Identities=16%  Similarity=0.165  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  278 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi  278 (373)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+..    ...|-.+  .+++.+.+.+...  +++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~--~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC--HHHHHHHHHHHHHhcCCceEEE
Confidence            5899999998 8999999999999999 99999998766543211    1222222  1223333333222  3799999


Q ss_pred             ECCCC
Q 017335          279 ECIGL  283 (373)
Q Consensus       279 d~~g~  283 (373)
                      ++.|.
T Consensus        79 nnAG~   83 (237)
T d1uzma1          79 SNAGL   83 (237)
T ss_dssp             EECSC
T ss_pred             eeecc
Confidence            98774

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.75  E-value=0.022  Score=48.62  Aligned_cols=102  Identities=14%  Similarity=0.125  Sum_probs=63.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCC------eEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhc--
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRAS------KIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--  270 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~------~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~--  270 (373)
                      .|||+|+ +++|++.+..+...|++      .|+.+++++++++.+.    +.|... .+..+-...+++.+.+.+..  
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688998 89999998888888883      3889999988876653    345332 22222111123323233222  


Q ss_pred             CCCccEEEECCCCHH-------------------------HHHHHHHHhc--cCCceEEEEccc
Q 017335          271 DGGADYCFECIGLTS-------------------------VMNDAFNSSR--EGWGKTVILGVE  307 (373)
Q Consensus       271 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~~G~~v~~G~~  307 (373)
                      -+.+|+++++.|...                         ....+++.|+  .+ |+++.++..
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-G~Ii~isS~  145 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS-GHIFFITSV  145 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCC-CceEEEech
Confidence            237999999988411                         3444555663  34 899988753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.74  E-value=0.012  Score=50.90  Aligned_cols=81  Identities=10%  Similarity=0.124  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH---HcC-CceEEcCCCCCCccHHHHHHHhcC--C
Q 017335          202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK---KFG-ITDFINPATCGDKTVSQVIKEMTD--G  272 (373)
Q Consensus       202 ~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~---~lg-a~~vi~~~~~~~~~~~~~i~~~~~--~  272 (373)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++   +.+ ...++..+...+.+..+.+.+...  +
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            5899999996 5  699999999999999 9999999875444443   223 222222222112333333333322  4


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      .+|+++.+.|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            79999988774

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=95.56  E-value=0.018  Score=50.20  Aligned_cols=98  Identities=19%  Similarity=0.127  Sum_probs=68.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-----C-----ceEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----I-----TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-----a-----~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....++|||+|+|. |..+..+++..+..+|.+++.+++-.+.++++-     +     -+++..+.      ...+++ 
T Consensus        73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~------~~~l~~-  144 (274)
T d1iy9a_          73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG------FMHIAK-  144 (274)
T ss_dssp             SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS------HHHHHT-
T ss_pred             cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechH------HHHHhh-
Confidence            34568999999876 667778888877779999999999888887642     1     12333332      333433 


Q ss_pred             cCCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++..+|+|+ |...         +...++.+.+.|+++ |.++.-..
T Consensus       145 ~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~~  190 (274)
T d1iy9a_         145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQTD  190 (274)
T ss_dssp             CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEECC
T ss_pred             cCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEecC
Confidence            334899998 5433         344688899999997 99987653

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.022  Score=50.43  Aligned_cols=96  Identities=19%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH---HHcCC---ceEEcCCCCCCccHHHHHHHh
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG---KKFGI---TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~---~~lga---~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      +.....++++||.+|+|. |.+++.+|+ .|+++|++++.++.-....   ++.+.   -.+++.+.   .++     ..
T Consensus        29 ~~~~~~~~~~VLDiGcG~-G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~---~~l-----~~   98 (311)
T d2fyta1          29 QNPHIFKDKVVLDVGCGT-GILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKI---EEV-----HL   98 (311)
T ss_dssp             HCGGGTTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT---TTS-----CC
T ss_pred             hccccCCcCEEEEECCCC-CHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeH---HHh-----cC
Confidence            334567899999999974 777776666 5777999999887543222   23332   23343332   111     11


Q ss_pred             cCCCccEEEE-CCCC----H----HHHHHHHHHhccCCceEE
Q 017335          270 TDGGADYCFE-CIGL----T----SVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       270 ~~~~~d~vid-~~g~----~----~~~~~~~~~l~~~~G~~v  302 (373)
                      ....+|+|+. ..+.    +    ..+...-+.|+++ |+++
T Consensus        99 ~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~-G~ii  139 (311)
T d2fyta1          99 PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG-GSVY  139 (311)
T ss_dssp             SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE-EEEE
T ss_pred             ccccceEEEEeeeeeecccccccHHHHHHHHhcCCCC-cEEe
Confidence            1238999984 3321    1    2233334578997 9876

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.51  E-value=0.025  Score=48.39  Aligned_cols=82  Identities=13%  Similarity=0.180  Sum_probs=53.5

Q ss_pred             CCCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC--
Q 017335          201 EVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--  271 (373)
Q Consensus       201 ~~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~--  271 (373)
                      -.|+++||+|+ |  ++|.+.+..+...|+ +|+.++++++..+.+.+    .+....+..+.....+..+...+...  
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            46899999987 5  688999999999999 89999998776555433    44433333333112233333333332  


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +..|+.+++.+.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            278999987654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.48  E-value=0.015  Score=52.14  Aligned_cols=99  Identities=22%  Similarity=0.247  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhc-
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT-  270 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~-  270 (373)
                      .+++|++||=+++|. |..++.+++. |+.+|++++.+++..+.+++    .|..   +++.      .+..+.+..+. 
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~------~d~~~~~~~~~~  213 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV------GSAFEEMEKLQK  213 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHHHH
T ss_pred             hcCCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee------chhhhhhHHHHh
Confidence            468899999987743 3344445544 66699999999998888753    4542   2333      23444443332 


Q ss_pred             CC-CccEEEE-CCCC--------------HHHHHHHHHHhccCCceEEEEcc
Q 017335          271 DG-GADYCFE-CIGL--------------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~-~~d~vid-~~g~--------------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+ .||+|+- ....              ...+..+++.|++| |.++.+..
T Consensus       214 ~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~  264 (324)
T d2as0a2         214 KGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSC  264 (324)
T ss_dssp             TTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEEC
T ss_pred             ccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            23 8999994 3221              12467788899997 99988754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.44  E-value=0.021  Score=48.83  Aligned_cols=79  Identities=14%  Similarity=0.153  Sum_probs=49.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHH---HCCCCeEEEEcCChhHHHHHHHc---CC-ceEEcCCCCCCccH---HHHHHHhcC-
Q 017335          204 STVAIFGL-GAVGLAVAEGAR---LNRASKIIGVDINPEKFEIGKKF---GI-TDFINPATCGDKTV---SQVIKEMTD-  271 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~---~~G~~~Vi~~~~~~~~~~~~~~l---ga-~~vi~~~~~~~~~~---~~~i~~~~~-  271 (373)
                      ++|||+|+ +++|++.++.+-   ..|+ +|+.+++++++.+.++++   +. -+++.-+-...+++   .+.+.+... 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            58999998 899999776553   3577 999999999876655432   22 22222222112333   333333333 


Q ss_pred             CCccEEEECCCC
Q 017335          272 GGADYCFECIGL  283 (373)
Q Consensus       272 ~~~d~vid~~g~  283 (373)
                      +.+|+++++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            379999998763

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.027  Score=47.97  Aligned_cols=46  Identities=30%  Similarity=0.260  Sum_probs=39.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI  248 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga  248 (373)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC
Confidence            6899999998 8999999999999999 999999998877665 45654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.36  E-value=0.093  Score=41.48  Aligned_cols=45  Identities=18%  Similarity=0.172  Sum_probs=38.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  249 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~  249 (373)
                      .+|.++|.|.+|...+.-+...|+ +|.+.++++++.+.+.+.++.
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGAS   46 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcc
Confidence            368899999999988887777899 999999999999888877653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.32  E-value=0.05  Score=42.71  Aligned_cols=85  Identities=12%  Similarity=0.159  Sum_probs=61.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|.++|+|.+|.+.+.-+...|. ++++.+++.++.+.+ +++|....        .+..+.+.     ..|+||-|+-.
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~--------~~~~~~~~-----~~dvIilavkp   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA--------MSHQDLID-----QVDLVILGIKP   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC--------SSHHHHHH-----TCSEEEECSCG
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee--------chhhhhhh-----ccceeeeecch
Confidence            57889999999988876666787 999999998887776 56775422        12222221     68999999864


Q ss_pred             HHHHHHHHHHhccCCceEEEEc
Q 017335          284 TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       284 ~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .. +...++.++++ ..++.+.
T Consensus        68 ~~-~~~vl~~l~~~-~~iis~~   87 (152)
T d2ahra2          68 QL-FETVLKPLHFK-QPIISMA   87 (152)
T ss_dssp             GG-HHHHHTTSCCC-SCEEECC
T ss_pred             Hh-HHHHhhhcccc-eeEeccc
Confidence            44 78888888885 7777553

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.31  E-value=0.0094  Score=45.32  Aligned_cols=39  Identities=31%  Similarity=0.469  Sum_probs=34.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .++++++|+|+|+|.+|.-++..++.+|. +|..+++++.
T Consensus        26 ~~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          26 GLRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             HCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            35678999999999999999999999999 9999987654

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.30  E-value=0.097  Score=41.34  Aligned_cols=93  Identities=15%  Similarity=0.269  Sum_probs=57.6

Q ss_pred             CEEEEECCChHHH-HHHHHHHHCCCCeEEEEc-CChh--HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEE
Q 017335          204 STVAIFGLGAVGL-AVAEGARLNRASKIIGVD-INPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF  278 (373)
Q Consensus       204 ~~VlI~G~G~vG~-~a~~la~~~G~~~Vi~~~-~~~~--~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vi  278 (373)
                      -+|.|+|+|.+|. ..+++++....-+++++. ++.+  +..+++++|.....        +..+.+.+..+- ++|+||
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceeeeeecccccccCEEE
Confidence            3789999999987 466787766543677764 4443  45677888864321        223344443332 799999


Q ss_pred             ECCCCHHHHHHH--HHHhccCCceEEEEc
Q 017335          279 ECIGLTSVMNDA--FNSSREGWGKTVILG  305 (373)
Q Consensus       279 d~~g~~~~~~~~--~~~l~~~~G~~v~~G  305 (373)
                      +++......+..  .+.++.| -.+++..
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G-~~VID~s  104 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPG-IRLIDLT  104 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred             EcCCchhHHHhHHHHHHHHcC-CEEEEcc
Confidence            998854434433  4556664 5566554

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.17  E-value=0.055  Score=44.15  Aligned_cols=98  Identities=12%  Similarity=0.160  Sum_probs=64.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc----eEEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT----DFINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~----~vi~~~~~~~~~~~~~  265 (373)
                      +.+.....++++||-+|+|. |..++.+++ .+. +|++++.++...+.+++    .+..    .++..+.      .  
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~------~--  112 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL------Y--  112 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST------T--
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcch------h--
Confidence            45667889999999999876 666666665 455 99999999988777753    2321    2332222      1  


Q ss_pred             HHHhcCCCccEEEECC----CC---HHHHHHHHHHhccCCceEEEE
Q 017335          266 IKEMTDGGADYCFECI----GL---TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       266 i~~~~~~~~d~vid~~----g~---~~~~~~~~~~l~~~~G~~v~~  304 (373)
                       ....++.+|+|+-..    +.   ...+..+.+.|+++ |+++..
T Consensus       113 -~~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         113 -ENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             -TTCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             -hhhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence             112234799999532    21   22467788999997 987654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.12  E-value=0.14  Score=40.46  Aligned_cols=132  Identities=11%  Similarity=0.030  Sum_probs=80.6

Q ss_pred             EEEEECCChHHHH-HHHHHHHC-CCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          205 TVAIFGLGAVGLA-VAEGARLN-RASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       205 ~VlI~G~G~vG~~-a~~la~~~-G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      +|.|+|+|.+|.- .+...+.. +. +++++++++++.+.+ ++++...+++.-+    +       +....+|+|+-|+
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~-------ll~~~iD~V~I~t   70 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCTDYR----D-------VLQYGVDAVMIHA   70 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCSSTT----G-------GGGGCCSEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccccHH----H-------hcccccceecccc
Confidence            6889999999964 55566555 55 777888888777665 4577654442211    1       2222699999999


Q ss_pred             CCHHHHHHHHHHhccCCceEEEEcccCCCCcc-ccCHHHHhh--CcEEEEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      ....-.+.+..++..|  +=+++.-+.....- ......+..  +..+.-.+  . +....+.++.+.+..|++.
T Consensus        71 p~~~H~~~~~~al~~g--k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~--~-r~~~~~~~~~~~~~~G~ig  140 (167)
T d1xeaa1          71 ATDVHSTLAAFFLHLG--IPTFVDKPLAASAQECENLYELAEKHHQPLYVGF--N-GFDAMVQDWLQVAAAGKLP  140 (167)
T ss_dssp             CGGGHHHHHHHHHHTT--CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC--G-THHHHHHHHHHHHHHTCCC
T ss_pred             cccccccccccccccc--cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe--C-cCCHHHHHHHHHhhcCCCC
Confidence            9877788888888874  44556442221100 112222222  44443222  1 2346678888888889886

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=95.11  E-value=0.05  Score=45.42  Aligned_cols=93  Identities=17%  Similarity=0.223  Sum_probs=63.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHH---CCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARL---NRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~---~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ++++.+||-+|+|. |..+..+++.   .++ +|+++|.+++-++.+++    .+..   +..+.+.          .+.
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~----------~~~  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDI----------RHV  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCT----------TTC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchh----------hcc
Confidence            78999999999976 7777777775   467 99999999998888864    2221   2222221          122


Q ss_pred             cCCCccEEEECCC--------CHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCFECIG--------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ....+|+++-...        ....+..+.+.|++| |.+++.-
T Consensus       105 ~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         105 EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            2236777765322        124688999999997 9998764

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.08  E-value=0.022  Score=48.36  Aligned_cols=89  Identities=15%  Similarity=0.179  Sum_probs=60.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHHHhc-CCCc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMT-DGGA  274 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~~~~-~~~~  274 (373)
                      .++++||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++    .|. -.++..+-          +++. ++.|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~----------~~~~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI----------SNLNINRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG----------GGCCCSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeeccch----------hhhcccccc
Confidence            4467999999986 777777776 477 99999999998777754    332 23443221          2232 3489


Q ss_pred             cEEEECCCC------H----HHHHHHHHHhccCCceEEE
Q 017335          275 DYCFECIGL------T----SVMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       275 d~vid~~g~------~----~~~~~~~~~l~~~~G~~v~  303 (373)
                      |+|+...+.      .    ..+..+.+.|++| |.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            999964331      1    2577888899997 99874

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.06  E-value=0.043  Score=45.26  Aligned_cols=87  Identities=16%  Similarity=0.105  Sum_probs=59.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.++........  .+..    .     .++.+.+.     ..|+|+.+.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~-----~~l~~~l~-----~sDii~~~~  104 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----V-----DSLDDLYK-----QADVISLHV  104 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----C-----SCHHHHHH-----HCSEEEECS
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----e-----cccccccc-----ccccccccC
Confidence            38899999999999999999999999 999998765433222  1211    1     23333332     478888776


Q ss_pred             CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....     .-...++.|+++ ..++.++.
T Consensus       105 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  133 (197)
T d1j4aa1         105 PDVPANVHMINDESIAKMKQD-VVIVNVSR  133 (197)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CccccccccccHHHHhhhCCc-cEEEecCc
Confidence            5322     124667888996 88888764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.04  E-value=0.027  Score=46.20  Aligned_cols=95  Identities=19%  Similarity=0.243  Sum_probs=62.0

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--EEcCCCCCCccHHHHHHHhc-
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKEMT-  270 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--vi~~~~~~~~~~~~~i~~~~-  270 (373)
                      ....++.+||-+|+|. |..+..+++ .|+ +|++++.+++..+.+++    .|.+.  +...+-          .+.. 
T Consensus        26 ~~~~~~grvLDiGcG~-G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~----------~~~~~   92 (198)
T d2i6ga1          26 AKVVAPGRTLDLGCGN-GRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL----------NTLTF   92 (198)
T ss_dssp             HTTSCSCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT----------TTCCC
T ss_pred             cccCCCCcEEEECCCC-CHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheec----------ccccc
Confidence            3433445899999974 888887776 588 99999999988877653    34432  221111          1111 


Q ss_pred             CCCccEEEECC-----CC---HHHHHHHHHHhccCCceEEEEcc
Q 017335          271 DGGADYCFECI-----GL---TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~~~d~vid~~-----g~---~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++.||+|+...     ..   ...+..+.++|+++ |.++....
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          93 DGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             CCCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             cccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            23799999532     11   23577888899997 99887644

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.00  E-value=0.045  Score=46.20  Aligned_cols=104  Identities=20%  Similarity=0.250  Sum_probs=69.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh----
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM----  269 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~----  269 (373)
                      .....++||-+|.+. |..++.+|+.+.- .+|+.++.+++..+.+++    .|..+-+.-..   .+..+.+.++    
T Consensus        56 ~~~~~k~iLEiGT~~-GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~---g~a~~~L~~l~~~~  131 (227)
T d1susa1          56 KLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMIKDE  131 (227)
T ss_dssp             HHHTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHCG
T ss_pred             HhcCCCcEEEecchh-hhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee---hHHHHHHHHHHhcc
Confidence            334568999999865 8888888887742 399999999988777754    56533222221   2333344443    


Q ss_pred             -cCCCccEEE-ECCCC--HHHHHHHHHHhccCCceEEEEccc
Q 017335          270 -TDGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       270 -~~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                       ..+.||+|| |+--.  ...++.+++.|++| |.++.=...
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DNvl  172 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNTL  172 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEETTT
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEccCC
Confidence             234799999 54332  23588999999997 998876553

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.94  E-value=0.15  Score=40.88  Aligned_cols=100  Identities=16%  Similarity=0.170  Sum_probs=64.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CCeEEEEcC-C-hhHHHHHHHcCCceEEcCCCCCCccHHH-------HHHHhcCCCc
Q 017335          205 TVAIFGLGAVGLAVAEGARLNR-ASKIIGVDI-N-PEKFEIGKKFGITDFINPATCGDKTVSQ-------VIKEMTDGGA  274 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~-~-~~~~~~~~~lga~~vi~~~~~~~~~~~~-------~i~~~~~~~~  274 (373)
                      +|.|.|.|-+|...+..+.... . +++++-. + .+....+.+.+.+......+ ....+.+       .+.+. ..++
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~v   80 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEE-FIPRFEKEGFEVAGTLNDL-LEKV   80 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGG-GHHHHHHHTCCCSCBHHHH-HTTC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeeccccc-ceeeecccCccccchhhhh-hccC
Confidence            6899999999999888876543 5 6666543 2 34455566666543321111 0011111       00111 1279


Q ss_pred             cEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       275 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      |+|+||+|.-.+.+.+-..+..| .+.|..+.+.
T Consensus        81 DvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~  113 (172)
T d2czca2          81 DIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEK  113 (172)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSC
T ss_pred             CEEEECCCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            99999999888888999999997 9999988743

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.017  Score=43.19  Aligned_cols=39  Identities=23%  Similarity=0.352  Sum_probs=33.5

Q ss_pred             CCCC-CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          200 VEVG-STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       200 ~~~~-~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      +.++ .+|.|+|+|.+|++.++.|+.+|+ ++++++.+++.
T Consensus         7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2           7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            3444 469999999999999999999999 99999977653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.89  E-value=0.16  Score=39.37  Aligned_cols=94  Identities=12%  Similarity=0.006  Sum_probs=64.3

Q ss_pred             CEEEEEC-CChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC--CccEEEEC
Q 017335          204 STVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFEC  280 (373)
Q Consensus       204 ~~VlI~G-~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~--~~d~vid~  280 (373)
                      ++|.|+| .|.+|...+..++..|+ .|.+.+++++........+++.++..-.  .......+.+..+.  .=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP--INLTLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc--hhhheeeeecccccccCCceEEEe
Confidence            5899999 59999999999999999 9999999887776666667777765554  23444455554433  22577888


Q ss_pred             CCCHHHHHHHHHHhccCCceEE
Q 017335          281 IGLTSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v  302 (373)
                      .+........+....+  .+++
T Consensus        87 ~Svk~~~~~~~~~~~~--~~~v  106 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT--GAVL  106 (152)
T ss_dssp             CSCCHHHHHHHHHHCS--SEEE
T ss_pred             cccCHHHHHHHHHHcc--CCEE
Confidence            8765434444444333  4554

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.84  E-value=0.039  Score=47.68  Aligned_cols=98  Identities=13%  Similarity=0.126  Sum_probs=68.0

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcCCC
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      ......++.+||-+|+|. |..+..+++.. +. +++++|.+++..+.+++.... ..+..+.   .++     .+.++.
T Consensus        78 ~~~~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~---~~l-----~~~~~s  147 (268)
T d1p91a_          78 RERLDDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTS  147 (268)
T ss_dssp             HHHSCTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTC
T ss_pred             HHhcCCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeeh---hhc-----cCCCCC
Confidence            334456788999999977 77777888775 45 999999999998888764422 2222222   111     122337


Q ss_pred             ccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       274 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +|+|+....-.. +..+.+.|++| |.++...
T Consensus       148 fD~v~~~~~~~~-~~e~~rvLkpg-G~l~~~~  177 (268)
T d1p91a_         148 MDAIIRIYAPCK-AEELARVVKPG-GWVITAT  177 (268)
T ss_dssp             EEEEEEESCCCC-HHHHHHHEEEE-EEEEEEE
T ss_pred             EEEEeecCCHHH-HHHHHHHhCCC-cEEEEEe
Confidence            999996555444 78899999997 9988764

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.78  E-value=0.032  Score=48.17  Aligned_cols=95  Identities=15%  Similarity=0.147  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .+++|++||-+|+|. |..++.+|+.-+. +|++++.+++..+.+++    .|.   -++++.+.   .       +...
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~---~-------~~~~  171 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---R-------DFPG  171 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---T-------TCCC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch---H-------Hhcc
Confidence            478999999998754 5556667776445 99999999998888753    343   24554443   2       2233


Q ss_pred             C-CccEEE-ECC-CCHHHHHHHHHHhccCCceEEEEcc
Q 017335          272 G-GADYCF-ECI-GLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       272 ~-~~d~vi-d~~-g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      . .+|.|+ +-. .+...+..+++.+++| |.+.....
T Consensus       172 ~~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~~  208 (260)
T d2frna1         172 ENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHNT  208 (260)
T ss_dssp             CSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEec
Confidence            3 688666 433 3445678899999997 98765543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.75  E-value=0.044  Score=45.24  Aligned_cols=72  Identities=15%  Similarity=0.051  Sum_probs=47.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+|||+|+ |.+|...+..+...|.+ +|+.+.+++++...+.. +.. ++..+.   .+. +.+.+.. .++|.|+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~---~~~-~~~~~~~-~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDI---TDA-DSINPAF-QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEECCT---TSH-HHHHHHH-TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEEeee---ccc-ccccccc-ccceeeEEEE
Confidence            58999998 99999999999888853 67778888877655432 233 332222   112 1222222 2689999886


Q ss_pred             C
Q 017335          282 G  282 (373)
Q Consensus       282 g  282 (373)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.73  E-value=0.043  Score=48.64  Aligned_cols=96  Identities=19%  Similarity=0.194  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC------C-----ceEEcCCCCCCccHHHHHHHh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG------I-----TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg------a-----~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ...++|||+|+|. |..+-++++.....+|.+++.+++-.+.+++.-      +     -+++.      .+..+.+++ 
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~-  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER-  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH-
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhh-
Confidence            4567999998876 666677777766559999999999888776531      1     12332      234444543 


Q ss_pred             cCCCccEEE-ECC---C---------CHHHHHHHHHHhccCCceEEEEc
Q 017335          270 TDGGADYCF-ECI---G---------LTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       270 ~~~~~d~vi-d~~---g---------~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      +++.+|+|| |..   +         +...+..+.+.|+++ |.++.-.
T Consensus       148 ~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~  195 (312)
T d1uira_         148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT  195 (312)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence            344899998 542   2         134578899999997 9987653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.72  E-value=0.1  Score=41.82  Aligned_cols=44  Identities=11%  Similarity=0.072  Sum_probs=38.0

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  247 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg  247 (373)
                      ..+|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.+
T Consensus         2 ~~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~   45 (176)
T d2pgda2           2 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANE   45 (176)
T ss_dssp             CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTT
T ss_pred             CCcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhc
Confidence            3578899999999998888888899 9999999999988876654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.72  E-value=0.027  Score=42.33  Aligned_cols=40  Identities=8%  Similarity=0.062  Sum_probs=34.6

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ...++..++|+|+|+|.+|+-++..++.+|. +|..+.+.+
T Consensus        16 ~~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          16 FFNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             HTTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             HhccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            3455667899999999999999999999999 999999764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.67  E-value=0.4  Score=38.25  Aligned_cols=137  Identities=12%  Similarity=0.069  Sum_probs=80.0

Q ss_pred             EEEEECCChHHHH-HHHHHHHCCCC-eEEE-EcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          205 TVAIFGLGAVGLA-VAEGARLNRAS-KIIG-VDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       205 ~VlI~G~G~vG~~-a~~la~~~G~~-~Vi~-~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      +|.|+|.|.+|.- .+...+..+-. ++++ .++++++.+.+ ++++...++       .++.+.+.   ...+|+|+-|
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~-------~~~~ell~---~~~id~v~I~   74 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF-------DSYEELLE---SGLVDAVDLT   74 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE-------SCHHHHHH---SSCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee-------eeeecccc---ccccceeecc
Confidence            6889999999964 56666654421 5664 56677766654 557766555       23333332   2379999998


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh--CcEE-EEeecCCCCchhHHHHHHHHHHcCCCC
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSV-CGTYFGGLKPRSDIATLAQKYLDKVHL  353 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~--~~~i-~g~~~~~~~~~~~~~~~~~~~~~g~i~  353 (373)
                      +......+.+..++..  |+=+++.-+.....-. .....+.+  +..+ .+...........+.++.+++++|++-
T Consensus        75 tp~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          75 LPVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred             cccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence            8877667788888877  5556665422211111 01122222  3333 322111111236688899999999874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.57  E-value=0.03  Score=49.95  Aligned_cols=46  Identities=26%  Similarity=0.199  Sum_probs=39.2

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       199 ~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      -+.+|++|||+|+ |-+|...+..+...|+ +|+++.++.++.+.+++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~   53 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQK   53 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHH
Confidence            3678999999998 9999999988888899 99999998877766543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.55  E-value=0.088  Score=45.79  Aligned_cols=80  Identities=18%  Similarity=0.200  Sum_probs=45.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCC--eEEEEcCChhHHHH----HHHc---CCc-eEEcCCCCCCccHHHHHHHhcCC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRAS--KIIGVDINPEKFEI----GKKF---GIT-DFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~--~Vi~~~~~~~~~~~----~~~l---ga~-~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +.|||+|+ +++|.+.+..+...|++  .|+.+.++.++.+.    ++++   +.. ..+.-+-...+++.+.+.+...+
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            34677898 89999999888888883  24444554443332    2333   222 22222221123344444444445


Q ss_pred             CccEEEECCCC
Q 017335          273 GADYCFECIGL  283 (373)
Q Consensus       273 ~~d~vid~~g~  283 (373)
                      ..|+++++.|.
T Consensus        83 ~idilvnnag~   93 (285)
T d1jtva_          83 RVDVLVCNAGL   93 (285)
T ss_dssp             CCSEEEECCCC
T ss_pred             chhhhhhcccc
Confidence            89999998774

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.52  E-value=0.038  Score=49.03  Aligned_cols=93  Identities=18%  Similarity=0.183  Sum_probs=56.1

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH---HHHcCC---ceEEcCCCCCCccHHHHHHHhcCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI---GKKFGI---TDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~---~~~lga---~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      .+.+|++||-+|+|. |.+++.+|+ .|+++|++++.++.-...   +++.+.   -.+++.+.   .++     ....+
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~---~~~-----~~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV---EEV-----ELPVE   99 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT---TTC-----CCSSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH---HHc-----ccccc
Confidence            456899999999976 777776666 687689999987642221   223332   22333332   111     11123


Q ss_pred             CccEEEE-CCCC--------HHHHHHHHHHhccCCceEE
Q 017335          273 GADYCFE-CIGL--------TSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       273 ~~d~vid-~~g~--------~~~~~~~~~~l~~~~G~~v  302 (373)
                      .+|+|+. ..+.        +..+...-+.|+++ |+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            7999974 2321        23455666899997 9875

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.45  E-value=0.062  Score=47.80  Aligned_cols=94  Identities=20%  Similarity=0.260  Sum_probs=55.4

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCC---ceEEcCCCCCCccHHHHHHHh
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGI---TDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga---~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      .....+|++||-+|+|. |.++..+|+ .|+++|++++.++ ....+    ++.+.   ..++..+.   .++     .+
T Consensus        33 ~~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~---~~l-----~~  101 (328)
T d1g6q1_          33 NKDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL---EDV-----HL  101 (328)
T ss_dssp             HHHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTS-----CC
T ss_pred             ccccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh---hhc-----cC
Confidence            34456899999999975 666655554 6777999999875 33333    33442   12343332   111     12


Q ss_pred             cCCCccEEEEC-CC----C----HHHHHHHHHHhccCCceEE
Q 017335          270 TDGGADYCFEC-IG----L----TSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       270 ~~~~~d~vid~-~g----~----~~~~~~~~~~l~~~~G~~v  302 (373)
                      .+..+|+|+.. .+    .    ...+...-+.|+++ |+++
T Consensus       102 ~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         102 PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             cccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            22379999852 22    1    22344455789997 9874

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.074  Score=46.44  Aligned_cols=98  Identities=16%  Similarity=0.159  Sum_probs=66.7

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----------CceEEcCCCCCCccHHHHHHHh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----------ITDFINPATCGDKTVSQVIKEM  269 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----------a~~vi~~~~~~~~~~~~~i~~~  269 (373)
                      ....++|||+|+|. |..+-.+++.-+..+|.+++.+++-.+.+++.-          -.+++..      |..+.+++ 
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~------Da~~~l~~-  147 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG------DGFEFMKQ-  147 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES------CHHHHHHT-
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEc------cHHHHHhc-
Confidence            44568999998876 666777888777669999999999888887632          1123322      33344443 


Q ss_pred             cCCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          270 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       270 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+.+|+|+ |...         +...++.+.+.|+++ |.++.-..
T Consensus       148 ~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  193 (285)
T d2o07a1         148 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQGE  193 (285)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEecc
Confidence            344899999 5433         122477888999997 99887653

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.41  E-value=0.015  Score=40.39  Aligned_cols=36  Identities=17%  Similarity=0.285  Sum_probs=31.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF  240 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~  240 (373)
                      ++|.|+|+|.+|++.++.++.+|+ ++++++.+++..
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~p   37 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCGG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCCc
Confidence            479999999999999999999999 999999765443

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.36  E-value=0.071  Score=46.33  Aligned_cols=96  Identities=18%  Similarity=0.190  Sum_probs=63.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C---------------ceEEcCCCCCCccHH
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I---------------TDFINPATCGDKTVS  263 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a---------------~~vi~~~~~~~~~~~  263 (373)
                      ....++|||+|+|. |..+-.+++. +..+|.+++.+++-.+.++++- .               -+++..      |..
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~------Da~  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG------DGF  141 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES------CHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC------hHH
Confidence            35568999998865 4444555664 4458999999999888887632 1               123332      333


Q ss_pred             HHHHHhcCCCccEEE-ECCCC---------HHHHHHHHHHhccCCceEEEEcc
Q 017335          264 QVIKEMTDGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       264 ~~i~~~~~~~~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +.+++  .+++|+|| |....         ...+..+.+.|+++ |.++.-+.
T Consensus       142 ~~l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~~  191 (276)
T d1mjfa_         142 EFIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQAG  191 (276)
T ss_dssp             HHHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             HHHhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEecC
Confidence            34433  34899998 55442         33578899999997 99887543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.33  E-value=0.084  Score=46.17  Aligned_cols=74  Identities=20%  Similarity=0.267  Sum_probs=46.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC--Chh---HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccE
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI--NPE---KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY  276 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~--~~~---~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~  276 (373)
                      .+|||+|+ |-+|...+..+...|+ +|+++++  ...   +...+.+.+.-+++..+- .+.+   .+.+...+ ++|+
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di-~~~~---~l~~~~~~~~~d~   75 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI-RNKN---DVTRLITKYMPDS   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT-TCHH---HHHHHHHHHCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEccc-CCHH---HHHHHHHhcCCce
Confidence            37999998 9999999999988899 9999863  122   233334444334443332 1122   23333333 7899


Q ss_pred             EEECCC
Q 017335          277 CFECIG  282 (373)
Q Consensus       277 vid~~g  282 (373)
                      ||.+..
T Consensus        76 Vih~aa   81 (338)
T d1orra_          76 CFHLAG   81 (338)
T ss_dssp             EEECCC
T ss_pred             EEeecc
Confidence            998875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.32  E-value=0.06  Score=46.04  Aligned_cols=82  Identities=11%  Similarity=0.154  Sum_probs=52.5

Q ss_pred             CCCCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHH-HHH-HHcCCce---EEcCCCC-CCccHHHHHHHhc
Q 017335          200 VEVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKF-EIG-KKFGITD---FINPATC-GDKTVSQVIKEMT  270 (373)
Q Consensus       200 ~~~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~-~~~-~~lga~~---vi~~~~~-~~~~~~~~i~~~~  270 (373)
                      +-.|+++||+|+ |  ++|.+.++.+...|+ +|+.+.++.++. +.+ ++++...   ..|-.+. ...+..+.+.+..
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            346899999995 4  599999999999999 899999887765 323 4455322   1222210 0012334444433


Q ss_pred             CC--CccEEEECCC
Q 017335          271 DG--GADYCFECIG  282 (373)
Q Consensus       271 ~~--~~d~vid~~g  282 (373)
                      ..  ..|+++++.|
T Consensus        82 ~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          82 GAGNKLDGVVHSIG   95 (268)
T ss_dssp             CTTCCEEEEEECCC
T ss_pred             ccCCCcceeeeccc
Confidence            32  6899999887

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.27  E-value=0.019  Score=46.60  Aligned_cols=36  Identities=17%  Similarity=0.146  Sum_probs=31.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      +++|+|+|+|+.|+.++..++..|++.|.++++++.
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999999999999999999856888887654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.27  E-value=0.19  Score=39.22  Aligned_cols=97  Identities=18%  Similarity=0.231  Sum_probs=62.6

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHC--CCCeEEEEcCChhH---HHHHHHcCCceEEcCCCCCCcc--------------HH
Q 017335          204 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEK---FEIGKKFGITDFINPATCGDKT--------------VS  263 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~--G~~~Vi~~~~~~~~---~~~~~~lga~~vi~~~~~~~~~--------------~~  263 (373)
                      ++|.|+|+ |++|..++.+.+..  .+ +|+++.....-   .+.++++.+..+.-.++.....              ..
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            78999999 99999999999875  46 78877655432   3334667777665444300000              11


Q ss_pred             HHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEE
Q 017335          264 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTV  302 (373)
Q Consensus       264 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v  302 (373)
                      +.+.+.....+|+++.++.+...+.-.+.+++.+ -++.
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g-k~ia  119 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG-KTVA  119 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT-SEEE
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcC-CEEE
Confidence            1122222226899998877777788888888884 5443

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.22  E-value=0.036  Score=48.76  Aligned_cols=97  Identities=13%  Similarity=0.174  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC----------ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----------TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga----------~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++..          -+++..      |..+.+++ +
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~------Da~~~l~~-~  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIA------NGAEYVRK-F  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES------CHHHHGGG-C
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhh------hHHHHHhc-C
Confidence            3457999998866 5566778887776699999999998888776321          123322      33333433 3


Q ss_pred             CCCccEEE-ECCC----------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          271 DGGADYCF-ECIG----------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~~~d~vi-d~~g----------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++.+|+|| |...          +...+..+.+.|+++ |.++.-..
T Consensus       160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            34899999 5432          133577899999997 99887654

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.16  E-value=0.16  Score=44.79  Aligned_cols=97  Identities=19%  Similarity=0.150  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC----------ceEEcCCCCCCccHHHHHHHhc
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----------TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga----------~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-.          .+++.      .|..+.+++ +
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i------~Da~~~l~~-~  176 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN-H  176 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-C
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE------chHHHHHHh-C
Confidence            4567999999876 5566678887776699999999998888877421          12222      234445544 4


Q ss_pred             CCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEcc
Q 017335          271 DGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +..+|+|| |...         +...+..+.+.|+++ |.++.-+.
T Consensus       177 ~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         177 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            45899999 4322         122467788899997 99988754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.03  E-value=0.095  Score=42.83  Aligned_cols=89  Identities=17%  Similarity=0.162  Sum_probs=59.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      |.++.|+|.|.+|...+++++..|. +|++.++...........+...   .     .++.+.+.     ..|+|..+..
T Consensus        47 g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~-----~~l~~ll~-----~sD~v~l~~p  112 (191)
T d1gdha1          47 NKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H-----DSLDSLLS-----VSQFFSLNAP  112 (191)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C-----SSHHHHHH-----HCSEEEECCC
T ss_pred             ccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c-----CCHHHHHh-----hCCeEEecCC
Confidence            7899999999999999999999999 9999997655443333333211   1     22333222     4678876554


Q ss_pred             CHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          283 LTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       283 ~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ...     .=...++.|+++ ..+|.++.
T Consensus       113 lt~~T~~li~~~~l~~mk~~-a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQG-AIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCc-cEEEecCC
Confidence            211     123667788886 87777764

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.02  E-value=0.064  Score=44.94  Aligned_cols=107  Identities=16%  Similarity=0.175  Sum_probs=69.0

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh--
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM--  269 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~--  269 (373)
                      ..+....++||-+|.+. |..++.+|+.+.. .+|+.++.+++..+.+++    .|....+....   .+..+.+.++  
T Consensus        54 L~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~---Gda~e~l~~~~~  129 (219)
T d2avda1          54 LARLIQAKKALDLGTFT-GYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDELLA  129 (219)
T ss_dssp             HHHHTTCCEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHH
T ss_pred             HHHccCCCeEEEEechh-hHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEE---eehhhcchhhhh
Confidence            34455678999999866 7788888887641 299999999988777653    45432222222   2333333332  


Q ss_pred             --cCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcccC
Q 017335          270 --TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       270 --~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                        ..+.||+||--...   ...++.+++.|++| |.++.=....
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn~l~  172 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRVLW  172 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECCSG
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeCCcc
Confidence              23379999943332   23477999999997 9888755433

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.00  E-value=0.072  Score=39.75  Aligned_cols=43  Identities=14%  Similarity=0.023  Sum_probs=37.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +.+.....++++|+|+|+|.+|+-.+..++..|. +|..+.+.+
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            4455677889999999999999999999999998 899988764

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.90  E-value=0.018  Score=45.55  Aligned_cols=86  Identities=10%  Similarity=0.130  Sum_probs=55.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-----EEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-----FINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-----vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      +|+|+|+|.+|.+.+..+...|. .|..+++++++.+.....+.+.     .+...      ..+.+     +.+|++|-
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~D~iii   69 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAN------DPDFL-----ATSDLLLV   69 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEES------CHHHH-----HTCSEEEE
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccc------hhhhh-----cccceEEE
Confidence            68999999999998888888999 9999999887554433333211     11111      11111     26999999


Q ss_pred             CCCCHHHHHHHH----HHhccCCceEEEE
Q 017335          280 CIGLTSVMNDAF----NSSREGWGKTVIL  304 (373)
Q Consensus       280 ~~g~~~~~~~~~----~~l~~~~G~~v~~  304 (373)
                      ++-... .+.++    ..+.++ ..++.+
T Consensus        70 ~vka~~-~~~~~~~l~~~~~~~-~~Iv~~   96 (167)
T d1ks9a2          70 TLKAWQ-VSDAVKSLASTLPVT-TPILLI   96 (167)
T ss_dssp             CSCGGG-HHHHHHHHHTTSCTT-SCEEEE
T ss_pred             eecccc-hHHHHHhhccccCcc-cEEeec
Confidence            998765 34433    344554 566665

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.31  Score=43.58  Aligned_cols=111  Identities=18%  Similarity=0.213  Sum_probs=72.1

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcCCCC--------------
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATC--------------  257 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~~~~--------------  257 (373)
                      +.+...++++..|+...+|..|.+++.+|+.+|++-++++..  +++|.+.++.+|++-+......              
T Consensus        88 a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~  167 (355)
T d1jbqa_          88 AERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWR  167 (355)
T ss_dssp             HHHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHH
T ss_pred             HHHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHH
Confidence            345566788888877788999999999999999954444443  4578888999999755432110              


Q ss_pred             ---------------CCc-------cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHh---ccCCceEEEEc
Q 017335          258 ---------------GDK-------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS---REGWGKTVILG  305 (373)
Q Consensus       258 ---------------~~~-------~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l---~~~~G~~v~~G  305 (373)
                                     .+.       ....++.+..++.+|.|+-++|+..++..+...+   .+. -+++.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~ve  239 (355)
T d1jbqa_         168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVD  239 (355)
T ss_dssp             HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             HHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeec
Confidence                           000       1223343334457899999999766555555444   454 6666554

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.85  E-value=0.035  Score=47.03  Aligned_cols=35  Identities=20%  Similarity=0.179  Sum_probs=31.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ..++|+|+|+|+.|++++..++..|+ +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            46789999999999999999999999 999999754

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.72  E-value=0.17  Score=35.81  Aligned_cols=67  Identities=21%  Similarity=0.353  Sum_probs=48.5

Q ss_pred             CEEEEECCChHHHH-HHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGLGAVGLA-VAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~G~vG~~-a~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      -+|-++|.|++|+. .+++++..|+ .|.+.|..+ +..+.++++|+......+.   +++         .++|+|+-+.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~---~~i---------~~~d~vV~Ss   68 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA---DNW---------YDPDLVIKTP   68 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT---TSC---------CCCSEEEECT
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc---ccc---------CCCCEEEEec
Confidence            36778899888986 4789999999 999999876 4566788999864333222   222         2689998766


Q ss_pred             CC
Q 017335          282 GL  283 (373)
Q Consensus       282 g~  283 (373)
                      .-
T Consensus        69 AI   70 (89)
T d1j6ua1          69 AV   70 (89)
T ss_dssp             TC
T ss_pred             Cc
Confidence            53

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=93.65  E-value=0.36  Score=38.30  Aligned_cols=97  Identities=14%  Similarity=0.149  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC-ceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-TDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga-~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .+..|.+||=+++|. |...+.++ ..|+ +|++++.+++..+.++    .+|. ..+...+.   ..+... .......
T Consensus        38 ~~~~g~~vLDl~~G~-G~~~i~a~-~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~~~~~-~~~~~~~  110 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGS-GAVGLEAA-SEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLPE-AKAQGER  110 (171)
T ss_dssp             HCTTCCEEEEETCSS-CHHHHHHH-HTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHHH-HHHTTCC
T ss_pred             cccCCCeEEEecccc-chhhhhhh-hccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hccccc-ccccCCc
Confidence            467889999986643 22333433 3588 8999999998877764    3554 34554432   222222 2223338


Q ss_pred             ccEEE-EC---CCCHHHHHHHHH--HhccCCceEEE
Q 017335          274 ADYCF-EC---IGLTSVMNDAFN--SSREGWGKTVI  303 (373)
Q Consensus       274 ~d~vi-d~---~g~~~~~~~~~~--~l~~~~G~~v~  303 (373)
                      ||+|| |-   .+....+..++.  .++++ |.++.
T Consensus       111 fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         111 FTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             EEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             cceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            99998 42   233333444443  57886 87664

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.63  E-value=0.11  Score=43.85  Aligned_cols=68  Identities=22%  Similarity=0.282  Sum_probs=51.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++.+..+.+.+.. .|+. .++.++            +..-.+|+.+=
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~-~~~~~~------------~~~~~cDIl~P  102 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD-AVAPNA------------IYGVTCDIFAP  102 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE-ECCGGG------------TTTCCCSEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc-ccCCcc------------cccccccEecc
Confidence            468999999999999999999999999 99999999888776654 5653 332211            22227888885


Q ss_pred             CCC
Q 017335          280 CIG  282 (373)
Q Consensus       280 ~~g  282 (373)
                      |.-
T Consensus       103 cA~  105 (230)
T d1leha1         103 CAL  105 (230)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.63  E-value=0.2  Score=35.86  Aligned_cols=71  Identities=20%  Similarity=0.222  Sum_probs=50.9

Q ss_pred             CCCCCEEEEECCChHHHHH-HHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEE
Q 017335          200 VEVGSTVAIFGLGAVGLAV-AEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a-~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      .+..+++.++|.|++|+.+ +++++..|+ .|.+.|... ...+.+++.|..-....+.   .++         .++|+|
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~---~~i---------~~~d~v   71 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE---EHI---------EGASVV   71 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG---GGG---------TTCSEE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc---ccC---------CCCCEE
Confidence            4567899999998889776 899999999 999999864 4455667788754333332   211         268888


Q ss_pred             EECCCC
Q 017335          278 FECIGL  283 (373)
Q Consensus       278 id~~g~  283 (373)
                      +-+.+-
T Consensus        72 V~S~AI   77 (96)
T d1p3da1          72 VVSSAI   77 (96)
T ss_dssp             EECTTS
T ss_pred             EECCCc
Confidence            866653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.55  E-value=0.092  Score=43.01  Aligned_cols=89  Identities=24%  Similarity=0.271  Sum_probs=57.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|.+|.|+|.|.+|...+++++.+|+ +|++.++..... .....+...+        .++.+.+.     ..|+|.-+.
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~--------~~l~~ll~-----~sD~i~~~~  112 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF-----HSDCVTLHC  112 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc--------cchhhccc-----cCCEEEEee
Confidence            57899999999999999999999999 999999764432 2223333211        22322222     367777655


Q ss_pred             CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....     .=...++.|+++ ..++..+.
T Consensus       113 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCC-CeEEecCC
Confidence            5221     112456778886 77777754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.51  E-value=0.036  Score=47.25  Aligned_cols=34  Identities=24%  Similarity=0.371  Sum_probs=30.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +++|+|+|+|.-|+.++..++..|. +|.+++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5789999999999999999999999 999999754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.50  E-value=0.073  Score=43.54  Aligned_cols=39  Identities=21%  Similarity=0.302  Sum_probs=34.9

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      ++|.|+|+|.+|...++++...|+ +|+..+++++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999999999999999 999999999876655

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.46  E-value=0.45  Score=37.86  Aligned_cols=99  Identities=24%  Similarity=0.290  Sum_probs=62.1

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CCeEEEEcCC--hhHHHHHHHcCCceEEcCCCCCCccHHH-------HHHHhcCCCc
Q 017335          205 TVAIFGLGAVGLAVAEGARLNR-ASKIIGVDIN--PEKFEIGKKFGITDFINPATCGDKTVSQ-------VIKEMTDGGA  274 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~--~~~~~~~~~lga~~vi~~~~~~~~~~~~-------~i~~~~~~~~  274 (373)
                      +|.|.|-|-+|..+.+++...+ . +++++...  ......+.+.+.+......+ ....+.+       .+.++. .++
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPE-RVKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGG-GHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccc-cceeecccCcccCCChhHhh-cCC
Confidence            6899999999999999887655 5 66665432  23444555555543322111 0000100       001111 279


Q ss_pred             cEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       275 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      |+|+||+|.-...+.+-..+..| -+++..+..
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~  111 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGGE  111 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             CEEEEccCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            99999999887788888899887 888877653

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.42  E-value=0.21  Score=40.83  Aligned_cols=75  Identities=23%  Similarity=0.323  Sum_probs=49.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      +....++ .|++||-+|+|. |.+++. +...|+++|++++.+++..+.+++- ....+++.+-          .+ .++
T Consensus        41 ~~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~----------~~-l~~  106 (197)
T d1ne2a_          41 IYNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV----------SE-ISG  106 (197)
T ss_dssp             HHHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG----------GG-CCC
T ss_pred             HHHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEeh----------hh-cCC
Confidence            3444455 699999999865 555444 4456776899999999998888763 3334554332          12 235


Q ss_pred             CccEEEECCC
Q 017335          273 GADYCFECIG  282 (373)
Q Consensus       273 ~~d~vid~~g  282 (373)
                      .||+||-...
T Consensus       107 ~fD~Vi~NPP  116 (197)
T d1ne2a_         107 KYDTWIMNPP  116 (197)
T ss_dssp             CEEEEEECCC
T ss_pred             cceEEEeCcc
Confidence            8999996543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.36  E-value=0.054  Score=43.91  Aligned_cols=38  Identities=26%  Similarity=0.327  Sum_probs=33.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      ...+++|+|+|+|+.|+.++..+...|. +|...+.+++
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccCc
Confidence            4557899999999999999999999999 9999998653

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.35  E-value=0.088  Score=43.72  Aligned_cols=94  Identities=16%  Similarity=0.069  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----Cc--eEEcCCCCCCccHHHHHHHhc--
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----IT--DFINPATCGDKTVSQVIKEMT--  270 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----a~--~vi~~~~~~~~~~~~~i~~~~--  270 (373)
                      ...++.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++.-    ..  .++..+-          .++.  
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~----------~~~~~~  124 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL----------QDFTPE  124 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG----------GGCCCC
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccccc----------cccccc
Confidence            456788999999987 7777777766665 9999999999888887532    11  2333221          2222  


Q ss_pred             CCCccEEEEC-----CCCH---HHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFEC-----IGLT---SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~-----~g~~---~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.+|+|+..     +..+   ..+..+.+.|+++ |.++..-
T Consensus       125 ~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~  166 (222)
T d2ex4a1         125 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKD  166 (222)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEE
Confidence            2379999963     2222   3578889999997 9988764

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.30  E-value=0.46  Score=40.95  Aligned_cols=110  Identities=16%  Similarity=0.100  Sum_probs=69.2

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcCCCC--------------
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATC--------------  257 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~~~~--------------  257 (373)
                      +.+...++++.+|+...+|..|++++..++.+|.+-++.+..  ++.|.+.++.+|++-++...+.              
T Consensus        51 a~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~  130 (292)
T d2bhsa1          51 AEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMAN  130 (292)
T ss_dssp             HHHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             HHHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccc
Confidence            345556777887777788999999999999999853444333  5567888899998754433221              


Q ss_pred             ----------CCc-c-------HHHHHHHhcCCCccEEEECCCCHHHHHHHHHHh---ccCCceEEEE
Q 017335          258 ----------GDK-T-------VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS---REGWGKTVIL  304 (373)
Q Consensus       258 ----------~~~-~-------~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l---~~~~G~~v~~  304 (373)
                                .+. +       ...++.+..++.+|.++-++|+..++.-+.+.+   .+. .+++.+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~V  197 (292)
T d2bhsa1         131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGL  197 (292)
T ss_dssp             HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEE
T ss_pred             cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEe
Confidence                      011 0       122333333446899998888766566555555   443 555544

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.30  E-value=0.077  Score=45.04  Aligned_cols=35  Identities=26%  Similarity=0.346  Sum_probs=31.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .+.+|+|+|+|++|..++..+..+|.+++..+|.+
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            35799999999999999999999999999999864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.27  E-value=0.057  Score=40.26  Aligned_cols=35  Identities=20%  Similarity=0.173  Sum_probs=31.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .++|+|+|+|.+|+-+++.++.+|. +|..+.+.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            4789999999999999999999999 9999987653

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.27  E-value=0.16  Score=40.84  Aligned_cols=95  Identities=20%  Similarity=0.208  Sum_probs=58.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CCeEEEEcC-Ch-hHHHHHHHcCCceEEcCCCC---------CCccHHHHHHHhcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNR-ASKIIGVDI-NP-EKFEIGKKFGITDFINPATC---------GDKTVSQVIKEMTDG  272 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~-~~-~~~~~~~~lga~~vi~~~~~---------~~~~~~~~i~~~~~~  272 (373)
                      +|.|.|.|-+|+..++.+.... . +|+++.. .+ .....+.+.+.......+..         -..++....     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            6889999999999999988654 5 7777643 22 23333333332221111100         000111100     1


Q ss_pred             CccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       273 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ++|+|+||+|.-...+.+-..++.+ -+++..+.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence            6899999999877788888888886 78887654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.25  E-value=0.12  Score=41.48  Aligned_cols=49  Identities=24%  Similarity=0.179  Sum_probs=37.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +.+...--.+++|||+|+|+++.+++..+...  ++|.++.|+.++.+.+.
T Consensus         9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~--~~i~I~nR~~~ka~~l~   57 (177)
T d1nvta1           9 LEEEIGRVKDKNIVIYGAGGAARAVAFELAKD--NNIIIANRTVEKAEALA   57 (177)
T ss_dssp             HHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS--SEEEEECSSHHHHHHHH
T ss_pred             HHHhCCCcCCCEEEEECCcHHHHHHHHHHccc--cceeeehhhhhHHHHHH
Confidence            44444445789999999999999887776544  48999999998877653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.11  E-value=0.1  Score=42.42  Aligned_cols=90  Identities=17%  Similarity=0.094  Sum_probs=61.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+.+|.|+|.|.+|...++.++.+|. +|++.++........+..+....        .++.+    +. ...|+|.-+.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~--------~~l~~----~l-~~sD~v~~~~  108 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATRED----MY-PVCDVVTLNC  108 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHH----HG-GGCSEEEECS
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc--------CCHHH----HH-Hhccchhhcc
Confidence            57899999999999999999999999 99999987655555555543211        12221    11 1578887655


Q ss_pred             CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....     .-...++.|+++ ..+|.++.
T Consensus       109 plt~~T~~li~~~~l~~mk~g-a~lIN~aR  137 (188)
T d2naca1         109 PLHPETEHMINDETLKLFKRG-AYIVNTAR  137 (188)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             cccccchhhhHHHHHHhCCCC-CEEEecCc
Confidence            5322     123567778886 77777754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.09  E-value=0.38  Score=37.44  Aligned_cols=99  Identities=16%  Similarity=0.223  Sum_probs=63.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHC--CCCeEEEEcCChhH---HHHHHHcCCceEEcCCCCCCccHH--------------
Q 017335          204 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEK---FEIGKKFGITDFINPATCGDKTVS--------------  263 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~--G~~~Vi~~~~~~~~---~~~~~~lga~~vi~~~~~~~~~~~--------------  263 (373)
                      ++|.|+|+ |++|..++.+.+..  .+ +|+++..+..-   .+.++++....++-.++.....+.              
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence            36899999 99999999999986  36 77776654432   223456777776655430000111              


Q ss_pred             --HHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          264 --QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       264 --~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                        +.+.++... .+|+|+..+.+...+.-.+.+++.| -+ +.+.
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g-k~-iaLA  123 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG-KT-ILLA  123 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT-CE-EEEC
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC-Ce-EEEE
Confidence              122222223 6899999888877788888888884 44 4443

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.98  E-value=0.15  Score=44.99  Aligned_cols=99  Identities=14%  Similarity=0.062  Sum_probs=61.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHHhcCCC
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      ..+|++||=+++|. |..++.+|+ .+. +|++++.++...+.+++    .|.+  .++..+.   .++.+.+.. .++.
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~-g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~---~~~~~~~~~-~~~~  215 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL-GFR-EVVAVDSSAEALRRAEENARLNGLGNVRVLEANA---FDLLRRLEK-EGER  215 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH-HEE-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCH---HHHHHHHHH-TTCC
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh-cCC-cEEeecchHHHHHHHHHHHHHcCCCCcceeeccH---HHHhhhhHh-hhcC
Confidence            34799999997754 334455554 234 99999999998888763    4543  2333222   233332222 1238


Q ss_pred             ccEEE-ECC--C--C----------HHHHHHHHHHhccCCceEEEEcc
Q 017335          274 ADYCF-ECI--G--L----------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       274 ~d~vi-d~~--g--~----------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ||+|+ |..  +  .          ...+..+++.|++| |.++.+..
T Consensus       216 fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~sc  262 (318)
T d1wxxa2         216 FDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASC  262 (318)
T ss_dssp             EEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             CCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            99999 421  1  1          12466788899997 99888754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.88  E-value=0.18  Score=40.82  Aligned_cols=88  Identities=22%  Similarity=0.299  Sum_probs=60.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+.++.|+|.|.+|...+++++.+|. +|++.++...+... ...+.. .        .++.+.+.     ..|+|.-+.
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~-~--------~~l~ell~-----~sDiv~~~~  106 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIE-L--------LSLDDLLA-----RADFISVHL  106 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCE-E--------CCHHHHHH-----HCSEEEECC
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCce-e--------ccHHHHHh-----hCCEEEEcC
Confidence            47899999999999999999999999 99999976554433 233332 1        12322222     478888766


Q ss_pred             CCHH----H-HHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS----V-MNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~----~-~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....    . =...++.|+++ ..++.++.
T Consensus       107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sR  135 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPG-VIIVNAAR  135 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence            5322    1 23567778886 88887764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.84  E-value=0.059  Score=40.62  Aligned_cols=34  Identities=12%  Similarity=-0.051  Sum_probs=29.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      ..++++|+|+|.+|+-.++.++.+|. +|..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            34689999999999999999999999 78888754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.77  E-value=0.13  Score=43.61  Aligned_cols=34  Identities=15%  Similarity=0.124  Sum_probs=30.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      +.||+|+ +++|.+.++.+...|+ +|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            5688898 8999999999999999 99999988654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.76  E-value=0.87  Score=34.91  Aligned_cols=95  Identities=12%  Similarity=0.030  Sum_probs=59.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHH-HHHH---HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-EIGK---KFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~-~~~~---~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      -++++|.|.|.+|..+++.+...|. .|++++.++++. +.+.   ..|. .++..+. .+++   .+++..-..+|.++
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~-~vi~Gd~-~d~~---~L~~a~i~~a~~vi   76 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNA-DVIPGDS-NDSS---VLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTC-EEEESCT-TSHH---HHHHHTTTTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCc-EEEEccC-cchH---HHHHhccccCCEEE
Confidence            4679999999999999999999999 888888877543 2232   2344 3454443 1232   33333223799999


Q ss_pred             ECCCCHHH---HHHHHHHhccCCceEEEE
Q 017335          279 ECIGLTSV---MNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       279 d~~g~~~~---~~~~~~~l~~~~G~~v~~  304 (373)
                      -+++....   .....+.+.+. -+++..
T Consensus        77 ~~~~~d~~n~~~~~~~r~~~~~-~~iia~  104 (153)
T d1id1a_          77 ALSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             ECSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             EccccHHHHHHHHHHHHHhCCC-CceEEE
Confidence            98887552   22233344553 555544

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=92.73  E-value=0.13  Score=43.85  Aligned_cols=102  Identities=10%  Similarity=-0.117  Sum_probs=67.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCceEEcCCCCCCccHHHHHHHhc--
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMT--  270 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~~vi~~~~~~~~~~~~~i~~~~--  270 (373)
                      .++......+.+||=+|+|. |..+..++..... .|.+++.+++-.+.+++. .....++...   .+    +.++.  
T Consensus        85 fl~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~---~d----~~~~~~~  155 (254)
T d1xtpa_          85 FIASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL---AS----METATLP  155 (254)
T ss_dssp             HHHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE---SC----GGGCCCC
T ss_pred             HHhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE---cc----ccccccC
Confidence            34455567788999999987 8888888876665 899999999998888753 2211111111   11    12222  


Q ss_pred             CCCccEEEECCC-----CH---HHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFECIG-----LT---SVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.||+|+...-     .+   ..+..+.+.|+++ |.++..-
T Consensus       156 ~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            237999985432     12   3477889999997 9988753

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=92.73  E-value=0.024  Score=48.62  Aligned_cols=100  Identities=15%  Similarity=0.083  Sum_probs=63.9

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC-c--eEEcCCCCCCccHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-T--DFINPATCGDKTVSQVI  266 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga-~--~vi~~~~~~~~~~~~~i  266 (373)
                      +.+...+....+||-+|+|. |..+..+++...-.++++++. ++..+.++    +.|. +  ..+..      ++    
T Consensus        72 ~~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~------D~----  139 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG------DF----  139 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC------CT----
T ss_pred             HHhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchhhccc------cc----
Confidence            45666788889999999986 888889998874338888986 44444433    3342 1  12211      11    


Q ss_pred             HHhcCCCccEEEECC-----CCH---HHHHHHHHHhccCCceEEEEcc
Q 017335          267 KEMTDGGADYCFECI-----GLT---SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       267 ~~~~~~~~d~vid~~-----g~~---~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+..+.++|+|+-..     +.+   ..+..+.+.|++| |+++....
T Consensus       140 ~~~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         140 FEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             TSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             hhhcccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            111223789988432     212   3478899999997 99987653

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.66  E-value=0.047  Score=42.64  Aligned_cols=84  Identities=8%  Similarity=-0.133  Sum_probs=52.7

Q ss_pred             EEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHH
Q 017335          207 AIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV  286 (373)
Q Consensus       207 lI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~  286 (373)
                      -++|.|.+|...++.++..+. .+.+..|+.++.+.+.+.+.....+..+            . -...|+||-|+.... 
T Consensus         3 gfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~------------~-~~~~DiVil~v~d~~-   67 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK------------H-PELNGVVFVIVPDRY-   67 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC------------C-CC---CEEECSCTTT-
T ss_pred             EEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh------------h-hccCcEEEEeccchh-
Confidence            467999999998887765443 4457899999998888766533322221            1 126799999998776 


Q ss_pred             HHHHHHHhccCCceEEEEc
Q 017335          287 MNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       287 ~~~~~~~l~~~~G~~v~~G  305 (373)
                      +..+.+.++..+..++.+.
T Consensus        68 i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          68 IKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHHHTTTCCSSCCEEECC
T ss_pred             hhHHHhhhcccceeeeecc
Confidence            7778888875414445543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.63  E-value=0.17  Score=37.99  Aligned_cols=42  Identities=21%  Similarity=0.207  Sum_probs=35.2

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .+...-..+++|+|+|+|.+|+-+++.+..+|. +|..+++.+
T Consensus        22 ~~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          22 KQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            344445567899999999999999999999999 899998764

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=92.59  E-value=0.13  Score=44.51  Aligned_cols=96  Identities=16%  Similarity=0.218  Sum_probs=65.8

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhc-
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT-  270 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~-  270 (373)
                      ..+..+.+||=+|+|. |..+..+++..+. .+|+++|.+++..+.+++    .+.+ ..+..+.          .++. 
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~----------~~~~~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDA----------TEIEL   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCT----------TTCCC
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccc----------ccccc
Confidence            3567788999999986 8888888887642 289999999988887764    2332 1222221          1122 


Q ss_pred             CCCccEEEECCC-----C-HHHHHHHHHHhccCCceEEEEc
Q 017335          271 DGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       271 ~~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ++.+|+|+....     . ...+..+.+.|++| |+++..-
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            337999995432     2 33688999999997 9988653

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=92.50  E-value=0.33  Score=38.59  Aligned_cols=98  Identities=18%  Similarity=0.198  Sum_probs=60.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHHHHc----C---Cce-------EEcCCCC---CCccHHHH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP--EKFEIGKKF----G---ITD-------FINPATC---GDKTVSQV  265 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~~~l----g---a~~-------vi~~~~~---~~~~~~~~  265 (373)
                      +|.|.|-|-+|+++.+++...++ +|+++-...  +...++-+.    |   .+-       +++.+..   ...+    
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~----   76 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD----   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC----
Confidence            58899999999999999888888 777765432  334444322    2   000       1111000   0000    


Q ss_pred             HHHhc-CC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          266 IKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       266 i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                      ..++. .. ++|+|+||+|.-...+.+...+..+ .+-|.+..+.
T Consensus        77 p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  120 (168)
T d2g82a1          77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA  120 (168)
T ss_dssp             GGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             hHHCcccccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence            11121 12 8999999999776678888888886 7777776543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.38  E-value=0.085  Score=44.91  Aligned_cols=32  Identities=19%  Similarity=0.394  Sum_probs=29.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +|||+|+ |-+|...+..++..|+ +|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5899998 9999999999999999 999998754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.35  E-value=0.21  Score=42.36  Aligned_cols=42  Identities=19%  Similarity=0.105  Sum_probs=33.2

Q ss_pred             CCCEEEEECC-ChHHHHHHH-HHHH--CCCCeEEEEcCChhHHHHHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAE-GARL--NRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~-la~~--~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      .|+++||+|+ +++|++.++ ||+.  .|+ +|+.+++++++++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHH
Confidence            4677888898 899998665 5553  688 9999999998877653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.35  E-value=0.11  Score=38.64  Aligned_cols=36  Identities=17%  Similarity=0.231  Sum_probs=32.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      ..++|+|+|+|.+|+-+++.+..+|. +|..+.+.+.
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence            45799999999999999999999999 8999987653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.14  E-value=0.081  Score=43.15  Aligned_cols=84  Identities=18%  Similarity=0.173  Sum_probs=55.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce------EEcCCCCCCccHHHHHHHhcCCCccEE
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD------FINPATCGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~------vi~~~~~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      .+|.|+|+|..|.+.+..+...|. +|....++++..+.+.+-+...      .+...-....++.+.+     .+.|+|
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~-----~~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-----NGAEII   81 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-----TTCSCE
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc-----CCCCEE
Confidence            369999999999999988888887 8999999998888776533110      1110000001222222     268999


Q ss_pred             EECCCCHHHHHHHHHHh
Q 017335          278 FECIGLTSVMNDAFNSS  294 (373)
Q Consensus       278 id~~g~~~~~~~~~~~l  294 (373)
                      +-++.+.. +...++.+
T Consensus        82 iiavPs~~-~~~~~~~~   97 (189)
T d1n1ea2          82 LFVIPTQF-LRGFFEKS   97 (189)
T ss_dssp             EECSCHHH-HHHHHHHH
T ss_pred             EEcCcHHH-HHHHHHHH
Confidence            99998765 55555544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.12  E-value=0.12  Score=41.08  Aligned_cols=39  Identities=26%  Similarity=0.230  Sum_probs=34.0

Q ss_pred             EEEEE-CCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          205 TVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       205 ~VlI~-G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +|.|+ |+|++|.+.++.+...|+ +|++.+|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            57888 559999999999999999 9999999998876663

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.90  E-value=0.34  Score=37.57  Aligned_cols=91  Identities=15%  Similarity=0.077  Sum_probs=53.4

Q ss_pred             CCCCEEEEECC--ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc---eEEcCCCCCCccHHHHHHHhcC
Q 017335          201 EVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT---DFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       201 ~~~~~VlI~G~--G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~---~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      -.|.+||=+++  |.+|+   .++ ..|+++|+.++.+++..+.++    .++..   .++..      +..+.+. ...
T Consensus        13 ~~g~~vlDl~~GtG~~~i---ea~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~------D~~~~l~-~~~   81 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI---EAV-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM------EAERAID-CLT   81 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH---HHH-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS------CHHHHHH-HBC
T ss_pred             CCCCeEEEcCCccCHHHH---HHH-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc------ccccccc-ccc
Confidence            36889999966  45554   433 468779999999988776654    35542   34432      3444443 334


Q ss_pred             CCccEEE-ECCCCHHHHHHHHH------HhccCCceEEE
Q 017335          272 GGADYCF-ECIGLTSVMNDAFN------SSREGWGKTVI  303 (373)
Q Consensus       272 ~~~d~vi-d~~g~~~~~~~~~~------~l~~~~G~~v~  303 (373)
                      +.+|+|| |..-........+.      .|+++ |.++.
T Consensus        82 ~~fDiIf~DPPy~~~~~~~~l~~i~~~~~L~~~-g~iii  119 (152)
T d2esra1          82 GRFDLVFLDPPYAKETIVATIEALAAKNLLSEQ-VMVVC  119 (152)
T ss_dssp             SCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             cccceeEechhhccchHHHHHHHHHHCCCcCCC-eEEEE
Confidence            4899999 43322222333333      35665 66553

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.86  E-value=0.77  Score=37.08  Aligned_cols=107  Identities=16%  Similarity=0.197  Sum_probs=67.6

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~  267 (373)
                      +.+...+++++.++=.+.|.=|. +-.+++.. +. +|+++|.+++..+.+++    ++. -.+++..-   .++...+.
T Consensus        15 vi~~l~~~~~~~~lD~t~G~Ggh-s~~il~~~~~~-~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f---~~~~~~~~   89 (192)
T d1m6ya2          15 VIEFLKPEDEKIILDCTVGEGGH-SRAILEHCPGC-RIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLK   89 (192)
T ss_dssp             HHHHHCCCTTCEEEETTCTTSHH-HHHHHHHCTTC-EEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHH
T ss_pred             HHHhhCCCCCCEEEEecCCCcHH-HHHHHhcCCCC-eEEEeechHHHHHHHHHhhccccccccchhHHH---hhHHHHHH
Confidence            45666789999876655455333 33444544 45 99999999999988865    232 23344332   45555555


Q ss_pred             HhcCCCccEEE-ECCCCH--------------HHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTDGGADYCF-ECIGLT--------------SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~~~~d~vi-d~~g~~--------------~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....+.+|.|+ |..=+.              ..+..+.+.|+++ |+++.+..
T Consensus        90 ~~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f  142 (192)
T d1m6ya2          90 TLGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISF  142 (192)
T ss_dssp             HTTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEES
T ss_pred             HcCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeecc
Confidence            55445898886 532222              2466778888997 99887754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.83  E-value=0.42  Score=37.85  Aligned_cols=43  Identities=23%  Similarity=0.166  Sum_probs=37.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  248 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga  248 (373)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            37789999999998888888899 99999999999998876553

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=91.82  E-value=0.77  Score=37.43  Aligned_cols=95  Identities=14%  Similarity=0.160  Sum_probs=63.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce--EEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD--FINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~--vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      .+..||=+|+|. |..++.+|+..--..+++++.++.....+    ++.|.+.  ++..+.   .++   ...+.++.+|
T Consensus        29 ~~PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da---~~l---~~~~~~~~~d  101 (204)
T d2fcaa1          29 DNPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA---DTL---TDVFEPGEVK  101 (204)
T ss_dssp             CCCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG---GGH---HHHCCTTSCC
T ss_pred             CCceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccch---hhh---hcccCchhhh
Confidence            345677789987 88888999986434999999998876665    3456543  343332   222   2223344788


Q ss_pred             EEEECCCC--------------HHHHHHHHHHhccCCceEEEE
Q 017335          276 YCFECIGL--------------TSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       276 ~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .|+-....              +..+..+.+.|++| |.+.+.
T Consensus       102 ~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~  143 (204)
T d2fcaa1         102 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFK  143 (204)
T ss_dssp             EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEE
T ss_pred             ccccccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence            77744332              35688999999997 998776

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.81  E-value=0.83  Score=36.22  Aligned_cols=89  Identities=16%  Similarity=0.207  Sum_probs=60.5

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCCeEEE-EcCChhHHHHH-HHcCCc---eEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335          205 TVAIFGLGAVGLAVAEGARLN-RASKIIG-VDINPEKFEIG-KKFGIT---DFINPATCGDKTVSQVIKEMTDGGADYCF  278 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~-G~~~Vi~-~~~~~~~~~~~-~~lga~---~vi~~~~~~~~~~~~~i~~~~~~~~d~vi  278 (373)
                      +|.|+|.|.+|...+..++.. ++ +|++ .++++++.+.+ ++++..   .++       .++.+.+.   ...+|+|+
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~iD~v~   71 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH-------GSYESLLE---DPEIDALY   71 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE-------SSHHHHHH---CTTCCEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec-------CcHHHhhh---ccccceee
Confidence            588999999999888888776 56 6775 46677765554 455532   233       23333232   23799999


Q ss_pred             ECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          279 ECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       279 d~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      -++....-.+.+..++..  |.=+++.-
T Consensus        72 I~tp~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          72 VPLPTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             ECCCGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             ecccchhhcchhhhhhhc--cceeeccc
Confidence            999887778888888887  45566654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.77  E-value=0.11  Score=43.50  Aligned_cols=38  Identities=18%  Similarity=0.131  Sum_probs=33.7

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .+.+++|+|+|+|+.|+.++..++..|. +|.+++.+++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            3567899999999999999999999999 9999987664

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=91.70  E-value=0.087  Score=43.90  Aligned_cols=93  Identities=11%  Similarity=0.024  Sum_probs=59.9

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhc-CCCc
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMT-DGGA  274 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~-~~~~  274 (373)
                      .....+++||=+|+|. |..+..+++ .|. +|++++.+++..+.+++-..+  .++..+.   .       ... ++.|
T Consensus        16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~---~-------~~~~~~~f   82 (225)
T d2p7ia1          16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRF---E-------DAQLPRRY   82 (225)
T ss_dssp             GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCG---G-------GCCCSSCE
T ss_pred             hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccc---c-------cccccccc
Confidence            3445677899999976 767666654 477 899999999999998764322  2333221   1       122 3389


Q ss_pred             cEEEECC-----CCHH-HHHHHH-HHhccCCceEEEE
Q 017335          275 DYCFECI-----GLTS-VMNDAF-NSSREGWGKTVIL  304 (373)
Q Consensus       275 d~vid~~-----g~~~-~~~~~~-~~l~~~~G~~v~~  304 (373)
                      |+|+..-     ..+. .+..+. ++|++| |.++..
T Consensus        83 D~I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          83 DNIVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEEEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             ccccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            9998432     2222 345565 578997 987754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=91.61  E-value=0.21  Score=44.45  Aligned_cols=33  Identities=21%  Similarity=0.199  Sum_probs=28.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +.|||+|+ |-+|...+..+...|. +|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57899998 9999999999999999 999999853

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.60  E-value=0.17  Score=38.50  Aligned_cols=40  Identities=20%  Similarity=0.265  Sum_probs=34.9

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      ..++++++|+|+|+|.+|+-++..++.+|. +|..+++.+.
T Consensus        30 ~~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          30 RQLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             HTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             HhhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            345678999999999999999999999999 9999997653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.59  E-value=0.094  Score=45.33  Aligned_cols=37  Identities=19%  Similarity=0.181  Sum_probs=32.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ....++|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            4456799999999999999999988999 999999764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.55  E-value=0.099  Score=44.19  Aligned_cols=34  Identities=24%  Similarity=0.279  Sum_probs=29.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .|+|+|+|..|++++.+++..|+..|.+++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6899999999999999999999768888887653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.54  E-value=0.15  Score=38.05  Aligned_cols=35  Identities=17%  Similarity=0.258  Sum_probs=31.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ..++++|+|+|.+|+-++++++.+|. +|..+.+.+
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45889999999999999999999999 888888664

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.44  E-value=0.13  Score=42.82  Aligned_cols=35  Identities=17%  Similarity=0.177  Sum_probs=31.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      +...+|+|+|+|..|+.++..+...|. +|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            455689999999999999999999999 89999974

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.41  E-value=0.075  Score=43.91  Aligned_cols=33  Identities=15%  Similarity=0.299  Sum_probs=29.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .|+|+|+|..|+.++..++..|.++|.++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999999975699999764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.34  E-value=0.16  Score=38.06  Aligned_cols=35  Identities=23%  Similarity=0.380  Sum_probs=31.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ..++++|+|+|.+|+-+++++..+|. +|..+.+.+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            34799999999999999999999999 999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.32  E-value=0.09  Score=43.96  Aligned_cols=37  Identities=16%  Similarity=0.205  Sum_probs=32.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF  240 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~  240 (373)
                      ++++||+|+ +++|.+.++.+...|+ +|+.+++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~   38 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE   38 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence            468899998 8999999999999999 999999887643

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.32  E-value=0.4  Score=41.47  Aligned_cols=100  Identities=13%  Similarity=0.218  Sum_probs=59.6

Q ss_pred             HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhcC
Q 017335          197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      ....++|++||-.-+++=|.. .+++..+.-.+|++.+.++.|...+    +++|... ++...+   ....   ....+
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt-~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~---~~~~---~~~~~  169 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKT-THILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPS---QWCGE  169 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHH-HHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTH---HHHTT
T ss_pred             ccCccccceeEeccCccccch-hhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc---cccc---hhccc
Confidence            457899999999855332222 2333334324899999999987666    4578643 232222   1111   11223


Q ss_pred             CCccEEE-E--CCCCHH-------------------------HHHHHHHHhccCCceEEEE
Q 017335          272 GGADYCF-E--CIGLTS-------------------------VMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~~~d~vi-d--~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.||.|+ |  |+|...                         .+..+++.+++| |++|-.
T Consensus       170 ~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYs  229 (284)
T d1sqga2         170 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYA  229 (284)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             ccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEe
Confidence            4799888 6  555421                         466677788886 876633

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=91.29  E-value=0.24  Score=39.27  Aligned_cols=94  Identities=16%  Similarity=0.185  Sum_probs=64.5

Q ss_pred             ccchhhhhHHHHHHHHhC-CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335          182 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  259 (373)
Q Consensus       182 ~l~~~~~ta~~~~~~~~~-~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~  259 (373)
                      .+||+....+. +++.-+ --.|++|+|+|. ..+|.-...++...|+ +|+.+.+..                      
T Consensus        16 ~~PcTp~aI~~-lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t----------------------   71 (166)
T d1b0aa1          16 LRPCTPRGIVT-LLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT----------------------   71 (166)
T ss_dssp             SCCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------
T ss_pred             CCCchHHHHHH-HHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc----------------------
Confidence            45555454444 344444 347999999998 5799999999999999 887776432                      


Q ss_pred             ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                      ++..+.++     .+|+++-++|.+..+.  -+.++++ ..++++|..
T Consensus        72 ~~l~~~~~-----~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          72 KNLRHHVE-----NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             SCHHHHHH-----HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             chhHHHHh-----hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence            22222221     5789999999776333  3467886 899999874

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=91.23  E-value=0.13  Score=43.63  Aligned_cols=94  Identities=16%  Similarity=0.157  Sum_probs=60.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eE--EcCCCCCCccHHHHHHHh-cC
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEM-TD  271 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~v--i~~~~~~~~~~~~~i~~~-~~  271 (373)
                      ++++++||=+|+|. |..+..+++. |..+|+++|.+++.++.+++    .+.. .+  +..+.      .  -... .+
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~------~--~~~~~~~   91 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS------Y--GRHMDLG   91 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT------T--TSCCCCS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcch------h--hhccccc
Confidence            67899999999976 6566677765 44489999999998888864    2321 11  11111      0  0011 12


Q ss_pred             CCccEEEECCCC------H----HHHHHHHHHhccCCceEEEE
Q 017335          272 GGADYCFECIGL------T----SVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       272 ~~~d~vid~~g~------~----~~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.||+|+.....      .    ..+..+.+.|++| |.++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            379999864331      1    2466777889997 998753

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=91.23  E-value=0.11  Score=42.17  Aligned_cols=39  Identities=28%  Similarity=0.389  Sum_probs=34.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG  243 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~  243 (373)
                      ++|.|+|+|.+|...+.++...|+ +|+..+++++..+.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            579999999999998888888899 999999999876654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=91.17  E-value=0.72  Score=36.51  Aligned_cols=100  Identities=23%  Similarity=0.291  Sum_probs=62.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHHHc----C---Cc-------eEEcCCCCCCccHH--HH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKF----G---IT-------DFINPATCGDKTVS--QV  265 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~l----g---a~-------~vi~~~~~~~~~~~--~~  265 (373)
                      +|.|.|-|-+|+++...+...+. +|+++-.   +.+...++-+.    |   .+       -+++.+..   .+.  ..
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I---~~~~~~~   77 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKI---TVFNEMK   77 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEE---EEECCSS
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEE---EEEecCC
Confidence            57899999999999998888888 6777643   23555555432    2   10       01111100   000  00


Q ss_pred             HHHhc-CC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          266 IKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       266 i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      ..++. .. ++|+|+||+|.-...+.+...+..+ .+-|.+..+..
T Consensus        78 p~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~~  122 (169)
T d1dssg1          78 PENIPWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPSA  122 (169)
T ss_dssp             GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCCS
T ss_pred             hHHCCccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCcc
Confidence            01111 12 8999999999877778888999986 87787876433

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.16  E-value=0.76  Score=35.30  Aligned_cols=39  Identities=18%  Similarity=0.247  Sum_probs=31.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  244 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~  244 (373)
                      +|-|+|.|.+|...+.-+...|. .|++.++..++....+
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence            57889999999999999888999 8888887766554443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.16  E-value=0.41  Score=42.12  Aligned_cols=38  Identities=24%  Similarity=0.155  Sum_probs=30.9

Q ss_pred             CCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHHH
Q 017335          203 GSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFE  241 (373)
Q Consensus       203 ~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~~  241 (373)
                      ++..||+|+|   ++|++.++.+...|+ +|+.+.++++...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhhh
Confidence            5678999953   899999999999999 8998887665443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.13  E-value=0.5  Score=35.61  Aligned_cols=27  Identities=15%  Similarity=0.249  Sum_probs=23.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEE
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIG  232 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~  232 (373)
                      +|.|+|+ |-+|++..++++..+. ++++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~   29 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVL   29 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCC-eEEE
Confidence            5889998 9999999999999998 5554

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.02  E-value=0.086  Score=45.34  Aligned_cols=33  Identities=21%  Similarity=0.254  Sum_probs=30.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .|+|+|+|+.|++++..++..|. +|.++++.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 9999998753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.00  E-value=1.5  Score=33.13  Aligned_cols=28  Identities=18%  Similarity=0.372  Sum_probs=21.3

Q ss_pred             EEEEECC-ChHHHHHHHHHHH-CCCCeEEEE
Q 017335          205 TVAIFGL-GAVGLAVAEGARL-NRASKIIGV  233 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~-~G~~~Vi~~  233 (373)
                      +|.|.|+ |-+|...++.... -++ ++++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEE
Confidence            5889997 9999998887765 456 55543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=90.97  E-value=0.41  Score=41.93  Aligned_cols=30  Identities=23%  Similarity=0.199  Sum_probs=27.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      +|||+|+ |-+|...+..+...|. +|+++++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            5999998 9999999999999999 9999875

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=90.88  E-value=0.77  Score=39.86  Aligned_cols=101  Identities=16%  Similarity=0.122  Sum_probs=67.3

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcCCCC---------------
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATC---------------  257 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~~~~---------------  257 (373)
                      .+...+.++++|+...+|.-|++++..++..|++.++++..  ++.|...++.+|+..+......               
T Consensus        53 ~~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~  132 (310)
T d1y7la1          53 EKDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVAS  132 (310)
T ss_dssp             HHTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHh
Confidence            34455678887777777999999999999999965555544  3457777888998766532210               


Q ss_pred             -----------CCc--------cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhc
Q 017335          258 -----------GDK--------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR  295 (373)
Q Consensus       258 -----------~~~--------~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~  295 (373)
                                 .+.        ....++.+..++.+|.|+-++|+..++......++
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         133 DPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             CTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             hcCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                       001        12223444444478999988888776777777665

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=90.80  E-value=0.19  Score=43.01  Aligned_cols=38  Identities=13%  Similarity=0.076  Sum_probs=28.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG  243 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~  243 (373)
                      .+||+|+ +++|.+.++.+...|+ +|+.+++ ++++.+.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~   43 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   43 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHH
Confidence            4577888 8999999999999999 8887655 44444433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=90.46  E-value=0.61  Score=40.90  Aligned_cols=38  Identities=16%  Similarity=0.140  Sum_probs=32.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF  240 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~  240 (373)
                      ..++|||+|+ |.+|...+..+...|. +|+++.|+..+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchh
Confidence            4679999998 9999999999999999 899998876543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.43  E-value=0.19  Score=37.12  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=30.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .++++|+|+|.+|+-+++.++.+|. +|..+++.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4899999999999999999999999 899998764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.40  E-value=0.12  Score=43.21  Aligned_cols=76  Identities=17%  Similarity=0.189  Sum_probs=45.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      .+.+|||+|+ |.+|...++.+...|. .+|+++.|++.+...-+.-.....+ .+-   .+ .+.+.+.. .++|+++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~-~D~---~~-~~~~~~~~-~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEV-VDF---EK-LDDYASAF-QGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEE-CCG---GG-GGGGGGGG-SSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeee-ecc---cc-cccccccc-cccccccc
Confidence            3468999999 9999998888877773 4899999876443221111122221 111   11 11122221 27999999


Q ss_pred             CCCC
Q 017335          280 CIGL  283 (373)
Q Consensus       280 ~~g~  283 (373)
                      |.|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9885

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=90.40  E-value=0.14  Score=45.28  Aligned_cols=37  Identities=19%  Similarity=0.160  Sum_probs=33.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      .+++|||+|+ |-+|...++.+...|+ +|+++++++.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCc
Confidence            5799999998 9999999999999999 89999987654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.36  E-value=0.18  Score=39.48  Aligned_cols=36  Identities=25%  Similarity=0.365  Sum_probs=30.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~  237 (373)
                      +|++|+|+|+|..|+.++..++.++.+ +|+.+++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999888888743 788888665

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.22  Score=37.29  Aligned_cols=34  Identities=15%  Similarity=0.027  Sum_probs=31.2

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .++|+|+|+|.+|+-++..++.+|. +|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4799999999999999999999999 999999864

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.27  E-value=0.38  Score=41.90  Aligned_cols=32  Identities=19%  Similarity=0.113  Sum_probs=29.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      +++||+|+ |-+|...+..+...|+ +|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57999999 9999999999999999 99999974

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.22  E-value=0.16  Score=43.50  Aligned_cols=36  Identities=22%  Similarity=0.251  Sum_probs=31.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +...+|+|+|+|.-|+.++..+...|. +|.+++.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456789999999999999999999999 999998754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.22  E-value=0.33  Score=42.52  Aligned_cols=75  Identities=15%  Similarity=0.177  Sum_probs=45.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  283 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~  283 (373)
                      +|||+|+ |-+|...++.+...|.-+|+++++...+...+.+..--..+..+-....++.+.+.    .++|+|+.+.+.
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~----~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV----KKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH----HHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH----hCCCcccccccc
Confidence            5899998 99999999888777833899998766554443322111233322111133333222    268999987764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.19  E-value=0.2  Score=37.70  Aligned_cols=36  Identities=22%  Similarity=0.274  Sum_probs=32.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +..++++|+|+|.+|+-++++.+.+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 899998654

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=90.19  E-value=1.3  Score=35.01  Aligned_cols=100  Identities=17%  Similarity=0.259  Sum_probs=59.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHC---CCCeEEEEcC--ChhHHHHHHHc----CC---c------e-EEcCCCC---CCcc
Q 017335          204 STVAIFGLGAVGLAVAEGARLN---RASKIIGVDI--NPEKFEIGKKF----GI---T------D-FINPATC---GDKT  261 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~---G~~~Vi~~~~--~~~~~~~~~~l----ga---~------~-vi~~~~~---~~~~  261 (373)
                      .+|.|.|-|-+|+++.+.+-..   .+ +|+++-.  +.+...++-+.    |.   +      . +++.+..   ...+
T Consensus         1 ~kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           1 ARVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            3689999999999998877542   35 7777643  23445454321    21   0      0 1111100   0000


Q ss_pred             HHHHHHHhc-CC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          262 VSQVIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       262 ~~~~i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                          ..++. .. ++|+|+||+|.-.+.+.+...+..| .+-|.+..+..
T Consensus        80 ----p~~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~k  124 (169)
T d1hdgo1          80 ----PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPAK  124 (169)
T ss_dssp             ----GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCB
T ss_pred             ----hhhCCccccCCCEEEEecceeccccchhhhccCC-CceEEEecccC
Confidence                01111 12 8999999999866678888889886 77777766443

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.13  E-value=1  Score=39.42  Aligned_cols=98  Identities=14%  Similarity=0.145  Sum_probs=62.4

Q ss_pred             hCCCCCCEEEEECC--ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH------cCC--ceEEcCCCCCCccHHHHHH
Q 017335          198 AGVEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK------FGI--TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       198 ~~~~~~~~VlI~G~--G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~------lga--~~vi~~~~~~~~~~~~~i~  267 (373)
                      ..+.+|++||-+.+  |+.++   .++ ..|+..|+.++.++...+.+++      ++.  ..++..      +..+.+.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl---~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~------d~~~~l~  209 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSV---AAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM------DVFDYFK  209 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHH---HHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES------CHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHH---HHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc------cHHHHHH
Confidence            45778999999855  55443   333 4677789999999988887753      222  123433      3333343


Q ss_pred             Hhc-CC-CccEEE-ECCCC--------------HHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMT-DG-GADYCF-ECIGL--------------TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~-~~-~~d~vi-d~~g~--------------~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ... .+ .||+|| |....              ...+..++++|++| |.++.+..
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~sc  264 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTN  264 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            332 23 799999 43211              12567788999997 99887754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.07  E-value=0.15  Score=41.85  Aligned_cols=86  Identities=20%  Similarity=0.168  Sum_probs=57.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+.+|.|+|.|.+|...+++++.+|. +|++.++...+...   ..    +..     .++.+.+.     ..|+|.-++
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~---~~----~~~-----~~l~~l~~-----~~D~v~~~~  105 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGDH---PD----FDY-----VSLEDLFK-----QSDVIDLHV  105 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSCC---TT----CEE-----CCHHHHHH-----HCSEEEECC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhhh---cc----hhH-----HHHHHHHH-----hcccceeee
Confidence            46899999999999999999999999 99999976432110   00    000     12222221     367888765


Q ss_pred             CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....     .=...++.|+++ ..++..+.
T Consensus       106 plt~~T~~li~~~~l~~mk~~-a~lIN~aR  134 (199)
T d1dxya1         106 PGIEQNTHIINEAAFNLMKPG-AIVINTAR  134 (199)
T ss_dssp             CCCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred             cccccccccccHHHhhccCCc-eEEEeccc
Confidence            5322     123577889997 88888865

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.02  E-value=0.15  Score=38.24  Aligned_cols=37  Identities=19%  Similarity=0.321  Sum_probs=32.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      +..++++|+|+|.+|+-++++++.+|. +|..+.+++.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            346899999999999999999999999 9999997754

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.99  E-value=0.23  Score=42.58  Aligned_cols=105  Identities=11%  Similarity=-0.043  Sum_probs=59.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC-----CCC-eEEEEcCChhHHHHHHHc-CC-----ceEEcCCCCCCccHHHHHH
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLN-----RAS-KIIGVDINPEKFEIGKKF-GI-----TDFINPATCGDKTVSQVIK  267 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~-----G~~-~Vi~~~~~~~~~~~~~~l-ga-----~~vi~~~~~~~~~~~~~i~  267 (373)
                      .+++-+||-+|+|. |..+..+++.+     +.. ++++++.++...+.+++. .-     ...++......+++.....
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML  116 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence            45555899999865 44444444431     221 678999999888887652 11     1112112200012222222


Q ss_pred             HhcC-CCccEEEECCC-----C-HHHHHHHHHHhccCCceEEEEcc
Q 017335          268 EMTD-GGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       268 ~~~~-~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .... +.||+|+-.-.     . ..++..+.+.|+++ |.++....
T Consensus       117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            2222 38999996322     2 34788999999997 98877643

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=89.96  E-value=0.85  Score=38.61  Aligned_cols=34  Identities=18%  Similarity=0.056  Sum_probs=29.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      -.+|||+|+ |.+|...+..+...|. +|+++.|++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            356999998 9999999998888998 899988854

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=89.83  E-value=0.16  Score=42.75  Aligned_cols=34  Identities=26%  Similarity=0.405  Sum_probs=29.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      +.|||+|+ +++|++.++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            46899998 8999999999999999 9999997653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.74  E-value=0.87  Score=40.57  Aligned_cols=32  Identities=31%  Similarity=0.292  Sum_probs=28.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      |.+|||+|+ |-+|..++..+...|+ +|+++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn   33 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN   33 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence            679999998 9999999999999999 9999973

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=89.74  E-value=2.3  Score=32.77  Aligned_cols=131  Identities=9%  Similarity=0.062  Sum_probs=72.8

Q ss_pred             EEEEECCChHHHH-HHHHHHHC-CCCeEEE-EcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          205 TVAIFGLGAVGLA-VAEGARLN-RASKIIG-VDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       205 ~VlI~G~G~vG~~-a~~la~~~-G~~~Vi~-~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      +|.|+|.|.+|.- .+...+.. ++ ++++ .++++++.+. .++++.. .++       ++ +.+   . ..+|+|+.|
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~-~~~-------~~-~~l---~-~~~D~V~I~   68 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIP-YAD-------SL-SSL---A-ASCDAVFVH   68 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCC-BCS-------SH-HHH---H-TTCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhccccc-ccc-------cc-hhh---h-hhccccccc
Confidence            6889999999964 56666544 67 6555 5566666544 4567754 221       22 122   1 268999999


Q ss_pred             CCCHHHHHHHHHHhccCCceEEEEcccCCCCcccc-CHHHHhh--CcEEEEeecCCCCch-hHHHHHHHHHHcCCCC
Q 017335          281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPR-SDIATLAQKYLDKVHL  353 (373)
Q Consensus       281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~-~~~~~~~~~~~~g~i~  353 (373)
                      +......+.+..++..  |+=+++.-+.....-.. ....+..  +..+.-..  .+... ...+.+.+++++|.+.
T Consensus        69 tp~~~h~~~~~~al~~--gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~--~~r~~~~~~~~~~~~i~~g~ig  141 (164)
T d1tlta1          69 SSTASHFDVVSTLLNA--GVHVCVDKPLAENLRDAERLVELAARKKLTLMVGF--NRRFFVGCARHFIECVQNQTVP  141 (164)
T ss_dssp             SCTTHHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC--GGGGHHHHHHHHHHHHHHTCCC
T ss_pred             ccchhccccccccccc--cceeeccccccCCHHHHHHHHHHHHHcCCcEEEEe--ccccCHHHHHHHHHHHHCCCCC
Confidence            9877768888888887  44455654222111111 1111222  44333221  11112 2234577788888875

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.55  E-value=0.22  Score=40.14  Aligned_cols=84  Identities=24%  Similarity=0.299  Sum_probs=58.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .|++|.|+|.|.+|...+++++.+|. +|++.+++...       +.....       .++.    ++. ...|+|+.+.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~-------~~l~----ell-~~sDiv~~~~  100 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT-------NSLE----EAL-REARAAVCAL  100 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB-------SCSH----HHH-TTCSEEEECC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee-------echh----hhh-hccchhhccc
Confidence            47899999999999999999999999 99999976432       111111       1221    121 1678888766


Q ss_pred             CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ....     .=...++.++++ ..++.+|.
T Consensus       101 pl~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         101 PLNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             ccccccccccccceeeecccc-ceEEeccc
Confidence            5321     124677888996 88888864

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.53  E-value=0.67  Score=40.65  Aligned_cols=113  Identities=15%  Similarity=0.137  Sum_probs=71.8

Q ss_pred             hCCCCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335          198 AGVEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       198 ~~~~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      ..-+...++.|+|+|..+...++.+. ....++|.+.++++++.+.+.    ..+.....+.        .+.+     .
T Consensus       120 la~~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~--------~~a~-----~  186 (320)
T d1omoa_         120 LARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP--------AEEA-----S  186 (320)
T ss_dssp             HSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC--------HHHH-----T
T ss_pred             hccCCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch--------hhhh-----c
Confidence            33345578899999999988776665 467889999999998866553    3444333221        1122     2


Q ss_pred             CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEE
Q 017335          273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVC  327 (373)
Q Consensus       273 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~  327 (373)
                      ++|+|+-|+.+..-+ --.+.+++| -.+..+|.+... .-+++... +...++.
T Consensus       187 ~aDiV~taT~s~~P~-~~~~~l~~G-~hv~~iGs~~p~-~~Eld~~~-~~~a~~~  237 (320)
T d1omoa_         187 RCDVLVTTTPSRKPV-VKAEWVEEG-THINAIGADGPG-KQELDVEI-LKKAKIV  237 (320)
T ss_dssp             SSSEEEECCCCSSCC-BCGGGCCTT-CEEEECSCCSTT-CCCBCHHH-HHTEEEE
T ss_pred             cccEEEEeccCcccc-cchhhcCCC-CeEeecCCcccc-ccccCHHH-hhcCceE
Confidence            689999888764411 112468997 999999975442 33566543 3333443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.50  E-value=0.49  Score=36.57  Aligned_cols=39  Identities=28%  Similarity=0.362  Sum_probs=32.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEK  239 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~  239 (373)
                      ..+.+|.|+|+|.+|...+..+...+ +.+++.+|.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            35678999999999999888888777 4589999988876

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=89.47  E-value=1.2  Score=35.19  Aligned_cols=100  Identities=21%  Similarity=0.308  Sum_probs=59.1

Q ss_pred             EEEEECCChHHHHHHHHHHHC----CCCeEEEEcC--ChhHHHHHHHc----C---Cc-------eEEcCCCCCCccHH-
Q 017335          205 TVAIFGLGAVGLAVAEGARLN----RASKIIGVDI--NPEKFEIGKKF----G---IT-------DFINPATCGDKTVS-  263 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~----G~~~Vi~~~~--~~~~~~~~~~l----g---a~-------~vi~~~~~~~~~~~-  263 (373)
                      +|.|.|-|-+|+++.+.+-..    .. +|+++..  +.+...++-+.    |   ..       .+++.+.   -.+. 
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~---i~i~~   78 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDK---IRVDA   78 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEE---EEEEC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEE---EEEEe
Confidence            588999999999998876543    23 5666653  33445554321    1   10       1121111   0000 


Q ss_pred             -HHHHHhc-CC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          264 -QVIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       264 -~~i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                       ....++. .. ++|+|+||+|.-...+.+...|..| .+-|.+..+..
T Consensus        79 ~~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~~  126 (173)
T d1obfo1          79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPGG  126 (173)
T ss_dssp             CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCCC
T ss_pred             cCCHHHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCCC
Confidence             0011222 23 8999999999766577888889886 88787876443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.22  E-value=0.81  Score=40.05  Aligned_cols=31  Identities=19%  Similarity=0.097  Sum_probs=27.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      +.|||+|+ |-+|...+..+...|. +|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            57999998 9999999999888999 8999864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.18  E-value=0.57  Score=37.15  Aligned_cols=95  Identities=16%  Similarity=0.264  Sum_probs=65.0

Q ss_pred             hccchhhhhHHHHHHHHhCC-CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCC
Q 017335          181 CLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  258 (373)
Q Consensus       181 a~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~  258 (373)
                      +.+||.....+. +++..++ -.|++|+|+|. .-+|.-.+.++...|+ +|..+.+....                   
T Consensus        17 ~~~PcTp~aii~-lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~-------------------   75 (170)
T d1a4ia1          17 CFIPCTPKGCLE-LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAH-------------------   75 (170)
T ss_dssp             CCCCHHHHHHHH-HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSS-------------------
T ss_pred             CCCCChHHHHHH-HHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccccc-------------------
Confidence            445655555554 4444454 47999999998 5799999999999999 88887754222                   


Q ss_pred             CccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335          259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  307 (373)
Q Consensus       259 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~  307 (373)
                         ..+.+     ...|+++-++|.+..+.  -++++++ ..++++|..
T Consensus        76 ---l~~~~-----~~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          76 ---LDEEV-----NKGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             ---HHHHH-----TTCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             ---HHHHH-----hhccchhhccccccccc--cccccCC-CeEeccCcc
Confidence               21111     15788888888766332  3578886 888888863

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.17  E-value=0.18  Score=41.08  Aligned_cols=31  Identities=16%  Similarity=0.303  Sum_probs=28.4

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      |+|+|+|..|+.++..+...|. +|.++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7899999999999999989998 999999875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.97  E-value=1.7  Score=32.13  Aligned_cols=92  Identities=13%  Similarity=0.079  Sum_probs=61.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  284 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~  284 (373)
                      .++|.|.|.+|...+..++  +. .|++++.++++.+.++..|.. ++..+.    .-.+.+++..-..++.++-++...
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~-~i~Gd~----~~~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGAN-FVHGDP----TRVSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCE-EEESCT----TSHHHHHHTTCTTCSEEEECCSSH
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCcc-cccccc----CCHHHHHHhhhhcCcEEEEeccch
Confidence            5889999999998877664  44 678889899998888888874 444443    112334444333789999888765


Q ss_pred             H---HHHHHHHHhccCCceEEEEc
Q 017335          285 S---VMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       285 ~---~~~~~~~~l~~~~G~~v~~G  305 (373)
                      .   .+....+.+.+. .+++..-
T Consensus        74 ~~n~~~~~~~r~~~~~-~~iia~~   96 (129)
T d2fy8a1          74 SETIHCILGIRKIDES-VRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHHHCSS-SCEEEEC
T ss_pred             hhhHHHHHHHHHHCCC-ceEEEEE
Confidence            5   233444556665 6666554

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.91  E-value=0.19  Score=41.96  Aligned_cols=32  Identities=31%  Similarity=0.416  Sum_probs=28.6

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      |+|+|+|+.|+.++..+...|. +|+++++++.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            7899999999998888888999 9999997654

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.78  E-value=0.16  Score=43.35  Aligned_cols=45  Identities=18%  Similarity=0.034  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      +...|.++|-+|+|+ |...+..+...+. +|+++|.++...+.+++
T Consensus        51 g~~~g~~vLDiGcG~-g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGSGP-TVYQLLSACSHFE-DITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETCTT-CCGGGTTGGGGCS-EEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEeccCC-CHHHHHHhcccCC-eEEEEeCCHHHHHHHHH
Confidence            456789999999976 5444333434444 99999999999998875

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=88.72  E-value=0.052  Score=46.57  Aligned_cols=99  Identities=14%  Similarity=0.065  Sum_probs=63.4

Q ss_pred             HHHHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHH----HHcCC-ce--EEcCCCCCCccHHHH
Q 017335          194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIG----KKFGI-TD--FINPATCGDKTVSQV  265 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~----~~lga-~~--vi~~~~~~~~~~~~~  265 (373)
                      +.+...+....+||-+|+|. |..+..+++.. +. ++++++. ++..+.+    ++.|. +.  +...+      +.  
T Consensus        73 ~~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d------~~--  141 (256)
T d1qzza2          73 PADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLADRVTVAEGD------FF--  141 (256)
T ss_dssp             HHHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC------TT--
T ss_pred             HHhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCc-EEEEecC-hHHHHHHHHHHhhcCCcceeeeeeee------cc--
Confidence            44556677888999999877 88899999987 45 8999996 4444443    33342 22  22211      11  


Q ss_pred             HHHhcCCCccEEEEC-----CCCH---HHHHHHHHHhccCCceEEEEcc
Q 017335          266 IKEMTDGGADYCFEC-----IGLT---SVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       266 i~~~~~~~~d~vid~-----~g~~---~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                        +..+.++|+|+-.     .+.+   ..+..+.+.|++| |+++.+..
T Consensus       142 --~~~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~  187 (256)
T d1qzza2         142 --KPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDR  187 (256)
T ss_dssp             --SCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             --ccccccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEe
Confidence              1112378988843     1212   3477899999997 99998764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.55  E-value=0.2  Score=42.15  Aligned_cols=33  Identities=24%  Similarity=0.205  Sum_probs=29.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .|+|+|+|+.|+.++..+...|. +|.++++++.
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999999999998 8999998764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.47  E-value=0.25  Score=43.37  Aligned_cols=35  Identities=14%  Similarity=0.211  Sum_probs=31.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .++|+|+|+|..|+.++..+...|. +|.+++.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            5789999999999999999998898 9999997653

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.34  E-value=2.7  Score=35.84  Aligned_cols=102  Identities=19%  Similarity=0.142  Sum_probs=66.7

Q ss_pred             HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcCCCC---------------
Q 017335          195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATC---------------  257 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~~~~---------------  257 (373)
                      .+...++++.+|+..++|.-|.+++..++.+|.+-++++..  ++.+...++.+|++-+......               
T Consensus        53 ~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~  132 (302)
T d1fcja_          53 EKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVAS  132 (302)
T ss_dssp             HHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhh
Confidence            45566788888777788999999999999999854444433  4466777788887544322110               


Q ss_pred             -----------CC--------ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhcc
Q 017335          258 -----------GD--------KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE  296 (373)
Q Consensus       258 -----------~~--------~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~  296 (373)
                                 .+        ..+..++.+..++.+|+++-++|+..++......++.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk~  190 (302)
T d1fcja_         133 DPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKG  190 (302)
T ss_dssp             STTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHT
T ss_pred             hccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeeee
Confidence                       11        1133444555555789999998886666666666654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.31  E-value=0.61  Score=39.25  Aligned_cols=36  Identities=42%  Similarity=0.352  Sum_probs=31.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      .--.|.+|+|.|.|.+|..+++++...|+ +|++++.
T Consensus        27 ~~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            33478999999999999999999999999 8888774

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=88.30  E-value=0.77  Score=37.85  Aligned_cols=90  Identities=21%  Similarity=0.259  Sum_probs=58.7

Q ss_pred             EEEEECCChHHHH-HHHHHHH-CCCCeEE-EEcCChhHHHHH-HHcCCc--eEEcCCCCCCccHHHHHHHhcCC-CccEE
Q 017335          205 TVAIFGLGAVGLA-VAEGARL-NRASKII-GVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMTDG-GADYC  277 (373)
Q Consensus       205 ~VlI~G~G~vG~~-a~~la~~-~G~~~Vi-~~~~~~~~~~~~-~~lga~--~vi~~~~~~~~~~~~~i~~~~~~-~~d~v  277 (373)
                      +|.|+|+|.+|.. .+...+. -++ +|+ ++++++++.+.+ +++|..  .+..+++         +.++... .+|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d---------~~ell~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN---------FDKIAKDPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS---------GGGGGGCTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc---------hhhhcccccceee
Confidence            7899999999863 4444443 367 666 467777776554 556642  2322222         2233333 89999


Q ss_pred             EECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          278 FECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       278 id~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      +-++....-.+.+.+++..  |+=+++.-
T Consensus       105 ~I~tp~~~H~~~~~~al~~--gk~v~~EK  131 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA--GKHVMCEK  131 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred             eeccchhhhhhHHHHhhhc--chhhhcCC
Confidence            9998877778888888887  56666754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.15  E-value=0.36  Score=39.35  Aligned_cols=40  Identities=33%  Similarity=0.577  Sum_probs=35.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      +|.|+|.|-+|+..+..+...|. +|+++|.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            47899999999998888888899 99999999998887764

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.15  E-value=0.077  Score=44.87  Aligned_cols=45  Identities=22%  Similarity=0.082  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      ...++.+||=+|+|. |..+..+++. +..+|++++.++...+.+++
T Consensus        48 ~~~~g~~vLDlGcG~-G~~~~~~~~~-~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLIDIGSGP-TIYQVLAACD-SFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEESSCTT-CCGGGTTGGG-TEEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCC-CHhHHHHhcc-ccCcEEEecCCHHHHHHHHH
Confidence            356788999999875 5555555554 44489999999998888864

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.13  E-value=0.21  Score=38.71  Aligned_cols=41  Identities=17%  Similarity=0.079  Sum_probs=32.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIG  243 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~  243 (373)
                      .|.+|||+|+|.+|..-+..+...|+ +|.+++.  +++-...+
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~~~   54 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKF   54 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCHHHHHHH
Confidence            58999999999999999999999999 8888754  34444443

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.12  E-value=0.36  Score=39.85  Aligned_cols=98  Identities=20%  Similarity=0.274  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCce---EEcCCCCCCccHHHHHHHhcC-
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITD---FINPATCGDKTVSQVIKEMTD-  271 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~---vi~~~~~~~~~~~~~i~~~~~-  271 (373)
                      ...++||-+|.+. |..++.+|+.+.. .+|+.++.+++..+.++    +.|...   ++..+.   .++.+.+.+..+ 
T Consensus        55 ~kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~---~e~l~~l~~~~~~  130 (214)
T d2cl5a1          55 YSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGAS---QDLIPQLKKKYDV  130 (214)
T ss_dssp             HCCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH---HHHGGGHHHHSCC
T ss_pred             hCCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccc---cccccchhhcccc
Confidence            4457999999865 6677788887632 39999999998777664    456422   232221   222222332222 


Q ss_pred             CCccEEE-ECCCCHH----HHHHHHHHhccCCceEEE
Q 017335          272 GGADYCF-ECIGLTS----VMNDAFNSSREGWGKTVI  303 (373)
Q Consensus       272 ~~~d~vi-d~~g~~~----~~~~~~~~l~~~~G~~v~  303 (373)
                      +.+|+|| |..-...    .+..+++.|++| |.++.
T Consensus       131 ~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv~  166 (214)
T d2cl5a1         131 DTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLLA  166 (214)
T ss_dssp             CCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             cccceeeecccccccccHHHHHHHhCccCCC-cEEEE
Confidence            2799988 4332221    134455678997 87654

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=88.11  E-value=0.37  Score=38.96  Aligned_cols=90  Identities=18%  Similarity=0.260  Sum_probs=60.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  279 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid  279 (373)
                      +.++++||-+|+|. |..+..+     . +++++|.+++..+.+++-+.. ++..+.   .++     ...++.||+|+.
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~-~~~~d~---~~l-----~~~~~~fD~I~~   97 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVF-VLKGTA---ENL-----PLKDESFDFALM   97 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCE-EEECBT---TBC-----CSCTTCEEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhcccccccccc-cccccc---ccc-----cccccccccccc
Confidence            46677899999864 5444443     2 678999999999999876653 333332   111     112237999996


Q ss_pred             CCC-----C-HHHHHHHHHHhccCCceEEEEcc
Q 017335          280 CIG-----L-TSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       280 ~~g-----~-~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      ...     . ...+..+.+.|++| |+++....
T Consensus        98 ~~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          98 VTTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             ESCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            422     2 33578999999997 99887643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.11  E-value=0.16  Score=42.76  Aligned_cols=32  Identities=31%  Similarity=0.396  Sum_probs=28.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            48999999999999999999999 899999753

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=87.78  E-value=0.25  Score=39.07  Aligned_cols=30  Identities=23%  Similarity=0.123  Sum_probs=27.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      .|+|+|+|+.|+.++..+...|. +|..+++
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            48899999999999999999999 7888875

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.67  E-value=0.35  Score=35.94  Aligned_cols=35  Identities=17%  Similarity=0.171  Sum_probs=31.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .+.+|+|+|+|.+|+-+++.+..+|. +|..+++++
T Consensus        31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            45799999999999999999999999 899998764

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=87.67  E-value=1.7  Score=33.25  Aligned_cols=38  Identities=26%  Similarity=0.314  Sum_probs=31.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHH
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKF  240 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~  240 (373)
                      ..+|.|+|+|.+|...+..+...| +.+++.+|.++++.
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            458999999999999887777766 45899999888653

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.60  E-value=1.8  Score=37.59  Aligned_cols=109  Identities=21%  Similarity=0.122  Sum_probs=66.5

Q ss_pred             HHHhCCCCCCEEEEE-CCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcCCCC--------------
Q 017335          195 WKVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATC--------------  257 (373)
Q Consensus       195 ~~~~~~~~~~~VlI~-G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~~~~--------------  257 (373)
                      .+...++++...+|. .+|..|++.+.+++.+|++-++++..  ++.|.+.++.+|++-++.....              
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence            445556666555555 56999999999999999853443333  4567888888998655432210              


Q ss_pred             -----------CCc--------cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHh---ccCCceEEEE
Q 017335          258 -----------GDK--------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS---REGWGKTVIL  304 (373)
Q Consensus       258 -----------~~~--------~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l---~~~~G~~v~~  304 (373)
                                 .+.        ....++.+...+.+|.++-++|+..++.-++..+   .+. -+++-+
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igv  203 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGV  203 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeecc
Confidence                       000        1222444444447899998888776566555444   443 455443

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.58  E-value=0.44  Score=37.10  Aligned_cols=37  Identities=19%  Similarity=0.210  Sum_probs=31.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .-+++|+|+|+|.+|.-++..+...|++.|..+.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3477899999999999999999999997788887643

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=87.52  E-value=2.2  Score=33.49  Aligned_cols=100  Identities=23%  Similarity=0.324  Sum_probs=60.6

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCCeEEEEcC---ChhHHHHHHHc----C---Cc-------eEEcCCCCCCccH--HH
Q 017335          205 TVAIFGLGAVGLAVAEGARLN-RASKIIGVDI---NPEKFEIGKKF----G---IT-------DFINPATCGDKTV--SQ  264 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~---~~~~~~~~~~l----g---a~-------~vi~~~~~~~~~~--~~  264 (373)
                      +|.|.|-|-+|+++...+-.. .. +|+++-.   +.+...++-+.    |   .+       -+++.+.   -.+  ..
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~---I~~~~~~   78 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNP---ITIFQER   78 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEE---EEEECCS
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEE---EEEEECC
Confidence            688999999999998777654 46 7777643   33555555432    2   10       0111110   000  00


Q ss_pred             HHHHhc-CC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          265 VIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       265 ~i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      ...++. .. ++|+|+||+|.-...+.+...+..| .+-+.+..+..
T Consensus        79 ~p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~~  124 (169)
T d1u8fo1          79 DPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPSA  124 (169)
T ss_dssp             SGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCCS
T ss_pred             ChhhCCccccCCCEEEEecceeccHHHHHHHHhcC-CceEeeccccc
Confidence            011222 23 8999999999866677888888886 87777766433

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.46  E-value=0.3  Score=42.24  Aligned_cols=43  Identities=14%  Similarity=0.125  Sum_probs=33.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFG  247 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lg  247 (373)
                      ++|||+|+ |-+|..++..+...|+ +|+++++...  +.+.++.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhc
Confidence            58999998 9999999998888899 9999987542  334444444

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.38  E-value=1.4  Score=38.34  Aligned_cols=101  Identities=18%  Similarity=0.246  Sum_probs=60.5

Q ss_pred             HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHH----HHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335          196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~----~~lga~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      .....++|++||=+-+++=|. +.+++..++ -..|++.+.++.|...+    +++|...++....   ...  .+ ...
T Consensus       110 ~~l~~~~g~~vlD~CAapGgK-t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~---d~~--~~-~~~  182 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAPGGK-TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS---SSL--HI-GEL  182 (313)
T ss_dssp             HHHCCCTTCEEEECCSSCSHH-HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS---CGG--GG-GGG
T ss_pred             hcccCCccceeeecccchhhh-hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccc---ccc--cc-ccc
Confidence            345789999998884433122 334444433 22799999999887665    4577655443322   111  00 122


Q ss_pred             CCCccEEE-E--CCCCH-------------------------HHHHHHHHHhccCCceEEEE
Q 017335          271 DGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       271 ~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .+.||.|+ |  |+|..                         ..+..+++++++| |++|-.
T Consensus       183 ~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYs  243 (313)
T d1ixka_         183 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYS  243 (313)
T ss_dssp             CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEe
Confidence            33789888 5  55541                         1467788889997 876533

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.23  E-value=1.2  Score=33.39  Aligned_cols=88  Identities=20%  Similarity=0.280  Sum_probs=55.3

Q ss_pred             CCCEEEEECCCh--HH---------HHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc-CCCCCCccHHHHHHHh
Q 017335          202 VGSTVAIFGLGA--VG---------LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN-PATCGDKTVSQVIKEM  269 (373)
Q Consensus       202 ~~~~VlI~G~G~--vG---------~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~-~~~~~~~~~~~~i~~~  269 (373)
                      .-++|||+|+|+  +|         ..++..+|..|+ +++.+.++++.-..-..+ +++++- +-.   .+.+..+.+.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePlt---~e~v~~Ii~~   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPIH---WEVVRKIIEK   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCCC---HHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecCC---HHHHHHHHHH
Confidence            347899999875  33         445666677899 899999998875432222 455543 222   2222222222


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHHhcc
Q 017335          270 TDGGADYCFECIGLTSVMNDAFNSSRE  296 (373)
Q Consensus       270 ~~~~~d~vid~~g~~~~~~~~~~~l~~  296 (373)
                        .+.|.|+-+.|+...++.+.++.+.
T Consensus        81 --E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          81 --ERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             --HCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             --hCcCCeEEEeeeehHhHHHHHHHHc
Confidence              2789999899988767777666544

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.09  E-value=0.25  Score=40.27  Aligned_cols=32  Identities=25%  Similarity=0.169  Sum_probs=28.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      -|+|+|+|+.|+.++..+..+|. +|++++..+
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG   36 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47899999999999999999999 899998653

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=86.86  E-value=0.15  Score=40.95  Aligned_cols=35  Identities=20%  Similarity=0.126  Sum_probs=30.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      ++..|+|+|+|+.|+.++..+..+|. +|+++++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            35679999999999999999999999 888887543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.83  E-value=0.28  Score=38.68  Aligned_cols=34  Identities=32%  Similarity=0.328  Sum_probs=27.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDI  235 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~  235 (373)
                      ++++|+|+|+|.+|+-++..++.+|.+ +|+....
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEecC
Confidence            578999999999999999999999974 3444443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=86.82  E-value=0.57  Score=36.47  Aligned_cols=40  Identities=18%  Similarity=0.203  Sum_probs=33.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHH
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF  240 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~  240 (373)
                      +...+|.|+|+|.+|...+.++...+..+++.+|.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            4567899999999999888888888876899999887653

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.63  E-value=0.32  Score=42.30  Aligned_cols=33  Identities=18%  Similarity=0.179  Sum_probs=29.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .|+|+|+|..|++++..++..|. .|+++++.++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            68999999999999999999999 8999997653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.63  E-value=3.4  Score=32.67  Aligned_cols=105  Identities=17%  Similarity=0.279  Sum_probs=67.3

Q ss_pred             HHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceEEcCCCCCCccHHHHHHHhc
Q 017335          194 AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMT  270 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~vi~~~~~~~~~~~~~i~~~~  270 (373)
                      ++....+++|.+++ -+. |+=|+ ...+++. +. +|+++|++++....+++.-.  -.+++..-   .++.+.+....
T Consensus        10 vl~~l~~~~g~~~v-D~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f---~~~~~~l~~~~   82 (182)
T d1wg8a2          10 ALDLLAVRPGGVYV-DATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAALG   82 (182)
T ss_dssp             HHHHHTCCTTCEEE-ETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHTT
T ss_pred             HHHhcCCCCCCEEE-EeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHH---HHHHHHHHHcC
Confidence            34556788898754 444 54344 3444554 44 99999999999888876432  23444443   56666655554


Q ss_pred             CCCccEEEECCCCHH---------------HHHHHHHHhccCCceEEEEcc
Q 017335          271 DGGADYCFECIGLTS---------------VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       271 ~~~~d~vid~~g~~~---------------~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .+.+|.|+=-.|-..               .++..++.++++ |+++.+..
T Consensus        83 ~~~vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~f  132 (182)
T d1wg8a2          83 VERVDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAF  132 (182)
T ss_dssp             CSCEEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CCccCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEec
Confidence            447998883334322               367788889997 99887765

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.61  E-value=0.7  Score=40.67  Aligned_cols=74  Identities=15%  Similarity=0.195  Sum_probs=45.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  280 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~  280 (373)
                      .+-+|||+|+ |-+|...+..+...|. +|+++++...... ............+-   .+..+ +.+.. .++|.|+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~D~---~~~~~-~~~~~-~~~d~Vih~   86 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLVDL---RVMEN-CLKVT-EGVDHVFNL   86 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEECCT---TSHHH-HHHHH-TTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEeec---hhHHH-HHHHh-hcCCeEeec
Confidence            4668999998 9999999999999999 9999976443211 11122222222222   22222 22222 278999987


Q ss_pred             CC
Q 017335          281 IG  282 (373)
Q Consensus       281 ~g  282 (373)
                      .+
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.55  E-value=0.98  Score=33.69  Aligned_cols=62  Identities=19%  Similarity=0.186  Sum_probs=50.0

Q ss_pred             HHHHhCCCCCCEEEEE-CCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335          194 AWKVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  255 (373)
Q Consensus       194 ~~~~~~~~~~~~VlI~-G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~  255 (373)
                      .++..+++.-+.++++ ..-..-+.+.+++|.+|..++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            4566777777766665 3345667888899999988999999999999999999999999764

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.52  E-value=2.3  Score=33.31  Aligned_cols=96  Identities=18%  Similarity=0.192  Sum_probs=60.4

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCCeEEEEcC---ChhHHHHHHHc----C---Cc-------eEEc--------CCCCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLN-RASKIIGVDI---NPEKFEIGKKF----G---IT-------DFIN--------PATCG  258 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~---~~~~~~~~~~l----g---a~-------~vi~--------~~~~~  258 (373)
                      +|.|.|-|-+|+++.+.+... .. +|+++-.   +.+...++-+.    |   ..       -+++        .++-.
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            588999999999998887654 46 7777643   34556665432    2   10       0111        11100


Q ss_pred             CccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       259 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      +-+|.    +   .++|+|+||+|.-...+.+...+..| .+-|.+..+..
T Consensus        81 ~i~W~----~---~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~k  123 (166)
T d2b4ro1          81 QIPWG----K---CQVDVVCESTGVFLTKELASSHLKGG-AKKVIMSAPPK  123 (166)
T ss_dssp             GCCHH----H---HTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCS
T ss_pred             Hcccc----c---cCCCEEEEecccccchhhhhhhhccC-CCEEEEecccc
Confidence            01121    1   18999999999776677888889886 87777766443

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=86.49  E-value=0.5  Score=38.06  Aligned_cols=39  Identities=28%  Similarity=0.330  Sum_probs=32.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  245 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~  245 (373)
                      +|.|+|.|-+|+..+.++ +.|. +|+++|.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578899999999877666 4698 99999999998887753

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=86.46  E-value=0.4  Score=41.18  Aligned_cols=37  Identities=27%  Similarity=0.268  Sum_probs=31.9

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       202 ~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.+.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence            5889999997 4  799999999999999 99988876543

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=86.45  E-value=3.5  Score=32.16  Aligned_cols=100  Identities=23%  Similarity=0.267  Sum_probs=59.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CCeEEEEcCCh--hHHHHHHHc----C---Cc-------eEEcCCCCCCccHH--HH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINP--EKFEIGKKF----G---IT-------DFINPATCGDKTVS--QV  265 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~--~~~~~~~~l----g---a~-------~vi~~~~~~~~~~~--~~  265 (373)
                      +|.|.|-|-+|+++.+.+.... + +|+++....  +...++-+.    |   .+       -+++.+..   .+.  +.
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I---~i~~~~~   78 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKI---RVTAERD   78 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEE---EEECCSS
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEE---EEEeCCC
Confidence            5789999999999998877653 5 677766433  333333221    2   10       11221110   000  00


Q ss_pred             HHHhc-CC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335          266 IKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  309 (373)
Q Consensus       266 i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~  309 (373)
                      ..++. .. ++|+|+||+|.-.+.+.+...+..| .+-|.+..+..
T Consensus        79 p~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~~  123 (166)
T d1gado1          79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPSK  123 (166)
T ss_dssp             GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCS
T ss_pred             hHHCCccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeecccc
Confidence            11111 12 8999999999777678888889886 87777776443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.42  E-value=0.46  Score=37.90  Aligned_cols=85  Identities=12%  Similarity=0.038  Sum_probs=48.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCce----EEcCCC-CCCccHHHHHHHhcCCCccEE
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITD----FINPAT-CGDKTVSQVIKEMTDGGADYC  277 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~~----vi~~~~-~~~~~~~~~i~~~~~~~~d~v  277 (373)
                      .|.|+|+|..|.+.+..+...|. +|....+..+  ..+.+.+-.-..    .+.... ....+..+.+     ..+|+|
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~ad~I   75 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-----ENAEVV   75 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-----TTCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-----hccchh
Confidence            58899999999998888888887 8888876433  333332211100    000000 0002222222     268999


Q ss_pred             EECCCCHHHHHHHHHHhcc
Q 017335          278 FECIGLTSVMNDAFNSSRE  296 (373)
Q Consensus       278 id~~g~~~~~~~~~~~l~~  296 (373)
                      +.++.... +...++.+.+
T Consensus        76 i~avps~~-~~~~~~~l~~   93 (180)
T d1txga2          76 LLGVSTDG-VLPVMSRILP   93 (180)
T ss_dssp             EECSCGGG-HHHHHHHHTT
T ss_pred             hcccchhh-hHHHHHhhcc
Confidence            99999766 5555554433

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=86.28  E-value=0.19  Score=39.91  Aligned_cols=82  Identities=21%  Similarity=0.235  Sum_probs=52.9

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCCeEEEE-cCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLN-RASKIIGV-DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  282 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~-~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g  282 (373)
                      +|.|+|.|.+|...+..++.. ++ +++++ ++++++.      ....+....+     .    ... ...+|+|+.|++
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~~-----~----~~~-~~~~D~Vvi~tp   67 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVAD-----V----DKH-ADDVDVLFLCMG   67 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGGG-----G----GGT-TTTCSEEEECSC
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccchh-----h----hhh-ccccceEEEeCC
Confidence            689999999999888877764 56 55554 4443321      1112222211     1    111 137999999999


Q ss_pred             CHHHHHHHHHHhccCCceEEEE
Q 017335          283 LTSVMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       283 ~~~~~~~~~~~l~~~~G~~v~~  304 (373)
                      .....+.+.++|..| -.++..
T Consensus        68 ~~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          68 SATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTTHHHHHHHHHTTT-SEEECC
T ss_pred             CcccHHHHHHHHHCC-CcEEEe
Confidence            877789999999996 666643

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.20  E-value=0.54  Score=34.46  Aligned_cols=35  Identities=9%  Similarity=-0.070  Sum_probs=27.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHC---CCCeEEEEcCCh
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLN---RASKIIGVDINP  237 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~---G~~~Vi~~~~~~  237 (373)
                      ..++++|+|+|.+|.-++.++..+   |. +|..+.+.+
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence            458999999999999887765543   66 888888654

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.84  E-value=0.29  Score=42.72  Aligned_cols=32  Identities=28%  Similarity=0.312  Sum_probs=26.5

Q ss_pred             EEEEECCChHHHHHHHHH-----HHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGA-----RLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la-----~~~G~~~Vi~~~~~~  237 (373)
                      -|+|+|+|+.|++++.++     +..|+ +|+++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            489999999999977776     35799 899999754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.82  E-value=7.2  Score=31.13  Aligned_cols=95  Identities=13%  Similarity=0.172  Sum_probs=56.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH----------HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCc
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK----------FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA  274 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~----------~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~  274 (373)
                      +|++.|.+.+|..+++.+...|. +|.++.+.+++          .+++++.+.. ++..+...++.+.+.+.+.   .+
T Consensus         2 kiv~~~~~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~-~~~~~~~~~~~~~~~i~~~---~~   76 (203)
T d2blna2           2 KTVVFAYHDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAERGIP-VYAPDNVNHPLWVERIAQL---SP   76 (203)
T ss_dssp             EEEEEECHHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHHTCC-EECCSCCCSHHHHHHHHHT---CC
T ss_pred             eEEEEecCHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHcCCc-ceecccccchhhhhhhhhh---cc
Confidence            47788988899999999998998 77765543322          3445556654 4433332335555555543   78


Q ss_pred             cEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335          275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       275 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      |+++-+......-...++ ..+. |.+..-..
T Consensus        77 Dlii~~g~~~ii~~~il~-~~~~-~~iN~H~s  106 (203)
T d2blna2          77 DVIFSFYYRHLIYDEILQ-LAPA-GAFNLHGS  106 (203)
T ss_dssp             SEEEEESCCSCCCHHHHT-TCTT-CEEEEESS
T ss_pred             cceeeeecccchhcccch-hhHH-HHHHHhhh
Confidence            999877654331223333 3353 66654443

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.79  E-value=0.69  Score=33.90  Aligned_cols=37  Identities=14%  Similarity=0.032  Sum_probs=28.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCC--eEEEEcCCh
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDINP  237 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~--~Vi~~~~~~  237 (373)
                      +..++++|+|+|.+|.-++..++.++.+  .|..+.+.+
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            3457999999999999988777766542  688887653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.71  E-value=0.34  Score=39.41  Aligned_cols=31  Identities=19%  Similarity=0.212  Sum_probs=28.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      -|+|+|+|+.|+.++..|..+|. +|.+++++
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            37899999999999999999999 89999865

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.40  E-value=0.32  Score=44.69  Aligned_cols=34  Identities=21%  Similarity=0.396  Sum_probs=30.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .+|||+|+|++|..++..+-+.|++++..+|.+.
T Consensus        38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CCEEEECSSTTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             CeEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            6799999999999999999999999999998743

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.33  E-value=0.34  Score=41.85  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=28.0

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      |+|+|+|..|+.++..++..|. +|.+++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999999 899998654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.01  E-value=0.42  Score=39.05  Aligned_cols=32  Identities=25%  Similarity=0.180  Sum_probs=28.1

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      -|+|+|+|+.|+.++..|..+|. +|++++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47899999999999999999999 899998654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.98  E-value=0.87  Score=35.20  Aligned_cols=38  Identities=16%  Similarity=0.207  Sum_probs=32.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  239 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~  239 (373)
                      |...|.|+|+|.+|...+.++...+..+++.+|.++++
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            45689999999999998888888888899999987765

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=84.92  E-value=0.42  Score=40.18  Aligned_cols=32  Identities=16%  Similarity=0.152  Sum_probs=28.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .|+|+|+|.+|+.++..+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999998888888898 999999764

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.84  E-value=0.44  Score=38.61  Aligned_cols=30  Identities=23%  Similarity=0.203  Sum_probs=27.2

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      |+|+|+|+.|+.++..|...|. +|.++++.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            7888999999999999999999 89999765

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=84.63  E-value=4.1  Score=31.95  Aligned_cols=98  Identities=17%  Similarity=0.220  Sum_probs=55.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCC---CCeEEEEcCCh--hHHHHHHHc----C---Cc-------e-EEcCCCC---CCcc
Q 017335          205 TVAIFGLGAVGLAVAEGARLNR---ASKIIGVDINP--EKFEIGKKF----G---IT-------D-FINPATC---GDKT  261 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G---~~~Vi~~~~~~--~~~~~~~~l----g---a~-------~-vi~~~~~---~~~~  261 (373)
                      +|.|.|-|-+|+++.+.+....   . +|+++-...  +...++-+.    |   .+       . ++|.+..   ...+
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCSSCSE-EEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCCE-EEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            5889999999999998765433   4 566654322  333333221    2   11       0 1221110   0000


Q ss_pred             HHHHHHHhc-CC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335          262 VSQVIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  308 (373)
Q Consensus       262 ~~~~i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~  308 (373)
                          ..++. .. ++|+|+||+|.-...+.+...|..| .+-|.+..+.
T Consensus        81 ----p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~G-akkViiSAP~  124 (172)
T d1rm4a1          81 ----PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAG-AKKVLITAPG  124 (172)
T ss_dssp             ----GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTT-CSCEEESSCC
T ss_pred             ----hHHCChhhcCCCEEEecCceEccHHHHHHHHhcC-CceEEeeccc
Confidence                01111 12 8999999999755577888888886 7666666543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=84.58  E-value=0.34  Score=41.00  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=30.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      -++|||+|+ |.+|...+..+...|. +|++++++..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~   38 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVREST   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCc
Confidence            367999998 9999999999999999 9999998653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.54  E-value=1.1  Score=35.80  Aligned_cols=98  Identities=10%  Similarity=0.076  Sum_probs=58.7

Q ss_pred             HHHHhC-CCCCCEEEEECC--ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHH
Q 017335          194 AWKVAG-VEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVS  263 (373)
Q Consensus       194 ~~~~~~-~~~~~~VlI~G~--G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~  263 (373)
                      ++.... ...|.+||=+.+  |++|+.++    ..|+..|+.++.+.+..+.+++    ++..   +++..      +..
T Consensus        32 lFn~l~~~~~~~~vLDlfaGsG~~g~ea~----srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~------D~~  101 (182)
T d2fhpa1          32 IFNMIGPYFDGGMALDLYSGSGGLAIEAV----SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM------DAN  101 (182)
T ss_dssp             HHHHHCSCCSSCEEEETTCTTCHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES------CHH
T ss_pred             HHHHHHHhcCCCEEEEcccccccccceee----ecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccc------cch
Confidence            444433 457889988844  66666433    3778799999999988777653    4532   24432      344


Q ss_pred             HHHHHhc-CC-CccEEEECCC-C----HHHHHHHHH--HhccCCceEE
Q 017335          264 QVIKEMT-DG-GADYCFECIG-L----TSVMNDAFN--SSREGWGKTV  302 (373)
Q Consensus       264 ~~i~~~~-~~-~~d~vid~~g-~----~~~~~~~~~--~l~~~~G~~v  302 (373)
                      +.+..+. .+ .||+||-... .    ...++.+.+  .|+++ |.++
T Consensus       102 ~~l~~~~~~~~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~-giIi  148 (182)
T d2fhpa1         102 RALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNE-AVIV  148 (182)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             hhhhhhcccCCCcceEEechhhhhhHHHHHHHHHHHCCCCCCC-EEEE
Confidence            4454432 23 7999994321 1    223444443  47885 7665

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.41  E-value=0.48  Score=38.97  Aligned_cols=32  Identities=25%  Similarity=0.214  Sum_probs=28.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      -|+|+|+|+.|+.++..+..+|. +|.+++..+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            47899999999999999999999 899998654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.23  E-value=0.45  Score=38.07  Aligned_cols=33  Identities=18%  Similarity=0.071  Sum_probs=28.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      ...|+|+|+|+.|+.++..+...|. ++++++..
T Consensus         5 ~~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           5 NTRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             cceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            3579999999999999999999999 78888743

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.17  E-value=0.67  Score=35.63  Aligned_cols=70  Identities=17%  Similarity=0.203  Sum_probs=45.6

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcC-Cc-----eEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFG-IT-----DFINPATCGDKTVSQVIKEMTDGGAD  275 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lg-a~-----~vi~~~~~~~~~~~~~i~~~~~~~~d  275 (373)
                      .+|.|+|+ |.+|...+.++...+. ++++.++.++.+.+.+ .+- +.     ..+.. .   .++.+.+     .+.|
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~~~~~~~~~~~~~-~---~~~~~~~-----~~aD   70 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSHIETRATVKGYLG-P---EQLPDCL-----KGCD   70 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTTSSSSCEEEEEES-G---GGHHHHH-----TTCS
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhhhhhhcCCCeEEc-C---CChHHHh-----CCCC
Confidence            36899997 9999999999998884 6899999876554333 321 11     11111 1   2333322     2799


Q ss_pred             EEEECCCC
Q 017335          276 YCFECIGL  283 (373)
Q Consensus       276 ~vid~~g~  283 (373)
                      +|+-+.|.
T Consensus        71 ivVitag~   78 (144)
T d1mlda1          71 VVVIPAGV   78 (144)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCc
Confidence            99998884

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.04  E-value=3.9  Score=31.78  Aligned_cols=91  Identities=11%  Similarity=0.034  Sum_probs=52.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCC--CC-eEEEEcCChh---------------HHHHHHHcCCceEEcCCCCCCccHHHHH
Q 017335          205 TVAIFGLGAVGLAVAEGARLNR--AS-KIIGVDINPE---------------KFEIGKKFGITDFINPATCGDKTVSQVI  266 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G--~~-~Vi~~~~~~~---------------~~~~~~~lga~~vi~~~~~~~~~~~~~i  266 (373)
                      +|.|+|.|.+|...++++....  .+ +|.++..+..               ..+.......      ..   .......
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~---~~~~~~~   76 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT------KT---LPLDDLI   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC------BC---CCHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhccc------cc---ccHHHHH
Confidence            5788899999999988777543  21 5555443211               1111111111      00   1111111


Q ss_pred             HHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335          267 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG  305 (373)
Q Consensus       267 ~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G  305 (373)
                      ...... ..++++||+++........++|..| =.+|...
T Consensus        77 ~~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTAN  115 (168)
T d1ebfa1          77 AHLKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATPN  115 (168)
T ss_dssp             HHHTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECCC
T ss_pred             HHhccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEecC
Confidence            122223 6789999999999777888889996 6777653

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=83.97  E-value=0.44  Score=38.89  Aligned_cols=31  Identities=26%  Similarity=0.155  Sum_probs=28.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      .++|+|+|+.|+.++..+..+|. +|.+++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47899999999999999999999 99999865

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.90  E-value=0.39  Score=41.59  Aligned_cols=33  Identities=18%  Similarity=0.262  Sum_probs=29.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  238 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~  238 (373)
                      .|+|+|+|..|+.++..+...|. +|.+++.++.
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRNH   35 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCCC
Confidence            48999999999999999988898 9999997653

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.85  E-value=0.63  Score=40.23  Aligned_cols=33  Identities=30%  Similarity=0.276  Sum_probs=30.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      .|.+|+|.|.|.+|..+++++...|+ +|++++.
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGE   67 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEc
Confidence            57899999999999999999999999 8988764

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.79  E-value=0.94  Score=36.50  Aligned_cols=69  Identities=19%  Similarity=0.280  Sum_probs=42.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      ++|||+|+ |.+|...+..+...|. .+|+++.+++...       -..+ ....   .++.+. .+...+.+|.|+.|.
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~~-~~~~---~d~~~~-~~~~~~~~d~vi~~~   70 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPRL-DNPV---GPLAEL-LPQLDGSIDTAFCCL   70 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTTE-ECCB---SCHHHH-GGGCCSCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------cccc-cccc---cchhhh-hhccccchheeeeee
Confidence            68999999 9999999998888885 2677666543210       0111 1111   233332 223334789999998


Q ss_pred             CCH
Q 017335          282 GLT  284 (373)
Q Consensus       282 g~~  284 (373)
                      |..
T Consensus        71 g~~   73 (212)
T d2a35a1          71 GTT   73 (212)
T ss_dssp             CCC
T ss_pred             eee
Confidence            763

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.37  E-value=0.75  Score=36.92  Aligned_cols=86  Identities=13%  Similarity=0.086  Sum_probs=57.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335          202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  281 (373)
Q Consensus       202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~  281 (373)
                      .+.+|.|+|.|.+|...+++++.+|. +|++.++......       ......     .++.+.++     ..|+|..+.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~-------~~~~~~-----~~l~ell~-----~sDii~i~~  104 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLPL-------GNATQV-----QHLSDLLN-----MSDVVSLHV  104 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCCC-------TTCEEC-----SCHHHHHH-----HCSEEEECC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccchh-------hhhhhh-----hhHHHHHh-----hccceeecc
Confidence            47899999999999999999999999 9999997543210       011111     12332222     368888765


Q ss_pred             CCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335          282 GLTS-----VMNDAFNSSREGWGKTVILGV  306 (373)
Q Consensus       282 g~~~-----~~~~~~~~l~~~~G~~v~~G~  306 (373)
                      .-..     .=...++.++++ ..+|..+.
T Consensus       105 plt~~T~~li~~~~l~~mk~~-a~lIN~aR  133 (188)
T d1sc6a1         105 PENPSTKNMMGAKEISLMKPG-SLLINASR  133 (188)
T ss_dssp             CSSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             cCCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence            5221     124677888886 88888764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.14  E-value=0.55  Score=40.37  Aligned_cols=32  Identities=31%  Similarity=0.489  Sum_probs=28.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      -|+|+|+|..|+.++.-|...|. +|++++..+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            47999999999999999999999 899999754

>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: RNA methyltransferase FtsJ
domain: RNA methyltransferase FtsJ
species: Escherichia coli [TaxId: 562]

Probab=83.00  E-value=2.9  Score=33.08  Aligned_cols=97  Identities=19%  Similarity=0.193  Sum_probs=55.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEE
Q 017335          200 VEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC  277 (373)
Q Consensus       200 ~~~~~~VlI~G~G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~v  277 (373)
                      ++++.+||=+|+++ |-+.--+++. ....+|++++..+-+     .......+..+- .+......+...... ++|+|
T Consensus        20 ~k~~~~vlDLg~aP-Ggw~q~~~~~~~~~~~v~~vDl~~~~-----~i~~~~~~~~d~-~~~~~~~~~~~~~~~~~~DlV   92 (180)
T d1ej0a_          20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLPMD-----PIVGVDFLQGDF-RDELVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSCCC-----CCTTEEEEESCT-TSHHHHHHHHHHHTTCCEEEE
T ss_pred             cCCCCeEEEEeccC-CcceEEEEeeccccceEEEeeccccc-----ccCCceEeeccc-ccchhhhhhhhhccCcceeEE
Confidence            68999999998844 3232223333 233489999866522     122223333332 233444444444444 89999


Q ss_pred             EE-----CCCCHH------------HHHHHHHHhccCCceEEEE
Q 017335          278 FE-----CIGLTS------------VMNDAFNSSREGWGKTVIL  304 (373)
Q Consensus       278 id-----~~g~~~------------~~~~~~~~l~~~~G~~v~~  304 (373)
                      +.     ++|...            .+..+.+.|++| |.++.=
T Consensus        93 lSD~ap~~sg~~~~d~~~~~~L~~~~l~~a~~~Lk~g-G~fV~K  135 (180)
T d1ej0a_          93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVK  135 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EecccchhcccchhHHHHHHHHHHHHHHhhhhccCCC-CcEEEE
Confidence            83     344322            356678889997 998854

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=83.00  E-value=4.2  Score=36.23  Aligned_cols=56  Identities=23%  Similarity=0.169  Sum_probs=41.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINP  254 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~  254 (373)
                      +++++.+|+-..+|..|++.+.+++.+|.+-++++..  +++|.+.++.+||+-++..
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~  197 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDP  197 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecC
Confidence            4677877655566999999999999999954444433  4477888899999766544

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=82.93  E-value=0.57  Score=39.55  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=27.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      -|+|+|+|.+|+.++.-+...|. +|+++++.
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            38999999999998888888999 89999874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=82.85  E-value=0.98  Score=38.23  Aligned_cols=34  Identities=32%  Similarity=0.328  Sum_probs=30.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      -.|.+|+|.|.|.+|..+++++...|+ +|+++..
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLSG   67 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEec
Confidence            468899999999999999999999999 8887753

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=82.58  E-value=1.2  Score=35.49  Aligned_cols=84  Identities=13%  Similarity=0.074  Sum_probs=49.6

Q ss_pred             CCCEEEEE--CCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc---eEEcCCCCCCccHHHHHHHhcCC
Q 017335          202 VGSTVAIF--GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT---DFINPATCGDKTVSQVIKEMTDG  272 (373)
Q Consensus       202 ~~~~VlI~--G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~---~vi~~~~~~~~~~~~~i~~~~~~  272 (373)
                      .+.+||=+  |.|++|+-|+    ..|++.|+.++.+.+..+.++    .++..   ..+..     .+..+.+......
T Consensus        43 ~~~~vLDlFaGsG~~glEal----SRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~-----~d~~~~l~~~~~~  113 (183)
T d2ifta1          43 HQSECLDGFAGSGSLGFEAL----SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVIN-----QSSLDFLKQPQNQ  113 (183)
T ss_dssp             TTCEEEETTCTTCHHHHHHH----HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEEC-----SCHHHHTTSCCSS
T ss_pred             ccceEeecccCccceeeeee----eecceeeEEeecccchhhhHhhHHhhhccccccccccc-----ccccccccccccC
Confidence            56678777  5577777554    688889999999998776664    45532   22222     2333333333333


Q ss_pred             -CccEEE-ECCCCHHHHHHHHHHh
Q 017335          273 -GADYCF-ECIGLTSVMNDAFNSS  294 (373)
Q Consensus       273 -~~d~vi-d~~g~~~~~~~~~~~l  294 (373)
                       .||+|| |-.-.......++..+
T Consensus       114 ~~fDlIFlDPPY~~~~~~~~l~~l  137 (183)
T d2ifta1         114 PHFDVVFLDPPFHFNLAEQAISLL  137 (183)
T ss_dssp             CCEEEEEECCCSSSCHHHHHHHHH
T ss_pred             CcccEEEechhHhhhhHHHHHHHH
Confidence             699999 5443322244444433

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.50  E-value=0.63  Score=37.70  Aligned_cols=30  Identities=30%  Similarity=0.256  Sum_probs=27.3

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      |+|+|+|+.|+.++..+..+|. +|.+++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7888999999999999999999 89999864

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.50  E-value=0.62  Score=39.84  Aligned_cols=33  Identities=27%  Similarity=0.398  Sum_probs=26.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      .|+|+|+|.+|++++.-+...|.++|.++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            589999999999877766677875799998753

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=82.44  E-value=0.56  Score=37.99  Aligned_cols=30  Identities=20%  Similarity=0.163  Sum_probs=27.1

Q ss_pred             EEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      |+|+|+|+-|+.++..|...|. +|.+++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999999 89999864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.33  E-value=1.1  Score=38.84  Aligned_cols=33  Identities=24%  Similarity=0.292  Sum_probs=29.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      ..++|||+|+ |-+|...+..+...|. +|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            4578999998 9999999999999999 9999975

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.88  E-value=2.6  Score=36.45  Aligned_cols=31  Identities=16%  Similarity=0.042  Sum_probs=27.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      ++|||+|+ |-+|...+..+...|. +|+++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEEC
Confidence            68999998 9999999999989998 9999863

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=81.61  E-value=7.2  Score=34.02  Aligned_cols=106  Identities=14%  Similarity=0.122  Sum_probs=66.9

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHH-HHCCCCeEEEEcCChhHHHHH-HHcCC---ceEEcCCCCCCccHHHHHHHhcCCC
Q 017335          199 GVEVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTDGG  273 (373)
Q Consensus       199 ~~~~~~~VlI~G~G~vG~~a~~la-~~~G~~~Vi~~~~~~~~~~~~-~~lga---~~vi~~~~~~~~~~~~~i~~~~~~~  273 (373)
                      .-+...++.|+|+|..+...++.. ...++++|.+.++++++.+.+ +++..   ..+...     .+..+.+     .+
T Consensus       124 A~~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~-----~s~~eav-----~~  193 (340)
T d1x7da_         124 ARPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA-----SSVAEAV-----KG  193 (340)
T ss_dssp             SCTTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC-----SSHHHHH-----TT
T ss_pred             hccCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec-----CCHHHHH-----hc
Confidence            334567899999999888766644 567888999999998776544 33321   122222     2333333     27


Q ss_pred             ccEEEECCCCH---HHHHHHHHHhccCCceEEEEcccCCCCccccCHH
Q 017335          274 ADYCFECIGLT---SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI  318 (373)
Q Consensus       274 ~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~  318 (373)
                      +|+|+-|+.+.   ..+.  .+.+++| -.+..+|..... .-+++..
T Consensus       194 ADIi~t~Tas~s~~Pv~~--~~~l~pG-~hI~aiGs~~p~-~~Eld~~  237 (340)
T d1x7da_         194 VDIITTVTADKAYATIIT--PDMLEPG-MHLNAVGGDCPG-KTELHAD  237 (340)
T ss_dssp             CSEEEECCCCSSEEEEEC--GGGCCTT-CEEEECSCCBTT-BEEECHH
T ss_pred             CCceeeccccCCCCcccc--hhhcCCC-CEEeecccchhh-hhccCHH
Confidence            89999877542   1122  2578996 888899875443 2355554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.27  E-value=0.84  Score=39.40  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=28.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      ++|||+|+ |-+|...+..+...|. +|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            58999998 9999999999888999 9999875

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=81.20  E-value=0.74  Score=38.77  Aligned_cols=30  Identities=23%  Similarity=0.516  Sum_probs=23.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      +|||+|+ |-+|...+..+...|  .++++++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECC
Confidence            5899998 999999988887777  56666644

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.14  E-value=0.75  Score=40.11  Aligned_cols=35  Identities=23%  Similarity=0.357  Sum_probs=27.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChh
Q 017335          204 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPE  238 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~  238 (373)
                      ++|+|+|+|..|++++..++..|. .+|++.++++.
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            589999999999988866655442 28999998753

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=80.90  E-value=2.3  Score=36.93  Aligned_cols=103  Identities=14%  Similarity=0.062  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcCCCC---------------------
Q 017335          201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATC---------------------  257 (373)
Q Consensus       201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~~~~---------------------  257 (373)
                      .+..+|+...+|..|.+++..++..|..-++.+..  +.+|.+.++.+|++-++.....                     
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            34556666677889999999999999954444333  4467888888998655433221                     


Q ss_pred             -CCc-------cHHHHHHHhcCCCccEEEECCCCHHHHHHHHH---HhccCCceEEEEc
Q 017335          258 -GDK-------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFN---SSREGWGKTVILG  305 (373)
Q Consensus       258 -~~~-------~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~---~l~~~~G~~v~~G  305 (373)
                       .+.       .+..++.+.. +.+|.||-++|+..++.-+..   .+.+. -+++.+.
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve  209 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVE  209 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEec
Confidence             001       1112222221 268999988887665554444   44454 6766653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.69  E-value=0.75  Score=40.05  Aligned_cols=32  Identities=25%  Similarity=0.220  Sum_probs=28.3

Q ss_pred             EE-EEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335          205 TV-AIFGL-GAVGLAVAEGARLNRASKIIGVDINP  237 (373)
Q Consensus       205 ~V-lI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~  237 (373)
                      +| ||+|+ |-+|...+..+...|+ +|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            46 99998 9999999999988999 999999854

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=80.68  E-value=1.7  Score=38.25  Aligned_cols=31  Identities=26%  Similarity=0.365  Sum_probs=26.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 017335          205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  235 (373)
Q Consensus       205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~  235 (373)
                      +|||+|+ |-+|...+..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999998 999999999888889855677764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.60  E-value=2.5  Score=31.19  Aligned_cols=83  Identities=14%  Similarity=0.111  Sum_probs=46.7

Q ss_pred             CCEEEEECCCh--HH---------HHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC
Q 017335          203 GSTVAIFGLGA--VG---------LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD  271 (373)
Q Consensus       203 ~~~VlI~G~G~--vG---------~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~  271 (373)
                      .++|||+|+|+  +|         ..++..+|..|+ +++.+..+++.-..-.. =+++++-.-- . .+.   +.+...
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d-~aD~lYfepl-t-~e~---v~~Ii~   76 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYD-TSDRLYFEPV-T-LED---VLEIVR   76 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTT-SSSEEECCCC-S-HHH---HHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChh-hcCceEEccC-C-HHH---HHHHHH
Confidence            46899999874  33         445666677899 89999988876532111 1444432111 0 122   222222


Q ss_pred             C-CccEEEECCCCHHHHHHHHH
Q 017335          272 G-GADYCFECIGLTSVMNDAFN  292 (373)
Q Consensus       272 ~-~~d~vid~~g~~~~~~~~~~  292 (373)
                      . +.|.|+-..|+...++.+.+
T Consensus        77 ~E~p~~ii~~~GGQtalnla~~   98 (121)
T d1a9xa4          77 IEKPKGVIVQYGGQTPLKLARA   98 (121)
T ss_dssp             HHCCSEEECSSSTHHHHTTHHH
T ss_pred             HhCCCEEEeehhhhhHHHHHHH
Confidence            2 56777777777664444444

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=80.15  E-value=2  Score=35.99  Aligned_cols=71  Identities=17%  Similarity=0.189  Sum_probs=41.7

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCCCeEEEEcC--ChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECC
Q 017335          206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECI  281 (373)
Q Consensus       206 VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~--~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~  281 (373)
                      |||+|+ |-+|...+..+...|..+|+++++  +..+.....+......++.     .++...+.....- .+++|+-+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK-----EDFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH-----HHHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc-----hHHHHHHhhhhcccchhhhhhhc
Confidence            799998 999999988888889757888863  2233333444433333322     2333333332222 677777554

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.14  E-value=0.69  Score=37.91  Aligned_cols=31  Identities=32%  Similarity=0.380  Sum_probs=27.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335          205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  236 (373)
Q Consensus       205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~  236 (373)
                      -|+|+|+|+-|+.++..|..+|. +|.+++..
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~-kV~viE~~   35 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDK-KVMVLDFV   35 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCC-CEEEECCC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            47899999999999999999999 89999843

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.06  E-value=0.86  Score=37.22  Aligned_cols=34  Identities=18%  Similarity=0.215  Sum_probs=27.6

Q ss_pred             CEEEEECCChHHHHHHHHHHH--CCCCeEEEEcCChh
Q 017335          204 STVAIFGLGAVGLAVAEGARL--NRASKIIGVDINPE  238 (373)
Q Consensus       204 ~~VlI~G~G~vG~~a~~la~~--~G~~~Vi~~~~~~~  238 (373)
                      .+|+|+|+|+.|+.+++.++.  .|. +|.+++..+.
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            379999999999999886654  467 8999987754